Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0669
(489 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35062| Best HMM Match : IATP (HMM E-Value=1.7) 91 5e-19
SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 3e-09
SB_40923| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.29) 39 0.002
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 35 0.041
SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09) 34 0.072
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.096
SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012) 33 0.13
SB_30512| Best HMM Match : GLTT (HMM E-Value=0.00058) 33 0.13
SB_54691| Best HMM Match : SWIRM (HMM E-Value=0.0033) 32 0.22
SB_20508| Best HMM Match : Filament (HMM E-Value=0.037) 32 0.29
SB_20161| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.29
SB_5816| Best HMM Match : RVT_1 (HMM E-Value=3e-16) 31 0.67
SB_43087| Best HMM Match : Ribosomal_S25 (HMM E-Value=3.2) 31 0.67
SB_27802| Best HMM Match : Filament (HMM E-Value=0.2) 30 1.2
SB_52092| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_45286| Best HMM Match : GRIP (HMM E-Value=3.6e-08) 30 1.2
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_25234| Best HMM Match : SMC_hinge (HMM E-Value=3.7e-28) 29 1.6
SB_12264| Best HMM Match : Filament (HMM E-Value=0.0075) 29 1.6
SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11) 29 1.6
SB_2495| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.2e-11) 29 1.6
SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_23774| Best HMM Match : Kinesin (HMM E-Value=0) 29 2.1
SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_16761| Best HMM Match : PDZ (HMM E-Value=1.6e-08) 29 2.7
SB_16649| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_9721| Best HMM Match : Filament (HMM E-Value=0.2) 29 2.7
SB_48940| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07) 29 2.7
SB_35536| Best HMM Match : zf-C2H2 (HMM E-Value=0.0069) 29 2.7
SB_33073| Best HMM Match : Protamine_P1 (HMM E-Value=1.5) 29 2.7
SB_30233| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19) 29 2.7
SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016) 29 2.7
SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.6
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 28 3.6
SB_37872| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.6
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.6
SB_10610| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.6
SB_1658| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.16) 28 3.6
SB_49818| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10) 28 4.7
SB_40853| Best HMM Match : BTB (HMM E-Value=1.4e-17) 28 4.7
SB_20162| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_41916| Best HMM Match : DUF164 (HMM E-Value=0.8) 27 6.3
SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05) 27 6.3
SB_21939| Best HMM Match : F-box (HMM E-Value=0.001) 27 6.3
SB_39125| Best HMM Match : DUF164 (HMM E-Value=0.082) 27 6.3
SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.3
SB_12753| Best HMM Match : M (HMM E-Value=0.0006) 27 6.3
SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098) 27 8.3
SB_27760| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_17486| Best HMM Match : CheR (HMM E-Value=3.2) 27 8.3
SB_4107| Best HMM Match : M (HMM E-Value=8e-22) 27 8.3
>SB_35062| Best HMM Match : IATP (HMM E-Value=1.7)
Length = 223
Score = 91.1 bits (216), Expect = 5e-19
Identities = 44/77 (57%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Frame = +2
Query: 248 AREDA-LQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHELQDA 424
A+E A LQ+LNDRLA YID+V+ LE ENS LR E+ +++ V REV ++K +YE EL DA
Sbjct: 133 AQEKAELQHLNDRLATYIDRVKNLEQENSKLRSEVTVSRKTVEREVDSMKSLYETELADA 192
Query: 425 RKLLDDTSREKAKLEID 475
R+LLD+T++EKAK +I+
Sbjct: 193 RRLLDETAKEKAKQQIE 209
>SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 58.4 bits (135), Expect = 3e-09
Identities = 28/78 (35%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Frame = +2
Query: 245 FAREDALQNLNDRLAAYIDKVRQLESENSGLRREIQ--TTQEVVTREVSNIKGMYEHELQ 418
+ +D LQ+LNDR A YI +VRQ+ E++G I T +++ E+ +K MYE +L+
Sbjct: 12 YLEKDHLQSLNDRFANYISRVRQMR-EHNGRNETINFINTTKILEEEILALKAMYERQLE 70
Query: 419 DARKLLDDTSREKAKLEI 472
+ R LDD +R++ + ++
Sbjct: 71 ELRSKLDDVARDRTQQQM 88
>SB_40923| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.29)
Length = 690
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/77 (24%), Positives = 43/77 (55%)
Frame = +2
Query: 233 QAKPFAREDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHE 412
QAK + L+N +++ +K++ LE +NS + E + + E+ +K +E E
Sbjct: 441 QAKYTSMLKDLKNERNKIIELEEKLKALEEQNSQRQEEYDSNKSTHENELLVLKAKHEEE 500
Query: 413 LQDARKLLDDTSREKAK 463
L++ ++ L++ +EK++
Sbjct: 501 LKETKQQLEELEKEKSE 517
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 34.7 bits (76), Expect = 0.041
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 10/88 (11%)
Frame = +2
Query: 251 REDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIK----------GM 400
R AL + ND L + ++ V+Q E +R++Q V T E+ +K G
Sbjct: 1692 RMSALASENDHLNSELEMVKQSHQEMEKEKRKLQEKLRVTTDELIRLKPVSEATQKKKGQ 1751
Query: 401 YEHELQDARKLLDDTSREKAKLEIDLKR 484
E ELQ+ARK L + K E +L +
Sbjct: 1752 VETELQNARKRLATLETTERKSEEELAK 1779
Score = 29.5 bits (63), Expect = 1.6
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +2
Query: 302 KVRQLESENSGLRREIQTTQEVVTREVSNIKGMYE--HELQDARKLLDDTSREKAK 463
KV Q SEN L ++ ++ +T NIK + E + LQ+ K L+D + E K
Sbjct: 3047 KVSQKNSENELLHAQLDDLRKQITGYQGNIKSLEENSNRLQERIKDLEDENLESHK 3102
>SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09)
Length = 1998
Score = 33.9 bits (74), Expect = 0.072
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 15/82 (18%)
Frame = +2
Query: 266 QNLNDRLAA----YIDKVRQLESENSGL-----------RREIQTTQEVVTREVSNIKGM 400
+ +N+RLA ++VR+L+ EN L RRE +E RE N++
Sbjct: 1798 EEMNNRLAREKKPLEEEVRELQEENEELKNQRWEMKVHFRREKVKLEEEFEREKENLETQ 1857
Query: 401 YEHELQDARKLLDDTSREKAKL 466
++ E ++ R+ L+D +++KAK+
Sbjct: 1858 FDAEREEFRRRLEDRAQQKAKI 1879
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 33.5 bits (73), Expect = 0.096
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Frame = +2
Query: 233 QAKPFAREDALQNLNDRLAAYIDKVRQLESE-NSGLRR--EIQTTQEVVTREVSNIKGMY 403
+A+ +D ++LND+L K+ +LES+ N +R E++ + +E+ + Y
Sbjct: 774 EAESKLADDKRKDLNDQLVGCHGKISKLESQLNVANQRKFELEKALDEANKELKPLSDKY 833
Query: 404 EHELQD---ARKLLDDTSREKAKLEIDL 478
+ +D +K LDDT A E+ L
