Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0600
(891 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.) 94 2e-19
SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 3e-17
SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0) 79 4e-15
SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0) 79 4e-15
SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 1e-14
SB_54678| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 2e-14
SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35) 77 2e-14
SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 1e-08
SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 7e-08
SB_58139| Best HMM Match : Tetraspannin (HMM E-Value=0.2) 55 9e-08
SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38) 52 6e-07
SB_23414| Best HMM Match : Tetraspannin (HMM E-Value=3.8e-08) 52 8e-07
SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35) 52 8e-07
SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43) 49 6e-06
SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0) 46 3e-05
SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06) 46 3e-05
SB_36515| Best HMM Match : UPF0126 (HMM E-Value=0.73) 46 5e-05
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 44 2e-04
SB_32096| Best HMM Match : Tetraspannin (HMM E-Value=1.1e-13) 40 0.004
SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09) 38 0.008
SB_58401| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.019
SB_23555| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.058
SB_10599| Best HMM Match : Tetraspannin (HMM E-Value=1.8e-10) 32 0.72
SB_3201| Best HMM Match : C2 (HMM E-Value=0.0019) 30 2.2
SB_14751| Best HMM Match : DUF1602 (HMM E-Value=1.9) 30 2.2
SB_690| Best HMM Match : GCS (HMM E-Value=0) 29 3.8
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 29 5.1
SB_57705| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.7
SB_15243| Best HMM Match : DSHCT (HMM E-Value=0.81) 29 6.7
SB_40114| Best HMM Match : Cu-oxidase_3 (HMM E-Value=0) 29 6.7
SB_15528| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
>SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 93.9 bits (223), Expect = 2e-19
Identities = 52/124 (41%), Positives = 67/124 (54%)
Frame = +3
Query: 519 MIDWIQEEWLQCCGVEGPKDWDRNAYFNCSSGAAGAREACGVPFSCCRNKPQDIIRNKQC 698
+ID +Q E LQCCGV+G DWD N YFNCS ARE CGVP+SCCR +D+ N+QC
Sbjct: 187 IIDTVQTE-LQCCGVQGLNDWDANIYFNCS---GPARERCGVPYSCCR---KDLQENRQC 239
Query: 699 GYDVRKSPDTLEIAKIIYDKGSSKQPRSGSNTTCXXXXXXXYVSLLHKSWGICFAQNLRA 878
GY R P + I+ +G K + NT L+ + IC AQ L+A
Sbjct: 240 GYGARSVPTSQAKENGIFTEGCVKTGIAWINTNLYLIGGIGVGILILQLATICLAQTLKA 299
Query: 879 DIFA 890
+ A
Sbjct: 300 QVNA 303
Score = 63.3 bits (147), Expect = 3e-10
Identities = 29/88 (32%), Positives = 48/88 (54%)
Frame = +1
Query: 238 QQLVPPTNIALDPAFILICVGTITFIIGFTGCVGALRENTCLLACYAVFLALLLLAEMTT 417
+++ ++ PA I + +G + F+I GC+GALREN CLL Y ++L +
Sbjct: 91 EEITKLADLNFQPAVIFLALGGLLFVITIFGCIGALRENRCLLTAYIWMCGIILAGMIVC 150
Query: 418 GILFFVFKDWIKQQATTGFQTFIVHYRE 501
G L F +KD ++ + T + IV YR+
Sbjct: 151 GGLGFYYKDVLETKVTAQLKDAIVLYRD 178
Score = 47.2 bits (107), Expect = 2e-05
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +2
Query: 92 PGVRKYRRDTSEVSCCLKYVIFGVNVLFWLVGLIVLAVGVWSWTE-KDTFNNLSRL 256
P R+ + S C+KY +F +NV+FWL G ++LAVG++ + E K+ L+ L
Sbjct: 44 PNRRRRPGQPDDPSLCVKYSLFTINVIFWLAGAVILAVGIFIFIEMKEEITKLADL 99
>SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 86.2 bits (204), Expect = 3e-17
Identities = 44/84 (52%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Frame = +3
Query: 513 QNMIDWIQEEWLQCCGVEGPKDWDRNAYFNCSSGAAGAREACGVPFSCCRNKPQDIIRNK 692
QN+ID +Q+E+ +CCG +G DWD+N YFNCSS + EACGVP+SCC +D I N+
Sbjct: 126 QNLIDGVQQEF-KCCGAKGINDWDKNIYFNCSSPGS---EACGVPYSCC---IKDTI-NR 177
Query: 693 QCGYDVRKS-PDTLEIAKIIYDKG 761
QCGY +RKS T + +KII+ G
Sbjct: 178 QCGYGIRKSGTPTSDQSKIIFIGG 201
Score = 85.0 bits (201), Expect = 7e-17
Identities = 37/83 (44%), Positives = 55/83 (66%)
Frame = +1
Query: 256 TNIALDPAFILICVGTITFIIGFTGCVGALRENTCLLACYAVFLALLLLAEMTTGILFFV 435
++I DPAF LI VG I FI+GF+GC+GALREN CLL ++V LA++ ++ G+ FV
Sbjct: 40 SDILTDPAFALIIVGGIMFILGFSGCIGALRENICLLKFFSVVLAIIFFLQLALGVFVFV 99
Query: 436 FKDWIKQQATTGFQTFIVHYRED 504
F+D ++ QT + YR++
Sbjct: 100 FQDKVEAVIVEKLQTAVTKYRDN 122
>SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 280
Score = 79.4 bits (187), Expect = 4e-15
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Frame = +3
Query: 504 PRQQNMIDWIQEEWLQCCGVEGPKDWDRNAYFNCSSGAAGAREACGVPFSCCRNKPQDII 683
P Q++ID++Q L+CCGVE KDW N YFNCSS R +CGVPFSCC+ + I
Sbjct: 153 PLNQDLIDFMQT-LLKCCGVESYKDWQANPYFNCSS---PGRMSCGVPFSCCK---ESIQ 205
Query: 684 RNKQCGYDVRK-SPDTLEIAKIIYDKG 761
N+QCGYD K D + +Y G
Sbjct: 206 FNRQCGYDAGKLKTDAERLENGVYSGG 232
Score = 60.9 bits (141), Expect = 1e-09
Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Frame = +1
Query: 274 PAFILICVGTITFIIGFTGCVGALRENTCLLACY--AVFLALLLLAEMTTGILFFVFKDW 447
P I +G + F IGF GCVGALRENTC L Y +VFL L+LL + G + + KD
Sbjct: 77 PVVIFFVIGILMFFIGFFGCVGALRENTCFLTVYGTSVFLCLILL--IACGAVAYTQKDK 134
Query: 448 IKQQATTGFQTFIVHYREDPVNK 516
+ Q + + Y +DP+N+
Sbjct: 135 V-QALKERLKQDLKKYLDDPLNQ 156
Score = 39.9 bits (89), Expect = 0.003
Identities = 22/78 (28%), Positives = 44/78 (56%)
Frame = +2
Query: 131 SCCLKYVIFGVNVLFWLVGLIVLAVGVWSWTEKDTFNNLSRLQT*L*IQHSYSYVLAQ*H 310
S C KY +F +NV+F+++GL+V+ VGV + K+ +L +Q L ++ ++ + +
Sbjct: 25 SLCTKYTLFFINVIFFILGLLVMTVGV--YMVKELKKDLKGVQDWLKLESTFHWPVVI-- 80
Query: 311 S*LASLGVLVHFVKILVC 364
+G+L+ F+ C
Sbjct: 81 --FFVIGILMFFIGFFGC 96
>SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 299
Score = 79.4 bits (187), Expect = 4e-15
Identities = 48/125 (38%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Frame = +3
