Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0627
(556 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to te... 57 7e-09
At4g22670.1 68417.m03272 tetratricopeptide repeat (TPR)-containi... 54 6e-08
At2g42810.1 68415.m05300 serine/threonine protein phosphatase, p... 38 0.003
At1g12270.1 68414.m01419 stress-inducible protein, putative simi... 37 0.008
At1g62740.1 68414.m07081 stress-inducible protein, putative simi... 35 0.032
At4g12400.1 68417.m01960 stress-inducible protein, putative simi... 35 0.042
At1g78120.1 68414.m09104 tetratricopeptide repeat (TPR)-containi... 33 0.17
At4g08320.1 68417.m01373 tetratricopeptide repeat (TPR)-containi... 32 0.22
At5g09420.1 68418.m01091 chloroplast outer membrane translocon s... 31 0.39
At4g30480.2 68417.m04328 tetratricopeptide repeat (TPR)-containi... 29 2.8
At4g30480.1 68417.m04327 tetratricopeptide repeat (TPR)-containi... 29 2.8
At2g41520.1 68415.m05130 DNAJ heat shock N-terminal domain-conta... 29 2.8
At1g18020.1 68414.m02229 12-oxophytodienoate reductase, putative... 29 2.8
At1g17990.1 68414.m02226 12-oxophytodienoate reductase, putative... 29 2.8
At1g68185.1 68414.m07789 ubiquitin-related similar to ubiquitin-... 28 4.8
At5g12430.1 68418.m01461 DNAJ heat shock N-terminal domain-conta... 27 6.4
At3g19970.1 68416.m02527 expressed protein 27 6.4
At1g04190.1 68414.m00409 tetratricopeptide repeat (TPR)-containi... 27 6.4
At1g55610.1 68414.m06365 protein kinase family protein contains ... 27 8.4
>At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to
tetratricoredoxin [Arabidopsis thaliana] GI:18041544;
similar to SP|Q42443 Thioredoxin H-type (TRX-H) (Phloem
sap 13 kDa protein-1) {Oryza sativa}; contains Pfam
profile: PF00085 Thioredoxin
Length = 380
Score = 57.2 bits (132), Expect = 7e-09
Identities = 35/100 (35%), Positives = 46/100 (46%)
Frame = +3
Query: 255 LDMEGVIAPDQTDESQDMGDPNXXXXXXXXXXXXXXXXXAMRAFSEQKYDEAINLYTAAI 434
LD V+ PD + Q MGDP AM A S+ ++DEAI T A+
Sbjct: 81 LDNSDVVEPDN-EPPQPMGDPTAEVTDENRDDAQSEKSKAMEAISDGRFDEAIEHLTKAV 139
Query: 435 QFNPQSALLFAKRGTGVSKN*PTQ*CIKDCTHALELNCDS 554
NP SA+L+A R + K I+D AL+ N DS
Sbjct: 140 MLNPTSAILYATRASVFLKVKKPNAAIRDANVALQFNSDS 179
Score = 48.4 bits (110), Expect = 3e-06
Identities = 22/51 (43%), Positives = 31/51 (60%)
Frame = +1
Query: 16 NAEQLDQLKSFVEICKTQPQLLHHPQLAFFKDYLISLGVSLPTATFGAKDF 168
+A Q+ +L+ FVE K P +LH P L FFK+YL SLG +P +D+
Sbjct: 3 DAIQVAELRRFVEQLKLNPSILHDPSLVFFKEYLRSLGAQVPKIEKTERDY 53
>At4g22670.1 68417.m03272 tetratricopeptide repeat (TPR)-containing
protein similar to Hsc70-interacting protein (Hip) from
{Homo sapiens} SP|P50502, {Rattus norvegicus} SP|P50503;
contains Pfam profile PF00515: tetratricopeptide repeat
(TPR) domain
Length = 441
Score = 54.0 bits (124), Expect = 6e-08
Identities = 33/100 (33%), Positives = 44/100 (44%)
Frame = +3
Query: 255 LDMEGVIAPDQTDESQDMGDPNXXXXXXXXXXXXXXXXXAMRAFSEQKYDEAINLYTAAI 434
+++EG D Q MGD + AM A SE +DEAI T AI
Sbjct: 91 VELEGDTVEPDNDPPQKMGDSSVEVTDENREAAQEAKGKAMEALSEGNFDEAIEHLTRAI 150
Query: 435 QFNPQSALLFAKRGTGVSKN*PTQ*CIKDCTHALELNCDS 554
NP SA+++ R + K I+D ALE+N DS
Sbjct: 151 TLNPTSAIMYGNRASVYIKLKKPNAAIRDANAALEINPDS 190
Score = 51.2 bits (117), Expect = 5e-07
Identities = 21/43 (48%), Positives = 31/43 (72%)
Frame = +1
Query: 16 NAEQLDQLKSFVEICKTQPQLLHHPQLAFFKDYLISLGVSLPT 144
++ +L +LK F++ CK+ P LL P L+FF+DYL SLG +PT
Sbjct: 2 DSTKLSELKVFIDQCKSDPSLLTTPSLSFFRDYLESLGAKIPT 44
>At2g42810.1 68415.m05300 serine/threonine protein phosphatase,
putative similar to SP|P53042 Serine/threonine protein
phosphatase 5 (EC 3.1.3.16) (PP5) (Protein phosphatase
T) (PPT) {Rattus norvegicus}; contains Pfam profiles
PF00149: Ser/Thr protein phosphatase, PF00515: TPR
Domain
Length = 484
Score = 38.3 bits (85), Expect = 0.003
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +3
Query: 372 AMRAFSEQKYDEAINLYTAAIQFNPQSALLFAKRGTGVSKN*PTQ*CIKDCTHALELN 545
A AF KY AI+LYT AI+ N +A+ +A R +K I+D + A+E++
Sbjct: 20 ANEAFKGHKYSSAIDLYTKAIELNSNNAVYWANRAFAHTKLEEYGSAIQDASKAIEVD 77
>At1g12270.1 68414.m01419 stress-inducible protein, putative similar
to sti (stress inducible protein) [Glycine max]
GI:872116; contains Pfam profile PF00515 TPR Domain
Length = 572
Score = 37.1 bits (82), Expect = 0.008
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +3
Query: 384 FSEQKYDEAINLYTAAIQFNPQSALLFAKRGTGVSKN*PTQ*CIKDCTHALELN 545
F EQKY EAI YT AI+ NP ++ R +K +KD +EL+
Sbjct: 394 FKEQKYPEAIKHYTEAIKRNPNDHKAYSNRAASYTKLGAMPEGLKDAEKCIELD 447
Score = 27.1 bits (57), Expect = 8.4
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 381 AFSEQKYDEAINLYTAAIQFNPQSALLFAKR 473
AFS + AIN +T AI P + +LF+ R
Sbjct: 12 AFSSGDFTTAINHFTEAIALAPTNHVLFSNR 42
>At1g62740.1 68414.m07081 stress-inducible protein, putative similar
to sti (stress inducible protein) [Glycine max]
GI:872116; contains Pfam profile PF00515 TPR Domain
Length = 571
Score = 35.1 bits (77), Expect = 0.032
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +3
Query: 384 FSEQKYDEAINLYTAAIQFNPQSALLFAKRGTGVSKN*PTQ*CIKDCTHALELN 545
F EQKY +A+ YT AI+ NP+ ++ R +K +KD +EL+
Sbjct: 393 FKEQKYPDAVRHYTEAIKRNPKDPRAYSNRAACYTKLGAMPEGLKDAEKCIELD 446
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +3
Query: 381 AFSEQKYDEAINLYTAAIQFNPQSALLFAKRGTGVSKN*PTQ*CIKDCTHALELNCD 551
AFS ++ A+N +T AI P + +LF+ R + + D +EL D
Sbjct: 12 AFSSGDFNSAVNHFTDAINLTPTNHVLFSNRSAAHASLNHYDEALSDAKKTVELKPD 68
>At4g12400.1 68417.m01960 stress-inducible protein, putative similar
to sti (stress inducible protein) [Glycine max]
GI:872116; contains Pfam profile PF00515 TPR Domain
Length = 530
Score = 34.7 bits (76), Expect = 0.042
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +3
Query: 384 FSEQKYDEAINLYTAAIQFNPQSALLFAKRGTGVSKN*PTQ*CIKDCTHALELN 545
F EQKY EA+ Y+ AI+ NP ++ R +K +KD +EL+
Sbjct: 380 FKEQKYPEAVKHYSEAIKRNPNDVRAYSNRAACYTKLGALPEGLKDAEKCIELD 433
>At1g78120.1 68414.m09104 tetratricopeptide repeat (TPR)-containing
protein low similarity to SP|Q99615 DnaJ homolog
