Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0621
(636 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 287 3e-78
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 284 4e-77
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 284 4e-77
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 284 4e-77
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 283 5e-77
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 281 2e-76
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 281 3e-76
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 281 4e-76
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 279 8e-76
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 128 3e-30
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 127 7e-30
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 127 7e-30
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 124 4e-29
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 124 4e-29
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 122 2e-28
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 122 2e-28
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 97 7e-21
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 97 9e-21
At5g22450.1 68418.m02618 expressed protein 31 0.85
At4g37190.1 68417.m05265 expressed protein 31 0.85
At3g19570.2 68416.m02482 expressed protein contains Pfam domain,... 31 0.85
At3g19570.1 68416.m02481 expressed protein contains Pfam domain,... 31 0.85
At3g57880.1 68416.m06452 C2 domain-containing protein contains I... 30 1.1
At1g51570.1 68414.m05804 C2 domain-containing protein contains I... 30 1.1
At1g32480.1 68414.m04008 isocitrate/isopropylmalate dehydrogenas... 30 1.1
At1g22610.1 68414.m02823 C2 domain-containing protein contains I... 30 1.1
At3g07470.1 68416.m00891 expressed protein contains Pfam profile... 28 4.5
At5g54570.1 68418.m06793 glycosyl hydrolase family 1 protein con... 28 6.0
At5g09530.1 68418.m01103 hydroxyproline-rich glycoprotein family... 28 6.0
At5g16730.1 68418.m01959 expressed protein weak similarity to mi... 27 7.9
At4g04980.1 68417.m00724 hydroxyproline-rich glycoprotein family... 27 7.9
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 27 7.9
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 27 7.9
At1g21850.1 68414.m02735 multi-copper oxidase type I family prot... 27 7.9
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 287 bits (705), Expect = 3e-78
Identities = 140/196 (71%), Positives = 153/196 (78%), Gaps = 1/196 (0%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGQV 226
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 227 RAPRHHRRLEPGTMDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDSVLDV 406
LEPGTMDS+RSG GQIFRPDNFVFGQSGAGNNWAKG YTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 407 VRKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTV 586
VRKEAE+CDC QG G KIREEYPDR+M T+SV PSPKVSDTV
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180
Query: 587 XEXYNATLSVHXLXEN 634
E YNATLSVH L EN
Sbjct: 181 VEPYNATLSVHQLVEN 196
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 284 bits (696), Expect = 4e-77
Identities = 140/195 (71%), Positives = 149/195 (76%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 229
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 230 APRHHRRLEPGTMDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDSVLDVV 409
LEPGTMDS+RSG GQ FRPDNFVFGQSGAGNNWAKG YTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 410 RKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTVX 589
RKEAE+CDC QG G KIREEYPDR+M T+SV PSPKVSDTV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 590 EXYNATLSVHXLXEN 634
E YNATLSVH L EN
Sbjct: 181 EPYNATLSVHQLVEN 195
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 284 bits (696), Expect = 4e-77
Identities = 140/195 (71%), Positives = 149/195 (76%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 229
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 230 APRHHRRLEPGTMDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDSVLDVV 409
LEPGTMDS+RSG GQ FRPDNFVFGQSGAGNNWAKG YTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 410 RKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTVX 589
RKEAE+CDC QG G KIREEYPDR+M T+SV PSPKVSDTV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 590 EXYNATLSVHXLXEN 634
E YNATLSVH L EN
Sbjct: 181 EPYNATLSVHQLVEN 195
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 284 bits (696), Expect = 4e-77