Sbjct: 834 DRASRDLDILQKTLDDTQSRLANAEMTL 861
>SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012)
Length = 1148
Score = 33.1 bits (72), Expect = 0.13
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Frame = +2
Query: 254 EDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEH------EL 415
+D + LN + + + +++LE+ENSGL + E +EV +KG+ E EL
Sbjct: 593 QDMVAKLNITIKSQKETMKKLETENSGLAASL----EKECKEVERLKGVDEEIVNIKIEL 648
Query: 416 QDARKLLDDTSREKAKLE 469
D + L +TS E K +
Sbjct: 649 NDVQIKLRETSMELGKTQ 666
>SB_30512| Best HMM Match : GLTT (HMM E-Value=0.00058)
Length = 1083
Score = 33.1 bits (72), Expect = 0.13
Identities = 19/63 (30%), Positives = 33/63 (52%)
Frame = +2
Query: 299 DKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHELQDARKLLDDTSREKAKLEIDL 478
+K + LE EN+ LR+ + TQE V + N + E E Q + + D + ++ E +L
Sbjct: 284 EKYKLLEKENADLRQSVSETQE-VANSLQNRNSLLEREKQSLEENIQDLNVKQVVFE-EL 341
Query: 479 KRL 487
K +
Sbjct: 342 KNV 344
>SB_54691| Best HMM Match : SWIRM (HMM E-Value=0.0033)
Length = 809
Score = 32.3 bits (70), Expect = 0.22
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Frame = +2
Query: 254 EDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEH------EL 415
+D + LN + + + +++LE+ENSGL E +EV +KG+ E EL
Sbjct: 666 QDMVAKLNITIKSQKETMKKLETENSGLAASF----EKECKEVERLKGVDEEIVNIKIEL 721
Query: 416 QDARKLLDDTSREKAKLE 469
D + L +TS E K +
Sbjct: 722 NDVQIKLRETSMELGKTQ 739
>SB_20508| Best HMM Match : Filament (HMM E-Value=0.037)
Length = 722
Score = 31.9 bits (69), Expect = 0.29
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = +2
Query: 227 SYQAKPFARE-DALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMY 403
S Q ARE +AL+ L D A D + E EN+ + E T + + + S + +
Sbjct: 409 SSQIAKLARELEALKILQDSTAKERDFYK--EHENAQ-QSETSTFKTQLVEQTSQLHAIT 465
Query: 404 EHELQDARKLLDDTSREKAKLEIDLKRL 487
+ EL + LL+ T++EK LE+ K L
Sbjct: 466 Q-ELASLKTLLETTAKEKETLEVSEKNL 492
>SB_20161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 475
Score = 31.9 bits (69), Expect = 0.29
Identities = 20/75 (26%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = +2
Query: 263 LQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHELQDARKLLDD 442
L+ + +A + +LESE L+ E+Q + E ++ + I + + + ++L D+
Sbjct: 111 LRGRENEIAELKTSIGRLESELRSLKSELQNSSEKISEDEHEISQLKNDKARCMQELRDE 170
Query: 443 TSREKA-KLEIDLKR 484
REK+ KL +DL++
Sbjct: 171 --REKSNKLVVDLQK 183
>SB_5816| Best HMM Match : RVT_1 (HMM E-Value=3e-16)
Length = 904
Score = 30.7 bits (66), Expect = 0.67
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -3
Query: 166 DCSGLCSDDTTLAFDEDVTVFL-VFVYLVGYIFVTITNFDTQ*CIF 32
D +GL SD+ + DED++ L VF L G + + I + DT C F
Sbjct: 25 DKTGLSSDELRVLDDEDLSALLTVFKALYGDVDLRILDLDTTVCRF 70
>SB_43087| Best HMM Match : Ribosomal_S25 (HMM E-Value=3.2)
Length = 134
Score = 30.7 bits (66), Expect = 0.67
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Frame = +2
Query: 257 DALQNLNDRLAAYIDKVRQLESENSGLR-REIQTTQEVVTREVSNI---KGMYEHELQDA 424
+ ++ L D LA + R+ ++ + ++ +EV T + + + E ELQ
Sbjct: 36 EEIECLKDELATRTELTRRARDTAERMKGKMLEAKEEVGTEQQNKLDISSASTEEELQKT 95
Query: 425 RKLLDDTSREKAKLEIDLK 481
RK DD REK ++ +LK
Sbjct: 96 RKERDDMRREKDQIISELK 114
>SB_27802| Best HMM Match : Filament (HMM E-Value=0.2)
Length = 528
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 404 EHELQDARKLLDDTSREKAKLEIDLK 481
EHE Q+ KLL+D +E +KL+ LK
Sbjct: 51 EHEKQNLTKLLEDAQKEVSKLKSSLK 76
>SB_52092| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 29.9 bits (64), Expect = 1.2
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Frame = +2
Query: 206 SSKQST*SYQAKPFAREDALQN-----LNDRLAAYIDKVRQLESENSGLRREIQTTQEVV 370
+S++ S +P R+ A N L +LAA + L E + LR+E+ TT++ +
Sbjct: 141 ASQEGMPSVSLEPLQRDMARMNNSIFSLQQQLAAKESNISLLTRELASLRKELHTTRQFI 200
Query: 371 TREVSNIKGMYEHE 412
+N K + EH+
Sbjct: 201 NS--TNSKTLEEHQ 212
>SB_45286| Best HMM Match : GRIP (HMM E-Value=3.6e-08)
Length = 800
Score = 29.9 bits (64), Expect = 1.2
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +2
Query: 284 LAAYIDKVRQLESENSGLRREIQTTQEVV---TREVSNIKGMYEHELQDARKLLDDTSRE 454
L Y + + ++ENS LRRE ++ + T + + E ++ RKL D SRE
Sbjct: 477 LIHYAQQQARRDAENSALRREKNDLEDDLRDCTLREAKTRDQCETLKEEIRKLERDRSRE 536
Query: 455 KAKLE 469
A LE
Sbjct: 537 TANLE 541
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/74 (24%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Frame = +2
Query: 257 DALQN-LNDR---LAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHELQDA 424
DAL+ + DR + +K+ LE +NS ++ E + T+E + + S+++
Sbjct: 2373 DALKKEIRDRDKSIGELTEKIETLEKDNSSVQSEYKETKEKLKKRSSSLQEKLGVSKNFM 2432
Query: 425 RKLLDDTSREKAKL 466
+K+LD+ K ++
Sbjct: 2433 QKILDENEELKGRI 2446
>SB_25234| Best HMM Match : SMC_hinge (HMM E-Value=3.7e-28)
Length = 552
Score = 29.5 bits (63), Expect = 1.6
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Frame = +2
Query: 296 IDKVRQLESENSG-LRREIQTTQEVVTREVSNIKGMYEHE--LQDARKLLDDTSRE---- 454
++ VR ES +G L++E+ E + + +I+ + E E L +K L++ +E
Sbjct: 7 LEGVRHEESTRAGDLQKEVTQASENIEKYSQSIRDLGEKENVLTSEKKQLEEECQENIKQ 66
Query: 455 KAKLEIDLKRL 487
+ KLE+D+K L
Sbjct: 67 RTKLELDIKDL 77
>SB_12264| Best HMM Match : Filament (HMM E-Value=0.0075)
Length = 762
Score = 29.5 bits (63), Expect = 1.6
Identities = 20/75 (26%), Positives = 33/75 (44%)
Frame = +2
Query: 263 LQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHELQDARKLLDD 442
L+ L + + + E S LR+ + + ++ + N K EHEL AR +DD
Sbjct: 508 LEELREEHVKLLSSSEYADLERSQLRKRLSDLEGLMAT-LKNEKESLEHELGSARGRIDD 566
Query: 443 TSREKAKLEIDLKRL 487
+K L L+ L
Sbjct: 567 LETKKNLLTEQLEIL 581
>SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11)
Length = 1491
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 293 YIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHELQDARKLLDDTSRE 454
Y DK+ LE+EN L +I + +E + +K +E E + LD E
Sbjct: 1239 YEDKIASLEAENEALMEDIFVLKTRYRQEKAMMKAEFETERNALEERLDQEREE 1292
>SB_2495| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.2e-11)
Length = 2024
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +2
Query: 308 RQLESENSGLRREIQTTQEVVTR---EVSNIKGMYEHELQDARKLLDDTSREKA 460
+QLES + G RRE+Q + ++ + E S ++ +E + Q+ L D ++ A
Sbjct: 859 QQLESYSDGYRRELQRKEAMIQQLYAEKSKLQSEFERQKQEVYVLQHDFQKQVA 912
>SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1218
Score = 29.1 bits (62), Expect = 2.1
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 308 RQLESENSGLRREIQTTQEVVTREVSNIKG-MYEHELQDARKLLDDTSREKAKLE 469
+ L+ E L E Q + K + EH +++ KLL + +REKA+LE