subfamily C member 7 (Tetratricopeptide repeat protein
2) {Homo sapiens}; contains Pfam profile PF00515: TPR
Domain
Length = 530
Score = 32.7 bits (71), Expect = 0.17
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +3
Query: 384 FSEQKYDEAINLYTAAIQFNPQSALLFAKRGTGVSKN*PTQ*CIKDCTHALEL 542
F+ K++ A +YT ++ +P +ALL R K + I+DCT AL L
Sbjct: 405 FNASKFEGASVVYTEGLENDPYNALLLCNRAASRFKLDLFEKAIEDCTLALSL 457
>At4g08320.1 68417.m01373 tetratricopeptide repeat (TPR)-containing
protein glutamine-rich tetratricopeptide repeat (TPR)
containing protein (SGT) - Rattus
norvegicus,PID:e1285298 (SP|O70593); contains Pfam
profile PF00515 TPR Domain
Length = 426
Score = 32.3 bits (70), Expect = 0.22
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 378 RAFSEQKYDEAINLYTAAIQFNPQSALLFAKRGTGVSKN*PTQ*CIKDCTHALELN 545
+A Y EA+ LY+ AI ++A+ + R ++ IKDC ++E++
Sbjct: 184 KAMQSNLYLEAVELYSFAIALTDKNAVFYCNRAAAYTQINMCSEAIKDCLKSIEID 239
>At5g09420.1 68418.m01091 chloroplast outer membrane translocon
subunit, putative similar to component of chloroplast
outer membrane translocon Toc64 [Pisum sativum]
GI:7453538; contains Pfam profiles PF01425: Amidase,
PF00515: TPR Domain
Length = 603
Score = 31.5 bits (68), Expect = 0.39
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +3
Query: 381 AFSEQKYDEAINLYTAAIQFNPQSALLFAKRGTGVSKN*PTQ*CIKDCTHAL 536
A+ +++++A+N YT AI+ N +A + R + Q +DCT A+
Sbjct: 498 AYKGKQWNKAVNFYTEAIKLNGANATYYCNRAAAFLELCCFQQAEQDCTKAM 549
>At4g30480.2 68417.m04328 tetratricopeptide repeat (TPR)-containing
protein similar to SP|Q99614 Tetratricopeptide repeat
protein 1 {Homo sapiens}; contains Pfam profile PF00515:
TPR Domain
Length = 277
Score = 28.7 bits (61), Expect = 2.8
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Frame = +3
Query: 378 RAFSEQKYDEAINLYTAA---IQFNPQS----ALLFAKRGTGVSKN*PTQ*CIKDCTHAL 536
+ F Y+EA++ Y A +Q P+S ++ + RG K + IK+CT AL
Sbjct: 114 KLFVNGLYEEALSKYAFALELVQELPESIELRSICYLNRGVCFLKLGKCEETIKECTKAL 173
Query: 537 ELN 545
ELN
Sbjct: 174 ELN 176
>At4g30480.1 68417.m04327 tetratricopeptide repeat (TPR)-containing
protein similar to SP|Q99614 Tetratricopeptide repeat
protein 1 {Homo sapiens}; contains Pfam profile PF00515:
TPR Domain
Length = 208
Score = 28.7 bits (61), Expect = 2.8
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Frame = +3
Query: 378 RAFSEQKYDEAINLYTAA---IQFNPQS----ALLFAKRGTGVSKN*PTQ*CIKDCTHAL 536
+ F Y+EA++ Y A +Q P+S ++ + RG K + IK+CT AL
Sbjct: 114 KLFVNGLYEEALSKYAFALELVQELPESIELRSICYLNRGVCFLKLGKCEETIKECTKAL 173
Query: 537 ELN 545
ELN
Sbjct: 174 ELN 176
>At2g41520.1 68415.m05130 DNAJ heat shock N-terminal domain-containing
protein contains Pfam profiles PF00226: DnaJ domain,
PF00515: TPR Domain
Length = 1108
Score = 28.7 bits (61), Expect = 2.8
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = +3
Query: 381 AFSEQKYDEAINLYTAAIQFN----PQSALLFAKRGTGVSKN*PTQ*CIKDCTHALELN 545
A ++KY EA+ YTAA+ N P +A+ F R I DC+ A+ L+
Sbjct: 842 AVRDRKYMEAVEQYTAALSRNVDSRPFAAICFCNRAAANQALVQIADAIADCSLAMALD 900
>At1g18020.1 68414.m02229 12-oxophytodienoate reductase, putative
similar to OPR1 [GI:3882355] and OPR2 [GI:3882356]
Length = 269
Score = 28.7 bits (61), Expect = 2.8
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 409 LLIYILQPYNLIHRVLCCLLNGGQVYPKTDQPN 507
L+ Y + P+NL HRV+ L + Y QPN
Sbjct: 10 LMPYKMGPFNLSHRVVLAPLTRSRSYGNIPQPN 42
>At1g17990.1 68414.m02226 12-oxophytodienoate reductase, putative
similar to OPR1 [GI:3882355] and OPR2 [GI:3882356]
Length = 269
Score = 28.7 bits (61), Expect = 2.8
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 409 LLIYILQPYNLIHRVLCCLLNGGQVYPKTDQPN 507
L+ Y + P+NL HRV+ L + Y QPN
Sbjct: 10 LMPYKMGPFNLSHRVVLAPLTRSRSYGNIPQPN 42
>At1g68185.1 68414.m07789 ubiquitin-related similar to
ubiquitin-like protein smt3/pmt3 SP:O13351 from [Fission
yeast]
Length = 215
Score = 27.9 bits (59), Expect = 4.8
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +3
Query: 375 MRAFSEQKYDEAINLYTAAIQFNPQS 452
+R F+++K++ I LYT + +PQ+
Sbjct: 156 LRVFADEKFERVIKLYTDKAKLDPQN 181
>At5g12430.1 68418.m01461 DNAJ heat shock N-terminal domain-containing
protein similarity to TETRATRICOPEPTIDE REPEAT PROTEIN 2
, human, SWISSPROT:TTC2_HUMAN; contains Pfam profiles
PF00226: DnaJ domain, PF00515: TPR Domain
Length = 1165
Score = 27.5 bits (58), Expect = 6.4
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = +3
Query: 381 AFSEQKYDEAINLYTAAIQFN----PQSALLFAKRGTGVSKN*PTQ*CIKDCTHALELN 545
AF ++ EA+ YTAA+ N P +A+ F R I DC+ A+ L+
Sbjct: 889 AFQSGRHTEAVEHYTAALACNVESRPFTAVCFCNRAAAYKALGQFSDAIADCSLAIALD 947
>At3g19970.1 68416.m02527 expressed protein
Length = 434
Score = 27.5 bits (58), Expect = 6.4
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -3
Query: 521 VFNT--SLGWSVFGYTCPPFSKQQSTLWIKLYGCSI 420
VF+T + GW +G F KQ S+L ++ GC +
Sbjct: 235 VFHTFSNTGWLTYGAILEKFQKQDSSLMGRVKGCIV 270
>At1g04190.1 68414.m00409 tetratricopeptide repeat (TPR)-containing
protein low similarity to protein antigen LmSTI1
[Leishmania major] GI:1698880; contains Pfam profile
PF00515 TPR Domain; EST gb|Z47802 and gb|Z48402 come
from this gene
Length = 328
Score = 27.5 bits (58), Expect = 6.4
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = +3
Query: 393 QKYDEAINLYTAAIQFNPQS 452
+KY++A+ + A+Q+NPQS
Sbjct: 97 EKYEDALAAFEMALQYNPQS 116
>At1g55610.1 68414.m06365 protein kinase family protein contains
Prosite:PS00107: Protein kinases ATP-binding region
signature
Length = 1166
Score = 27.1 bits (57), Expect = 8.4
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -1
Query: 499 GQFLDTPVPRLANNKALCGL 440
GQ PV R ANN LCG+
Sbjct: 731 GQLTTFPVSRYANNSGLCGV 750
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,021,043
Number of Sequences: 28952
Number of extensions: 189648
Number of successful extensions: 469
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 469
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1053014392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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