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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0615
         (814 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g57490.1 68416.m06400 40S ribosomal protein S2 (RPS2D) 40S ri...   162   3e-40
At2g41840.1 68415.m05171 40S ribosomal protein S2 (RPS2C)             161   4e-40
At1g59359.1 68414.m06677 40S ribosomal protein S2 (RPS2B) simila...   161   7e-40
At1g58983.1 68414.m06666 40S ribosomal protein S2, putative simi...   161   7e-40
At1g58684.1 68414.m06657 40S ribosomal protein S2, putative           161   7e-40
At1g58380.1 68414.m06642 40S ribosomal protein S2 (RPS2A) simila...   161   7e-40
At2g33800.1 68415.m04147 ribosomal protein S5 family protein con...    47   1e-05
At1g72390.1 68414.m08373 expressed protein                             31   1.2  
At1g80480.1 68414.m09427 PRLI-interacting factor L, putative sim...    29   3.7  
At5g01770.1 68418.m00096 transducin family protein / WD-40 repea...    29   4.9  
At3g18530.1 68416.m02357 expressed protein similar to unknown pr...    29   4.9  
At3g01450.1 68416.m00069 expressed protein                             29   4.9  
At5g59520.1 68418.m07459 zinc transporter (ZIP2) identical to zi...    28   6.4  
At3g63100.1 68416.m07087 glycine-rich protein                          28   8.5  
At3g61940.1 68416.m06956 zinc transporter, putative similar to z...    28   8.5  
At2g04050.1 68415.m00386 MATE efflux family protein similar to r...    28   8.5  

>At3g57490.1 68416.m06400 40S ribosomal protein S2 (RPS2D) 40S
           ribosomal protein S2 - Arabidopsis thaliana,
           SWISSPROT:RS2_ARATH
          Length = 276

 Score =  162 bits (393), Expect = 3e-40
 Identities = 73/91 (80%), Positives = 84/91 (92%), Gaps = 1/91 (1%)
 Frame = +3

Query: 249 QRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 428
           + ++IID  +GPSL DEV+KIMPVQKQTRAGQRTRFKAF+ +GD+NGH+GLGVKCSKEVA
Sbjct: 74  KEYQIIDLLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFIVVGDSNGHVGLGVKCSKEVA 133

Query: 429 TAIRGAIILAKLSVLPVRRGYWGNKIGS-HT 518
           TAIRGAIILAKLSV+P+RRGYWGNKIG  HT
Sbjct: 134 TAIRGAIILAKLSVVPIRRGYWGNKIGKPHT 164



 Score =  118 bits (285), Expect = 4e-27
 Identities = 52/83 (62%), Positives = 63/83 (75%)
 Frame = +2

Query: 509 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 688
           KPHTVPCKVTGKCGSVTVR++PAPRG+GIV+A VPKK+LQ AG+ D +TS+RGST TLGN
Sbjct: 161 KPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGN 220

Query: 689 FXXXXXXXXXXXXXXLTPDLWRD 757
           F              LTP+ W++
Sbjct: 221 FVKATFDCLQKTYGFLTPEFWKE 243



 Score = 59.3 bits (137), Expect = 3e-09
 Identities = 24/35 (68%), Positives = 32/35 (91%)
 Frame = +1

Query: 151 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKD 255
           ++++WVPVTKLGRLV+EGKI K+E IYL SLP+K+
Sbjct: 41  EEEKWVPVTKLGRLVKEGKITKIEQIYLHSLPVKE 75


>At2g41840.1 68415.m05171 40S ribosomal protein S2 (RPS2C)
          Length = 285

 Score =  161 bits (392), Expect = 4e-40
 Identities = 74/91 (81%), Positives = 83/91 (91%), Gaps = 1/91 (1%)
 Frame = +3

Query: 249 QRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 428
           + ++IID  +GP+L DEV+KIMPVQKQTRAGQRTRFKAFV +GD NGH+GLGVKCSKEVA
Sbjct: 83  KEYQIIDMLIGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVA 142

Query: 429 TAIRGAIILAKLSVLPVRRGYWGNKIGS-HT 518
           TAIRGAIILAKLSV+PVRRGYWGNKIG  HT
Sbjct: 143 TAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 173



 Score =  118 bits (285), Expect = 4e-27
 Identities = 52/83 (62%), Positives = 63/83 (75%)
 Frame = +2

Query: 509 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 688
           KPHTVPCKVTGKCGSVTVR++PAPRG+GIV+A VPKK+LQ AG+ D +TS+RGST TLGN
Sbjct: 170 KPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGN 229

