Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0638
(367 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 103 5e-23
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 103 5e-23
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 103 5e-23
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 103 5e-23
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 103 5e-23
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 103 5e-23
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 99 1e-21
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 99 1e-21
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 99 1e-21
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 97 2e-21
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 67 4e-12
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 64 2e-11
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 55 2e-08
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 54 2e-08
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 48 1e-06
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 43 7e-05
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 34 0.025
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.033
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 31 0.23
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 30 0.41
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 2.9
At2g05290.1 68415.m00557 expressed protein similar to zinc finge... 27 2.9
At4g30070.1 68417.m04277 plant defensin-fusion protein, putative... 27 3.8
At1g55380.1 68414.m06334 DC1 domain-containing protein contains ... 27 5.0
At3g48860.2 68416.m05337 expressed protein 26 6.7
At3g48860.1 68416.m05336 expressed protein 26 6.7
At3g07870.1 68416.m00962 F-box family protein contains F-box dom... 26 6.7
At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin ... 26 6.7
At1g55420.1 68414.m06339 DC1 domain-containing protein contains ... 26 6.7
At2g22450.1 68415.m02662 riboflavin biosynthesis protein, putati... 26 8.8
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 103 bits (246), Expect = 5e-23
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
E++ LV DNG+GM AGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDE ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 81.0 bits (191), Expect = 2e-16
Identities = 35/37 (94%), Positives = 35/37 (94%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKILHHTFYNEL 365
AQSKRGILTLKYPIEHGIV NWDDMEKI HHTFYNEL
Sbjct: 60 AQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNEL 96
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 103 bits (246), Expect = 5e-23
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
E++ LV DNG+GM AGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDE ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 81.4 bits (192), Expect = 2e-16
Identities = 35/37 (94%), Positives = 36/37 (97%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKILHHTFYNEL 365
AQSKRGILTLKYPIEHGIV+NWDDMEKI HHTFYNEL
Sbjct: 60 AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNEL 96
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 103 bits (246), Expect = 5e-23
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
E++ LV DNG+GM AGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDE ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 81.0 bits (191), Expect = 2e-16
Identities = 35/37 (94%), Positives = 35/37 (94%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKILHHTFYNEL 365
AQSKRGILTLKYPIEHGIV NWDDMEKI HHTFYNEL
Sbjct: 60 AQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNEL 96
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 103 bits (246), Expect = 5e-23
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
E++ LV DNG+GM AGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDE ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 81.0 bits (191), Expect = 2e-16
Identities = 35/37 (94%), Positives = 35/37 (94%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKILHHTFYNEL 365
AQSKRGILTLKYPIEHGIV NWDDMEKI HHTFYNEL
Sbjct: 60 AQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNEL 96
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 103 bits (246), Expect = 5e-23
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
E++ LV DNG+GM AGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDE ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 81.4 bits (192), Expect = 2e-16
Identities = 35/37 (94%), Positives = 36/37 (97%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKILHHTFYNEL 365
AQSKRGILTLKYPIEHGIV+NWDDMEKI HHTFYNEL
Sbjct: 60 AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNEL 96
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 103 bits (246), Expect = 5e-23
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
E++ LV DNG+GM AGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDE ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 81.0 bits (191), Expect = 2e-16
Identities = 35/37 (94%), Positives = 35/37 (94%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKILHHTFYNEL 365
AQSKRGILTLKYPIEHGIV NWDDMEKI HHTFYNEL
Sbjct: 60 AQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNEL 96
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 98.7 bits (235), Expect = 1e-21
Identities = 42/59 (71%), Positives = 51/59 (86%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
+++ +V DNG+GM AGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDE ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 81.0 bits (191), Expect = 2e-16
Identities = 34/37 (91%), Positives = 36/37 (97%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKILHHTFYNEL 365
AQSKRGILTLKYPIEHG+V+NWDDMEKI HHTFYNEL
Sbjct: 60 AQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNEL 96
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 98.7 bits (235), Expect = 1e-21
Identities = 42/59 (71%), Positives = 51/59 (86%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
+++ +V DNG+GM AGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDE ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 81.0 bits (191), Expect = 2e-16
Identities = 34/37 (91%), Positives = 36/37 (97%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKILHHTFYNEL 365
AQSKRGILTLKYPIEHG+V+NWDDMEKI HHTFYNEL
Sbjct: 60 AQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNEL 96
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 98.7 bits (235), Expect = 1e-21
Identities = 42/59 (71%), Positives = 51/59 (86%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
+++ +V DNG+GM AGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDE ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 81.0 bits (191), Expect = 2e-16
Identities = 34/37 (91%), Positives = 36/37 (97%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKILHHTFYNEL 365
AQSKRGILTLKYPIEHG+V+NWDDMEKI HHTFYNEL
Sbjct: 60 AQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNEL 96
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 97.5 bits (232), Expect = 2e-21
Identities = 42/59 (71%), Positives = 52/59 (88%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
+E A+V DNG+GM AGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDE +A+
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQAR 64
Score = 77.0 bits (181), Expect = 4e-15
Identities = 31/37 (83%), Positives = 36/37 (97%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKILHHTFYNEL 365
AQ++RGIL+LKYPIEHG+V+NWDDMEKI HHTFYNEL
Sbjct: 61 AQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNEL 97
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 66.9 bits (156), Expect = 4e-12
Identities = 26/37 (70%), Positives = 34/37 (91%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKILHHTFYNEL 365
A+++ GILTL YP+EHG+V+NWDDMEKI +HTFY+EL
Sbjct: 15 AEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSEL 51
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 64.5 bits (150), Expect = 2e-11
Identities = 31/52 (59%), Positives = 35/52 (67%)
Frame = +3
Query: 210 RDGRYGTEGLLCRR*AQSKRGILTLKYPIEHGIVTNWDDMEKILHHTFYNEL 365
RDG E + + R ILTLK P+EHGIV NWDDMEKI H+TFYNEL
Sbjct: 35 RDGLNPNESYVGEE-GHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNEL 85
Score = 59.3 bits (137), Expect = 8e-10
Identities = 28/53 (52%), Positives = 35/53 (66%)
Frame = +1
Query: 106 LVVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRA 264
+V D G GM AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E A
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHA 51
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 54.8 bits (126), Expect = 2e-08
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCXAGFAGDDAPRAVFPSIVG 192
+EV+A+VVD GS C AG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
Score = 29.5 bits (63), Expect = 0.72
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 264 KRGILTLKYPIEHGIVTNWDDMEKILHHTFYN 359
+R + + P + GIVT+WD ++ + H F N
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRN 110
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 54.4 bits (125), Expect = 2e-08
Identities = 22/34 (64%), Positives = 30/34 (88%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCXAGFAGDDAPRAVFPSIVG 192
+EV+A+VVD GS C AG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 28.3 bits (60), Expect = 1.7
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 264 KRGILTLKYPIEHGIVTNWDDMEKILHHTF 353
+R + + PI+ GIV++WD ++ I H F
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAF 114
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 48.4 bits (110), Expect = 1e-06
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +3
Query: 276 LTLKYPIEHGIVTNWDDMEKILHHTFYNEL 365
L + YP+ +GIV NWDDME + H FYNEL
Sbjct: 66 LDINYPVHNGIVQNWDDMEHVWDHAFYNEL 95
Score = 46.8 bits (106), Expect = 4e-06
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Frame = +1
Query: 106 LVVDNGSGMCXAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGD 252
+V DNG+G GFAG++ P +VFP +VGRP R++ ++ KD VG+
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGE 57
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 42.7 bits (96), Expect = 7e-05
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +1
Query: 106 LVVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 252
+V+DNG+ G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 34.3 bits (75), Expect = 0.025
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 282 LKYPIEHGIVTNWDDMEKILHHTFYNEL 365
L YPIEHG V +WD ME+ +N L
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYL 113
Score = 33.5 bits (73), Expect = 0.044
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 103 ALVVDNGSGMCXAGFAGDDAPRAVFPSIV 189
A+V+DNG+G GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.033
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -3
Query: 227 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 90
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 31.1 bits (67), Expect = 0.23
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 291 PIEHGIVTNWDDMEKILHHTFYNEL 365
PIE G++ +WD ME +L + Y L
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGL 81
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 30.3 bits (65), Expect = 0.41
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 106 LVVDNGSGMCXAGFAGDDAPRAVFPSIVGRP 198
+V+DNG G+ AG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 2.9
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -3
Query: 203 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 81
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At2g05290.1 68415.m00557 expressed protein similar to zinc finger
protein [Arabidopsis thaliana] GI:976277
Length = 383
Score = 27.5 bits (58), Expect = 2.9
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -1
Query: 307 IPCSMGYLRVRIPLLLCAHLLHKSPSVPYRPS 212
+ + Y R+R C L H+ P PY PS
Sbjct: 193 VKIGIDYERIRKRCFQCQRLTHEKPRCPYLPS 224
>At4g30070.1 68417.m04277 plant defensin-fusion protein, putative
contains a C-terminal plant defensin domain, personal
communication, Bart Thomma
(Bart.Thomma@agr.kuleuven.ac.be)
Length = 129
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 280 VRIPLLLCAHLLHKSPSVPYRPSRPDGGA 194
V +PL C + PS P P + DGGA
Sbjct: 59 VGVPLCKCYYECESPPSPPAPPKKCDGGA 87
>At1g55380.1 68414.m06334 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 661
Score = 26.6 bits (56), Expect = 5.0
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 343 CKIFSMSSQXVTIPCSMGYLRVRIPLLLC 257
CK F + + T+PC Y+ R P+ LC
Sbjct: 506 CKSF-LGIKCATLPCEAHYIHDRHPITLC 533
>At3g48860.2 68416.m05337 expressed protein
Length = 577
Score = 26.2 bits (55), Expect = 6.7
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -3
Query: 182 EGNTARGASSPAKPALHIPEPLSTTNAATSSSH 84
E + R AS+ KPA H P +S+T + +S+ +
Sbjct: 82 EDLSLRFASASLKPARHAPSSISSTGSNSSNGN 114
>At3g48860.1 68416.m05336 expressed protein
Length = 494
Score = 26.2 bits (55), Expect = 6.7
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -3
Query: 182 EGNTARGASSPAKPALHIPEPLSTTNAATSSSH 84
E + R AS+ KPA H P +S+T + +S+ +
Sbjct: 82 EDLSLRFASASLKPARHAPSSISSTGSNSSNGN 114
>At3g07870.1 68416.m00962 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 26.2 bits (55), Expect = 6.7
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -3
Query: 203 WRGLPTIEGNTARGASSPAKPA--LHIPEPL 117
WR + T G + +SSP KP LH P+
Sbjct: 55 WRSVLTQHGRLSSSSSSPTKPCLLLHCDSPI 85
>At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin
family protein / PAN domain-containing protein contains
Pfam profiles: PF01453 lectin (probable mannose
binding), PF00024 PAN domain
Length = 764
Score = 26.2 bits (55), Expect = 6.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRHQGVM 216
E++ A + + G G+C A +D + V I GR +GV+
Sbjct: 632 EDLEAKLTEYGFGLCAADKDVEDFGKTVLALITGRYEPEGVV 673
>At1g55420.1 68414.m06339 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 725
Score = 26.2 bits (55), Expect = 6.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 343 CKIFSMSSQXVTIPCSMGYLRVRIPLLLC 257
CK F + + T+PC Y R PL LC
Sbjct: 545 CKSF-LGIKCATLPCEAHYTHDRHPLTLC 572
>At2g22450.1 68415.m02662 riboflavin biosynthesis protein, putative
similar to SP|P50855 Riboflavin biosynthesis protein
ribA [Includes: GTP cyclohydrolase II (EC 3.5.4.25);
3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP
synthase)] {Actinobacillus pleuropneumoniae}; contains
Pfam profiles PF00925: GTP cyclohydrolase II, PF00926:
3,4-dihydroxy-2-butanone 4-phosphate synthase
Length = 476
Score = 25.8 bits (54), Expect = 8.8
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 94 EVAALVVDNGSGMCXAGFAGDDAPRAVFPSIVGR 195
E A VV +G+G+ G+D R P +V R
Sbjct: 146 EAMAFVVKHGTGIVCVSMKGEDLERLELPLMVTR 179
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,860,350
Number of Sequences: 28952
Number of extensions: 154960
Number of successful extensions: 401
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 401
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 477939072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -