Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0852
         (469 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g44630.3 68416.m04798 disease resistance protein RPP1-WsB-lik...    27   4.8  
At3g44630.2 68416.m04800 disease resistance protein RPP1-WsB-lik...    27   4.8  
At3g44630.1 68416.m04799 disease resistance protein RPP1-WsB-lik...    27   4.8  
At3g49650.1 68416.m05426 kinesin motor protein-related several k...    27   6.3  
At3g44990.1 68416.m04847 xyloglucan:xyloglucosyl transferase, pu...    27   8.4  

>At3g44630.3 68416.m04798 disease resistance protein RPP1-WsB-like
           (TIR-NBS-LRR class), putative domain signature
           TIR-NBS-LRR exists, suggestive of a disease resistance
           protein., closest Col-0 homolog to RPP1-WsB
          Length = 1240

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = -1

Query: 415 GKYVESNVPPH*YQLKSDVLFEFLICWQETIRV*VLIKFAH 293
           GK+++     H    KS + F+  I W++ ++V +L KF+H
Sbjct: 538 GKFLDVRQGLHVLAQKSLISFDEEISWKQIVQVLLLNKFSH 578


>At3g44630.2 68416.m04800 disease resistance protein RPP1-WsB-like
           (TIR-NBS-LRR class), putative domain signature
           TIR-NBS-LRR exists, suggestive of a disease resistance
           protein., closest Col-0 homolog to RPP1-WsB
          Length = 1214

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = -1

Query: 415 GKYVESNVPPH*YQLKSDVLFEFLICWQETIRV*VLIKFAH 293
           GK+++     H    KS + F+  I W++ ++V +L KF+H
Sbjct: 538 GKFLDVRQGLHVLAQKSLISFDEEISWKQIVQVLLLNKFSH 578


>At3g44630.1 68416.m04799 disease resistance protein RPP1-WsB-like
           (TIR-NBS-LRR class), putative domain signature
           TIR-NBS-LRR exists, suggestive of a disease resistance
           protein., closest Col-0 homolog to RPP1-WsB
          Length = 1214

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = -1

Query: 415 GKYVESNVPPH*YQLKSDVLFEFLICWQETIRV*VLIKFAH 293
           GK+++     H    KS + F+  I W++ ++V +L KF+H
Sbjct: 538 GKFLDVRQGLHVLAQKSLISFDEEISWKQIVQVLLLNKFSH 578


>At3g49650.1 68416.m05426 kinesin motor protein-related several
           kinesin-like proteins
          Length = 813

 Score = 27.1 bits (57), Expect = 6.3
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -3

Query: 350 VFNMLAGDDKSLSFNKICSSIQILNRIFY 264
           +F+M+  D  S  F   CS +++ N + Y
Sbjct: 131 IFDMIKSDKSSDEFEVTCSYLEVYNEVIY 159


>At3g44990.1 68416.m04847 xyloglucan:xyloglucosyl transferase,
           putative / xyloglucan endotransglycosylase, putative /
           endo-xyloglucan transferase, putative
          Length = 293

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 466 MILYCPAIEHTQSFHRPGKYVESNVP 389
           +++ CP+  H+Q    PG Y  S VP
Sbjct: 10  LLVLCPSSGHSQRSPSPGYYPSSRVP 35


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,813,139
Number of Sequences: 28952
Number of extensions: 156054
Number of successful extensions: 330
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 330
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 791932800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)