Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0842
         (779 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    25   0.68 
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    23   3.6  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    22   6.3  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          22   6.3  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   8.4  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   8.4  

>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 25.0 bits (52), Expect = 0.68
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -3

Query: 609 VLVFGEHFLDSFKRRRSFHVFFNPVLNFIIFFPHL 505
           V++    FLD+ ++RR+F    + +LN   F+ HL
Sbjct: 220 VMILRSRFLDARRKRRNFSKQASEILN-EYFYSHL 253


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 448 MEKQKRNSTVAERKTGTVEQVREEYD 525
           +EK KR+ +   + T T+E +  +YD
Sbjct: 94  VEKAKRDLSSVHKTTLTIENLLADYD 119


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 168 RPNNLYMNSSRLMPQQPEVFL 230
           RPN  Y+ + +  PQQ EV L
Sbjct: 46  RPNWSYLRTPQFEPQQFEVSL 66


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 168 RPNNLYMNSSRLMPQQPEVFL 230
           RPN  Y+ + +  PQQ EV L
Sbjct: 66  RPNWSYLRTPQFEPQQFEVSL 86


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = -3

Query: 630 GVALVMFVLVFGEHFLDSFKRRRSFHVFFNPVL 532
           G+   ++  +FG  + D     ++FH  F P+L
Sbjct: 252 GIFCSLYFCIFGYIYDDEMVVPQNFHDIFLPLL 284


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = -3

Query: 630 GVALVMFVLVFGEHFLDSFKRRRSFHVFFNPVL 532
           G+   ++  +FG  + D     ++FH  F P+L
Sbjct: 77  GIFCSLYFCIFGYIYDDEMVVPQNFHDIFLPLL 109


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,326
Number of Sequences: 336
Number of extensions: 3536
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21065107
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)