Sbjct: 205 KSLKEEKYKLEEEFQANVASNEKNFQKWKSEIEEHFMEEKAKLLQNAAREKAELE 259
>SB_23774| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 805
Score = 29.1 bits (62), Expect = 2.1
Identities = 19/71 (26%), Positives = 31/71 (43%)
Frame = +2
Query: 257 DALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHELQDARKLL 436
+ L+ L DR+A ++ LE + +R+E T E T E +K + +L
Sbjct: 51 ERLEELEDRIAKLEEERDNLEVQLETVRKENDTEMEKQTNENDTLKETITGHEETIEQLK 110
Query: 437 DDTSREKAKLE 469
+ KA LE
Sbjct: 111 SEIEEIKADLE 121
>SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3511
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/63 (23%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Frame = +2
Query: 230 YQAK-PFAREDALQNLNDRLAAYIDKVRQLESENSGLRR--EIQTTQEVVTREVSNIKGM 400
+Q+K PF+ ++ +++ Y ++V L+S+ + LRR I ++ +++++ N++
Sbjct: 513 FQSKGPFSSSIGVKEALEQVTQYHEQVVNLKSQETSLRRGLNIFKIEQALSKDLQNLEKD 572
Query: 401 YEH 409
EH
Sbjct: 573 LEH 575
>SB_16761| Best HMM Match : PDZ (HMM E-Value=1.6e-08)
Length = 889
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +2
Query: 299 DKVRQLESENSGLRREIQ---TTQEVVTREVSNIKGMYEHELQDARKLLDDTSREKAK 463
DK +E EN +R++++ T +V RE+ N+K M Q++ KLL++ +++
Sbjct: 3 DKYGAIE-ENRKMRQDLKDATTKLQVAEREIENLKTMLGECSQESVKLLEEVEEVRSR 59
>SB_16649| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 483
Score = 28.7 bits (61), Expect = 2.7
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +2
Query: 296 IDKVRQLESENSGLRREIQTTQEV 367
+DK+R LE EN+ LR+E+ +++
Sbjct: 171 VDKIRHLEKENTRLRQEVDNLRKM 194
>SB_9721| Best HMM Match : Filament (HMM E-Value=0.2)
Length = 216
Score = 28.7 bits (61), Expect = 2.7
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = +2
Query: 266 QNLNDRLAAYIDKV-RQLESENSGLRREIQTTQEVVTR-EVSNIKGMYEHE-LQDARKLL 436
++L D++ Y+D RQL E L+ + ++ + E K E+E L+ A +
Sbjct: 117 KSLEDKII-YLDATKRQLPKEKDELKSRVDHLEDSIGDFETEKAKLFTENEELRLANLEI 175
Query: 437 DDTSREKAKLEIDLK 481
D RE+ KLE ++K
Sbjct: 176 QDVYRERGKLEAEIK 190
>SB_48940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 298
Score = 28.7 bits (61), Expect = 2.7
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = +2
Query: 257 DALQNLNDRLAAYIDKVRQLES---ENSGLRREIQTTQEVVTREVSNIKGMYEHELQDAR 427
D + +L R + D V LE + L REI+ VV++E+ + K E+QD+
Sbjct: 68 DEIDDLKTRPSGATDYVALLEEWKKADVNLLREIRDVGNVVSKEIKDSKKSISKEIQDSV 127
Query: 428 K 430
K
Sbjct: 128 K 128
>SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07)
Length = 1447
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/71 (25%), Positives = 34/71 (47%)
Frame = +2
Query: 269 NLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHELQDARKLLDDTS 448
NL LAAYI + + L ++ L ++QT + R + ++ E ++ D L+ +S
Sbjct: 775 NLARELAAYITREKNLARQSDDLSLQVQTL-DAEKRSLQSLVSSQEKQVADLSVKLEKSS 833
Query: 449 REKAKLEIDLK 481
+E L+
Sbjct: 834 ERCRLMEQQLQ 844
>SB_35536| Best HMM Match : zf-C2H2 (HMM E-Value=0.0069)
Length = 657
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/88 (20%), Positives = 38/88 (43%)
Frame = +2
Query: 203 RSSKQST*SYQAKPFAREDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREV 382
+S+K +YQ + E+ L L ++ QLE E ++ E++ T+E++ E+
Sbjct: 208 KSTKDELFTYQKRRNEYEEKLNALLEKEKIVEMTTLQLEDEKEKIKNELEETKELMQAEL 267
Query: 383 SNIKGMYEHELQDARKLLDDTSREKAKL 466
