Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0870
(685 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 23 2.3
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 21 7.1
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 21 9.4
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 21 9.4
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 9.4
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 21 9.4
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 9.4
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 9.4
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 21 9.4
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 21 9.4
AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax pr... 21 9.4
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 21 9.4
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 9.4
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 23.0 bits (47), Expect = 2.3
Identities = 14/66 (21%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +3
Query: 327 RDREVYNVLAPEQEEKRNAQRSRCNGRQINSWLQEVDD---KWEKIKEGMLRRQHTEAQT 497
R++E+ + A E++++ + + +I ++ D+ K +K K+ ++ ++TE +
Sbjct: 219 REKELSDDEAEEEKKEEEGEDKDKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEE 278
Query: 498 LHAVKP 515
L+ KP
Sbjct: 279 LNKTKP 284
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 21.4 bits (43), Expect = 7.1
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 106 VNPEPQIEIPHN 141
+NP+PQI P N
Sbjct: 417 INPQPQITSPSN 428
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +3
Query: 405 RQINSWLQEVDDKWEK 452
RQI W Q KW+K
Sbjct: 275 RQIKIWFQNRRMKWKK 290
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +3
Query: 405 RQINSWLQEVDDKWEK 452
RQI W Q KW+K
Sbjct: 262 RQIKIWFQNRRMKWKK 277
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +3
Query: 405 RQINSWLQEVDDKWEK 452
RQI W Q KW+K
Sbjct: 262 RQIKIWFQNRRMKWKK 277
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +3
Query: 405 RQINSWLQEVDDKWEK 452
RQI W Q KW+K
Sbjct: 284 RQIKIWFQNRRMKWKK 299
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +3
Query: 405 RQINSWLQEVDDKWEK 452
RQI W Q KW+K
Sbjct: 262 RQIKIWFQNRRMKWKK 277
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +3
Query: 405 RQINSWLQEVDDKWEK 452
RQI W Q KW+K
Sbjct: 218 RQIKIWFQNRRMKWKK 233
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +3
Query: 405 RQINSWLQEVDDKWEK 452
RQI W Q KW+K
Sbjct: 275 RQIKIWFQNRRMKWKK 290
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +3
Query: 405 RQINSWLQEVDDKWEK 452
RQI W Q KW+K
Sbjct: 262 RQIKIWFQNRRMKWKK 277
>AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax
protein.
Length = 100
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +3
Query: 405 RQINSWLQEVDDKWEK 452
RQI W Q KW+K
Sbjct: 50 RQIKIWFQNRRMKWKK 65
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +3
Query: 405 RQINSWLQEVDDKWEK 452
RQI W Q KW+K
Sbjct: 286 RQIKIWFQNRRMKWKK 301
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +3
Query: 405 RQINSWLQEVDDKWEK 452
RQI W Q KW+K
Sbjct: 262 RQIKIWFQNRRMKWKK 277
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,914
Number of Sequences: 336
Number of extensions: 4115
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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