Query: 513 QNMIDWIQEEWLQCCGVEGPKDWDRNAYFNCSSGAAGAREACGVPFSCCRNKPQDIIRNK 692
Q +ID +Q L+CCG+ DW N YFNCSS + E+CGVPFSCC+ + I N+
Sbjct: 159 QFLIDRLQTN-LKCCGINSYNDWQTNVYFNCSSPGS---ESCGVPFSCCK---ESIQLNR 211
Query: 693 QCGYDV-RKSPDTLEIAKIIYDKGSSKQPRSGSNTTCXXXXXXXYVSLLHKSWGICFAQN 869
QCGYD R D + K +Y KG K S L+ G C A +
Sbjct: 212 QCGYDAGRMKTDAERLEKGVYSKGCWKTAISFIMDNLYLVIGITAAVLILIIVGSCMAFS 271
Query: 870 LRADI 884
RA I
Sbjct: 272 FRAQI 276
Score = 56.8 bits (131), Expect = 2e-08
Identities = 27/81 (33%), Positives = 46/81 (56%)
Frame = +1
Query: 259 NIALDPAFILICVGTITFIIGFTGCVGALRENTCLLACYAVFLALLLLAEMTTGILFFVF 438
+I +P+ +++ VG + F+I GC+GALRENT LLA Y + L L+ ++ G ++
Sbjct: 76 SILYEPSVVILIVGILLFLIATVGCIGALRENTILLAIYGGAVTLCLILLVSAGTAVYIH 135
Query: 439 KDWIKQQATTGFQTFIVHYRE 501
+D + + Q HYR+
Sbjct: 136 RDKVVAKLKDDLQ----HYRD 152
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/38 (44%), Positives = 29/38 (76%), Gaps = 1/38 (2%)
Frame = +2
Query: 131 SCCLKYVIFGVNVLFWLVGLIVLAVGVWSWTE-KDTFN 241
S C+KY++F VNV+FW+ G+++L +G + TE K+ +N
Sbjct: 36 STCIKYILFFVNVVFWVFGVLILVIGSYLMTEFKNAWN 73
>SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 296
Score = 77.8 bits (183), Expect = 1e-14
Identities = 40/84 (47%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +3
Query: 513 QNMIDWIQEEWLQCCGVEGPKDWDRNAYFNCSSGAAGAREACGVPFSCCRNKPQDIIRNK 692
Q +ID +Q L+CCGV DW N YFNCSS + E+CGVPFSCC+ + I N+
Sbjct: 159 QFLIDRLQTN-LKCCGVNSYTDWQTNIYFNCSSPGS---ESCGVPFSCCK---ESIQLNR 211
Query: 693 QCGYDV-RKSPDTLEIAKIIYDKG 761
QCGYD R D + K +Y KG
Sbjct: 212 QCGYDAGRMKTDAERLEKGVYSKG 235
Score = 56.8 bits (131), Expect = 2e-08
Identities = 27/81 (33%), Positives = 49/81 (60%)
Frame = +1
Query: 259 NIALDPAFILICVGTITFIIGFTGCVGALRENTCLLACYAVFLALLLLAEMTTGILFFVF 438
+I +P+ +++ VG + F+I GC+GALRENT LLA Y + L L+ ++ GI ++
Sbjct: 76 SILYEPSVVILIVGILLFLIATVGCIGALRENTILLAIYGGAVTLCLIFLVSAGIAVYMH 135
Query: 439 KDWIKQQATTGFQTFIVHYRE 501
+D + ++ + + HYR+
Sbjct: 136 QDKVVEK----LKDDLKHYRD 152
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/38 (44%), Positives = 29/38 (76%), Gaps = 1/38 (2%)
Frame = +2
Query: 131 SCCLKYVIFGVNVLFWLVGLIVLAVGVWSWTE-KDTFN 241
S C+KY++F VNV+FW+ G+++L +G + TE K+ +N
Sbjct: 36 STCIKYILFFVNVVFWVFGVLILVIGSYLMTEFKNAWN 73
>SB_54678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 77.0 bits (181), Expect = 2e-14
Identities = 42/83 (50%), Positives = 50/83 (60%)
Frame = +3
Query: 513 QNMIDWIQEEWLQCCGVEGPKDWDRNAYFNCSSGAAGAREACGVPFSCCRNKPQDIIRNK 692
QN ID IQ L+CCG DW+ N YFNCS A A EACGVP SCC +D I N
Sbjct: 67 QNAIDGIQSN-LKCCGGYSYHDWNHNKYFNCS---AQAVEACGVPHSCC---VEDQI-NT 118
Query: 693 QCGYDVRKSPDTLEIAKIIYDKG 761
QCG+ VR+ LE + +IY +G
Sbjct: 119 QCGFGVRREKSVLEASSVIYVRG 141
Score = 37.1 bits (82), Expect = 0.019
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 373 YAVFLALLLLAEMTTGILFFVFKDWIKQQATTGFQTFIVHYRED 504
Y V LA+L E+ G L F F + + + ++ + F+VHY++D
Sbjct: 20 YMVVLAVLFTLEIIAGFLSFFFVEETRSKVSSAIKLFVVHYQDD 63
>SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35)
Length = 286
Score = 77.0 bits (181), Expect = 2e-14
Identities = 39/85 (45%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Frame = +3
Query: 510 QQNMIDWIQEEWLQCCGVEGPKDWDRNAYFNCSSGAAGAREACGVPFSCCRNKPQDIIRN 689
+Q ID+IQ + +CCG+E KDW N YF+CSS ACGVPFSCC+ Q N
Sbjct: 150 KQEFIDFIQTRF-KCCGIESYKDWQANRYFSCSSPVP---TACGVPFSCCKKSIQG---N 202
Query: 690 KQCGYDVRK-SPDTLEIAKIIYDKG 761
+QCGYD K D + +Y KG
Sbjct: 203 RQCGYDAGKLKTDADRLENGVYSKG 227
Score = 47.6 bits (108), Expect = 1e-05
Identities = 21/54 (38%), Positives = 33/54 (61%)
Frame = +1
Query: 283 ILICVGTITFIIGFTGCVGALRENTCLLACYAVFLALLLLAEMTTGILFFVFKD 444
+L G ++I F GCVGAL+ENT LA Y +F+ L+ + G+L F+ ++
Sbjct: 75 LLFFTGFSLYLIVFFGCVGALKENTLFLASYGIFIFCCLIPIIAAGVLAFLQRE 128
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/40 (27%), Positives = 24/40 (60%)
Frame = +2
Query: 131 SCCLKYVIFGVNVLFWLVGLIVLAVGVWSWTEKDTFNNLS 250
S C+KY + VN +F ++G++++ G++ + N L+
Sbjct: 21 STCIKYTLLFVNAIFCVLGILLMFDGIYIFLRLKFENELT 60
>SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 341
Score = 57.6 bits (133), Expect = 1e-08
Identities = 30/83 (36%), Positives = 44/83 (53%)
Frame = +1
Query: 247 VPPTNIALDPAFILICVGTITFIIGFTGCVGALRENTCLLACYAVFLALLLLAEMTTGIL 426
+ N A P ++I VG I ++ F GC GA +EN C+L C+ FL LLL+ E+ G L
Sbjct: 45 IASVNYATGPR-VVIAVGFIIALVAFLGCCGAWKENKCMLICFFAFLLLLLILEIVGGAL 103
Query: 427 FFVFKDWIKQQATTGFQTFIVHY 495
+ KD I+ + I +Y
Sbjct: 104 AYNNKDKIENRLDKDILKAIENY 126
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +2
Query: 140 LKYVIFGVNVLFWLVGLIVLAVGVWSWTE 226
+K ++ N +F+L GLI+ VG+W+ T+
Sbjct: 10 VKILVIIFNFIFFLFGLILFGVGIWASTK 38
Score = 28.7 bits (61), Expect = 6.7
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = +3
Query: 513 QNMIDWIQEEWLQCCGVEGPKDWDRNAYFNCSSGAAGAREACGVPFSCCRNKPQDIIRNK 692
+N +D +Q+ ++CCG+ +DW SS G + VP SCC +D
Sbjct: 239 RNAVDDMQKT-VKCCGITTYEDWK-------SSDNLGLTD--NVPDSCCTTVEKD----- 283
Query: 693 QCGYDVRKSP 722
CG RK+P
Sbjct: 284 -CGMGQRKTP 292
>SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 55.2 bits (127), Expect = 7e-08
Identities = 25/75 (33%), Positives = 43/75 (57%)
Frame = +1
Query: 277 AFILICVGTITFIIGFTGCVGALRENTCLLACYAVFLALLLLAEMTTGILFFVFKDWIKQ 456
+ I+I VG ++ F GC GA++E+ CLLA + L ++L E+T L +V+++ +++
Sbjct: 326 SIIIIAVGAFIALVSFFGCCGAIKEHRCLLATFFALLFIILAVEITGTALGYVYRNKVEE 385
Query: 457 QATTGFQTFIVHYRE 501
Q IV Y E
Sbjct: 386 QLGKDMNDTIVSYGE 400
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 549 QCCGVEGPKDWDRNAYFNCSSGAAGAREACGVPFSCCR 662
+CCG+ G KDW R+ Y + VP SCC+
Sbjct: 418 KCCGINGFKDWQRSYYTKGNHSI--------VPDSCCK 447
>SB_58139| Best HMM Match : Tetraspannin (HMM E-Value=0.2)
Length = 108
Score = 54.8 bits (126), Expect = 9e-08
Identities = 25/52 (48%), Positives = 30/52 (57%)
Frame = +3
Query: 513 QNMIDWIQEEWLQCCGVEGPKDWDRNAYFNCSSGAAGAREACGVPFSCCRNK 668
QN+ID IQE + +CCG DWD N YF C + E CGVP +CC K
Sbjct: 58 QNIIDGIQENF-KCCGSSSINDWDANRYFKCGGPSP---EECGVPHTCCVKK 105
>SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38)
Length = 919
Score = 52.0 bits (119), Expect = 6e-07
Identities = 26/112 (23%), Positives = 51/112 (45%)
Frame = +1
Query: 142 KICNFWCKCFVLVSGLNSPRCGCVVLDRKRHLQQLVPPTNIALDPAFILICVGTITFIIG 321
K + + +L SG+ G V+ + L+ N P ++I G + I+
Sbjct: 16 KTFHMFFNTILLFSGIAILAVGIWVITSRSQYNSLLSNDNYVTVPG-LMIAAGCLVIIVC 74
Query: 322 FTGCVGALRENTCLLACYAVFLALLLLAEMTTGILFFVFKDWIKQQATTGFQ 477
GCV ++EN +L Y + L L+ + E+ TG++ +++ I + G +
Sbjct: 75 VVGCVAVIKENRFILVSYLIMLVLIFILEIATGVVAVIYRSEISYELEVGIR 126
>SB_23414| Best HMM Match : Tetraspannin (HMM E-Value=3.8e-08)
Length = 357
Score = 51.6 bits (118), Expect = 8e-07
Identities = 28/80 (35%), Positives = 40/80 (50%)
Frame = +3
Query: 522 IDWIQEEWLQCCGVEGPKDWDRNAYFNCSSGAAGAREACGVPFSCCRNKPQDIIRNKQCG 701
+D IQ+ L+CCG + DW+ N Y++C S C VP SCC+ I +C
Sbjct: 181 LDSIQKN-LKCCGFKDYNDWELNPYYSCKS---NGYSRCSVPASCCKLD----ISGSRCT 232
Query: 702 YDVRKSPDTLEIAKIIYDKG 761
VR + T EI + I+ G
Sbjct: 233 LGVRDATKTSEIGQFIHKNG 252
>SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35)
Length = 642
Score = 51.6 bits (118), Expect = 8e-07
Identities = 24/61 (39%), Positives = 36/61 (59%)
Frame = +1
Query: 283 ILICVGTITFIIGFTGCVGALRENTCLLACYAVFLALLLLAEMTTGILFFVFKDWIKQQA 462
+LI VG I II F GC GA +EN C+L + + L ++L E+ +L ++ KD I+
Sbjct: 409 LLIAVGCIITIIAFFGCCGAWKENKCMLILFFILLLIVLGLEIAAAVLGYINKDKIQSDL 468
Query: 463 T 465
T
Sbjct: 469 T 469
Score = 32.3 bits (70), Expect = 0.54
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 522 IDWIQEEWLQCCGVEGPKDWDRNAYFNCSSGAAGAREACGVP 647
ID +Q ++ +CCG +GP DW ++ AG CG P
Sbjct: 487 IDAMQMDF-ECCGAKGPSDW---TFYGQMKYKAGPGSCCGKP 524
>SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43)
Length = 211
Score = 48.8 bits (111), Expect = 6e-06
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = +1
Query: 283 ILICVGTITFIIGFTGCVGALRENTCLLACYAVFLALLLLAEMTTGILFFVFK 441
++I VG I I+ F GC+GA +EN C+L + V L +LL E+ +L + ++
Sbjct: 58 LVIAVGVIIAIVSFFGCLGAWKENRCMLGTFFVLLLILLTLEIAAAVLAYNYR 110
Score = 31.5 bits (68), Expect = 0.95
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 140 LKYVIFGVNVLFWLVGLIVLAVGVWSWTEKDTFNNLS 250
LK ++ NVLF++ G+ ++AVG W+ + F +S
Sbjct: 12 LKILVVFFNVLFFIFGIALIAVGAWAEVQYGEFIEVS 48
>SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 252
Score = 46.4 bits (105), Expect = 3e-05
Identities = 18/58 (31%), Positives = 35/58 (60%)
Frame = +1
Query: 283 ILICVGTITFIIGFTGCVGALRENTCLLACYAVFLALLLLAEMTTGILFFVFKDWIKQ 456
+ I +G +T I+ F C GAL+E+ C+L Y + + E+T +L +V+++ I++
Sbjct: 61 LCIVIGIVTVIVAFLACCGALKESQCMLGTYFGLVTAIFCLEVTAIVLAYVYRERIEK 118
Score = 38.7 bits (86), Expect = 0.006