Query: 689 FXXXXXXXXXXXXXXLTPDLWRD 757
           F              LTP+ W++
Sbjct: 230 FVKATFDCLQKTYGFLTPEFWKE 252



 Score = 51.6 bits (118), Expect = 6e-07
 Identities = 21/35 (60%), Positives = 29/35 (82%)
 Frame = +1

Query: 151 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKD 255
           ++++WVPVTKLGRLV  G I ++E IYL SLP+K+
Sbjct: 50  EEEKWVPVTKLGRLVAAGHIKQIEQIYLHSLPVKE 84


>At1g59359.1 68414.m06677 40S ribosomal protein S2 (RPS2B) similar
           to ribosomal protein S2 GI:430711 from [Drosophila
           melanogaster]
          Length = 284

 Score =  161 bits (390), Expect = 7e-40
 Identities = 74/91 (81%), Positives = 83/91 (91%), Gaps = 1/91 (1%)
 Frame = +3

Query: 249 QRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 428
           + ++IID  +GP+L DEV+KIMPVQKQTRAGQRTRFKAFV +GD NGH+GLGVKCSKEVA
Sbjct: 82  KEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVA 141

Query: 429 TAIRGAIILAKLSVLPVRRGYWGNKIGS-HT 518
           TAIRGAIILAKLSV+PVRRGYWGNKIG  HT
Sbjct: 142 TAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 172



 Score =  118 bits (285), Expect = 4e-27
 Identities = 52/83 (62%), Positives = 63/83 (75%)
 Frame = +2

Query: 509 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 688
           KPHTVPCKVTGKCGSVTVR++PAPRG+GIV+A VPKK+LQ AG+ D +TS+RGST TLGN
Sbjct: 169 KPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGN 228

Query: 689 FXXXXXXXXXXXXXXLTPDLWRD 757
           F              LTP+ W++
Sbjct: 229 FVKATFDCLQKTYGFLTPEFWKE 251



 Score = 54.4 bits (125), Expect = 9e-08
 Identities = 23/35 (65%), Positives = 29/35 (82%)
 Frame = +1

Query: 151 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKD 255
           ++ +WVPVTKLGRLV + KI KLE IYL SLP+K+
Sbjct: 49  EETKWVPVTKLGRLVADNKITKLEQIYLHSLPVKE 83


>At1g58983.1 68414.m06666 40S ribosomal protein S2, putative similar
           to ribosomal protein S2 GI:939717 from [Urechis caupo]
          Length = 284

 Score =  161 bits (390), Expect = 7e-40
 Identities = 74/91 (81%), Positives = 83/91 (91%), Gaps = 1/91 (1%)
 Frame = +3

Query: 249 QRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 428
           + ++IID  +GP+L DEV+KIMPVQKQTRAGQRTRFKAFV +GD NGH+GLGVKCSKEVA
Sbjct: 82  KEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVA 141

Query: 429 TAIRGAIILAKLSVLPVRRGYWGNKIGS-HT 518
           TAIRGAIILAKLSV+PVRRGYWGNKIG  HT
Sbjct: 142 TAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 172



 Score =  118 bits (285), Expect = 4e-27
 Identities = 52/83 (62%), Positives = 63/83 (75%)
 Frame = +2

Query: 509 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 688
           KPHTVPCKVTGKCGSVTVR++PAPRG+GIV+A VPKK+LQ AG+ D +TS+RGST TLGN
Sbjct: 169 KPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGN 228

Query: 689 FXXXXXXXXXXXXXXLTPDLWRD 757
           F              LTP+ W++
Sbjct: 229 FVKATFDCLQKTYGFLTPEFWKE 251



 Score = 54.4 bits (125), Expect = 9e-08
 Identities = 23/35 (65%), Positives = 29/35 (82%)
 Frame = +1

Query: 151 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKD 255
           ++ +WVPVTKLGRLV + KI KLE IYL SLP+K+
Sbjct: 49  EETKWVPVTKLGRLVADNKITKLEQIYLHSLPVKE 83


>At1g58684.1 68414.m06657 40S ribosomal protein S2, putative 
          Length = 284

 Score =  161 bits (390), Expect = 7e-40
 Identities = 74/91 (81%), Positives = 83/91 (91%), Gaps = 1/91 (1%)
 Frame = +3

