Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0630
         (681 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g26140.1 68414.m03191 hypothetical protein                          30   1.2  
At5g13950.1 68418.m01631 expressed protein                             28   6.6  
At5g53090.1 68418.m06595 oxidoreductase, putative similar to for...    27   8.7  
At2g22660.1 68415.m02685 glycine-rich protein                          27   8.7  

>At1g26140.1 68414.m03191 hypothetical protein
          Length = 162

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = +2

Query: 32  QPTHQPALVFIHAGLYQEECLAIDSDVQLIGC 127
           +P   PA++F+H  + +E+C A  +D  ++ C
Sbjct: 30  RPLFLPAVIFVHIRVMEEDCGAFAADCVVLSC 61


>At5g13950.1 68418.m01631 expressed protein 
          Length = 939

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
 Frame = +1

Query: 199 SDSGLCR---THDAQVLT-GCNNTMQHHKHFCLEVSDNCSPTIDHCIIRS 336
           +DSG C    TH +QV +  C N + H      + S  CSP+  H   R+
Sbjct: 474 TDSGRCLLVGTHSSQVSSPDCGNNINHEDREEKQYSSPCSPSRCHSFNRT 523


>At5g53090.1 68418.m06595 oxidoreductase, putative similar to
           forever young oxidoreductase (FEY3) GI:12004621 from
           [Arabidopsis thaliana]
          Length = 364

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 14/39 (35%), Positives = 16/39 (41%)
 Frame = +1

Query: 196 GSDSGLCRTHDAQVLTGCNNTMQHHKHFCLEVSDNCSPT 312
           GS S L    DAQ+   C       K  C  +S NC  T
Sbjct: 278 GSRSTLFSATDAQIPEHCEKLKTEDKPVCTFISQNCKHT 316


>At2g22660.1 68415.m02685 glycine-rich protein 
          Length = 819

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/30 (40%), Positives = 13/30 (43%)
 Frame = +1

Query: 127 CDGQCSGVCST*A*SGIDADVCGGSDSGLC 216
           C   CSG C     S  +A  CG   SG C
Sbjct: 725 CGSSCSGECGDMVKSAANASGCGSGCSGEC 754


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,217,468
Number of Sequences: 28952
Number of extensions: 280080
Number of successful extensions: 743
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 743
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1438152744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)