Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0613
         (774 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   3.6  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    22   4.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.7  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   6.3  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   6.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   6.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   6.3  

>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 606 DKQRTPRATHDNR 644
           D+ RTPR  HD R
Sbjct: 210 DESRTPRPKHDGR 222


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/30 (33%), Positives = 16/30 (53%), Gaps = 7/30 (23%)
 Frame = +2

Query: 371 TGHIARNCPEGGR-------ESATQTCYNC 439
           +G +  NCP GG+       E+A + C +C
Sbjct: 19  SGCLITNCPRGGKRSKFAISENAVKPCVSC 48


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -3

Query: 202  ESRDTTPPCVHSRAKCPVRLH 140
            E R+  PP VHS    P   H
Sbjct: 1790 EEREEAPPSVHSSTVVPPPQH 1810


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 366 TRRATSHGTVPR 401
           TRRA+S G +PR
Sbjct: 268 TRRASSRGIIPR 279


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 4/33 (12%)
 Frame = +2

Query: 392 CPEG-GRESATQTC---YNCNKSGHISRNCPDG 478
           CPE  G  +  + C   Y CN      + CPDG
Sbjct: 39  CPEKYGFFADAEQCDKYYECNDGQITEKLCPDG 71


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +1

Query: 349 VMLQLQQDGP 378
           VMLQ+ QDGP
Sbjct: 964 VMLQISQDGP 973


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +1

Query: 349 VMLQLQQDGP 378
           VMLQ+ QDGP
Sbjct: 964 VMLQISQDGP 973


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,834
Number of Sequences: 336
Number of extensions: 3736
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)