Identities = 138/195 (70%), Positives = 151/195 (77%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 229
MREI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 230 APRHHRRLEPGTMDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDSVLDVV 409
LEPGTMDSVR+G GQIFRPDNFVFGQSGAGNNWAKG YTEGAEL+D+VLDVV
Sbjct: 61 PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
Query: 410 RKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTVX 589
RKEAE+CDC QG G KIREEYPDR+M T+SV PSPKVSDTV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 590 EXYNATLSVHXLXEN 634
E YNATLSVH L EN
Sbjct: 181 EPYNATLSVHQLVEN 195
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 283 bits (695), Expect = 5e-77
Identities = 140/196 (71%), Positives = 151/196 (77%), Gaps = 1/196 (0%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGQV 226
MREI+HIQ GQCGNQIG+KFWE+I DEHGID TG Y GD+ DLQLERINVYYNEASGG+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 227 RAPRHHRRLEPGTMDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDSVLDV 406
LEPGTMDS+RSG GQIFRPDNFVFGQSGAGNNWAKG YTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 407 VRKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTV 586
VRKEAE+CDC QG G KIREEYPDR+M T+SV PSPKVSDTV
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180
Query: 587 XEXYNATLSVHXLXEN 634
E YNATLSVH L EN
Sbjct: 181 VEPYNATLSVHQLVEN 196
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 281 bits (690), Expect = 2e-76
Identities = 138/195 (70%), Positives = 149/195 (76%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 229
MREI+HIQ GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 230 APRHHRRLEPGTMDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDSVLDVV 409
LEPGTMDSVRSG GQIFRPDNFVFGQSGAGNNWAKG YTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 410 RKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTVX 589
RKEAE+CDC QG G KIREEYPDR+M T+SV PSPKVSDTV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 590 EXYNATLSVHXLXEN 634
E YNATLSVH L EN
Sbjct: 181 EPYNATLSVHQLVEN 195
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 281 bits (689), Expect = 3e-76
Identities = 139/195 (71%), Positives = 149/195 (76%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 229
MREI+HIQ GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGG+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 230 APRHHRRLEPGTMDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDSVLDVV 409
LEPGTMDS+RSG GQIFRPDNFVFGQSGAGNNWAKG YTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 410 RKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTVX 589
RKEAE+CDC QG G KIREEYPDR+M T+SV PSPKVSDTV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180
Query: 590 EXYNATLSVHXLXEN 634
E YNATLSVH L EN
Sbjct: 181 EPYNATLSVHQLVEN 195
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 281 bits (688), Expect = 4e-76
Identities = 138/195 (70%), Positives = 150/195 (76%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 229
MREI+HIQ GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 230 APRHHRRLEPGTMDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDSVLDVV 409
LEPGTMDSVRSG GQIFRPDNFVFGQSGAGNNWAKG YTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 410 RKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTVX 589
RKEAE+CDC QG G KIREEYPDR+M T+SV PSPKVSDTV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180
Query: 590 EXYNATLSVHXLXEN 634
E YNATLSVH L EN
Sbjct: 181 EPYNATLSVHQLVEN 195
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 279 bits (685), Expect = 8e-76
Identities = 139/195 (71%), Positives = 149/195 (76%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 229
MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGG+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 230 APRHHRRLEPGTMDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDSVLDVV 409
LEPGTMDS+RSG GQIFRPDNFVFGQSGAGNNWAKG YTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 410 RKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSDTVX 589
RKEAE+ DC QG G KIREEYPDR+M T+SV PSPKVSDTV
Sbjct: 121 RKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180
Query: 590 EXYNATLSVHXLXEN 634
E YNATLSVH L EN
Sbjct: 181 EPYNATLSVHQLVEN 195
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 128 bits (309), Expect = 3e-30
Identities = 72/198 (36%), Positives = 105/198 (53%), Gaps = 3/198 (1%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 223
