Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0865
(706 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 6e-15
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 73 2e-13
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 65 6e-11
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 62 6e-10
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 60 2e-09
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 50 2e-06
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 49 3e-06
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 48 1e-05
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 46 4e-05
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 43 3e-04
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 42 4e-04
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 42 5e-04
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 40 0.003
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 40 0.003
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 36 0.024
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 36 0.032
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 34 0.098
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 34 0.13
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 33 0.17
SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.91
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 30 1.6
SB_51151| Best HMM Match : Vicilin_N (HMM E-Value=0.19) 29 2.8
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 29 2.8
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_6554| Best HMM Match : Isy1 (HMM E-Value=0) 29 3.7
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 78.2 bits (184), Expect = 6e-15
Identities = 35/60 (58%), Positives = 45/60 (75%)
Frame = +3
Query: 498 KEFSGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 677
++ G+AKTGSGKT A++ PA+VHI +QP ++ GDGPI L+ APTREL QQI A FG
Sbjct: 555 RDIIGIAKTGSGKTAAFLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFG 614
Score = 72.5 bits (170), Expect = 3e-13
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Frame = +1
Query: 259 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGDEVHNPIQYFEEANFPDYVQQGVKT 438
+PFNKNFY+ HP + K+S E+++ R + VSG P F F + + ++
Sbjct: 475 KPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDEQMMASIRK 534
Query: 439 MGYKEPTPIQAQGWPIAMSGKNLVA*PK----RVPAKRWP 546
+ Y +PT IQ Q PIA+SG++++ K + A WP
Sbjct: 535 LEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWP 574
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 73.3 bits (172), Expect = 2e-13
Identities = 33/53 (62%), Positives = 41/53 (77%)
Frame = +3
Query: 546 YILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTC 704
+ILP IVHIN+QP ++ GDGPI LVL PTRELAQQ+Q+VA G +R+TC
Sbjct: 113 FILPGIVHINHQPLLQPGDGPIVLVLCPTRELAQQVQEVAYSVGKHCKLRSTC 165
Score = 61.3 bits (142), Expect = 7e-10
Identities = 27/56 (48%), Positives = 37/56 (66%)
Frame = +1
Query: 307 RSPYEVEEYRNNHEVTVSGDEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 474
R +EV+ YR + ++TV+G V P+ FEE+ FPDY+Q K G+ EPT IQAQ
Sbjct: 57 RGQHEVDAYRRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQ 112
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 64.9 bits (151), Expect = 6e-11
Identities = 34/70 (48%), Positives = 45/70 (64%), Gaps = 4/70 (5%)
Frame = +3
Query: 498 KEFSGVAKTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVA 665
++ GVA+TGSGKT A+ +P +V I P I R + GP AL+LAPTRELAQQI++
Sbjct: 139 RDIIGVAETGSGKTAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEI 198
Query: 666 ADFGHTSYVR 695
FG +R
Sbjct: 199 LKFGRPLGIR 208
Score = 52.4 bits (120), Expect = 3e-07
Identities = 20/60 (33%), Positives = 37/60 (61%)
Frame = +1
Query: 331 YRNNHEVTVSGDEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 510
+R + ++ G + PI+ ++EA PD + + V +GYK+PTPIQ Q PI + ++++
Sbjct: 83 FREDFNISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDII 142
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 62.9 bits (146), Expect = 2e-10
Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Frame = +1
Query: 259 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGDEVHNPIQYFEEANFPDYVQQGVK 435
QPF K+FY P + K +P E +E+R + E + V G P++ + + + +K
Sbjct: 62 QPFRKDFYVEVPELAKMTPEETDEFRLSLENIHVRGKNAPKPVKTWAQTGVQLKILDVLK 121
Query: 436 TMGYKEPTPIQAQGWPIAMSGKNLVA---*PKRVPAKRWPTSCQPLC 567
Y++PTPIQAQ P+ MSG++++A P R A + C+ C
Sbjct: 122 KNSYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELAIQIHRECKKFC 168
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +3
Query: 534 KTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTC 704
K +Y P + P I G IA+V+ PTRELA QI + F + +R C
Sbjct: 121 KKNSYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELAIQIHRECKKFCKPNNLRCVC 177
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 61.7 bits (143), Expect = 6e-10
Identities = 27/52 (51%), Positives = 37/52 (71%)
Frame = +3
Query: 498 KEFSGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 653
++ G+A+TGSGKTLAY LP + + + P GD P+AL+L PTREL QQ+
Sbjct: 110 RDIIGLAETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQV 161
Score = 50.8 bits (116), Expect = 1e-06
Identities = 28/101 (27%), Positives = 49/101 (48%)
Frame = +1
Query: 265 FNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGDEVHNPIQYFEEANFPDYVQQGVKTMG 444
F ++YD + V + S V+E R + + + G++ PI+ F + N P + +
Sbjct: 32 FMWSYYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKN 91
Query: 445 YKEPTPIQAQGWPIAMSGKNLVA*PKRVPAKRWPTSCQPLC 567
++ PTPIQ Q MSG++++ + K S PLC
Sbjct: 92 FQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTLAYSL-PLC 131
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/91 (29%), Positives = 49/91 (53%)
Frame = +1
Query: 280 YDPHPTVLKRSPYEVEEYRNNHEVTVSGDEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 459
Y HPT+ + +V++ R+ E+ V G+ V +P+ F +F + + + + GY PT
Sbjct: 161 YKEHPTIAALTAEQVKQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPT 220
Query: 460 PIQAQGWPIAMSGKNLVA*PKRVPAKRWPTS 552
PIQ Q P+ +SG++++ K P+S
Sbjct: 221 PIQMQVLPVLLSGRDVMVCASTGSGKLLPSS 251
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 50.4 bits (115), Expect = 1e-06
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +3
Query: 498 KEFSGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 677
++ A+TGSGKT AY+LP + + Q P+AL +APTRELA+QI A F
Sbjct: 517 RDLMACAQTGSGKTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFS 576
Query: 678 -HT 683
HT
Sbjct: 577 DHT 579
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +1
Query: 355 VSGDEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 513
VSG+ I F E F + + + GY+ PTP+Q PI M+G++L+A
Sbjct: 469 VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMA 521
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 49.6 bits (113), Expect = 2e-06
Identities = 28/61 (45%), Positives = 38/61 (62%)
Frame = +3
Query: 498 KEFSGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 677
++ G AKTGSGKTLA+++P I + Q DG ALV++PTRELA Q +V G
Sbjct: 88 RDVLGAAKTGSGKTLAFLIPIIETLWRQKWTSM-DGLGALVISPTRELAYQTFEVLVKIG 146
Query: 678 H 680
+
Sbjct: 147 N 147
Score = 31.9 bits (69), Expect = 0.52
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +1
Query: 382 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 510
++ F + G+ G+ PT IQ QG P+A+SG++++
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVL 91
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 49.2 bits (112), Expect = 3e-06
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +3
Query: 432 KDNGLQRTDAHSSSRLADSYVWKEFSGVAKTGSGKTLAYILPAIVHINN-QPPIRRGDGP 608
+D G+ +S Y ++ G A+TG+GKTL++ LP + + + + +RG P
Sbjct: 89 EDRGITYLFPIQASTFNYIYDGEDVIGQARTGTGKTLSFALPLVEKLQDGKLSQKRGRAP 148
Query: 609 IALVLAPTRELAQQI 653
LV+APTRELA+Q+
Sbjct: 149 KVLVMAPTRELAKQV 163
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 48.4 bits (110), Expect = 6e-06
Identities = 27/80 (33%), Positives = 43/80 (53%)
Frame = +3
Query: 432 KDNGLQRTDAHSSSRLADSYVWKEFSGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPI 611
KD G +A ++ G AKTGSGKTLA+++P +V + + + +G
Sbjct: 588 KDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVP-VVELLYKLQFKTRNGTG 646
Query: 612 ALVLAPTRELAQQIQQVAAD 671
++++PTREL+ Q VA D
Sbjct: 647 VIIISPTRELSLQTYGVARD 666
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +1
Query: 319 EVEEYRNNHEVTVSGDEVHNPIQYF----EEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 486
++ +R+ + V G +V +P++ F E FPDY+ V+ GY PTPIQ Q P+
Sbjct: 137 KINLFRHEQHIYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTPTPIQMQATPL 196
Query: 487 AMSG 498
G
Sbjct: 197 MAHG 200
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +3
Query: 546 YILPAIVHINNQPPIRRG---DGPIALVLAPTRELAQQI 653
Y P + + P + G G A+V++PTRELAQQI
Sbjct: 183 YTTPTPIQMQATPLMAHGPKKSGFRAVVVSPTRELAQQI 221
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +3
Query: 498 KEFSGVAKTGSGKTLAYILPAIVHINN----QPPIRRGDGPIALVLAPTRELAQQIQQVA 665
++ A+TGSGKT A++LP + + N P A+ +APTRELA QI A
Sbjct: 749 RDVMACAQTGSGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEA 808
Query: 666 ADFGHTSYVR 695
F H + +R
Sbjct: 809 RKFAHGTMLR 818
Score = 45.6 bits (103), Expect = 4e-05
Identities = 22/56 (39%), Positives = 33/56 (58%)
Frame = +1
Query: 346 EVTVSGDEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 513
EV VSG+ I FEEAN + V+ YK+PTP+Q PI ++G++++A
Sbjct: 698 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMA 753
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 45.6 bits (103), Expect = 4e-05
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +3
Query: 516 AKTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQIQQVAADFGHTSYV 692
A++G+GKT + + + I+ + G D ALVLAPTRELAQQIQ+V G +V
Sbjct: 129 AQSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQIQKVVLALGDYMHV 188
Query: 693 R 695
+
Sbjct: 189 K 189
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 45.6 bits (103), Expect = 4e-05
Identities = 22/56 (39%), Positives = 33/56 (58%)
Frame = +1
Query: 346 EVTVSGDEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 513
EV VSG+ I FEEAN + V+ YK+PTP+Q PI ++G++++A
Sbjct: 121 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMA 176
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/48 (52%), Positives = 30/48 (62%)
Frame = +3
Query: 510 GVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 653
G AKTGSGKT A+ LP + + + P G A+VL PTRELA QI
Sbjct: 49 GCAKTGSGKTAAFALPILQKLCDDP-----YGIFAVVLTPTRELAFQI 91
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 42.3 bits (95), Expect = 4e-04
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Frame = +3
Query: 516 AKTGSGKTLAYILPAIVHINNQPPIRRG-----DGPIALVLAPTRELAQQIQQVAADFGH 680
A+TGSGKTLAY+ P +VH + R G P A ++ P RELA QI + A H
Sbjct: 422 AQTGSGKTLAYLAP-LVHRLREDEERHGILARLKRPRACIVVPARELATQILKTAKSLCH 480
Query: 681 TSYVRN 698
+ R+
Sbjct: 481 HARFRS 486
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/68 (33%), Positives = 39/68 (57%)
Frame = +3
Query: 498 KEFSGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 677
K+ +A+TGSGKT A+++P + G AL+L+PTRELA Q Q+ + G
Sbjct: 319 KDVVAMARTGSGKTAAFLIPMFEKLQTHTA---KVGIRALILSPTRELALQTQKFIKELG 375
Query: 678 HTSYVRNT 701
+ ++++
Sbjct: 376 RFTGLKSS 383
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 41.9 bits (94), Expect = 5e-04
Identities = 25/60 (41%), Positives = 34/60 (56%)
Frame = +3
Query: 498 KEFSGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 677
K+ G+A+TGSGKT A+ LP + + + P AL+L PTRELA QI + G
Sbjct: 2 KDVIGLAETGSGKTGAFALPILQALLDNP-----QRLFALILTPTRELAFQISEQCEALG 56
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 40.7 bits (91), Expect = 0.001
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 15/89 (16%)
Frame = +3
Query: 435 DNGLQRTDAHSSSRLADSYVW-KEFSGVAKTGSGKTLAYILPAIVHIN-------NQPPI 590
D G + S + + ++ ++ G A+TGSGKTLA+ +P I HI Q P
Sbjct: 147 DQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIPIIQHIEAYKKRKAEQSPS 206
Query: 591 -------RRGDGPIALVLAPTRELAQQIQ 656
+G +AL++APTRELA Q++
Sbjct: 207 DKESDLESQGYPLLALIMAPTRELALQVK 235
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/54 (44%), Positives = 34/54 (62%)
Frame = +3
Query: 516 AKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 677
A++G+GKT + + + I+ Q +R P ALVL+PTRELA QIQ+V G
Sbjct: 41 AQSGTGKTATFSISVLQAIDTQ--LRE---PQALVLSPTRELANQIQKVVLALG 89
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/54 (40%), Positives = 30/54 (55%)
Frame = +3
Query: 516 AKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 677
AK G+GKT AY++P + + + ALVL PTRELA Q Q+ + G
Sbjct: 91 AKNGTGKTAAYLVPLLERTDTTKNCIQ-----ALVLVPTRELALQTSQICIELG 139
Score = 32.7 bits (71), Expect = 0.30
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +1
Query: 391 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA*PKRVPAK 537
FE+ + G+ G+ +P+PIQ + P+A++G++++A K K
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGK 97
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/54 (40%), Positives = 30/54 (55%)
Frame = +3
Query: 516 AKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 677
AK G+GKT AY++P + + + ALVL PTRELA Q Q+ + G
Sbjct: 91 AKNGTGKTAAYLVPLLERTDTTKNCIQ-----ALVLVPTRELALQTSQICIELG 139
Score = 32.7 bits (71), Expect = 0.30
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +1
Query: 391 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA*PKRVPAK 537
FE+ + G+ G+ +P+PIQ + P+A++G++++A K K
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGK 97
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 36.3 bits (80), Expect = 0.024
Identities = 21/61 (34%), Positives = 34/61 (55%)
Frame = +3
Query: 468 SSRLADSYVWKEFSGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQ 647
+S + + + K+ A TG+GKT A++LP + + +P + LV+ PTRELA
Sbjct: 38 ASTIPVALMGKDVCACAATGTGKTAAFMLPILERLLYRP--TQSPAIRVLVITPTRELAI 95
Query: 648 Q 650
Q
Sbjct: 96 Q 96
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 364 DEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 513
DEV N +E + + V +G+ PTPIQA P+A+ GK++ A
Sbjct: 7 DEVLNAYDSLDE----EAEDRAVNELGFLHPTPIQASTIPVALMGKDVCA 52
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 35.9 bits (79), Expect = 0.032
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = +3
Query: 498 KEFSGVAKTGSGKTLAYILPAIVHINNQPPIRR---GDGPIALVLAPTRELAQQIQQVAA 668
++ +GVA GSGK LAY+LP I I + +GP+ L+L + ++ V
Sbjct: 225 RDVAGVAIEGSGKRLAYLLPIIHQITESSVYQELPLANGPLVLILCTNWQNTARVYGVCE 284
Query: 669 D 671
D
Sbjct: 285 D 285
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 34.3 bits (75), Expect = 0.098
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +3
Query: 516 AKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA-QQIQQVAADFGHTSYV 692
++TG+GK+L ++LP++ Q P RG G I ++ PTRELA Q + +V+ G S V
Sbjct: 204 SETGTGKSLVFLLPSV-----QDP-GRGYGTI--IVVPTRELASQMLYEVSRLLGDKSIV 255
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 382 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 513
I FE+ + + + V GYK+PTP+Q PI ++L+A
Sbjct: 874 ILQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLMA 917
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 498 KEFSGVAKTGSGKTLAYILPAIVHINNQPP 587
++ A+TGSGKT A+++P + I + P
Sbjct: 913 RDLMACAQTGSGKTAAFLIPILSRIYMEGP 942
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +3
Query: 516 AKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTSYV 692
+++G+GKT A++L + ++ P P + L+PT ELA+Q +VA G H ++
Sbjct: 149 SQSGTGKTAAFVLTMLSRVDATKPY-----PQVICLSPTYELARQTGKVAEAMGKHCPHI 203
Query: 693 R 695
+
Sbjct: 204 K 204
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +1
Query: 343 HEVTVSGDEVHNPI---QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMS 495
HEV V + +P+ + FEE +++GV MG+ +P+ IQ P+ ++
Sbjct: 86 HEVEVLRSDPSSPLYSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLA 139
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +3
Query: 606 PIALVLAPTRELAQQIQQVAADFG 677
P ALVL+PTRELA QIQ+V G
Sbjct: 4 PQALVLSPTRELANQIQKVVLALG 27
>SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 31.1 bits (67), Expect = 0.91
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +1
Query: 364 DEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGW 480
+++H P++ + FP Y + Y P P QA W
Sbjct: 5 NDIHGPVRKLHKHGFPGYEEDYAAVFKYPTPWPEQAMEW 43
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +3
Query: 516 AKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 677
AK+G+GKT + + A+ ++ I + ++L PTRE+A Q++ V G
Sbjct: 57 AKSGTGKTCVFSVIALENV-----ITESNCIQIIILTPTREIAVQVKDVICAIG 105
>SB_51151| Best HMM Match : Vicilin_N (HMM E-Value=0.19)
Length = 493
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = -3
Query: 170 YCHRCQIEKNYRRICCLL----QIWNHRFHGYYSSYQT*LFF 57
+CHR Q NY C ++ Q+W+H + SS ++ +F+
Sbjct: 178 FCHRQQYRHNYYNSCLVITFFRQMWDHLWANVGSSVESSVFY 219
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +3
Query: 516 AKTGSGKTLAYILPAIVHINNQPPIRRGDGPIA-LVLAPTRELAQQIQQ 659
AK+G GKT ++L + + P+ DG ++ LV+ TRELA QI +
Sbjct: 91 AKSGMGKTAVFVLATLQQLE---PV---DGQVSVLVMCHTRELAFQIHK 133
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +3
Query: 516 AKTGSGKTLAYILPAIVHINNQPPIRRGDGPIA-LVLAPTRELAQQIQQ 659
AK+G GKT ++L + + P+ DG ++ LV+ TRELA QI +
Sbjct: 91 AKSGMGKTAVFVLATLQQLE---PV---DGQVSVLVMCHTRELAFQIHK 133
>SB_6554| Best HMM Match : Isy1 (HMM E-Value=0)
Length = 675
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +1
Query: 277 FYDPHPTVLKRSPYEVEEYRNN--HEVTVSGDEVHNPIQYFEEANFPDY 417
+ D VL E EE NN H++ + + +HNP YFE+ + DY
Sbjct: 217 YRDEDDGVLVPIEQEAEEEVNNKLHKILIV-NMIHNPFNYFEKKSPTDY 264
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,081,883
Number of Sequences: 59808
Number of extensions: 451830
Number of successful extensions: 1250
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1234
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1853669818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -