Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0670
         (765 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.5  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   8.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.2  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   8.2  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
 Frame = +2

Query: 293 DGPELDSESKKAASVTPKHTPVKRMSLPSPGSTPFPNK-SSQKERLLNITRSIEKSRRSS 469
           +G E D+ S    S      P +  + P+PG  P P+   S  E  LN  R +  SR +S
Sbjct: 29  EGDE-DTGSMTPNSAASPAPPEEEAASPTPGDVPTPSSPRSISEDPLN-CRDLPNSRCNS 86


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 546 LLTENSWVINWTANITFVVL 487
           L+  N++ + WT  + FVVL
Sbjct: 110 LVVANAFFLLWTPAVIFVVL 129


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 434 YLIIFLFVSSYLEMVWI 384
           YLII     +YLE  WI
Sbjct: 78  YLIILFADFAYLETTWI 94


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 434 YLIIFLFVSSYLEMVWI 384
           YLII     +YLE  WI
Sbjct: 96  YLIILFADFAYLETTWI 112


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,798
Number of Sequences: 336
Number of extensions: 2874
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)