Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0614
         (697 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_28550| Best HMM Match : Fer2_2 (HMM E-Value=2.49992e-42)            60   2e-09
SB_68| Best HMM Match : No HMM Matches (HMM E-Value=.)                 51   8e-07
SB_21837| Best HMM Match : No HMM Matches (HMM E-Value=.)              49   3e-06
SB_9853| Best HMM Match : Lipase_3 (HMM E-Value=0.00075)               31   1.2  
SB_35740| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.2  
SB_7007| Best HMM Match : No HMM Matches (HMM E-Value=.)               30   1.6  
SB_57588| Best HMM Match : Vicilin_N (HMM E-Value=1.4)                 30   2.1  
SB_22018| Best HMM Match : VKOR (HMM E-Value=5.9)                      29   3.6  
SB_51733| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.8  
SB_43004| Best HMM Match : FAD_binding_4 (HMM E-Value=1.4e-18)         28   6.3  
SB_20037| Best HMM Match : 7tm_1 (HMM E-Value=3.09687e-43)             28   6.3  
SB_29135| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.3  

>SB_28550| Best HMM Match : Fer2_2 (HMM E-Value=2.49992e-42)
          Length = 1644

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 24/52 (46%), Positives = 40/52 (76%)
 Frame = +1

Query: 355 LREHVDLVAHVPVRNIGTLGGNLALKNKHNEFPSDIFLLLETIGATVGIIKT 510
           + EH+ +VA+ PVRN+G++ GN+ L + H++FPSDI  ++E IGA+V + K+
Sbjct: 492 IAEHLKVVANTPVRNVGSIAGNMMLAHDHSDFPSDIMTIMEGIGASVIVGKS 543



 Score = 41.5 bits (93), Expect = 6e-04
 Identities = 13/50 (26%), Positives = 30/50 (60%)
 Frame = +2

Query: 83  RWYKAFTVQDIFXILRREGSNNYRLVAGNTGQGVYPIKTEPKIYIDISSI 232
           +WY   ++  ++ +L    +N  ++V GNTG+G+Y       ++ID++++
Sbjct: 354 KWYAPHSLAQLYALLEEHSNNKVKMVGGNTGKGIYKKDGPFDVFIDVNNV 403



 Score = 37.9 bits (84), Expect = 0.008
 Identities = 16/27 (59%), Positives = 21/27 (77%)
 Frame = +3

Query: 588 LPPLSANNLLRTYKIMPRAQNAHAIVN 668
           +P L +  ++RTYKI PR+QNAHA VN
Sbjct: 666 IPMLPSEFVVRTYKITPRSQNAHAYVN 692


>SB_68| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 433

 Score = 51.2 bits (117), Expect = 8e-07
 Identities = 26/60 (43%), Positives = 38/60 (63%)
 Frame = +1

Query: 322 STNEEYKYLLQLREHVDLVAHVPVRNIGTLGGNLALKNKHNEFPSDIFLLLETIGATVGI 501
           ++++ Y     +R +   VA+VPVRN+ T+GGNL L + H  F SD+  + ETIGA V I
Sbjct: 68  ASSDVYYLEYNVRFNKTNVANVPVRNVATVGGNLMLTHDHPYFLSDLMTIFETIGARVVI 127



 Score = 40.3 bits (90), Expect = 0.001
 Identities = 19/53 (35%), Positives = 25/53 (47%)
 Frame = +2

Query: 86  WYKAFTVQDIFXILRREGSNNYRLVAGNTGQGVYPIKTEPKIYIDISSIDRLK 244
           WY   T++D++ +         R V GNTG G+Y       IYI I  I  LK
Sbjct: 10  WYSPTTLKDLYTLAAMNKDKRIRFVGGNTGLGIYKDDGPYDIYICIDQIPELK 62


>SB_21837| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 218

 Score = 49.2 bits (112), Expect = 3e-06
 Identities = 17/54 (31%), Positives = 36/54 (66%)
 Frame = +2

Query: 83  RWYKAFTVQDIFXILRREGSNNYRLVAGNTGQGVYPIKTEPKIYIDISSIDRLK 244
           +WY A ++ +++ +L    ++N R++AGNTG+G++  +    +YIDI+ +  L+
Sbjct: 48  KWYAAHSLAELYALLDHHSNDNVRMMAGNTGKGIFKDEGPVSVYIDINDVPELQ 101