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +2
Query: 137 CLKYVIFGVNVLFWLVGLIVLAVGVWSWTEKD 232
C+K+++F N+LF L G + A+GVW + KD
Sbjct: 9 CIKFMVFFFNLLFLLAGCAIFAIGVWIISSKD 40
>SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06)
Length = 187
Score = 46.4 bits (105), Expect = 3e-05
Identities = 34/100 (34%), Positives = 46/100 (46%), Gaps = 25/100 (25%)
Frame = +1
Query: 277 AFILICVGTITFIIGFTGCVGALRENTCLLAC-------------------------YAV 381
A+ILI +G + IIGF GC GAL+E+TCLL + V
Sbjct: 75 AYILIGIGFLIAIIGFIGCCGALKEHTCLLKTVSIKSILYGYMYAKKISLTIRIYLQFGV 134
Query: 382 FLALLLLAEMTTGILFFVFKDWIKQQATTGFQTFIVHYRE 501
L LL L E+ T I ++F+ IK + G T + Y E
Sbjct: 135 ILGLLFLVELGTAITGYIFRSEIKTGLSDGLDTALKDYPE 174
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +2
Query: 164 NVLFWLVGLIVLAVGVWSWTEKDTFNNLS 250
+++F L+GL VLAVG+W+ + + LS
Sbjct: 39 HLVFQLMGLSVLAVGIWARIQFSDYMKLS 67
>SB_36515| Best HMM Match : UPF0126 (HMM E-Value=0.73)
Length = 150
Score = 45.6 bits (103), Expect = 5e-05
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +1
Query: 259 NIALDPAFILICVGTITFIIGFTGCVGALREN 354
N+A DPA +L G + F+I F+GC+GALREN
Sbjct: 13 NLATDPAVMLAIAGVLMFVISFSGCLGALREN 44
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 44.0 bits (99), Expect = 2e-04
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +1
Query: 277 AFILICVGTITFIIGFTGCVGALRENTCLL 366
A+ILI +G + IIGF GC GAL+E+TCLL
Sbjct: 217 AYILIGIGFLIAIIGFIGCCGALKEHTCLL 246
>SB_32096| Best HMM Match : Tetraspannin (HMM E-Value=1.1e-13)
Length = 174
Score = 39.5 bits (88), Expect = 0.004
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +3
Query: 519 MIDWIQEEWLQCCGVE-GPKDWDRNAYFNCSSGAAGAREACGVPFSCCRNKPQDIIRNKQ 695
++D IQE LQCCG + GP DW N +F ++ VP SCC+ + R K
Sbjct: 86 VVDSIQER-LQCCGADSGPNDWMNNKHF---------LQSASVPDSCCKQE----YREKD 131
Query: 696 CG 701
CG
Sbjct: 132 CG 133
>SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09)
Length = 669
Score = 38.3 bits (85), Expect = 0.008
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 277 AFILICVGTITFIIGFTGCVGALRENTCLL 366
A I+I G + IGF GC GA++EN C L
Sbjct: 199 ANIMIAAGALVMFIGFVGCCGAVKENKCFL 228
Score = 31.9 bits (69), Expect = 0.72
Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +3
Query: 549 QCCGV-EGPKDWDRNAYFNCSSGAAGAREACGVPFSCCRNKPQD 677
+CCG +GPKDW A+ ++ C + C P D
Sbjct: 545 KCCGATQGPKDWANTAWAKSNTNQTVPESCCKKKAAGCNGAPAD 588
>SB_58401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 37.1 bits (82), Expect = 0.019
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 274 PAFILICVGTITFIIGFTGCVGALRENTCLLA 369
PA+ +I G +GF GC GA++E+ C+LA
Sbjct: 313 PAWTMIGAGAFVTFVGFFGCCGAVKESRCMLA 344
>SB_23555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 140
Score = 35.5 bits (78), Expect = 0.058
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1
Query: 283 ILICVGTITFIIGFTGCVGALRENTCLLA 369
I+I G + +I F GC GA++E+ CLLA
Sbjct: 28 IVIAAGALIALISFFGCCGAIKESRCLLA 56
>SB_10599| Best HMM Match : Tetraspannin (HMM E-Value=1.8e-10)
Length = 691
Score = 31.9 bits (69), Expect = 0.72
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 373 YAVFLALLLLAEMTTGILFFVFKDWIKQQATTGFQTFIVHYREDPVNK 516
+AV LAL+ + E+ G L + +K ++ TG + + HY + K
Sbjct: 406 FAVLLALIFVLEIAAGALAYAYKGKLEGYVRTGLKNGVDHYDKKEYKK 453
>SB_3201| Best HMM Match : C2 (HMM E-Value=0.0019)
Length = 278
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = -1
Query: 885 RCPLVG--SEQSIYPRICAKAIHTAEVATINRLCSNHSSAASR 763
RCP+VG S +++ P C + + N++ S SSAASR
Sbjct: 219 RCPIVGVHSIKTLTPFKCQTPVELEQAIPANKVSSRTSSAASR 261
>SB_14751| Best HMM Match : DUF1602 (HMM E-Value=1.9)
Length = 334
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/54 (24%), Positives = 28/54 (51%)
Frame = -2
Query: 467 VVACCFIQSLKTKNRIPVVISASSRSAKNTA*QANKQVFSRSAPTHPVKPIMNV 306
+ +++SL+ + P +S S A + + VF ++AP++P KP+ +
Sbjct: 192 ITTSLYLESLQASSHTPTSLSLESLLASSHTPTSLSLVFLQAAPSNPYKPLPRI 245
>SB_690| Best HMM Match : GCS (HMM E-Value=0)
Length = 560
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 234 VSFSVQDHTPTARTIKPTNQNKTFTPKITY 145
++ SV D TP R +KP +N+ PK Y
Sbjct: 395 IAGSVDDRTPEERGLKPLKENRFVIPKSRY 424
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 464 RLDFKRSSSTIEKTPSTKHDRLDPRRMAPVLRRRGSQG 577
+ FK+ SS+ E++P T+ P +P LR R S G
Sbjct: 404 KFSFKKRSSSKERSPKTESAPATPITSSPELRERPSWG 441
>SB_57705| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 673
Score = 28.7 bits (61), Expect = 6.7
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -1
Query: 576 PWDPRRRNTGAILLGSNRSCFVDGVFSIVDDERLKSSRGLL 454
PWD TGA LL S +SC D FS + KS + L+
Sbjct: 423 PWDSNLEKTGAKLL-SMKSCTDDDSFSNSNSNSDKSEQSLV 462
>SB_15243| Best HMM Match : DSHCT (HMM E-Value=0.81)
Length = 122
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 760 VPRSSRGVVRTQPVDCSDFGCMYRFCTNPGVYALL 864
+PRS++ V P +C D YRFC+ ALL
Sbjct: 70 IPRSTKDTVLPHPPNCED-QAGYRFCSKSVFVALL 103
>SB_40114| Best HMM Match : Cu-oxidase_3 (HMM E-Value=0)
Length = 220
Score = 28.7 bits (61), Expect = 6.7
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -3
Query: 652 LKGTPHASLAPAAPLEQLKYAFLSQSLGPSTPQHWSHS 539
+ G P+ S P P + +Y F+++ G HW HS
Sbjct: 169 MDGVPYLSQCPILPRQSFQYRFVAEPAG----THWYHS 202
>SB_15528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 75
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 464 RLDFKRSSSTIEKTPSTKHDR 526
+LDFKR SS + KTPS D+
Sbjct: 48 KLDFKRRSSCLPKTPSLLDDK 68
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,468,277
Number of Sequences: 59808
Number of extensions: 681609
Number of successful extensions: 1899
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1880
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2550281014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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