MREI+ I GQ G Q+G WE+ EHGI P G DS + + N +++E S GQ
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 224 VRAPRH-HRRLEPGTMDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDSVL 400
PR LEP +D VR+GT Q+F P+ + G+ A NN+A+G YT G E+VD+ L
Sbjct: 61 -HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCL 119
Query: 401 DVVRKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSD 580
+ +RK A++C QG G ++ ++ + +++ PSP+VS
Sbjct: 120 ERLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVST 179
Query: 581 TVXEXYNATLSVHXLXEN 634
V E YN+ LS H L E+
Sbjct: 180 AVVEPYNSVLSTHSLLEH 197
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 127 bits (306), Expect = 7e-30
Identities = 72/198 (36%), Positives = 104/198 (52%), Gaps = 3/198 (1%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 223
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 224 VRAPRH-HRRLEPGTMDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDSVL 400
PR LEP +D VR+GT Q+F P+ + G+ A NN+A+G YT G E+VD L
Sbjct: 61 -HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCL 119
Query: 401 DVVRKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSD 580
D VRK A++C QG G ++ +Y + +++ PSP+VS
Sbjct: 120 DRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVST 179
Query: 581 TVXEXYNATLSVHXLXEN 634
V E YN+ LS H L E+
Sbjct: 180 AVVEPYNSVLSTHSLLEH 197
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 127 bits (306), Expect = 7e-30
Identities = 72/198 (36%), Positives = 104/198 (52%), Gaps = 3/198 (1%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 223
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 224 VRAPRH-HRRLEPGTMDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDSVL 400
PR LEP +D VR+GT Q+F P+ + G+ A NN+A+G YT G E+VD L
Sbjct: 61 -HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCL 119
Query: 401 DVVRKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSD 580
D VRK A++C QG G ++ +Y + +++ PSP+VS
Sbjct: 120 DRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVST 179
Query: 581 TVXEXYNATLSVHXLXEN 634
V E YN+ LS H L E+
Sbjct: 180 AVVEPYNSVLSTHSLLEH 197
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 124 bits (300), Expect = 4e-29
Identities = 72/198 (36%), Positives = 103/198 (52%), Gaps = 3/198 (1%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 223
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E G+
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 224 VRAPRH-HRRLEPGTMDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDSVL 400
PR LEP +D VR+GT Q+F P+ + G+ A NN+A+G YT G E+VD L
Sbjct: 61 -HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCL 119
Query: 401 DVVRKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSD 580
D +RK A++C QG G ++ +Y + ++V PSP+VS
Sbjct: 120 DRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVST 179
Query: 581 TVXEXYNATLSVHXLXEN 634
+V E YN+ LS H L E+
Sbjct: 180 SVVEPYNSVLSTHSLLEH 197
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 124 bits (300), Expect = 4e-29
Identities = 72/198 (36%), Positives = 103/198 (52%), Gaps = 3/198 (1%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 223
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E G+
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 224 VRAPRH-HRRLEPGTMDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDSVL 400
PR LEP +D VR+GT Q+F P+ + G+ A NN+A+G YT G E+VD L
Sbjct: 61 -HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCL 119
Query: 401 DVVRKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSD 580
D +RK A++C QG G ++ +Y + ++V PSP+VS
Sbjct: 120 DRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVST 179
Query: 581 TVXEXYNATLSVHXLXEN 634
+V E YN+ LS H L E+
Sbjct: 180 SVVEPYNSVLSTHSLLEH 197
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 122 bits (294), Expect = 2e-28
Identities = 71/198 (35%), Positives = 102/198 (51%), Gaps = 3/198 (1%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 223
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E G+
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 224 VRAPRH-HRRLEPGTMDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDSVL 400
PR LEP +D VR+GT Q+F P+ + G+ A NN+A+G YT G E+VD L
Sbjct: 61 -HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCL 119
Query: 401 DVVRKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSD 580
D +RK A++C QG G ++ +Y + ++V PSP+VS
Sbjct: 120 DRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVST 179
