Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0628
(577 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 1e-13
SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 61 6e-10
SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 50 2e-06
SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 4e-06
SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 7e-05
SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1) 36 0.031
SB_55921| Best HMM Match : Aldo_ket_red (HMM E-Value=0.16) 33 0.13
SB_6077| Best HMM Match : EGF (HMM E-Value=0) 29 2.1
SB_40691| Best HMM Match : Peptidase_C27 (HMM E-Value=1.1) 29 3.6
SB_46434| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 27 8.3
>SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 340
Score = 73.3 bits (172), Expect = 1e-13
Identities = 30/48 (62%), Positives = 39/48 (81%)
Frame = +1
Query: 283 VVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPI 426
VV+R+D+FIT+KLWNT+H +V DSLK LGLDY+DLYL+HWP+
Sbjct: 65 VVERKDLFITSKLWNTKHNPKDVRSNCVDSLKDLGLDYLDLYLIHWPL 112
Score = 53.2 bits (122), Expect = 1e-07
Identities = 27/63 (42%), Positives = 38/63 (60%)
Frame = +2
Query: 68 SLKMNNGRDMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETEQE 247
++K+NNG +MP +GLGT+ KSK Q+ + V AI GYRH D A Y E+E
Sbjct: 3 TVKLNNGLEMPVLGLGTW---------KSKPGQVENAVKFAIKEGYRHIDCAYAYRNEKE 53
Query: 248 IGE 256
+G+
Sbjct: 54 VGD 56
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 504 G*VKGIGLSNFNKQQLETV 560
G VK IGLSNFN +Q++ +
Sbjct: 150 GLVKAIGLSNFNSKQVDDI 168
>SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 407
Score = 61.3 bits (142), Expect = 6e-10
Identities = 27/57 (47%), Positives = 38/57 (66%)
Frame = +1
Query: 256 AVKMKVEEGVVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPI 426
A+ + EG VKRE++F+T+KLW H +V A +LK L LDY+DLYL+H P+
Sbjct: 97 ALSEVLTEGKVKREELFVTSKLWCDSHHPDDVLPACQATLKNLQLDYLDLYLIHIPV 153
Score = 38.3 bits (85), Expect = 0.004
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +2
Query: 149 KSKDKQLRDVVMRAIDVGYRHFDTASVYETEQEIGE 256
+S +++ + V AI++GYRH D A +Y E EIGE
Sbjct: 61 QSSKEEVGNAVRLAIELGYRHIDCAEIYGNEGEIGE 96
>SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 333
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/47 (42%), Positives = 32/47 (68%)
Frame = +1
Query: 286 VKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWPI 426
+ R +I++ TK++ T+H E A SL +LGL Y+DLYL+H+P+
Sbjct: 124 IPRCEIYVVTKVYFTEHGYKETMDAFYKSLTRLGLGYVDLYLIHFPV 170
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/60 (38%), Positives = 32/60 (53%)
Frame = +2
Query: 77 MNNGRDMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETEQEIGE 256
MN+GR +P +GLG + D + V+ A++ GYR DTAS Y EQ +GE
Sbjct: 70 MNDGRKIPLLGLGAH------------DIHSKQAVLWALESGYRLIDTASRYHNEQSVGE 117
>SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 48.4 bits (110), Expect = 4e-06
Identities = 20/51 (39%), Positives = 34/51 (66%)
Frame = +1
Query: 271 VEEGVVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHWP 423
V + +KREDI++TTKL ++ + + +S+KKL + Y+DL+L+H P
Sbjct: 77 VRKSGLKREDIYVTTKLKPSEEGHSNALKYAKESIKKLDIGYVDLFLIHTP 127
Score = 33.5 bits (73), Expect = 0.13
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2
Query: 173 DVVMRAIDVGYRHFDTASVYETEQEIG 253
DV + A+ GYR DTA +Y+ E+E+G
Sbjct: 48 DVCLFALKNGYRMLDTADIYQNEKEVG 74
>SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 44.4 bits (100), Expect = 7e-05
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Frame = +1
Query: 259 VKMKVEEGVVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDLYLMHW----PI 426
V + + + R+DIFI TKL +++ SL+ L DYIDL+L+H
Sbjct: 379 VAKAIADSGIPRKDIFIITKLHPRYLGYEPTLKSVEMSLRALSTDYIDLFLIHSKTCDDF 438
Query: 427 GLNADYSHSDVDFMETWRGLEDAQRMGKLKA 519
L + E+W+ +E+ R GK+++
Sbjct: 439 LLTCAEGEPRGTWKESWKAMEELHRQGKIRS 469
>SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1)
Length = 93
Score = 35.5 bits (78), Expect = 0.031
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +2
Query: 77 MNNGRDMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFDTASVYETEQEIGE 256
+++G +P GLG Y +K + V+ A++ GYR DTA+ Y E+ +GE
Sbjct: 3 LSDGYKIPRFGLGLY---------DLDEKHTKQAVLWALENGYRMIDTAASYNNEKRVGE 53
>SB_55921| Best HMM Match : Aldo_ket_red (HMM E-Value=0.16)
Length = 195
Score = 33.5 bits (73), Expect = 0.13
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +1
Query: 370 SLKKLGLDYIDLYLMHW 420
SL++LG+D IDLYL+HW
Sbjct: 51 SLERLGIDRIDLYLLHW 67
>SB_6077| Best HMM Match : EGF (HMM E-Value=0)
Length = 1165
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/57 (24%), Positives = 23/57 (40%)
Frame = +1
Query: 391 DYIDLYLMHWPIGLNADYSHSDVDFMETWRGLEDAQRMGKLKASDCLXXXXXXWRRC 561
D + YL HWP G +D+D T + + ++ + DC+ RC
Sbjct: 764 DLVTGYLCHWPAGFKGSNCETDIDECATNPCDNNGTCVDRVASYDCVCKPGFTGTRC 820
>SB_40691| Best HMM Match : Peptidase_C27 (HMM E-Value=1.1)
Length = 406
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = -2
Query: 99 GMSLPLFIFNEGTSIVDASPSPHRDST 19
G+ L + +F+ TSI+++ P+P+R+ T
Sbjct: 234 GVGLEIKVFSSCTSILNSKPNPYREKT 260
>SB_46434| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 873
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = -3
Query: 224 RRYRNDGIRHLWRALQHHGAACPWTSLRRSDQTQGTCPGRWRAC 93
R R GIR + + HG A PW R ++ P +W+ C
Sbjct: 678 RNPRRTGIRQMEKIFCLHGGAIPW----RRNKAINQRPQKWQRC 717
>SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 406
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/38 (28%), Positives = 15/38 (39%)
Frame = -3
Query: 206 GIRHLWRALQHHGAACPWTSLRRSDQTQGTCPGRWRAC 93
G+RH L+ C W RR CP ++C
Sbjct: 125 GLRHSQMKLRREPGTCFWCGDRRGPHPWKECPANGKSC 162
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,941,691
Number of Sequences: 59808
Number of extensions: 371332
Number of successful extensions: 1046
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1373676929
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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