Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0675
(675 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49462| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_11455| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.49
SB_35600| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_38582| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_23120| Best HMM Match : Mucin (HMM E-Value=0.033) 29 4.5
SB_33292| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_11708| Best HMM Match : Kunitz_BPTI (HMM E-Value=7.2) 28 7.9
>SB_49462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 659
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 76 NNNYNDWEKGKCRYKRYKISNKSIINTTGEKDHH 177
NN+Y W + +C Y+R IS +S N +K H
Sbjct: 588 NNDYEGWRRPRCGYRRSGISGESHENRKNKKKEH 621
>SB_11455| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 217
Score = 31.9 bits (69), Expect = 0.49
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Frame = +1
Query: 367 NKYYLGSYNFRQVANSLHYFLHIYLAMNLANQPTASFEQEKNMTFIN---WNPFQVI*IK 537
N+ Y+ + + QV HY+ +Y+ + +NQ + N +I+ WN QV +K
Sbjct: 109 NQVYIDKHYWNQVYIDKHYWNQVYIDKHYSNQVYID-KHYSNQVYIDKHYWN--QVYIVK 165
Query: 538 S*DNRVYLLQ--*NVIYLDTTH-PQIMVLENNW 627
N+VY+ + N +Y+D + Q+ + ++ W
Sbjct: 166 HHSNQVYIDKHYSNQVYIDKHYWNQVYIDKHYW 198
Score = 28.7 bits (61), Expect = 4.5
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Frame = +1
Query: 367 NKYYLGSYNFRQVANSLHYFLHIYLAMNLANQPTASFEQEKNMTFINWN-PFQVI*IKS* 543
N+ Y+G + + QV HY+ +Y+ + +NQ E N +I+ + QV K
Sbjct: 39 NQVYIGKHYWNQVYIDKHYWNQVYIDKHYSNQVYID-EHYWNQVYIDKHYSNQVYIDKHY 97
Query: 544 DNRVYLLQ--*NVIYLDTTH-PQIMVLENNW 627
N+VY+ + N +Y+D + Q+ + ++ W
Sbjct: 98 WNQVYIDKHYWNQVYIDKHYWNQVYIDKHYW 128
Score = 27.9 bits (59), Expect = 7.9
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Frame = +1
Query: 367 NKYYLGSYNFRQVANSLHYFLHIYLAMNLANQPTASFEQEKNMTFIN---WNPFQVI*IK 537
N+ Y+ + + QV HY +Y+ + +NQ + N +I+ WN QV K
Sbjct: 9 NQVYIDKHYWNQVYIDKHYSNQVYIDKHYSNQVYIG-KHYWNQVYIDKHYWN--QVYIDK 65
Query: 538 S*DNRVYLLQ--*NVIYLDTTHP-QIMVLENNW 627
N+VY+ + N +Y+D + Q+ + ++ W
Sbjct: 66 HYSNQVYIDEHYWNQVYIDKHYSNQVYIDKHYW 98
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Frame = +1
Query: 367 NKYYLGSYNFRQVANSLHYFLHIYLAMNLANQPTASFEQEKNMTFINWNPFQVI*IKS*D 546
N+ Y+ + + QV HY +Y+ + +NQ + + + QV K
Sbjct: 119 NQVYIDKHYWNQVYIDKHYSNQVYIDKHYSNQVYIDKHYWNQVYIVKHHSNQVYIDKHYS 178
Query: 547 NRVYLLQ--*NVIYLDTTH-PQIMVLENNW 627
N+VY+ + N +Y+D + Q+ + ++ W
Sbjct: 179 NQVYIDKHYWNQVYIDKHYWNQVYIDKHYW 208
>SB_35600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 305
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 76 NNNYNDWEKGKCRYKRYKISNKSIINTTGEKDHH 177
NN+Y W + YKR IS +S N +K H
Sbjct: 245 NNDYEGWRSPRSGYKRSGISGESHENRKNKKKEH 278
>SB_38582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1438
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 73 HNNNYNDWEKGKCRYKRYKISNKSIINTTGEKDHHVCISIYSEY 204
+NNN N K CR Y + + I T K +V I ++SEY
Sbjct: 113 NNNNNNSSIKNGCR--EYTSNRDNTIQDTTLKSAYVVIPVFSEY 154
>SB_23120| Best HMM Match : Mucin (HMM E-Value=0.033)
Length = 382
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 73 HNNNYNDWEKGKCRYKRYKISNKSIINTTGEKDHHVCISIYSEY 204
+NNN N K CR Y + + I T K +V I ++SEY
Sbjct: 235 NNNNNNSSIKNGCR--EYTSNRDNTIQDTTLKSAYVVIPVFSEY 276
>SB_33292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 896
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 46 NFKCDSLP*HNNNYNDWEKGKC-RYKRYKISNKSIINTT 159
N +CD+ P NN + E G R+ R K+ N + N T
Sbjct: 68 NIQCDTQPSDKNNIGETETGPTRRHLRAKVPNVIVSNVT 106
>SB_11708| Best HMM Match : Kunitz_BPTI (HMM E-Value=7.2)
Length = 156
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +2
Query: 44 KILNVTHCPNTTIIIMIGRRG 106
K++N+T+CP T ++ + RRG
Sbjct: 73 KMVNITYCPKTKVLCLWYRRG 93
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,811,025
Number of Sequences: 59808
Number of extensions: 347936
Number of successful extensions: 708
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 690
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1733301648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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