Query: 581 TVXEXYNATLSVHXLXEN 634
+V E YN+ LS H L E+
Sbjct: 180 SVVEPYNSVLSTHSLLEH 197
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 122 bits (294), Expect = 2e-28
Identities = 71/198 (35%), Positives = 102/198 (51%), Gaps = 3/198 (1%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 223
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E G+
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 224 VRAPRH-HRRLEPGTMDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDSVL 400
PR LEP +D VR+GT Q+F P+ + G+ A NN+A+G YT G E+VD L
Sbjct: 61 -HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCL 119
Query: 401 DVVRKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSPKVSD 580
D +RK A++C QG G ++ +Y + ++V PSP+VS
Sbjct: 120 DRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVST 179
Query: 581 TVXEXYNATLSVHXLXEN 634
+V E YN+ LS H L E+
Sbjct: 180 SVVEPYNSVLSTHSLLEH 197
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 97.5 bits (232), Expect = 7e-21
Identities = 60/198 (30%), Positives = 100/198 (50%), Gaps = 4/198 (2%)
Frame = +2
Query: 53 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVRA 232
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Q
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQAD-DQHYI 61
Query: 233 PRHHR-RLEPGTMDSVRSGTLGQIFRPDNFVFGQ--SGAGNNWAKGXYTEGAELVDSVLD 403
PR LEP ++ +++G ++ +N GAGNNWA G Y +G + + ++D
Sbjct: 62 PRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMD 120
Query: 404 VVRKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSP-KVSD 580
++ +EA+ D +G G + + Y +++ TYSV P+ + SD
Sbjct: 121 MIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSD 180
Query: 581 TVXEXYNATLSVHXLXEN 634
V + YN+ L++ L N
Sbjct: 181 VVVQPYNSLLTLKRLTLN 198
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 97.1 bits (231), Expect = 9e-21
Identities = 60/198 (30%), Positives = 100/198 (50%), Gaps = 4/198 (2%)
Frame = +2
Query: 53 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVRA 232
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Q
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQAD-DQHYI 61
Query: 233 PRHHR-RLEPGTMDSVRSGTLGQIFRPDNFVFGQ--SGAGNNWAKGXYTEGAELVDSVLD 403
PR LEP ++ +++G ++ +N GAGNNWA G Y +G + + ++D
Sbjct: 62 PRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMD 120
Query: 404 VVRKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVPSP-KVSD 580
++ +EA+ D +G G + + Y +++ TYSV P+ + SD
Sbjct: 121 MIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSD 180
Query: 581 TVXEXYNATLSVHXLXEN 634
V + YN+ L++ L N
Sbjct: 181 VVVQPYNSLLTLKRLTLN 198
>At5g22450.1 68418.m02618 expressed protein
Length = 1180
Score = 30.7 bits (66), Expect = 0.85
Identities = 24/121 (19%), Positives = 47/121 (38%)
Frame = +2
Query: 203 NEASGGQVRAPRHHRRLEPGTMDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAE 382
+E SG R + +SG+L R + G G W +G +
Sbjct: 474 SEDSGAGDNKTRERAFASGDLFTTPKSGSLLLPTRKNKIQTSHKGGGA-WKQGKSESVSS 532
Query: 383 LVDSVLDVVRKEAESCDCXQGLXSDTLARRRHRFRYGHPPHLKIREEYPDRIMNTYSVVP 562
L + ++E+ + + +A ++R +YG PP K+++ P + + + P
Sbjct: 533 LTTPGFHPIMVKSENLPVEKPFHNIKIASDKNRSKYGRPPAKKVKDRKPATRLASNANTP 592
Query: 563 S 565
S
Sbjct: 593 S 593
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 30.7 bits (66), Expect = 0.85
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGI 139
MREIV IQ G+ N +G+ FW + G+
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGL 30
>At3g19570.2 68416.m02482 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 644
Score = 30.7 bits (66), Expect = 0.85
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = -1
Query: 501 GGCPYRNRCRRRASVSEXNPWXQSHDSASFRTTSKTESTSSAPSVXCPLAQLLPAPDCPK 322
GG R R + +P SH + + TT+ + STSS+ SV ++ P+P +
Sbjct: 35 GGLQRRPRAAKNVPSRYLSP-SPSHSTTTTTTTATSTSTSSSSSVILRSSKRYPSPLLSR 93
Query: 321 TKLSGRKIC---PKVPERTESM 265
T S + +P+R++S+
Sbjct: 94 TTNSASNLVYTPSSLPKRSQSV 115
>At3g19570.1 68416.m02481 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 627
Score = 30.7 bits (66), Expect = 0.85
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = -1
Query: 501 GGCPYRNRCRRRASVSEXNPWXQSHDSASFRTTSKTESTSSAPSVXCPLAQLLPAPDCPK 322
GG R R + +P SH + + TT+ + STSS+ SV ++ P+P +
Sbjct: 35 GGLQRRPRAAKNVPSRYLSP-SPSHSTTTTTTTATSTSTSSSSSVILRSSKRYPSPLLSR 93
Query: 321 TKLSGRKIC---PKVPERTESM 265
T S + +P+R++S+
Sbjct: 94 TTNSASNLVYTPSSLPKRSQSV 115
>At3g57880.1 68416.m06452 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 773
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Frame = +2
Query: 476 HRFRYGHPPHLKIR-----EEYPDRIMNTYSVVPSPKVSDTVXEXYNATLSV 616
+R+R HPPH+ R +PD + + P+ + SD V Y+ S+
Sbjct: 633 YRWRPRHPPHMDTRLSHADSAHPDELDEEFDTFPTSRPSDIVRMRYDRLRSI 684
>At1g51570.1 68414.m05804 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 776
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Frame = +2
Query: 476 HRFRYGHPPHLKIR-----EEYPDRIMNTYSVVPSPKVSDTVXEXYNATLSV 616
+R+R HPPH+ R +PD + + P+ + SD V Y+ S+
Sbjct: 636 YRWRPRHPPHMDTRLSHADSAHPDELDEEFDTFPTSRPSDIVRMRYDRLRSI 687
>At1g32480.1 68414.m04008 isocitrate/isopropylmalate dehydrogenase
family protein similar to NAD+ dependent isocitrate
dehydrogenase subunit 2 [Arabidopsis thaliana]
GI:1766048; contains Pfam profile PF00180 dehydrogenase,
isocitrate/isopropylmalate family
Length = 294
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +2
Query: 191 NVYYNEASGGQVRAPRHHRRLEP--GTMDSVRSGTLGQIFRPDNFVFGQSGAGNN 349
N+ YNE + + RA R H + + ++ SG G F D +F Q G+ N
Sbjct: 181 NITYNEIASRETRAIRRHSNSKSLWAIIANIASGVAGGSFGDDYAIFEQVGSVGN 235
>At1g22610.1 68414.m02823 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 1029
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Frame = +2
Query: 476 HRFRYGHPPHLKIR-----EEYPDRIMNTYSVVPSPKVSDTVXEXYNATLSV 616
+R+R HPPH+ R +PD + + P+ + +D V Y+ SV
Sbjct: 889 YRYRPRHPPHMDARVSQADNAHPDELDEEFDTFPTSRPADIVRMRYDRLRSV 940
>At3g07470.1 68416.m00891 expressed protein contains Pfam profile
PF04398: Protein of unknown function, DUF538
Length = 169
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +2
Query: 134 GIDPTGAYHGDSDLQLERINVYYNEASGGQVRAPRHHRRLEPGTMDSVRSGTLGQIFRPD 313
GI P G D++ R +VY N+A + H+ GT+ S + L I +
Sbjct: 43 GIFPKGVREFTFDVETGRFSVYLNQACEAKYETEIHYDANITGTIGSAQISDLSGISAQE 102
Query: 314 NFVF 325
F++
Sbjct: 103 LFLW 106
>At5g54570.1 68418.m06793 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
similar to amygdalin hydrolase isoform AH I precursor
(GI:16757966) [Prunus serotina]
Length = 535
Score = 27.9 bits (59), Expect = 6.0
Identities = 21/73 (28%), Positives = 34/73 (46%)
Frame = +2
Query: 266 MDSVRSGTLGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELVDSVLDVVRKEAESCDCXQG 445
+D V S ++ + PD FVFG + + + +G EG + +S+ D KE
Sbjct: 22 LDHVSSESISRANFPDGFVFGTASSAYQF-EGAVKEGNK-GESIWDTFTKEKPG-KILDF 78
Query: 446 LXSDTLARRRHRF 484
+DT + HRF
Sbjct: 79 SNADTTVDQYHRF 91
>At5g09530.1 68418.m01103 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 370
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -1
Query: 375 PSVXCPLAQLLPAPDCPKTKLSGRKICPKVPERTESMVP 259
P P +P P+ PK + PKVPE T+ VP
Sbjct: 306 PKSEAPKFPEIPKPELPKIPEVPKPELPKVPEITKPAVP 344
>At5g16730.1 68418.m01959 expressed protein weak similarity to
microtubule binding protein D-CLIP-190 [Drosophila
melanogaster] GI:2773363, SMC2-like condensin
[Arabidopsis thaliana] GI:14279543
Length = 853
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -1
Query: 411 RTTSKTE-STSSAPSVXCPLAQLLPAPDCPKTKLSGRKICPKVPERTE 271
RT +K+E S +++PS P ++L P +K S + PK+P E
Sbjct: 32 RTVNKSETSNNNSPSTTTPHSRLSLDRSSPNSKSSVERRSPKLPTPPE 79
>At4g04980.1 68417.m00724 hydroxyproline-rich glycoprotein family
protein Common family members: At4g18570, At3g25690,
At5g61090 [Arabidopsis thaliana]
Length = 681
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 408 TTSKTESTSSAPSVXCPLAQLLPAPDCPKTKLS 310
TTS+T+ST S+P P L +P P +S
Sbjct: 281 TTSETDSTESSPKEDVPPPPPLTSPQTPSPTVS 313
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 56 EIVHIQAGQCGNQIGAKFWEIISD 127
+I++ A + G+ GA FWE+IS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +2
Query: 383 LVDSVLDVVRKEAESCDCXQ 442
+++SV VVRKEAE+C+C Q
Sbjct: 1 MINSV-GVVRKEAENCNCLQ 19
>At1g21850.1 68414.m02735 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 551
Score = 27.5 bits (58), Expect = 7.9
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = -3
Query: 232 GTYLXAGGFIVVYIDALQLQVRVPMVGTGGVDAVLVGDDLPELSSDLVAALTSLDMYDFP 53
G + AGGF + I + + ++ VP G VL+GD DL A L + FP
Sbjct: 132 GFHKAAGGFGAIRISS-RPRIPVPFPAPAGDYTVLIGDWYKTNHKDLRAQLDNGGKLPFP 190
Query: 52 HFVL 41
+L
Sbjct: 191 DGIL 194
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,083,456
Number of Sequences: 28952
Number of extensions: 233507
Number of successful extensions: 772
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 716
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1305036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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