+ Y + + L + + L
Sbjct: 268 ESQAETYTEQTRKMHSELQEGRAREGSL 295
>SB_33073| Best HMM Match : Protamine_P1 (HMM E-Value=1.5)
Length = 537
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 258 MHYKISTTGWLPISIKYASWRVRIRDYVVKYKPHR-RWSPARFPTLKECTSMNSK 419
+ Y+ + PI+++Y VR R V+Y+P R+ P L E T+ SK
Sbjct: 481 VRYRPIAVRYRPIAVRYRPIAVRYRPIAVRYRPIAVRYRPIAENGLVERTTRQSK 535
Score = 28.3 bits (60), Expect = 3.6
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 258 MHYKISTTGWLPISIKYASWRVRIRDYVVKYKP 356
+ Y+ S + PI+++Y VR R V+Y+P
Sbjct: 460 VRYRPSAVRYRPIAVRYRPIAVRYRPIAVRYRP 492
>SB_30233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 807
Score = 28.7 bits (61), Expect = 2.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -3
Query: 88 LVGYIFVTITNFDTQ*CIFHTKGE 17
L+GY+F+ ++N + C H KGE
Sbjct: 567 LIGYVFMMLSNTNIHQCFQHCKGE 590
>SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19)
Length = 3107
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2
Query: 248 AREDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSN 388
A E L D + D+ LE +N GL RE++T + V+ ++N
Sbjct: 432 ALERDLSTRTDMVRKLRDEKSALEKKNEGLIRELETNKRFVSTALNN 478
>SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016)
Length = 1284
Score = 28.7 bits (61), Expect = 2.7
Identities = 21/77 (27%), Positives = 38/77 (49%)
Frame = +2
Query: 254 EDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHELQDARKL 433
E+++ +L +++ +V ++ + + QT + +S I + E +LQ A K
Sbjct: 1126 EESVSSLMRQMSQLQLEVEVRDTRLAEIEHLFQTEKADKQNLISEIMNLQE-QLQKAEKD 1184
Query: 434 LDDTSREKAKLEIDLKR 484
+ E AKLE DLKR
Sbjct: 1185 EETRKEEVAKLECDLKR 1201
>SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1524
Score = 28.3 bits (60), Expect = 3.6
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = +2
Query: 257 DALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGM---YEHELQDAR 427
D L N+ L KV +LE E L E++ ++ + ++ ++ +
Sbjct: 716 DELMKQNESLRK---KVSKLEDEVRFLNDELREADSSSIKDTEKLNAEIREFKKKIVELE 772
Query: 428 KLLDDTSREKAKLEIDLKRL 487
KL+DD E KLE +LK +
Sbjct: 773 KLVDDQEEEIKKLEDELKNV 792
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 28.3 bits (60), Expect = 3.6
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +2
Query: 299 DKVRQLESENSGLRREIQTTQE---VVTREVSNIKGMYEHELQDARKLLDDTSREKAKLE 469
DKV QLE E + LR + + ++ + +E+ +K +L+ A + DD ++E +LE
Sbjct: 820 DKVAQLEKELANLRTKYKVIEDRDGMKQKEIDQLKA----DLEAAMEKADDLAKEVQRLE 875
>SB_37872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 357
Score = 28.3 bits (60), Expect = 3.6
Identities = 18/75 (24%), Positives = 37/75 (49%)
Frame = +2
Query: 263 LQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHELQDARKLLDD 442
L ++ LA +++ + E++ + Q +++ + NI+ + + R LD+
Sbjct: 164 LDSVRAELATMSERLESEQKEHAQAEAKTQKSEQFLR----NIEAKSKQVIIALRGQLDE 219
Query: 443 TSREKAKLEIDLKRL 487
S EK KLE ++ RL
Sbjct: 220 ASEEKVKLEEEVNRL 234
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 28.3 bits (60), Expect = 3.6
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +2
Query: 299 DKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHELQDARKLLDDTSRE 454
DKV LE E LR I+ + + + V + YE+EL D+RK D E
Sbjct: 3405 DKV-SLEKEQWELREAIEELRATL-KGVEEERDRYENELDDSRKQYPDAKDE 3454
>SB_10610| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 594
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 282 GWLPISIKYASWRVRIRDYVVKYKPHRRWSPARFPTLKECT 404
GW+ ++ RVR+ D +V+ PH A PT+ + T
Sbjct: 463 GWITNAVYTGISRVRLADQIVRVIPHDDTPGALVPTVLQAT 503
>SB_1658| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.16)
Length = 458
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +2
Query: 299 DKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHELQDARKLLDDTSRE 454
D+V LE EN LR+E+ + E + ++ K E Q+ + LD ++
Sbjct: 19 DRVSNLELENKLLRKEVSSLNEEMVSQLQRAKDA-EKRAQETDRHLDHAQQQ 69
>SB_49818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 344 EIQTTQEVVTREVSNIKGMYEHELQDARKLLDDTSREKAKLE 469
EI T E + R +++K + EH ++D LDD S EK E
Sbjct: 35 EICTALEKIGR--NDVKQVIEHHIKDRDCYLDDDSIEKVSFE 74
>SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10)
Length = 2155
Score = 27.9 bits (59), Expect = 4.7
Identities = 17/84 (20%), Positives = 37/84 (44%)
Frame = +2
Query: 233 QAKPFAREDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHE 412
+AK +E +Q++ D I++++ E + +E++ ++ K YE
Sbjct: 95 EAKLQEKELDVQSVRDAKDRNIEELKAKLQEREAMLESANEGEELLKSQLEAAKQFYESA 154
Query: 413 LQDARKLLDDTSREKAKLEIDLKR 484
+D LDD + +L+ L +
Sbjct: 155 SRDLNVTLDDLRSKNEQLQRQLSQ 178
>SB_40853| Best HMM Match : BTB (HMM E-Value=1.4e-17)
Length = 259
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 302 KVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHE 412
KV LE + + +R+EI+ T E RE+S + +H+
Sbjct: 175 KVATLEQKPNSIRKEIKETCEWAIREISRVVFHKKHQ 211
>SB_20162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 842
Score = 27.9 bits (59), Expect = 4.7
Identities = 17/65 (26%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Frame = +2
Query: 293 YIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHELQDARKLLDDTSREK---AK 463
Y ++++ +E EN+GL+ E + + + +TR I+ + + +K ++T R +
Sbjct: 54 YEERLQSMEMENAGLKDEKRHSSQQITRSEQAIQQLNKDMSSLKQKHRNETLRSEETIQN 113
Query: 464 LEIDL 478
LEI+L
Sbjct: 114 LEIEL 118
>SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1755
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = +2
Query: 332 GLRREIQTTQEVVTREVSNIKGMYEHELQDARKLLDDTSREKAKLE 469
GLRRE+ + E+V+ + IK + E E+ D + +++ + ++E
Sbjct: 1203 GLRRELGRSMEMVSAKAERIKKL-EAEVADLQSMVEQDRQRAERME 1247
>SB_41916| Best HMM Match : DUF164 (HMM E-Value=0.8)
Length = 391
Score = 27.5 bits (58), Expect = 6.3
Identities = 19/80 (23%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Frame = +2
Query: 257 DALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYE------HELQ 418
D Q L +++ A +DK + + L+ ++ T Q + + ++ +GM E ++Q
Sbjct: 135 DEKQRLEEQMRAVMDKYKYKRRQIRELQEDLGTMQVTLDKLTADEQGMVEVIDEKQQKMQ 194
Query: 419 DARKLLDDT--SREKAKLEI 472
+ ++ LDD RE+A ++
Sbjct: 195 NLQRELDDQKGKRERAGKQV 214
>SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05)
Length = 1312
Score = 27.5 bits (58), Expect = 6.3
Identities = 17/75 (22%), Positives = 37/75 (49%)
Frame = +2
Query: 254 EDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHELQDARKL 433
+D L L DK+R+L+ E S +RE T + + +E ++++ + + D K
Sbjct: 921 QDFLGKLEKAKVPLEDKIRELKEELSKAKREQNTAKSALEQEKADLQQEVD-RVNDNMKA 979
Query: 434 LDDTSREKAKLEIDL 478
++++ + + DL
Sbjct: 980 KLQRAKDEIERQADL 994
>SB_21939| Best HMM Match : F-box (HMM E-Value=0.001)
Length = 909
Score = 27.5 bits (58), Expect = 6.3
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -3
Query: 178 TGVLDCSGLCSDDTTLAFDEDVTVF 104
TG + +G+C DD++ DED +F
Sbjct: 830 TGSIHVTGVCQDDSSSTSDEDSNMF 854
>SB_39125| Best HMM Match : DUF164 (HMM E-Value=0.082)
Length = 363
Score = 27.5 bits (58), Expect = 6.3
Identities = 17/75 (22%), Positives = 37/75 (49%)
Frame = +2
Query: 254 EDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHELQDARKL 433
+D L L DK+R+L+ E S +RE T + + +E ++++ + + D K
Sbjct: 201 QDFLGKLEKAKVPLEDKIRELKEELSKAKREQNTAKSALEQEKADLQQEVD-RVNDNMKA 259
Query: 434 LDDTSREKAKLEIDL 478
++++ + + DL
Sbjct: 260 KLQRAKDEIERQADL 274
>SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2463
Score = 27.5 bits (58), Expect = 6.3
Identities = 23/89 (25%), Positives = 46/89 (51%)
Frame = +2
Query: 212 KQST*SYQAKPFAREDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNI 391
KQS+ ++ AR +N N ++ + VR + G RR Q + ++ +E
Sbjct: 1938 KQSSLAFLEHRTARS---RNENIKILRILSGVRIIGPAVRGSRRR-QPCEPMLEQETME- 1992
Query: 392 KGMYEHELQDARKLLDDTSREKAKLEIDL 478
+ E +LQ+ ++ LD+ ++K +LE++L
Sbjct: 1993 RMRLEVQLQEIQESLDEIKKKKDQLEVEL 2021
>SB_12753| Best HMM Match : M (HMM E-Value=0.0006)
Length = 304
Score = 27.5 bits (58), Expect = 6.3
Identities = 11/54 (20%), Positives = 27/54 (50%)
Frame = +2
Query: 254 EDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHEL 415
+D + +L ++A + + ++LE+EN + E + + ++ + EH L
Sbjct: 108 QDQITSLKSQIACIVSEKKKLETENQNIYLEREMLSKGSKEKIEELSTQLEHVL 161
>SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098)
Length = 1177
Score = 27.1 bits (57), Expect = 8.3
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +2
Query: 317 ESENSGLRREIQTTQEVVTREVSNIKGMYEHE--LQDARKLLDDTSREKAKLE 469
E+EN LR E++ V R +K +HE L+D L ++K +LE
Sbjct: 165 ETENVSLRNEVRYLHGEVKRLEEQLKAETQHESTLRDLSSQLATAVQQKEELE 217
>SB_27760| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 27.1 bits (57), Expect = 8.3
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 273 STTGWLPISIKYASWRVRIRDYVVKYKPHRRWSPARFPTLKECT 404
S GW+ ++ RVR+ D +V+ PH A PT + T
Sbjct: 104 SLEGWITNAVYTGISRVRLADQIVRVIPHDDTPGALVPTGLQAT 147
>SB_17486| Best HMM Match : CheR (HMM E-Value=3.2)
Length = 1177
Score = 27.1 bits (57), Expect = 8.3
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 273 STTGWLPISIKYASWRVRIRDYVVKYKPHRRWSPARFPTLKECT 404
S GW+ ++ RVR+ D +V+ PH A PT + T
Sbjct: 1075 SLEGWITNAVYTGISRVRLADQIVRVIPHDDTPGALVPTGLQAT 1118
>SB_4107| Best HMM Match : M (HMM E-Value=8e-22)
Length = 2039
Score = 27.1 bits (57), Expect = 8.3
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 317 ESENSGLRREIQTTQEVVTREVSNIKGMYEHELQDARKLLDDTSREKAKLEID 475
E EN L R+IQ Q+ + E E ARKL++ TSR + ++E++
Sbjct: 1843 EHENQELHRQIQILQQQLA----------ETEQSHARKLVEVTSRHRQEIEME 1885
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,330,491
Number of Sequences: 59808
Number of extensions: 287529
Number of successful extensions: 1238
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 1043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1229
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1038380485
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -