Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0873
(722 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10820| Best HMM Match : Sulfotransfer_1 (HMM E-Value=0) 56 2e-08
SB_27699| Best HMM Match : Sulfotransfer_1 (HMM E-Value=0.51) 55 7e-08
SB_39059| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_12928| Best HMM Match : Sulfotransfer_1 (HMM E-Value=9.3e-10) 44 2e-04
SB_46599| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41
SB_9654| Best HMM Match : Nop10p (HMM E-Value=2) 32 0.54
SB_28368| Best HMM Match : Pentaxin (HMM E-Value=9.5e-11) 31 0.72
SB_51627| Best HMM Match : Sulfotransfer_1 (HMM E-Value=0.017) 30 2.2
SB_14842| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_22840| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 29 5.0
SB_20575| Best HMM Match : TPR_1 (HMM E-Value=0) 29 5.0
SB_28477| Best HMM Match : 7tm_1 (HMM E-Value=4.6e-20) 28 6.7
SB_38055| Best HMM Match : zf-CW (HMM E-Value=1.9) 28 8.8
SB_31213| Best HMM Match : SNF2_N (HMM E-Value=0) 28 8.8
>SB_10820| Best HMM Match : Sulfotransfer_1 (HMM E-Value=0)
Length = 922
Score = 56.4 bits (130), Expect = 2e-08
Identities = 24/63 (38%), Positives = 37/63 (58%)
Frame = +1
Query: 283 EEMPSPRFIKTHXXXXXXXXXXXETAKVVYVARDPRDVVVSYYYLHKMVSKHLMRATFHD 462
+ +PSPR +KTH TAK +Y R+P+DV VSYYY H+ ++ + ++D
Sbjct: 471 KSLPSPRILKTHLQYHLVPRSGGCTAKYIYNIRNPKDVAVSYYYHHRTFKEYCFQEKWND 530
Query: 463 FWE 471
F+E
Sbjct: 531 FFE 533
Score = 54.8 bits (126), Expect = 7e-08
Identities = 23/63 (36%), Positives = 37/63 (58%)
Frame = +1
Query: 283 EEMPSPRFIKTHXXXXXXXXXXXETAKVVYVARDPRDVVVSYYYLHKMVSKHLMRATFHD 462
+ +PSPR +KTH TAK +Y R+P+DV VS+YY H+ + + + ++D
Sbjct: 97 KSLPSPRILKTHLQYHLVPRSDGCTAKYIYNIRNPKDVAVSFYYHHRTLKPYCFQEKWND 156
Query: 463 FWE 471
F+E
Sbjct: 157 FFE 159
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +3
Query: 513 HTNEAWVHRYHPNMHFVFYEDMIKDLPKEIRRVCKFLQRYYTDDQVKALSEHLSFESLRK 692
H + W HR PN+ + YEDM KD + + KFL R T++Q+ + SFE ++
Sbjct: 174 HVLDWWEHRDDPNILLLKYEDMKKDHRGAVAAIAKFLGRALTEEQLDRIVSQTSFEFMKS 233
Query: 693 NK 698
+
Sbjct: 234 QE 235
Score = 37.9 bits (84), Expect = 0.008
Identities = 18/56 (32%), Positives = 34/56 (60%)
Frame = +2
Query: 11 IYNMKVRPDDIWVITFPRSGTTWTQELIWLVENNLNYNAARERPLYERFPMLETTS 178
I N+++R DD+++ +P+SG TWT E++ V N ++ ++ P+ R L+ S
Sbjct: 23 IANLELRDDDVFLTAYPKSGQTWTIEIVKQVLNGGEFD--QQSPMLCRAVYLDAFS 76
>SB_27699| Best HMM Match : Sulfotransfer_1 (HMM E-Value=0.51)
Length = 149
Score = 54.8 bits (126), Expect = 7e-08
Identities = 23/63 (36%), Positives = 37/63 (58%)
Frame = +1
Query: 283 EEMPSPRFIKTHXXXXXXXXXXXETAKVVYVARDPRDVVVSYYYLHKMVSKHLMRATFHD 462
+ +PSPR +KTH TAK +Y R+P+DV VS+YY H+ + + + ++D
Sbjct: 12 KSLPSPRILKTHLQYHLVPRSDGCTAKYIYNIRNPKDVAVSFYYHHRTLKPYCFQEKWND 71
Query: 463 FWE 471
F+E
Sbjct: 72 FFE 74
>SB_39059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 185
Score = 46.8 bits (106), Expect = 2e-05
Identities = 17/54 (31%), Positives = 34/54 (62%)
Frame = +3
Query: 528 WVHRYHPNMHFVFYEDMIKDLPKEIRRVCKFLQRYYTDDQVKALSEHLSFESLR 689
W H PN+ F+ YEDM KDLP+ +R++ F+ R +++ + + +F++++
Sbjct: 69 WKHHEDPNILFLKYEDMKKDLPRTVRQIASFVGRSPSEEVIARIVRQTTFDAMK 122
>SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2670
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Frame = +2
Query: 5 DAIYNMKVRPDDIWVITFPRSGTTWTQELIWLVENNLNYNAA---RERPLYERFPMLE 169
D I N+ V+ D++V T+P+ GTTW E+IW + N+ + + + P E +P+++
Sbjct: 2396 DEIKNLPVQEGDVFVATYPKCGTTWVSEIIWQIFNDGQIDKSDIGKRVPFVEAYPLMQ 2453
Score = 45.6 bits (103), Expect = 4e-05
Identities = 17/54 (31%), Positives = 33/54 (61%)
Frame = +3
Query: 528 WVHRYHPNMHFVFYEDMIKDLPKEIRRVCKFLQRYYTDDQVKALSEHLSFESLR 689
W H PN+ F+ YEDM KDLP +R++ F+ R +++ + + +F++++
Sbjct: 2554 WKHHGDPNILFLKYEDMKKDLPSTVRQIASFVGRSPSEEVIARIVRQTTFDAMK 2607
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 277 MIEEMPSPRFIKTHXXXXXXXXXXXETAKVVY--VARDPRDVVVSYYYLHKMVSKHLMRA 450
+ +P+PR KTH TAK Y V R+P+D VS ++ K + A
Sbjct: 2468 LYRSVPAPRVFKTHLHHHLAPMGSDTTAKPKYINVMRNPKDCAVSMFFHCKGMEFFKCNA 2527
Query: 451 TFHDFWEAFRR 483
++ +F+EAF R
Sbjct: 2528 SWSEFFEAFIR 2538
>SB_12928| Best HMM Match : Sulfotransfer_1 (HMM E-Value=9.3e-10)
Length = 221
Score = 43.6 bits (98), Expect = 2e-04
Identities = 15/36 (41%), Positives = 26/36 (72%)
Frame = +2
Query: 5 DAIYNMKVRPDDIWVITFPRSGTTWTQELIWLVENN 112
D + +KV DD+ + ++P+SGTTWT E++W + N+
Sbjct: 41 DCLSRLKVCNDDVIITSWPKSGTTWTMEIVWQLYND 76
Score = 31.1 bits (67), Expect = 0.95
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +1
Query: 274 KMIEEMPSPRFIKTHXXXXXXXXXXXETA--KVVYVARDPRDVVVSYY 411
K + +P PR +KTH + K + V R+P+D VSY+
Sbjct: 111 KTFQGLPRPRLLKTHLNYQYVPMGEDRGSAPKTIVVMRNPKDAFVSYF 158
>SB_46599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4482
Score = 32.3 bits (70), Expect = 0.41
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +2
Query: 35 DDIWVITFPRSGTTWTQELIWLVENNLNYNAARER 139
DDIW IT TT+TQEL+ +N N A E+
Sbjct: 247 DDIWTITGRGQNTTFTQELVQASDNLAFINLAVEK 281
>SB_9654| Best HMM Match : Nop10p (HMM E-Value=2)
Length = 323
Score = 31.9 bits (69), Expect = 0.54
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Frame = +3
Query: 480 TRSVTLDPNRAHTNEAWVHRYHPNMHFV----FYEDMI---KDLPKEIRRVCKFLQRYYT 638
+ V L+ NR H V P M ++ F+E+ + K PK + + +Q+ ++
Sbjct: 179 SHKVNLESNRKHRGMETVRELSPKMPYITEFDFHEETLEFEKRFPKSLEQQRSGIQKQWS 238
Query: 639 DDQVKALSEHLSFESLRKNK 698
D+ K + +SLR+ K
Sbjct: 239 DESGKTYGFSYNNQSLRRQK 258
>SB_28368| Best HMM Match : Pentaxin (HMM E-Value=9.5e-11)
Length = 1160
Score = 31.5 bits (68), Expect = 0.72
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = +3
Query: 519 NEAWVHRYHPNMHFVFYEDMIKDLPKEIRRVCKFL----QRYYTDDQVK 653
N+ + +Y N+H + D+I + +RRVC FL + Y DD K
Sbjct: 1102 NQILIRKYKHNLHEIQSTDLISKPRETLRRVCSFLNLTCSKKYLDDCAK 1150
>SB_51627| Best HMM Match : Sulfotransfer_1 (HMM E-Value=0.017)
Length = 340
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = +3
Query: 504 NRAHTNEAWVHRYHPNMHFVFYEDMIKDLPKEIRRVCKFL----QRYYTDD 644
N A NE + ++ N+ + +D+I IRRVC FL + Y DD
Sbjct: 246 NLAAGNEVLIEKWRENILEIHSKDLISKPRDTIRRVCNFLDLTCSKQYLDD 296
>SB_14842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +1
Query: 154 ISNARNNQPDTGNSVRVHKSEFHEFGQLPRAYGRARYPSWKM-IEEMPSP 300
+ A+N QP R+ EFH F LP + GR+ + M + +P+P
Sbjct: 50 VQEAKNEQP------RIFAKEFHRFAMLPTSPGRSSPSFFPMSLSPLPTP 93
>SB_22840| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 4002
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 287 RCLPRDS*RHTCHYPFCRRPCWRRQRSCTWPG 382
+C R + RH C +PF R RR SCT G
Sbjct: 3503 KCKQRTTDRHCCSFPFIYR--GRRYNSCTKAG 3532
>SB_20575| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 1106
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Frame = +2
Query: 56 FPRSGTTWTQELI-WLVEN----NLNYNAARERPLYERFPMLETTSQIPEIAYEFIKANF 220
+ ++G+T++QE++ W++ LNY A E L + +T + + I Y+ I +
Sbjct: 539 YEKNGSTYSQEILYWMMAEVHFIRLNYKEALEYFLLAEYYSPKTDTPLLSIIYQCIGKLY 598
Query: 221 MNLGSF 238
+ +G F
Sbjct: 599 VCMGQF 604
>SB_28477| Best HMM Match : 7tm_1 (HMM E-Value=4.6e-20)
Length = 351
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +2
Query: 47 VITFPRSGTTWTQELIWLVENNLNYNAARERPLYERFPMLETTSQIPEIAYEFIKANFMN 226
+IT RS T ++ WLV + Y P + F + +T+Q + E I+
Sbjct: 262 IITDVRSTLTCRFQIFWLVARTMGYTNTAFNP-WIYFLFVSSTAQNRQRTMELIERGRRF 320
Query: 227 LGSFQGLTEGP 259
+ ++ LT P
Sbjct: 321 ISTYSVLTRNP 331
>SB_38055| Best HMM Match : zf-CW (HMM E-Value=1.9)
Length = 439
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -3
Query: 348 QGRRQKG*WQVCLYESRGRHLLYHLPARVPGPSVSP 241
Q RQ+ W Y+++ + ++ +LP++ PG V P
Sbjct: 347 QHTRQRTRWSYVTYQAKNQVVMCYLPSKEPGGLVLP 382
>SB_31213| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 919
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +3
Query: 285 GDAFPEIHKDTPATIPSAADPAGDGKGRVRGQGSKGCCGFILLSTQNGQ 431
GDA P+ +P+T A G G+GR RG+G G + T G+
Sbjct: 785 GDAEPKSETASPST---AEGKRGRGRGRARGRGRTRGRGTAPIRTSRGR 830
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,636,470
Number of Sequences: 59808
Number of extensions: 530413
Number of successful extensions: 1503
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1499
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1925890720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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