Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0651
(536 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_14472| Best HMM Match : No HMM Matches (HMM E-Value=.) 123 8e-29
SB_58028| Best HMM Match : zf-C4 (HMM E-Value=0) 86 1e-17
SB_12318| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 2e-12
SB_33135| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_58027| Best HMM Match : zf-C4 (HMM E-Value=0) 58 3e-09
SB_51757| Best HMM Match : Hormone_recep (HMM E-Value=6.4e-37) 57 8e-09
SB_20447| Best HMM Match : zf-C4 (HMM E-Value=2.09999e-41) 52 4e-07
SB_18088| Best HMM Match : zf-C4 (HMM E-Value=7.56701e-44) 50 9e-07
SB_32228| Best HMM Match : zf-C4 (HMM E-Value=6.2e-23) 50 1e-06
SB_56305| Best HMM Match : zf-C4 (HMM E-Value=0) 49 2e-06
SB_10105| Best HMM Match : zf-C4 (HMM E-Value=3.60001e-40) 48 5e-06
SB_30131| Best HMM Match : zf-C4 (HMM E-Value=8.39938e-42) 46 1e-05
SB_5770| Best HMM Match : Hormone_recep (HMM E-Value=3.4e-22) 45 3e-05
SB_4250| Best HMM Match : zf-C4 (HMM E-Value=2.3e-39) 45 5e-05
SB_12110| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_9970| Best HMM Match : zf-C4 (HMM E-Value=9.4e-38) 44 1e-04
SB_58064| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 32 0.26
SB_36879| Best HMM Match : Hormone_recep (HMM E-Value=0) 31 0.45
SB_37830| Best HMM Match : Peptidase_C54 (HMM E-Value=3.3e-11) 25 0.77
SB_11498| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_5110| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_30569| Best HMM Match : 3-alpha (HMM E-Value=6) 29 3.2
SB_27584| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 29 3.2
SB_56020| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_9343| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_40929| Best HMM Match : Attractin (HMM E-Value=5.1) 27 7.3
SB_12193| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_58730| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_34086| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_31180| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
>SB_14472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 603
Score = 123 bits (297), Expect = 8e-29
Identities = 58/84 (69%), Positives = 66/84 (78%), Gaps = 1/84 (1%)
Frame = +1
Query: 253 YPASRYSPCVQ-PTNVMGIDNICELAARLLFSAVEWARNIPFFPELQGTDQXALLRVVWS 429
YP +R+ + P +MGI+NICELAARLLFSAVEWARNIPFFP+L TDQ ALLR+VWS
Sbjct: 358 YPTTRFQQGLNMPCGIMGIENICELAARLLFSAVEWARNIPFFPDLAVTDQVALLRLVWS 417
Query: 430 ELFVLNASQCSMPLHVGPLTXRRG 501
ELFVLNA+QC MPL V PL G
Sbjct: 418 ELFVLNAAQCPMPLQVAPLLATAG 441
Score = 83.8 bits (198), Expect = 8e-17
Identities = 42/83 (50%), Positives = 49/83 (59%)
Frame = +3
Query: 3 SCRGNRSXPIDQHHRNXCQFCRXRKCLKMGMRREAVQRXXXXXXXXXXXXXXXXXXXXNG 182
+CR +R PIDQHHRN CQ+CR +KCLK+GMRREAVQR NG
Sbjct: 278 TCRASRDCPIDQHHRNQCQYCRLKKCLKVGMRREAVQR--GRIPAAQTPTQNAALPGING 335
Query: 183 DPGAGLNNHPYLSSYISLXLRAE 251
D N H YLS +I+L LRAE
Sbjct: 336 D--GSTNGHSYLSGFIALLLRAE 356
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 461 PCPSTWAPLLAAAGLHRPPLXADRL 535
P P APLLA AG+H + DR+
Sbjct: 428 PMPLQVAPLLATAGIHSNHMSPDRM 452
>SB_58028| Best HMM Match : zf-C4 (HMM E-Value=0)
Length = 438
Score = 86.2 bits (204), Expect = 1e-17
Identities = 42/80 (52%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Frame = +1
Query: 247 RSYPASRYSPCVQ-PTNVMGIDNICELAARLLFSAVEWARNIPFFPELQGTDQXALLRVV 423
R+ +RY + P N+ G++N ELAARLL SAVEWA+NIPF+ +L DQ LLR
Sbjct: 187 RADTIARYQQSLTLPCNINGLENTPELAARLLVSAVEWAKNIPFYSDLPLPDQAVLLRSC 246
Query: 424 WSELFVLNASQCSMPLHVGP 483
WSELF LNA+Q P H+ P
Sbjct: 247 WSELFTLNAAQHCSPFHISP 266
Score = 65.7 bits (153), Expect = 2e-11
Identities = 34/83 (40%), Positives = 46/83 (55%)
Frame = +3
Query: 3 SCRGNRSXPIDQHHRNXCQFCRXRKCLKMGMRREAVQRXXXXXXXXXXXXXXXXXXXXNG 182
SCRG R+ P+D +RN CQ+CR +KCLK+GMR+EAVQ+ NG
Sbjct: 114 SCRGVRNCPVDIQNRNQCQYCRLKKCLKVGMRKEAVQKGRIPSTHPDVGPLSVSMVEMNG 173
Query: 183 DPGAGLNNHPYLSSYISLXLRAE 251
+ + SSYI+L LRA+
Sbjct: 174 -------HQSFYSSYITLLLRAD 189
>SB_12318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 420
Score = 69.3 bits (162), Expect = 2e-12
Identities = 34/65 (52%), Positives = 44/65 (67%)
Frame = +1
Query: 307 DNICELAARLLFSAVEWARNIPFFPELQGTDQXALLRVVWSELFVLNASQCSMPLHVGPL 486
D+I E A +LL+ +V WARNIP F +L DQ LL WSELFVL+++Q S+PL +GPL
Sbjct: 227 DSIYESAVQLLYMSVTWARNIPTFLDLPFRDQAILLEEGWSELFVLSSAQFSLPLDMGPL 286
Query: 487 TXRRG 501
G
Sbjct: 287 LSAAG 291
>SB_33135| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 59.7 bits (138), Expect = 1e-09
Identities = 25/56 (44%), Positives = 35/56 (62%)
Frame = +1
Query: 319 ELAARLLFSAVEWARNIPFFPELQGTDQXALLRVVWSELFVLNASQCSMPLHVGPL 486
E+AARLLF WA+ + F EL DQ LLR WS++F++N Q +MP + P+
Sbjct: 173 EMAARLLFMTAHWAKKVKHFSELSHFDQVTLLRENWSKVFIINLVQWAMPFEIAPI 228
Score = 51.2 bits (117), Expect = 5e-07
Identities = 19/30 (63%), Positives = 26/30 (86%)
Frame = +3
Query: 27 PIDQHHRNXCQFCRXRKCLKMGMRREAVQR 116
P+++ +RN CQFCR RKCL +GM+REAVQ+
Sbjct: 67 PVNKRYRNSCQFCRMRKCLAVGMKREAVQQ 96
>SB_58027| Best HMM Match : zf-C4 (HMM E-Value=0)
Length = 396
Score = 58.4 bits (135), Expect = 3e-09
Identities = 27/64 (42%), Positives = 40/64 (62%)
Frame = +1
Query: 286 PTNVMGIDNICELAARLLFSAVEWARNIPFFPELQGTDQXALLRVVWSELFVLNASQCSM 465
P N D ELAA +LF+ V+WAR + F L +DQ LL++ W++LF+L AS+ +
Sbjct: 176 PLNQNRTDVAYELAANVLFAVVDWARKLTTFNNLMDSDQITLLKMAWTDLFLLEASRSPL 235
Query: 466 PLHV 477
L+V
Sbjct: 236 QLYV 239
Score = 46.8 bits (106), Expect = 1e-05
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = +3
Query: 3 SCRGNRSXPIDQHHRNXCQFCRXRKCLKMGMRREAVQ 113
+CRG + ID++ R+ C CR +KCL GM++EAVQ
Sbjct: 92 TCRGQNTCAIDRNSRSRCPSCRFQKCLSTGMKKEAVQ 128
>SB_51757| Best HMM Match : Hormone_recep (HMM E-Value=6.4e-37)
Length = 405
Score = 57.2 bits (132), Expect = 8e-09
Identities = 27/69 (39%), Positives = 43/69 (62%)
Frame = +1
Query: 280 VQPTNVMGIDNICELAARLLFSAVEWARNIPFFPELQGTDQXALLRVVWSELFVLNASQC 459
V+P + + +NI + A RLL +++ +ARN+P F L DQ LL W ELF+L+A+
Sbjct: 207 VEPIHFIVSENIQDAATRLLSASIRFARNVPCFTRLPFRDQIILLEEGWKELFLLDAAYW 266
Query: 460 SMPLHVGPL 486
++PL + L
Sbjct: 267 ALPLEIASL 275
Score = 32.7 bits (71), Expect = 0.20
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +3
Query: 6 CRGNRSXPIDQHHRNXCQFCRXRKCLKMGMR 98
C+ + + RN C+ CR +KC+++GM+
Sbjct: 60 CKAQNACSVKTTSRNECKACRMKKCVEVGMK 90
>SB_20447| Best HMM Match : zf-C4 (HMM E-Value=2.09999e-41)
Length = 419
Score = 51.6 bits (118), Expect = 4e-07
Identities = 24/71 (33%), Positives = 38/71 (53%)
Frame = +1
Query: 274 PCVQPTNVMGIDNICELAARLLFSAVEWARNIPFFPELQGTDQXALLRVVWSELFVLNAS 453
P + V +D + E A RLLF +++W ++I F L DQ ALL W+++F+L +
Sbjct: 260 PSLAGVQVFSMDYVYEFATRLLFVSIDWTQSISAFRALHKCDQIALLCKTWADIFLLGVA 319
Query: 454 QCSMPLHVGPL 486
Q + PL
Sbjct: 320 QSISNFPLSPL 330
Score = 44.4 bits (100), Expect = 6e-05
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = +3
Query: 3 SCRGNRSXPIDQHHRNXCQFCRXRKCLKMGMRRE 104
+CRG+ ID+ HRN CQ CR KCL GM++E
Sbjct: 77 TCRGSNDCFIDKVHRNRCQKCRFVKCLTAGMKKE 110
>SB_18088| Best HMM Match : zf-C4 (HMM E-Value=7.56701e-44)
Length = 1220
Score = 50.4 bits (115), Expect = 9e-07
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +3
Query: 3 SCRGNRSXPIDQHHRNXCQFCRXRKCLKMGMRREAV 110
+CRGN+ I+QH RN CQ+CR KC+K GM ++ +
Sbjct: 858 TCRGNQDCDINQHTRNRCQYCRFEKCVKSGMLKQGM 893
>SB_32228| Best HMM Match : zf-C4 (HMM E-Value=6.2e-23)
Length = 300
Score = 50.0 bits (114), Expect = 1e-06
Identities = 24/53 (45%), Positives = 33/53 (62%)
Frame = +1
Query: 295 VMGIDNICELAARLLFSAVEWARNIPFFPELQGTDQXALLRVVWSELFVLNAS 453
V+ +D + E A R+L+ V+W RNIP F +L DQ L+ WSELFVL +
Sbjct: 145 VVYMDMMYESAIRVLYMTVKWVRNIPTFLDLPFRDQAILIEESWSELFVLRTA 197
Score = 46.8 bits (106), Expect = 1e-05
Identities = 19/36 (52%), Positives = 22/36 (61%)
Frame = +3
Query: 6 CRGNRSXPIDQHHRNXCQFCRXRKCLKMGMRREAVQ 113
C+ PID RN CQ CR RKC +M M R+AVQ
Sbjct: 22 CKEKNDCPIDVARRNQCQACRLRKCFEMNMNRDAVQ 57
>SB_56305| Best HMM Match : zf-C4 (HMM E-Value=0)
Length = 553
Score = 49.2 bits (112), Expect = 2e-06
Identities = 19/38 (50%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = +3
Query: 3 SCRG-NRSXPIDQHHRNXCQFCRXRKCLKMGMRREAVQ 113
+CR + PID+ HRN CQ+CR +KC++ GM +EAV+
Sbjct: 233 TCRNLTKDCPIDKRHRNRCQYCRFQKCIQAGMIKEAVR 270
>SB_10105| Best HMM Match : zf-C4 (HMM E-Value=3.60001e-40)
Length = 370
Score = 48.0 bits (109), Expect = 5e-06
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = +3
Query: 6 CRGNRSXPIDQHHRNXCQFCRXRKCLKMGMRREAVQR 116
C G+ S +D+ +R CQ CR +KC +GMRREA++R
Sbjct: 58 CEGSGSCRVDKQNRTQCQACRFKKCATVGMRREAIRR 94
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = +1
Query: 334 LLFSAVEWARNIPFFPELQGTDQXALLRVVWSELFVLNASQCSMPLHVGPL 486
+L S ++W+R +P F L +Q ++LR W E+ +++A+Q + + PL
Sbjct: 152 ILVSTLDWSRRVPMFANLDVCEQYSVLRSRWCEMLIVSAAQYEVHIDGIPL 202
>SB_30131| Best HMM Match : zf-C4 (HMM E-Value=8.39938e-42)
Length = 311
Score = 46.4 bits (105), Expect = 1e-05
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = +3
Query: 3 SCRGNRSXPIDQHHRNXCQFCRXRKCLKMGMRREAVQR 116
+C+GN +D+ RN CQ CR +KCL++ M R AVQ+
Sbjct: 70 TCKGNGGCTVDKKRRNQCQACRFKKCLEVKMNRFAVQQ 107
>SB_5770| Best HMM Match : Hormone_recep (HMM E-Value=3.4e-22)
Length = 282
Score = 45.2 bits (102), Expect = 3e-05
Identities = 29/74 (39%), Positives = 37/74 (50%)
Frame = +1
Query: 250 SYPASRYSPCVQPTNVMGIDNICELAARLLFSAVEWARNIPFFPELQGTDQXALLRVVWS 429
S PAS + +ICE + L VEWA+++P F EL DQ ALLR S
Sbjct: 33 SRPASSPPESICLEKEANYSDICESMRQQLLILVEWAKHLPCFCELPLDDQVALLRAHAS 92
Query: 430 ELFVLNASQCSMPL 471
E VL S+ S+ L
Sbjct: 93 EHLVLGVSRRSLNL 106
>SB_4250| Best HMM Match : zf-C4 (HMM E-Value=2.3e-39)
Length = 79
Score = 44.8 bits (101), Expect = 5e-05
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +3
Query: 3 SCRGNRSXPIDQHHRNXCQFCRXRKCLKMGMRRE 104
SCR R+ I++ RN C+FCR RKC + GM++E
Sbjct: 45 SCRFQRNCVINKDKRNQCRFCRLRKCFRAGMKKE 78
>SB_12110| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 360
Score = 44.0 bits (99), Expect = 8e-05
Identities = 17/37 (45%), Positives = 28/37 (75%)
Frame = +3
Query: 3 SCRGNRSXPIDQHHRNXCQFCRXRKCLKMGMRREAVQ 113
+C ++S ID+++R CQ+CR +KCL +GM +EAV+
Sbjct: 49 ACVESKSCQIDKNNRIRCQYCRFQKCLALGMLKEAVR 85
>SB_9970| Best HMM Match : zf-C4 (HMM E-Value=9.4e-38)
Length = 259
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +1
Query: 307 DNICELAARLLFSAVEWARNIPFFPELQGTDQXALLR 417
+++CE AA+LLF +V+WARNIP F L DQ R
Sbjct: 188 ESVCEAAAKLLFMSVKWARNIPSFMSLPFRDQNTKYR 224
Score = 37.1 bits (82), Expect = 0.009
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 12 GNRSXPIDQHHRNXCQFCRXRKCLKMGMRRE 104
G + P+D+ HRN C+ CR +KC + M ++
Sbjct: 49 GKGNCPVDKIHRNQCRSCRLKKCFDVSMNKD 79
>SB_58064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1027
