Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0634
         (447 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g15870.1 68416.m02007 fatty acid desaturase family protein si...    36   0.012
At1g06080.1 68414.m00637 delta 9 desaturase (ADS1) identical to ...    31   0.35 
At1g06120.1 68414.m00641 fatty acid desaturase family protein si...    30   0.62 
At1g06090.1 68414.m00638 fatty acid desaturase family protein si...    30   0.62 
At2g31360.1 68415.m03831 delta 9 desaturase (ADS2) identical to ...    30   0.82 
At1g06360.1 68414.m00672 fatty acid desaturase family protein si...    28   2.5  
At1g06350.1 68414.m00671 fatty acid desaturase family protein si...    28   3.3  
At1g06100.1 68414.m00639 fatty acid desaturase family protein si...    28   3.3  
At4g33690.1 68417.m04785 expressed protein                             27   5.8  
At3g51190.1 68416.m05604 60S ribosomal protein L8 (RPL8B) riboso...    27   5.8  
At3g18360.1 68416.m02335 VQ motif-containing protein contains PF...    27   5.8  
At3g15850.1 68416.m02005 fatty acid desaturase family protein si...    27   5.8  

>At3g15870.1 68416.m02007 fatty acid desaturase family protein
           similar to delta 9 acyl-lipid desaturase (ADS1)
           GI:2970034 from [Arabidopsis thaliana]
          Length = 292

 Score = 35.9 bits (79), Expect = 0.012
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +1

Query: 334 VRHHRLHHAHFATENDPFDYNQGFAYAHI 420
           V +HR HH H  T+ DP    QGF ++H+
Sbjct: 105 VSNHRYHHKHCETQRDPHSPTQGFWFSHM 133


>At1g06080.1 68414.m00637 delta 9 desaturase (ADS1) identical to
           delta 9 acyl-lipid desaturase (ADS1) GB:BAA25180
           GI:2970034 from [Arabidopsis thaliana]
          Length = 305

 Score = 31.1 bits (67), Expect = 0.35
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +1

Query: 316 GPIYNXVRHHRLHHAHFATENDPFDYNQGFAYAHI 420
           G   + V  HR HH    ++ DP   N+GF ++H+
Sbjct: 111 GDPIDWVSTHRYHHQFTDSDRDPHSPNEGFWFSHL 145


>At1g06120.1 68414.m00641 fatty acid desaturase family protein
           similar to delta 9 acyl-lipid desaturase GB:BAA25180
           GI:2970034 (ADS1) from [Arabidopsis thaliana]; supported
           by cDNA:gi_12083275_gb_AF332434.1_AF332434
          Length = 299

 Score = 30.3 bits (65), Expect = 0.62
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 334 VRHHRLHHAHFATENDPFDYNQGFAYAHIF 423
           V  HR HH    ++ DP    +GF ++H+F
Sbjct: 111 VSTHRFHHQFTDSDRDPHSPIEGFWFSHVF 140


>At1g06090.1 68414.m00638 fatty acid desaturase family protein
           similar to delta 9 acyl-lipid desaturase GB:BAA25180
           GI:2970034 (ADS1) from [Arabidopsis thaliana]
          Length = 299

 Score = 30.3 bits (65), Expect = 0.62
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 334 VRHHRLHHAHFATENDPFDYNQGFAYAHIF 423
           V  HR HH    ++ DP    +GF ++H+F
Sbjct: 111 VSTHRFHHQFTDSDRDPHSPIEGFWFSHVF 140


>At2g31360.1 68415.m03831 delta 9 desaturase (ADS2) identical to
           delta 9 acyl-lipid desaturase (ADS2) GI:2970036 from
           [Arabidopsis thaliana]
          Length = 307

 Score = 29.9 bits (64), Expect = 0.82
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 316 GPIYNXVRHHRLHHAHFATENDPFDYNQGFAYAHI 420
           G   + V  HR HH    +E DP    +GF ++H+
Sbjct: 113 GDPIDWVSTHRYHHQFTDSERDPHSPKEGFWFSHL 147


>At1g06360.1 68414.m00672 fatty acid desaturase family protein
           similar to delta 9 acyl-lipid desaturase (ADS1)
           GI:2970034 from [Arabidopsis thaliana]
          Length = 299

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +1

Query: 316 GPIYNXVRHHRLHHAHFATENDPFDYNQGFAYAHIF 423
           G   + V  HR HH    ++ DP    +GF ++H++
Sbjct: 105 GDPLDWVSIHRFHHQFTDSDRDPHSPIEGFWFSHVW 140


>At1g06350.1 68414.m00671 fatty acid desaturase family protein
           similar to delta 9 acyl-lipid desaturase (ADS1)
           GI:2970034 from [Arabidopsis thaliana]
          Length = 300

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +1

Query: 316 GPIYNXVRHHRLHHAHFATENDPFDYNQGFAYAHI 420
           G   + V  HR HH    ++ DP    +G  ++HI
Sbjct: 106 GDPMDWVSIHRFHHQFTDSDRDPHSPKEGLLFSHI 140


>At1g06100.1 68414.m00639 fatty acid desaturase family protein
           similar to delta 9 acyl-lipid desaturase (ADS1)
           GI:2970034 from [Arabidopsis thaliana]
          Length = 299

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +1

Query: 316 GPIYNXVRHHRLHHAHFATENDPFDYNQGFAYAHI 420
           G   + V  HR HH    ++ DP    +GF ++H+
Sbjct: 105 GDPLDWVSIHRFHHQFTDSDRDPHSPIEGFWFSHV 139


>At4g33690.1 68417.m04785 expressed protein 
          Length = 281

 Score = 27.1 bits (57), Expect = 5.8
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +1

Query: 25  RRKASGDSSRGNKSQ*QERSKLARCTFFHSHTSALSL 135
           +RK+  +SS G   Q   R  L RCT    + +  SL
Sbjct: 81  KRKSRDESSNGQSEQNNRRDFLKRCTSVDENVTTTSL 117


>At3g51190.1 68416.m05604 60S ribosomal protein L8 (RPL8B) ribosomal
           protein L8, cytosolic - Arabidopsis thaliana, PIR:T04582
          Length = 260

 Score = 27.1 bits (57), Expect = 5.8
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -3

Query: 175 RHPFNFIYQKVNSIKREQMYVNEKKYSG 92
           RHPF ++ QK   +  E MY  +  Y G
Sbjct: 65  RHPFRYMKQKELFVAAEGMYTGQYLYCG 92


>At3g18360.1 68416.m02335 VQ motif-containing protein contains
           PF05678: VQ motif
          Length = 285

 Score = 27.1 bits (57), Expect = 5.8
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +1

Query: 328 NXVRHHRLHHAHFATENDPFDYNQGFAY 411
           N   HH  HH H   + +P + N G  Y
Sbjct: 8   NHPYHHHPHHHHHHPKREPNENNSGILY 35


>At3g15850.1 68416.m02005 fatty acid desaturase family protein
           similar to delta 9 acyl-lipid desaturase (ADS1)
           GI:2970034 from [Arabidopsis thaliana]
          Length = 371

 Score = 27.1 bits (57), Expect = 5.8
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +1

Query: 298 QTLXGVGPIYNXVRHHRLHHAHFATENDPFDYNQGFAYAHI 420
           Q L G  PI + V  HR HH    ++ DP     GF ++H+
Sbjct: 172 QALQG-NPI-DWVSTHRYHHQFCDSDRDPHSPLDGFWFSHM 210


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,864,871
Number of Sequences: 28952
Number of extensions: 152229
Number of successful extensions: 426
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 425
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 722638680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)