 Score = 36.7 bits (81), Expect = 0.018
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +1

Query: 391 VRNIGTLGGNLALKNKHNEFPSDIFLLLETIGATV 495
           ++ + T+ GNL L + H+ FPSD+  ++  IG  V
Sbjct: 147 IKTLSTIAGNLMLAHDHSNFPSDLVTIMSAIGGLV 181


>SB_9853| Best HMM Match : Lipase_3 (HMM E-Value=0.00075)
          Length = 593

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -1

Query: 616 KRLFADKGGSLTSPMRLFLRSIFRNCDMLTSEIFISFLL 500
           ++LF DK G   S +R  + S+F    ++ S IF+ F L
Sbjct: 30  EKLFEDKSGRAWSILRFIVESLFTASHLILSVIFLFFFL 68


>SB_35740| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1069

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
 Frame = +1

Query: 244 GRALDENLNLGAGLSLTET---MDVFERWSTNEEYKYLLQLREHVDLVAHVPVRNIG 405
           GR L E L L   + LTE    ++  E W T  E K LL   +HV   A   + ++G
Sbjct: 425 GRPLSEVLQLTEAIQLTEVGQPLEQNEGWITTPELKDLLDSGDHVMAAAREVLYSVG 481


>SB_7007| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 608

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
 Frame = -3

Query: 569 IIFEIHFQELRHAHIRNLHIVFIIPTVAP--IVSSSKKISEGNSLCLFFKAKFPPRVPIF 396
           ++F  H+  + H  +R L    +   V P   + S KK++E     L    +F  RV  F
Sbjct: 525 VLFSEHYNIMEH-FLRYLRASLLSAEVMPPRFLPSLKKLAEDKGFVLRDPTRFENRVAPF 583

Query: 395 RTGTCATKSTCSR 357
           R G      +C+R
Sbjct: 584 RWGASCRLLSCTR 596


>SB_57588| Best HMM Match : Vicilin_N (HMM E-Value=1.4)
          Length = 756

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = -3

Query: 389 GTCATKSTCSRSCSKYLYSSFVDHLSKTSMVSVKLRPAPRFKFS 258
           GT  T+  C ++CS    SS   H  K+S   +K +  P F F+
Sbjct: 308 GTGCTQGCCCKNCSNKSNSSDDIHHEKSSKTELKNQDLPLFNFN 351


>SB_22018| Best HMM Match : VKOR (HMM E-Value=5.9)
          Length = 433

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +1

Query: 208 DLHRHIVDRPTEGRALDE 261
           DLH HI++   +GRALDE
Sbjct: 241 DLHNHIINSEQKGRALDE 258


>SB_51733| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 72

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -3

Query: 386 TCATKSTCSRSCSKYLYSSFVDH 318
           TC   S C++ CSK+L  S VDH
Sbjct: 48  TCCPNSYCAKKCSKFL--SLVDH 68


>SB_43004| Best HMM Match : FAD_binding_4 (HMM E-Value=1.4e-18)
          Length = 1067

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +2

Query: 107 QDIFXILRREGSNNYRLVAGNTGQGVYPIKTEPKIYIDISSIDRL 241
           + +  I R    +NY + A  TG  +  I +E  I ID++S+D++
Sbjct: 374 EQLSAICRFASRHNYTVQAKGTGSSMSRICSECDILIDMTSLDKI 418


>SB_20037| Best HMM Match : 7tm_1 (HMM E-Value=3.09687e-43)
          Length = 453

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -1

Query: 622 VLKRLFADKGGSLTSPMRLFLRS 554
           +++ LF DKG   + P+RLF R+
Sbjct: 309 IIRELFCDKGNVFSRPLRLFSRA 331


>SB_29135| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 359

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 521 NLHIVFIIPTVAPIVSSSKKISEGNSL 441
           N+ I  IIPTVA + S S  I+ G +L
Sbjct: 293 NMSIALIIPTVATVASFSVHIATGQNL 319


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,633,726
Number of Sequences: 59808
Number of extensions: 445114
Number of successful extensions: 1243
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1243
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1817559367
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)