Score = 37.5 bits (83), Expect = 0.007
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +3
Query: 6 CRGNRSXPIDQHHRNXCQFCRXRKCLKMGMRREAVQ 113
C + +D+ RN CQ CR KCL +GM++ AVQ
Sbjct: 773 CMFRETCIVDKVLRNRCQKCRMDKCLAVGMQKSAVQ 808
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 32.3 bits (70), Expect = 0.26
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = -3
Query: 309 VYAHDVRWLDAWTVSRGGVAPPA---VXAICTTRDM 211
VYAH VR+L AW G APP V C+TRD+
Sbjct: 168 VYAH-VRYLKAWVQGIMGAAPPTPPPVTGECSTRDL 202
>SB_36879| Best HMM Match : Hormone_recep (HMM E-Value=0)
Length = 358
Score = 31.5 bits (68), Expect = 0.45
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +3
Query: 3 SC-RGNRSX-PIDQHHRNXCQFCRXRKCLKMGMRREAVQR 116
SC R N++ P+D++ R CQ CR ++C GM V++
Sbjct: 44 SCVRSNQNQCPMDKNSRAKCQACRLQRCFDAGMVLNGVRK 83
Score = 30.7 bits (66), Expect = 0.79
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 349 VEWARNIPFFPELQGTDQXALLRVVWSELFVLNASQCSMPL 471
V+WA+ +P F +L DQ LL EL V S+PL
Sbjct: 177 VDWAKLVPGFKDLCQEDQITLLTAAGMELVVFRVIFRSIPL 217
>SB_37830| Best HMM Match : Peptidase_C54 (HMM E-Value=3.3e-11)
Length = 878
Score = 25.0 bits (52), Expect(2) = 0.77
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 244 GRSYPASRYSPCVQPTNVMGI 306
G+ YP ++YSP + T+ GI
Sbjct: 655 GKYYPYTKYSPMLSKTSAPGI 675
Score = 24.2 bits (50), Expect(2) = 0.77
Identities = 13/62 (20%), Positives = 27/62 (43%)
Frame = +1
Query: 334 LLFSAVEWARNIPFFPELQGTDQXALLRVVWSELFVLNASQCSMPLHVGPLTXRRGTAPS 513
LL E + + F G + ++++ + V++AS C L V + + +P
Sbjct: 712 LLTEPGEQSASFTIFGSHSGHHRWTIVQINLRRVLVMSASDCRSALDVSLMGFHQPLSPP 771
Query: 514 PI 519
P+
Sbjct: 772 PV 773
>SB_11498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 122
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +3
Query: 213 YLSSYISLXLRAELPRLEIQSMRPTNERHGHRQHLRARCQTAFLRRRMGEKHPLLPRT 386
Y + + L+A +P ++ +RP E++GHR L R + + EK +L +T
Sbjct: 63 YRYELVEIMLKAGIPLAKVDVLRPFLEKYGHR--LTTRSHLSEFIPLISEKEKMLIKT 118
>SB_5110| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 109
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +3
Query: 213 YLSSYISLXLRAELPRLEIQSMRPTNERHGHRQHLRARCQTAFLRRRMGEKHPLLPRT 386
Y + + L+A +P ++ +RP E++GHR L R + + EK +L +T
Sbjct: 4 YRYELVEIMLKAGIPLAKVNVLRPFLEKYGHR--LTTRSHLSEFIPLISEKEKMLIKT 59
>SB_30569| Best HMM Match : 3-alpha (HMM E-Value=6)
Length = 160
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 213 YLSSYISLXLRAELPRLEIQSMRPTNERHGHR 308
Y + + L+A +P +I +RP E++GHR
Sbjct: 110 YRYELVGIMLKAGIPLAKIDVLRPLLEKYGHR 141
>SB_27584| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 7381
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +3
Query: 207 HPYLSSYISLX-LRAELPRLEIQSMRPTNERHGHRQHLRARCQTAFLRRRMGEK 365
H ++S + + + P +RP +RH + + ARC+ + RRR G +
Sbjct: 7154 HSHISMRVEVYGCYSNAPEASPPKLRPVIKRHRYSVQIVARCRWSIRRRRAGTR 7207
>SB_56020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 27.9 bits (59), Expect = 5.6
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 213 YLSSYISLXLRAELPRLEIQSMRPTNERHGHRQHLRARCQTAFLRRRMGEKHPLLPRT 386
Y + L+A +P ++ +RP E++GHR L R + + EK +L +T
Sbjct: 68 YRYELVEKMLKAGIPLAKVDVLRPLLEKYGHR--LTTRSHLSEFIPLISEKENMLIKT 123
>SB_9343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +2
Query: 14 KQEXPH*PAP*KPXSVLQTKEMSQNGHEKRSCPKRSSASIAAARPGT 154
K+E P P P KP TK K+S KRS+ S A+ T
Sbjct: 502 KKEPPAKPKPVKPPKQQATKTPKAEKPPKKSASKRSAKSKIVAKKKT 548
>SB_40929| Best HMM Match : Attractin (HMM E-Value=5.1)
Length = 566
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +2
Query: 371 PSSPNCKVRTKXPY*GSSGRNCSC*TPLSAP 463
PS CK +T P + R SC T S P
Sbjct: 506 PSQARCKTKTSNPQDKQAARQASCKTKTSKP 536
>SB_12193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 457
Score = 27.5 bits (58), Expect = 7.3
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = +3
Query: 213 YLSSYISLXLRAELPRLEIQSMRPTNERHGHRQHLRARCQTAFLRRRMGEKHPLLPRT 386
Y + + L+ +P ++ +RP E++GHR L R + + EK +L +T
Sbjct: 341 YRYELVEIMLKPGIPLAKVDVLRPFLEKYGHR--LTTRSHLSEFIPLISEKEKMLIKT 396
>SB_58730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1014
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -2
Query: 172 RVNWPGSPRPGGCDGGTXPLWTASL 98
R +WP PGG GG W +SL
Sbjct: 644 RADWPYGLSPGGLPGGAMFPWESSL 668
>SB_34086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 890
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 369 DVSRPFDGGEKQSGSELAD 313
D+S PF G KQ+G +LAD
Sbjct: 191 DISDPFKKGSKQAGFKLAD 209
>SB_31180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 407
Score = 27.1 bits (57), Expect = 9.7
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -3
Query: 66 CRTDXGFYGAGQWGXSCFLC 7
C+T GFYG W C +C
Sbjct: 22 CKTGCGFYGNPAWQGYCSVC 41
>SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1755
Score = 27.1 bits (57), Expect = 9.7
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 7 AEETGAAPLTSTIETXVSSADXGNVSKWA*EEKLSKE 117
AEET A + IE V++A S+W E +++KE
Sbjct: 1570 AEETSARDIEQEIEVAVTNAVAEARSQWEKEAEINKE 1606
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,869,568
Number of Sequences: 59808
Number of extensions: 342181
Number of successful extensions: 803
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 797
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1215643300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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