Query: 249 QRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 428
           + ++IID  +GP+L DEV+KIMPVQKQTRAGQRTRFKAFV +GD NGH+GLGVKCSKEVA
Sbjct: 82  KEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVA 141

Query: 429 TAIRGAIILAKLSVLPVRRGYWGNKIGS-HT 518
           TAIRGAIILAKLSV+PVRRGYWGNKIG  HT
Sbjct: 142 TAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 172



 Score =  118 bits (285), Expect = 4e-27
 Identities = 52/83 (62%), Positives = 63/83 (75%)
 Frame = +2

Query: 509 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 688
           KPHTVPCKVTGKCGSVTVR++PAPRG+GIV+A VPKK+LQ AG+ D +TS+RGST TLGN
Sbjct: 169 KPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGN 228

Query: 689 FXXXXXXXXXXXXXXLTPDLWRD 757
           F              LTP+ W++
Sbjct: 229 FVKATFDCLQKTYGFLTPEFWKE 251



 Score = 54.4 bits (125), Expect = 9e-08
 Identities = 23/35 (65%), Positives = 29/35 (82%)
 Frame = +1

Query: 151 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKD 255
           ++ +WVPVTKLGRLV + KI KLE IYL SLP+K+
Sbjct: 49  EETKWVPVTKLGRLVADNKITKLEQIYLHSLPVKE 83


>At1g58380.1 68414.m06642 40S ribosomal protein S2 (RPS2A) similar
           to ribosomal protein S2 GI:939717 from (Urechis caupo)
          Length = 284

 Score =  161 bits (390), Expect = 7e-40
 Identities = 74/91 (81%), Positives = 83/91 (91%), Gaps = 1/91 (1%)
 Frame = +3

Query: 249 QRFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 428
           + ++IID  +GP+L DEV+KIMPVQKQTRAGQRTRFKAFV +GD NGH+GLGVKCSKEVA
Sbjct: 82  KEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVA 141

Query: 429 TAIRGAIILAKLSVLPVRRGYWGNKIGS-HT 518
           TAIRGAIILAKLSV+PVRRGYWGNKIG  HT
Sbjct: 142 TAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 172



 Score =  118 bits (285), Expect = 4e-27
 Identities = 52/83 (62%), Positives = 63/83 (75%)
 Frame = +2

Query: 509 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 688
           KPHTVPCKVTGKCGSVTVR++PAPRG+GIV+A VPKK+LQ AG+ D +TS+RGST TLGN
Sbjct: 169 KPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGN 228

Query: 689 FXXXXXXXXXXXXXXLTPDLWRD 757
           F              LTP+ W++
Sbjct: 229 FVKATFDCLQKTYGFLTPEFWKE 251



 Score = 54.4 bits (125), Expect = 9e-08
 Identities = 23/35 (65%), Positives = 29/35 (82%)
 Frame = +1

Query: 151 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKD 255
           ++ +WVPVTKLGRLV + KI KLE IYL SLP+K+
Sbjct: 49  EETKWVPVTKLGRLVADNKITKLEQIYLHSLPVKE 83


>At2g33800.1 68415.m04147 ribosomal protein S5 family protein
           contains Pfam profiles PF03719: Ribosomal protein S5,
           C-terminal domain, PF00333: Ribosomal protein S5,
           N-terminal domain
          Length = 303

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 19/62 (30%), Positives = 40/62 (64%)
 Frame = +3

Query: 294 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 473
           + V+++  V K  + G++ +F+A V +GD  G++G+G   +KEV  A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208

Query: 474 PV 479
            V
Sbjct: 209 QV 210



 Score = 40.7 bits (91), Expect = 0.001
 Identities = 21/60 (35%), Positives = 31/60 (51%)
 Frame = +2

Query: 509 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 688
           K  T P +  G  G+  V L PA  GTG+++    + +L+MAGV++      GS   L N
Sbjct: 214 KYSTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNN 273


>At1g72390.1 68414.m08373 expressed protein
          Length = 1088

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = -3

Query: 728  HMSWQWQRMWL*QNFPRCQLNHELTCSNPVHQPSEE-AS*ELAQTQYQYHEGQESA 564
            +M+ Q Q+  L Q   + QL H+     P+ QPS++ A     Q Q Q HE  + A
Sbjct: 920  YMNQQQQQQQLQQQPQQQQLQHQQQLQQPMSQPSQQLAQSPQQQQQLQQHEQPQQA 975


>At1g80480.1 68414.m09427 PRLI-interacting factor L, putative
           similar to PRLI-interacting factor L [Arabidopsis
           thaliana] GI:11139268; contains Pfam profile PF02492:
           Cobalamin synthesis protein/P47K
          Length = 444

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -1

Query: 136 HDHGRDHDRVHEDRHGLYLH 77
           HDH  DHD  H D H  + H
Sbjct: 320 HDHNHDHDHHHHDGHDHHHH 339


>At5g01770.1 68418.m00096 transducin family protein / WD-40 repeat
           family protein similar to WD-repeat protein mip1
           (SP:P87141) [Schizosaccharomyces pombe]
          Length = 1354

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -2

Query: 543 LPVTLQGTVCGFLSCYPSNLF 481
           LP+ LQG + GF+   PSN++
Sbjct: 429 LPIVLQGAITGFILPLPSNIY 449


>At3g18530.1 68416.m02357 expressed protein similar to unknown
           protein GB:AAF24615 from [Arabidopsis thaliana]
          Length = 297

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 22/72 (30%), Positives = 32/72 (44%)
 Frame = -1

Query: 502 LLPQ*PLRTGRTDSLARIIAPRMAVATSLLHFTPKPI*PLLSPMATNALKRVRCPARVCF 323
           LL Q  L++ +        A R  VA +  H +P  + P L P   N   R+R  A  CF
Sbjct: 166 LLTQLLLKSSQDKRFVCEAAERALVAMTT-HVSPALLLPKLRPCLKNKSPRIRAKASACF 224

Query: 322 CTGMILRTSSFR 287
            +G + R  + R
Sbjct: 225 -SGCVPRLEAAR 235


>At3g01450.1 68416.m00069 expressed protein
          Length = 326

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 19/63 (30%), Positives = 28/63 (44%)
 Frame = -1

Query: 511 LPILLPQ*PLRTGRTDSLARIIAPRMAVATSLLHFTPKPI*PLLSPMATNALKRVRCPAR 332
           L +LL Q  L++ +        A +  VA +  H +P  + P L P   N   R+R  A 
Sbjct: 163 LDLLLTQLLLKSSQDKRFVCEAAEKALVAMTA-HVSPALLLPKLQPFLKNRNPRIRAKAS 221

Query: 331 VCF 323
            CF
Sbjct: 222 TCF 224


>At5g59520.1 68418.m07459 zinc transporter (ZIP2) identical to zinc
           transporter ZIP2 [Arabidopsis thaliana]
           gi|3252868|gb|AAC24198; member of the Zinc (Zn2+)-Iron
           (Fe2+) permease (ZIP) family, PMID:11500563
          Length = 353

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +3

Query: 360 AFVAIGDNNGHIGLGVKCSKE 422
           AFVA G NN H+G  V  S+E
Sbjct: 149 AFVAAGSNNNHVGASVGESRE 169


>At3g63100.1 68416.m07087 glycine-rich protein 
          Length = 199

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
 Frame = -1

Query: 130 HGRDH----DRVHEDRHGLYLHRVIRIRRENRHVH 38
           HGRDH    DR H   HG + HR  R  R   H H
Sbjct: 109 HGRDHRHGRDRGHHRGHGHHHHRGHRRGRGRGHGH 143


>At3g61940.1 68416.m06956 zinc transporter, putative similar to zinc
           transporter ZAT [Arabidopsis thaliana]
           gi|4206640|gb|AAD11757; similar to zinc transporter
           ZnT-2 [Rattus norvegicus] gi|1256378|gb|AAB02775; member
           of the cation diffusion facilitator (CDF) family, or
           cation efflux (CE) family, PMID:11500563
          Length = 334

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = -1

Query: 136 HDHGRDHDRVHEDRHG-LYLHRVIRIRRENRHVHRL 32
           HDHG  HD  H   HG  Y  R  ++  +++ +  +
Sbjct: 158 HDHGHGHDHGHSHDHGHSYGERAEQLLEKSKEIRNI 193


>At2g04050.1 68415.m00386 MATE efflux family protein similar to
           ripening regulated protein DDTFR18 [Lycopersicon
           esculentum] GI:12231296; contains Pfam profile: PF01554
           uncharacterized membrane protein family
          Length = 476

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = +2

Query: 515 HTVPCKVTGKCGSVTVRL 568
           H VPCK T K G VTV L
Sbjct: 11  HLVPCKDTWKSGQVTVEL 28


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,975,548
Number of Sequences: 28952
Number of extensions: 407245
Number of successful extensions: 1125
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1121
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1853336000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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