BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0664 (656 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At3g06860.1 68416.m00814 fatty acid multifunctional protein (MFP... 66 3e-11 At4g29010.1 68417.m04147 abnormal inflorescence meristem 1 / fat... 64 8e-11 At4g16800.1 68417.m02537 enoyl-CoA hydratase, putative similar t... 50 1e-06 At5g43280.1 68418.m05290 enoyl-CoA hydratase/isomerase family pr... 48 7e-06 At4g16210.1 68417.m02460 enoyl-CoA hydratase/isomerase family pr... 34 0.096 At3g24360.1 68416.m03058 enoyl-CoA hydratase/isomerase family pr... 32 0.39 At1g75080.2 68414.m08720 brassinosteroid signalling positive reg... 31 0.51 At1g75080.1 68414.m08719 brassinosteroid signalling positive reg... 31 0.51 At3g18370.1 68416.m02336 C2 domain-containing protein contains P... 29 2.1 At5g39760.1 68418.m04816 zinc finger homeobox protein-related / ... 29 2.7 At2g05250.1 68415.m00553 DNAJ heat shock N-terminal domain-conta... 29 2.7 At2g05230.1 68415.m00551 DNAJ heat shock N-terminal domain-conta... 29 2.7 At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 29 3.6 At2g38230.1 68415.m04695 stress-responsive protein, putative sim... 29 3.6 At1g10050.1 68414.m01133 glycosyl hydrolase family 10 protein / ... 29 3.6 At4g13360.1 68417.m02089 enoyl-CoA hydratase/isomerase family pr... 28 4.8 At2g27810.2 68415.m03372 xanthine/uracil permease family protein... 28 4.8 At2g27810.1 68415.m03371 xanthine/uracil permease family protein... 28 4.8 At2g02150.1 68415.m00151 pentatricopeptide (PPR) repeat-containi... 28 4.8 At4g08113.1 68417.m01331 myosin heavy chain-related similar to M... 28 6.3 At2g30650.1 68415.m03738 3-hydroxyisobutyryl-coenzyme A hydrolas... 28 6.3 At1g25520.1 68414.m03169 expressed protein contains Pfam profile... 28 6.3 At4g32640.1 68417.m04646 sec23/sec24 transport protein-related 27 8.3 At2g45590.1 68415.m05669 protein kinase family protein contains ... 27 8.3 >At3g06860.1 68416.m00814 fatty acid multifunctional protein (MFP2) identical to fatty acid multifunctional protein (AtMFP2) GB:AF123254 [gi:4337027] (Arabidopsis thaliana) (fatty acid beta-oxidation); contains Pfam profiles PF02737 (3-hydroxyacyl-CoA dehydrogenase, NAD binding domain), PF00378 (enoyl-CoA hydratase/isomerase family protein), PF00725 (3-hydroxyacyl-CoA dehydrogenase) Length = 725 Score = 65.7 bits (153), Expect = 3e-11 Identities = 28/55 (50%), Positives = 39/55 (70%) Frame = +1 Query: 286 GLPEVMLGLLPGGGGTQRLPALTSIPTTLDLALTGKTVKADKAKKLGIVDLLVSP 450 GLPE+ LG++PG GGTQRLP L + L++ LT K VKA++ LG++D +V P Sbjct: 136 GLPELQLGVIPGFGGTQRLPRLVGLTKALEMILTSKPVKAEEGHSLGLIDAVVPP 190 Score = 45.6 bits (103), Expect = 3e-05 Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 4/73 (5%) Frame = +2 Query: 41 AVIISGKPGCFIAGADISMIENCKTKEEVVSLSKRGHE----IFRRIEQSRKPYIAAIQG 208 A++I+G G F G DIS + V K G+ I +E +RKP +AAI G Sbjct: 54 AIVITGAKGRFSGGFDISGFGEMQKGN--VKEPKAGYISIDIITDLLEAARKPSVAAIDG 111 Query: 209 SCLGGGLETALAC 247 LGGGLE A+AC Sbjct: 112 LALGGGLELAMAC 124 >At4g29010.1 68417.m04147 abnormal inflorescence meristem 1 / fatty acid multifunctional protein (AIM1) identical to gi:4337025; contains Pfam profiles PF02737 (3-hydroxyacyl-CoA dehydrogenase, NAD binding domain), PF00378 (enoyl-CoA hydratase/isomerase family protein), PF00725 (3-hydroxyacyl-CoA dehydrogenase) Length = 721 Score = 64.1 bits (149), Expect = 8e-11 Identities = 27/59 (45%), Positives = 39/59 (66%) Frame = +1 Query: 274 KTGFGLPEVMLGLLPGGGGTQRLPALTSIPTTLDLALTGKTVKADKAKKLGIVDLLVSP 450 K GLPE+ LG++PG GGTQRLP L + D+ L K++ +++ KLG++D LV P Sbjct: 129 KAQLGLPELTLGVIPGFGGTQRLPRLVGLAKATDMILLSKSISSEEGHKLGLIDALVPP 187 Score = 50.8 bits (116), Expect = 8e-07 Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 1/70 (1%) Frame = +2 Query: 41 AVIISGKPGCFIAGADISMIENCKTKEEVVSLSKRGHEIFRRI-EQSRKPYIAAIQGSCL 217 A+++ G G F G DI++ + ++ + + E+ + E SRKP +AA++G L Sbjct: 52 AIVLIGNNGRFSGGFDINVFQQVHKTGDLSLMPEVSVELVCNLMEDSRKPVVAAVEGLAL 111 Query: 218 GGGLETALAC 247 GGGLE A+AC Sbjct: 112 GGGLELAMAC 121 >At4g16800.1 68417.m02537 enoyl-CoA hydratase, putative similar to AU-binding protein/Enoyl-CoA hydratase [Homo sapiens] GI:780241, [Mus musculus]GI:6840920; contains Pfam profile PF00378 enoyl-CoA hydratase/isomerase family protein Length = 229 Score = 50.4 bits (115), Expect = 1e-06 Identities = 23/55 (41%), Positives = 34/55 (61%) Frame = +1 Query: 283 FGLPEVMLGLLPGGGGTQRLPALTSIPTTLDLALTGKTVKADKAKKLGIVDLLVS 447 FGLPE L ++PG GGTQRL L + +L TG+ + A +A G+V++ V+ Sbjct: 99 FGLPETGLAIIPGAGGTQRLSRLVGRSVSKELIFTGRKIDAIEAANKGLVNICVT 153 Score = 48.8 bits (111), Expect = 3e-06 Identities = 31/78 (39%), Positives = 40/78 (51%) Frame = +2 Query: 14 IETNSGIEAAVIISGKPGCFIAGADISMIENCKTKEEVVSLSKRGHEIFRRIEQSRKPYI 193 I ++ +I S PG F AGAD+ + EV + +F IE P I Sbjct: 12 IHQDNSARVVMIRSLVPGVFCAGADLKE-RRTMSPSEVHTYVNSLRYMFSFIEALSIPTI 70 Query: 194 AAIQGSCLGGGLETALAC 247 AAI+G+ LGGGLE ALAC Sbjct: 71 AAIEGAALGGGLEMALAC 88 >At5g43280.1 68418.m05290 enoyl-CoA hydratase/isomerase family protein similar to Delta 3,5-delta2,4-dienoyl-CoA isomerase, mitochondrial (ECH1) from Rattus norvegicus [SP|Q62651], from Homo sapiens [SP|Q13011]; contains Pfam profile PF00378 enoyl-CoA hydratase/isomerase family protein Length = 278 Score = 47.6 bits (108), Expect = 7e-06 Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 11/92 (11%) Frame = +2 Query: 5 VNEIETNSGIEAAVIISGKPGCFIAGADISMIENCKTKEEVVSLSKRGHEIFRR------ 166 ++ ++ N + + +I+SG F +G D++ + + T+ + R E RR Sbjct: 46 LSSLDQNPDV-SVIILSGAGKHFCSGIDLNSLSSISTQSSSGNDRGRSSEQLRRKIKSMQ 104 Query: 167 -----IEQSRKPYIAAIQGSCLGGGLETALAC 247 IEQ RKP IAAI G+C+GGG++ AC Sbjct: 105 AAITAIEQCRKPVIAAIHGACIGGGVDLITAC 136 Score = 38.3 bits (85), Expect = 0.004 Identities = 18/50 (36%), Positives = 28/50 (56%) Frame = +1 Query: 283 FGLPEVMLGLLPGGGGTQRLPALTSIPTTLDLALTGKTVKADKAKKLGIV 432 F + EV L ++ G QRLP++ ++LALT + +AK LG+V Sbjct: 147 FSIKEVDLAIVADLGTLQRLPSIVGYANAMELALTARRFSGSEAKDLGLV 196 >At4g16210.1 68417.m02460 enoyl-CoA hydratase/isomerase family protein similar to 3-hydroxybutyryl-CoA dehydratase (Crotonase) from Clostridium acetobutylicum [SP|P52046], FadB1x (enoyl-CoA hydratase) from Pseudomonas putida [GI:13310130]; contains Pfam profile PF00378 enoyl-CoA hydratase/isomerase family protein Length = 265 Score = 33.9 bits (74), Expect = 0.096 Identities = 23/79 (29%), Positives = 41/79 (51%) Frame = +2 Query: 11 EIETNSGIEAAVIISGKPGCFIAGADISMIENCKTKEEVVSLSKRGHEIFRRIEQSRKPY 190 +++++ ++ VI +G F +G D++ E+ K +V + ++E+ RKP Sbjct: 47 DMDSDESVQV-VIFTGSGRSFCSGVDLTAAESV-FKGDVKDPET---DPVVQMERLRKPI 101 Query: 191 IAAIQGSCLGGGLETALAC 247 I AI G + G E ALAC Sbjct: 102 IGAINGFAITAGFELALAC 120 >At3g24360.1 68416.m03058 enoyl-CoA hydratase/isomerase family protein similar to CHY1 [gi:8572760]; contains Pfam profile PF00388 enoyl-CoA hydratase/isomerase family protein Length = 418 Score = 31.9 bits (69), Expect = 0.39 Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 4/80 (5%) Frame = +2 Query: 2 IVNEIETNSGIEAAVIISGKPGCFIAGADISMIENCKTKEEVVSLSKR----GHEIFRRI 169 +++E E + G++ V+ F AG DI + ++ SL ++ + + +I Sbjct: 81 LLDEWEYDPGVKCVVVEGSTSRAFCAGMDIKGVVAEILMDKNTSLVQKVFTAEYSLICKI 140 Query: 170 EQSRKPYIAAIQGSCLGGGL 229 RKPYI+ + G +G GL Sbjct: 141 AGYRKPYISLMDGITMGFGL 160 >At1g75080.2 68414.m08720 brassinosteroid signalling positive regulator (BZR1) identical to to BZR1 protein [Arabidopsis thaliana] gi|20270971|gb|AAM18490 Length = 336 Score = 31.5 bits (68), Expect = 0.51 Identities = 25/84 (29%), Positives = 33/84 (39%) Frame = -1 Query: 479 SSG*PKPGPRGETNRSTIPNFFALSAFTVLPVRARSKVVGMEVRAGNLCVPPPPGKSPNM 300 SS P P RGE N + FF +P S +R N C PP SP Sbjct: 133 SSSFPSPS-RGEPNNNMSSTFFPFLRNGGIPSSLPS------LRISNSCPVTPPVSSPTS 185 Query: 299 TSGSPNPVLESFTAMDIYMQEQSL 228 + P P ES + + +QS+ Sbjct: 186 KNPKPLPNWESIAKQSMAIAKQSM 209 >At1g75080.1 68414.m08719 brassinosteroid signalling positive regulator (BZR1) identical to to BZR1 protein [Arabidopsis thaliana] gi|20270971|gb|AAM18490 Length = 336 Score = 31.5 bits (68), Expect = 0.51 Identities = 25/84 (29%), Positives = 33/84 (39%) Frame = -1 Query: 479 SSG*PKPGPRGETNRSTIPNFFALSAFTVLPVRARSKVVGMEVRAGNLCVPPPPGKSPNM 300 SS P P RGE N + FF +P S +R N C PP SP Sbjct: 133 SSSFPSPS-RGEPNNNMSSTFFPFLRNGGIPSSLPS------LRISNSCPVTPPVSSPTS 185 Query: 299 TSGSPNPVLESFTAMDIYMQEQSL 228 + P P ES + + +QS+ Sbjct: 186 KNPKPLPNWESIAKQSMAIAKQSM 209 >At3g18370.1 68416.m02336 C2 domain-containing protein contains Pfam profile: PF00168 C2 domain Length = 815 Score = 29.5 bits (63), Expect = 2.1 Identities = 14/24 (58%), Positives = 17/24 (70%) Frame = +1 Query: 292 PEVMLGLLPGGGGTQRLPALTSIP 363 PEV +G+ GGGG Q LPA T +P Sbjct: 229 PEVRIGVAFGGGGGQSLPA-TELP 251 >At5g39760.1 68418.m04816 zinc finger homeobox protein-related / ZF-HD homeobox protein-related predicted proteins, Arabidopsis thaliana Length = 334 Score = 29.1 bits (62), Expect = 2.7 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = -1 Query: 329 PPPPGKSPNMTSGSPNPVLESFTAMDI 249 PPPP +SPN S SP P+ S+ + + Sbjct: 140 PPPPPRSPN--SASPPPISSSYMLLSL 164 >At2g05250.1 68415.m00553 DNAJ heat shock N-terminal domain-containing protein contains Pfam profile PF00226 DnaJ domain Length = 706 Score = 29.1 bits (62), Expect = 2.7 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 5/40 (12%) Frame = +1 Query: 181 ETVYCRNTRQLSRRWIRDCSCM*ISIAV-----KDSKTGF 285 +TVY R+TR+ S++WI C + S V KD+ +GF Sbjct: 643 KTVYHRSTREDSKKWIPRCEMLRFSHQVPSWFLKDATSGF 682 >At2g05230.1 68415.m00551 DNAJ heat shock N-terminal domain-containing protein contains Pfam profile PF00226 DnaJ domain Length = 706 Score = 29.1 bits (62), Expect = 2.7 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 5/40 (12%) Frame = +1 Query: 181 ETVYCRNTRQLSRRWIRDCSCM*ISIAV-----KDSKTGF 285 +TVY R+TR+ S++WI C + S V KD+ +GF Sbjct: 643 KTVYHRSTREDSKKWIPRCEMLRFSHQVPSWFLKDATSGF 682 >At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat family protein contains 8 WD-40 repeats; similar to JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus] Length = 1026 Score = 28.7 bits (61), Expect = 3.6 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Frame = +3 Query: 420 IGNCRSVSFPSWTRFGSA*GKYSQIPRNCSIQIAKDI-AAGKIIVDRSKKGLVQKIT 587 +GN + SFPS F S + + C +Q + A+ ++I KG+VQ T Sbjct: 157 LGNIQIQSFPSRAYFSSNKSFFEWLAMKCQVQKCFALSASSRLIACACSKGMVQLFT 213 >At2g38230.1 68415.m04695 stress-responsive protein, putative similar to ethylene-inducible protein HEVER [Hevea brasiliensis] SWISS-PROT:Q39963; contains Pfam domain, PF01680: SOR/SNZ family Length = 309 Score = 28.7 bits (61), Expect = 3.6 Identities = 14/46 (30%), Positives = 23/46 (50%) Frame = -3 Query: 279 CFGVFHSNGYLHARAVSNPPPRQLPCIAAIYGFRDCSILLNISCPL 142 C GVF +G + +P R + A+ +RD ++L +SC L Sbjct: 246 CDGVFVGSGVFKS---GDPVKRAKAIVQAVTNYRDAAVLAEVSCGL 288 >At1g10050.1 68414.m01133 glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein similar to GB:AAD27896 to endoxylanases gi|1255238 (Thermoanaerobacterium thermosulfurigenes), gi|1813595 (Hordeum vulgare) and others ; contains Pfam profiles PF00331: Glycosyl hydrolase family 10, PF02018: Carbohydrate binding domain Length = 1063 Score = 28.7 bits (61), Expect = 3.6 Identities = 16/46 (34%), Positives = 25/46 (54%) Frame = +2 Query: 95 MIENCKTKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCLGGGLE 232 MIE C E ++ RGH IF +E + +P++ + GS L +E Sbjct: 777 MIEFC----ERYNIKTRGHCIFWEVESAIQPWVQQLTGSKLEAAVE 818 >At4g13360.1 68417.m02089 enoyl-CoA hydratase/isomerase family protein similar to CoA-thioester hydrolase CHY1 (beta-hydroxyisobutyryl-CoA hydrolase) [Arabidopsis thaliana] GI:8572760; contains Pfam profile PF00378: enoyl-CoA hydratase/isomerase family protein Length = 381 Score = 28.3 bits (60), Expect = 4.8 Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 4/79 (5%) Frame = +2 Query: 5 VNEIETNSGIEAAVIISGKPGCFIAGADI----SMIENCKTKEEVVSLSKRGHEIFRRIE 172 ++E E++ ++ ++ F AG DI + I+ K V + + + I Sbjct: 45 LDEWESDPRVKCVIVEGSTSRAFCAGMDIKGVAAEIQKDKNTPLVQKVFTAEYTLICAIA 104 Query: 173 QSRKPYIAAIQGSCLGGGL 229 +KPYI+ + G +G GL Sbjct: 105 AYKKPYISLMDGITMGFGL 123 >At2g27810.2 68415.m03372 xanthine/uracil permease family protein contains Pfam profile: PF00860 permease family Length = 660 Score = 28.3 bits (60), Expect = 4.8 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = -1 Query: 392 LPVRARSKVVGMEVRAGNLCVPPPPGKSPNMTSG 291 LPVRA+ + ++ AG + PPP S +T+G Sbjct: 55 LPVRAKQQETQPDLEAGQTRLRPPPPVSAAVTNG 88 >At2g27810.1 68415.m03371 xanthine/uracil permease family protein contains Pfam profile: PF00860 permease family Length = 709 Score = 28.3 bits (60), Expect = 4.8 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = -1 Query: 392 LPVRARSKVVGMEVRAGNLCVPPPPGKSPNMTSG 291 LPVRA+ + ++ AG + PPP S +T+G Sbjct: 55 LPVRAKQQETQPDLEAGQTRLRPPPPVSAAVTNG 88 >At2g02150.1 68415.m00151 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat Length = 1141 Score = 28.3 bits (60), Expect = 4.8 Identities = 11/38 (28%), Positives = 22/38 (57%) Frame = -2 Query: 601 CITIAVIFCTRPFFDLSTIIFPAAISFAICILQFRGIW 488 CI ++FC R ++D ++++ +S A C + F +W Sbjct: 14 CIVAHILFCARMYYDANSVLKEMVLSKADCDV-FDVLW 50 >At4g08113.1 68417.m01331 myosin heavy chain-related similar to Myosin heavy chain, skeletal muscle, extraocular (MyHC-eo) (SP:Q9UKX3) {Homo sapiens} Length = 764 Score = 27.9 bits (59), Expect = 6.3 Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Frame = +2 Query: 11 EIETNS-GIEAAVIISGKPGCFIAGADISMIENCKTKEEVVSLSKRGHEIFRRIEQSR 181 +++TN+ + IS +PG + GA + +T+ E+++L +RG + ++R Sbjct: 173 QVKTNARSDQGTYYISARPGSLVLGARTKEVTLSETELELLTLLQRGQTNWSTFSRNR 230 >At2g30650.1 68415.m03738 3-hydroxyisobutyryl-coenzyme A hydrolase, putative / CoA-thioester hydrolase, putative strong similarity to gi:8572760; contains Pfam profile PF00388 enoyl-CoA hydratase/isomerase family protein Length = 422 Score = 27.9 bits (59), Expect = 6.3 Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 3/64 (4%) Frame = +2 Query: 44 VIISGKPGCFIAGADISMIENCKTKEEVVSLS---KRGHEIFRRIEQSRKPYIAAIQGSC 214 V++ G+ F AG DI I + +++ + K G+ + + RKP ++ + G Sbjct: 97 VVLKGQGRAFSAGGDIPPIVRDILQGKLIRGAHYFKVGYTLNYVLSTYRKPQVSILNGIV 156 Query: 215 LGGG 226 +GGG Sbjct: 157 MGGG 160 >At1g25520.1 68414.m03169 expressed protein contains Pfam profile PF01169: Uncharacterized protein family UPF0016 Length = 230 Score = 27.9 bits (59), Expect = 6.3 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = +1 Query: 280 GFGLPEVMLGLLPGGGGTQRLPALTSIPTTLDLALTGKTVKADKAKK 420 GFGL + G GGGG++ L A DL GK+ K D +K+ Sbjct: 81 GFGLWSLWDGFKEGGGGSEEL-AEVEAELDADLKANGKSPK-DSSKR 125 >At4g32640.1 68417.m04646 sec23/sec24 transport protein-related Length = 1069 Score = 27.5 bits (58), Expect = 8.3 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = -1 Query: 347 AGNLCVPPPPGKSPNMTSGSPNPV 276 +G++ PPPG P M GSP PV Sbjct: 155 SGSVAAGPPPGSRP-MAFGSPPPV 177 >At2g45590.1 68415.m05669 protein kinase family protein contains protein kinase domain, Pfam:PF00069 Length = 683 Score = 27.5 bits (58), Expect = 8.3 Identities = 15/48 (31%), Positives = 25/48 (52%) Frame = -1 Query: 614 SQTPMHYDCSNLLY*AFFRSINNYFSSSYILCNLYTTVSRYLAVFSSG 471 S++P HY C Y R+ N++ S+++ + +V Y A F SG Sbjct: 69 SKSPQHYQCRRFSYSQLRRATNSFSESTHLGHGGFGSV--YKADFPSG 114 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,902,245 Number of Sequences: 28952 Number of extensions: 327073 Number of successful extensions: 1331 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 1184 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1327 length of database: 12,070,560 effective HSP length: 78 effective length of database: 9,812,304 effective search space used: 1373722560 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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