Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0650
         (430 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    22   2.8  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   5.0  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa
          decarboxylase protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 3  LILYVSLYLVTIVDRRII 56
          +I YVS YL  I DRR++
Sbjct: 13 MIDYVSGYLENIRDRRVL 30


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 372 NMGHSMGSTKTMTGAWNA 425
           +MG+SMGS    + A++A
Sbjct: 329 SMGYSMGSAYDQSSAYDA 346


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,913
Number of Sequences: 336
Number of extensions: 1430
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9460170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)