Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0638
(367 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 125 1e-29
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 120 3e-28
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 120 3e-28
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 119 8e-28
SB_56| Best HMM Match : Actin (HMM E-Value=0) 119 8e-28
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 118 2e-27
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 57 4e-09
SB_54| Best HMM Match : Actin (HMM E-Value=0) 57 4e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 49 1e-06
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 9e-06
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 6e-04
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.22
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.22
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.50
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 29 1.5
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.0
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.0
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.7
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 28 2.7
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 28 2.7
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.7
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 28 2.7
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 28 2.7
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.7
SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.5
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.5
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 27 3.5
SB_10020| Best HMM Match : Extensin_2 (HMM E-Value=0.88) 27 6.2
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 26 8.1
SB_30230| Best HMM Match : CH (HMM E-Value=0.0035) 26 8.1
SB_26308| Best HMM Match : Drf_FH1 (HMM E-Value=1.6) 26 8.1
SB_14615| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.1
SB_9298| Best HMM Match : rve (HMM E-Value=4.8e-35) 26 8.1
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 26 8.1
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.1
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.1
SB_35722| Best HMM Match : CutA1 (HMM E-Value=8.3) 26 8.1
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 26 8.1
SB_21813| Best HMM Match : CutA1 (HMM E-Value=8.3) 26 8.1
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 26 8.1
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 26 8.1
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 26 8.1
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 26 8.1
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 125 bits (301), Expect = 1e-29
Identities = 56/62 (90%), Positives = 60/62 (96%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHR 261
MCD++VAALVVDNGSGMC AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 AK 267
+K
Sbjct: 61 SK 62
Score = 83.0 bits (196), Expect = 7e-17
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKILHHTFYNEL 365
AQSKRGILTLKYPIEHGIVTNWDDMEKI HHTFYNEL
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 95
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 120 bits (290), Expect = 3e-28
Identities = 55/62 (88%), Positives = 59/62 (95%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHR 261
M D+E+AALVVDNGSGMC AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE +
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 AK 267
+K
Sbjct: 61 SK 62
Score = 83.0 bits (196), Expect = 7e-17
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKILHHTFYNEL 365
AQSKRGILTLKYPIEHGIVTNWDDMEKI HHTFYNEL
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 95
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 120 bits (290), Expect = 3e-28
Identities = 53/62 (85%), Positives = 59/62 (95%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHR 261
M D+++AALV+DNGSGMC AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE +
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 AK 267
+K
Sbjct: 61 SK 62
Score = 83.0 bits (196), Expect = 7e-17
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKILHHTFYNEL 365
AQSKRGILTLKYPIEHGIVTNWDDMEKI HHTFYNEL
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 95
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 119 bits (286), Expect = 8e-28
Identities = 53/60 (88%), Positives = 58/60 (96%)
Frame = +1
Query: 88 DEEVAALVVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
D++VAALV+DNGSGMC AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE ++K
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 68.9 bits (161), Expect = 1e-12
Identities = 30/33 (90%), Positives = 31/33 (93%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKILHHTF 353
AQSKRGILTLKYPIEHGIVTNWDDMEKI+ TF
Sbjct: 58 AQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 119 bits (286), Expect = 8e-28
Identities = 54/60 (90%), Positives = 58/60 (96%)
Frame = +1
Query: 88 DEEVAALVVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
++EVAALVVDNGSGMC AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE ++K
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 83.0 bits (196), Expect = 7e-17
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKILHHTFYNEL 365
AQSKRGILTLKYPIEHGIVTNWDDMEKI HHTFYNEL
Sbjct: 58 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 94
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 118 bits (283), Expect = 2e-27
Identities = 53/60 (88%), Positives = 58/60 (96%)
Frame = +1
Query: 88 DEEVAALVVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
+++VAALVVDNGSGMC AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE ++K
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 83.0 bits (196), Expect = 7e-17
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKILHHTFYNEL 365
AQSKRGILTLKYPIEHGIVTNWDDMEKI HHTFYNEL
Sbjct: 58 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL 94
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 57.2 bits (132), Expect = 4e-09
Identities = 26/39 (66%), Positives = 28/39 (71%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRHQ 207
E LV+D GS M GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 57.2 bits (132), Expect = 4e-09
Identities = 22/34 (64%), Positives = 29/34 (85%)
Frame = +1
Query: 106 LVVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRHQ 207
+V+DNGSG C AG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 48.8 bits (111), Expect = 1e-06
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +1
Query: 76 FKMCDEEVAALVVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRHQGVMVG 222
FK+ A+V+DNG G+ GFAGD PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 46.0 bits (104), Expect = 9e-06
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = +1
Query: 100 AALVVDNGSGMCXAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE 255
+ +V DNG+G G+AG + P +FPS+VGRP R + + KD VGDE
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDE 60
Score = 39.1 bits (87), Expect = 0.001
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKILHHTF 353
A R +L + YP+++GIV NWDDM+ + +TF
Sbjct: 61 ASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTF 93
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 39.9 bits (89), Expect = 6e-04
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = -2
Query: 204 MAGPSXDRGEHGARSIISCETGXAHTGAIVYYQRGNFFV 88
MA + D GE+G+ SI+S ETG AHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.22
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 179 GNTARGASSPAKPALHIPEPLSTT 108
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.22
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 179 GNTARGASSPAKPALHIPEPLSTT 108
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 0.50
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 179 GNTARGASSPAKPALHIPEPLSTT 108
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 28.7 bits (61), Expect = 1.5
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 285 KYPIEHGIVTNWDDMEKILHHTFYNEL 365
K+PI H IV +WD ME+ + L
Sbjct: 299 KWPIRHAIVEDWDLMERFWEQCIFKYL 325
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 2.0
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 179 GNTARGASSPAKPALHIPEPLSTT 108
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 2.0
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 179 GNTARGASSPAKPALHIPEPLSTT 108
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 27.9 bits (59), Expect = 2.7
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -2
Query: 237 VLLSHTDHHALMAGPSXDRGEHGARSIISCET 142
V+LSH + H M D +HG RS SCET
Sbjct: 419 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCET 449
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 27.9 bits (59), Expect = 2.7
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -2
Query: 237 VLLSHTDHHALMAGPSXDRGEHGARSIISCET 142
V+LSH + H M D +HG RS SCET
Sbjct: 282 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCET 312
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 27.9 bits (59), Expect = 2.7
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -2
Query: 237 VLLSHTDHHALMAGPSXDRGEHGARSIISCET 142
V+LSH + H M D +HG RS SCET
Sbjct: 260 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCET 290
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 27.9 bits (59), Expect = 2.7
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -2
Query: 237 VLLSHTDHHALMAGPSXDRGEHGARSIISCET 142
V+LSH + H M D +HG RS SCET
Sbjct: 102 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCET 132
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 27.9 bits (59), Expect = 2.7
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -2
Query: 237 VLLSHTDHHALMAGPSXDRGEHGARSIISCET 142
V+LSH + H M D +HG RS SCET
Sbjct: 102 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCET 132
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 27.9 bits (59), Expect = 2.7
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -2
Query: 237 VLLSHTDHHALMAGPSXDRGEHGARSIISCET 142
V+LSH + H M D +HG RS SCET
Sbjct: 224 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCET 254
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 27.9 bits (59), Expect = 2.7
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -2
Query: 237 VLLSHTDHHALMAGPSXDRGEHGARSIISCET 142
V+LSH + H M D +HG RS SCET
Sbjct: 136 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCET 166
>SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 334
Score = 27.5 bits (58), Expect = 3.5
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1
Query: 313 VTIPCSMGYLRVRIPLLLCAHLLHKSPSVP 224
V PC M LRVR+ C +LH + P
Sbjct: 60 VACPCCMSLLRVRVVCPCCMSVLHVRVACP 89
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 3.5
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 194 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 84
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 27.5 bits (58), Expect = 3.5
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 237 VLLSHTDHHALMAGPSXDRGEHGARSIISCET 142
++LSH + H M D +HG RS SCET
Sbjct: 184 IVLSHLNSHTAMNNILSDL-QHGFRSGFSCET 214
>SB_10020| Best HMM Match : Extensin_2 (HMM E-Value=0.88)
Length = 379
Score = 26.6 bits (56), Expect = 6.2
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = -1
Query: 304 PCSMGYLRV-RIPLLLCAHLLHKSPSVPYRP 215
P S Y + RIP LC L PS PY+P
Sbjct: 269 PLSYSYKPLPRIPSSLCLLSLQAPPSYPYKP 299
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 26.2 bits (55), Expect = 8.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 237 VLLSHTDHHALMAGPSXDRGEHGARSIISCET 142
++LSH + H L A +HG R +SCET
Sbjct: 253 IVLSHLNKH-LAANNILSIFQHGFRQALSCET 283
>SB_30230| Best HMM Match : CH (HMM E-Value=0.0035)
Length = 2440
Score = 26.2 bits (55), Expect = 8.1
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +2
Query: 146 SQEMMLLAPCSPRSXEGPAIRA*WSVWDRRTLM*EMSTEQKRYPDPQIPHRTRNR 310
S E + APCSPRS P I + R + + E TE+ ++ D + + R
Sbjct: 803 SLESSIEAPCSPRSASKPVISGEMNGGPRASHVIE-ETEEGQFDDDGVEDQLSGR 856
>SB_26308| Best HMM Match : Drf_FH1 (HMM E-Value=1.6)
Length = 184
Score = 26.2 bits (55), Expect = 8.1
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Frame = -3
Query: 200 RGLPTIE----GNTARGASSPAKPALHIPEPLSTTNAATSSS 87
RG P I NT+RG PA P + PL+ +S+S
Sbjct: 119 RGTPPIREDGYANTSRGDRGPASPHSFLSSPLNLRKQPSSAS 160
>SB_14615| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 185
Score = 26.2 bits (55), Expect = 8.1
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -3
Query: 182 EGNTARGASSP-AKPALHIPEPLSTTNAATSS 90
+G T R SS A+P L++P P S T ++ SS
Sbjct: 79 DGGTNRTRSSASAEPTLNLPSPPSKTPSSASS 110
>SB_9298| Best HMM Match : rve (HMM E-Value=4.8e-35)
Length = 1514
Score = 26.2 bits (55), Expect = 8.1
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -1
Query: 286 LRVRIPLLLCAHLLHKSPSVPYRPSRPDGGAFXR 185
L+ R+ L LC ++ +S V Y GG F R
Sbjct: 1128 LKTRLDLWLCGTIIQQSGPVSYVVKLSSGGVFRR 1161
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 26.2 bits (55), Expect = 8.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 237 VLLSHTDHHALMAGPSXDRGEHGARSIISCET 142
++LSH + H L A +HG R +SCET
Sbjct: 114 IVLSHLNKH-LAANNILSIFQHGFRQALSCET 144
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 26.2 bits (55), Expect = 8.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 237 VLLSHTDHHALMAGPSXDRGEHGARSIISCET 142
++LSH + H L A +HG R +SCET
Sbjct: 1652 IVLSHLNKH-LAANNILSIFQHGFRQALSCET 1682
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 26.2 bits (55), Expect = 8.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 237 VLLSHTDHHALMAGPSXDRGEHGARSIISCET 142
++LSH + H L A +HG R +SCET
Sbjct: 680 IVLSHLNKH-LAANNILSIFQHGFRQALSCET 710
>SB_35722| Best HMM Match : CutA1 (HMM E-Value=8.3)
Length = 171
Score = 26.2 bits (55), Expect = 8.1
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -3
Query: 182 EGNTARGASSP-AKPALHIPEPLSTTNAATSS 90
+G T R SS A+P L++P P S T ++ SS
Sbjct: 79 DGGTNRTRSSASAEPTLNLPSPPSKTPSSASS 110
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 26.2 bits (55), Expect = 8.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 237 VLLSHTDHHALMAGPSXDRGEHGARSIISCET 142
++LSH + H L A +HG R +SCET
Sbjct: 235 IVLSHLNKH-LAANNILSIFQHGFRQALSCET 265
>SB_21813| Best HMM Match : CutA1 (HMM E-Value=8.3)
Length = 200
Score = 26.2 bits (55), Expect = 8.1
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -3
Query: 182 EGNTARGASSP-AKPALHIPEPLSTTNAATSS 90
+G T R SS A+P L++P P S T ++ SS
Sbjct: 79 DGGTNRTRSSASAEPTLNLPSPPSKTPSSASS 110
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 26.2 bits (55), Expect = 8.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 237 VLLSHTDHHALMAGPSXDRGEHGARSIISCET 142
++LSH + H L A +HG R +SCET
Sbjct: 1090 IVLSHLNKH-LAANNILSIFQHGFRQALSCET 1120
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 26.2 bits (55), Expect = 8.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 237 VLLSHTDHHALMAGPSXDRGEHGARSIISCET 142
++LSH + H L A +HG R +SCET
Sbjct: 33 IVLSHLNKH-LAANNILSIFQHGFRQALSCET 63
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 26.2 bits (55), Expect = 8.1
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +3
Query: 291 PIEHGIVTNWDDMEKILHHTF 353
PI+ G++ +WD EKIL + +
Sbjct: 3 PIKDGMIEDWDLFEKILDYIY 23
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 26.2 bits (55), Expect = 8.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 237 VLLSHTDHHALMAGPSXDRGEHGARSIISCET 142
++LSH + H L A +HG R +SCET
Sbjct: 114 IVLSHLNKH-LAANNILSIFQHGFRQALSCET 144
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,534,615
Number of Sequences: 59808
Number of extensions: 232646
Number of successful extensions: 590
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 590
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 582596255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -