Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0842
(779 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57503| Best HMM Match : Brevenin (HMM E-Value=2) 32 0.45
SB_25387| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.60
SB_41743| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29) 31 1.4
SB_5257| Best HMM Match : SlyX (HMM E-Value=2.2) 31 1.4
SB_52217| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_54674| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_52890| Best HMM Match : PH (HMM E-Value=1e-06) 30 2.4
SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17) 29 3.2
SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_41731| Best HMM Match : bZIP_1 (HMM E-Value=0.014) 29 3.2
SB_24737| Best HMM Match : KID (HMM E-Value=0.096) 29 4.2
SB_11059| Best HMM Match : KID (HMM E-Value=0.046) 29 4.2
SB_4812| Best HMM Match : Sulfatase (HMM E-Value=0) 29 4.2
SB_47007| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_38212| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_22720| Best HMM Match : KID (HMM E-Value=0.0014) 29 5.6
SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 29 5.6
SB_14703| Best HMM Match : Borrelia_orfA (HMM E-Value=0.14) 29 5.6
SB_8983| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_5871| Best HMM Match : IBR (HMM E-Value=0.00018) 29 5.6
SB_3290| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_45659| Best HMM Match : E_Pc_C (HMM E-Value=1.2) 28 7.4
SB_26241| Best HMM Match : B1 (HMM E-Value=2.5) 28 7.4
SB_23786| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_47294| Best HMM Match : Vicilin_N (HMM E-Value=2.8) 28 7.4
SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_56618| Best HMM Match : DUF1213 (HMM E-Value=0.022) 28 9.8
SB_44875| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_35998| Best HMM Match : SURF6 (HMM E-Value=4.8) 28 9.8
SB_34393| Best HMM Match : RVT_1 (HMM E-Value=2e-36) 28 9.8
SB_9567| Best HMM Match : CASP_C (HMM E-Value=2.8e-07) 28 9.8
SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) 28 9.8
SB_13359| Best HMM Match : DMAP1 (HMM E-Value=0) 28 9.8
SB_11369| Best HMM Match : bZIP_2 (HMM E-Value=4.3) 28 9.8
SB_8304| Best HMM Match : PLAT (HMM E-Value=0) 28 9.8
>SB_57503| Best HMM Match : Brevenin (HMM E-Value=2)
Length = 247
Score = 32.3 bits (70), Expect = 0.45
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Frame = +1
Query: 385 NNKRLQKQRFYHIRSRKTGDGMEKQKRNSTVAERKTGTVEQVREEYDKIQHRIK--ENMK 558
+ K +++R +H R +G +K+ ST+ E + G + R+E D+ R+K +++
Sbjct: 78 HKKHKRRKRGHHKRHEL--EGQPPKKKLSTIFEPEEGELNAERKEADEHNERLKRDDDVD 135
Query: 559 RPTPFERVKKMFSKNKN---KHHESNTGT 636
KK SK+ N K ES+TG+
Sbjct: 136 HADNTATKKKTDSKDSNRTRKDSESSTGS 164
>SB_25387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 31.9 bits (69), Expect = 0.60
Identities = 15/64 (23%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +1
Query: 451 EKQKRNSTVAERKTGTVEQVREEYDKIQHRIKE-NMKRPTPFERVKKMFSKNKNKHHESN 627
E++K+ E+K TVE V+ E +K++ +++ ++ F ++KK+ S+++ K
Sbjct: 41 EEEKKRKREVEKKKETVEDVKIEIEKLKAKLESLKNEKHQMFLQLKKVLSEDEEKRQRER 100
Query: 628 TGTI 639
+
Sbjct: 101 QAAL 104
>SB_41743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1436
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +3
Query: 162 KFRPNNLYMNSSRL--MPQQPEVFLYSPTEESKRST 263
K+RP +Y+++ L +P +PE F+ TEE R+T
Sbjct: 878 KYRPGRIYIDADTLSRLPLEPEEFMTCCTEEMDRAT 913
>SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29)
Length = 2072
Score = 30.7 bits (66), Expect = 1.4
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +1
Query: 421 IRSRKTGDGMEKQKRNSTVAERKTGTVEQVREEYDKIQHRIKENMKRPTPFERVKKMFSK 600
IR+ K E+ + K ++E+ EY +++E MK ER K +F+K
Sbjct: 450 IRNEKLLKRSEEANGEIKIWREKCSSIEK---EYQTTIAQLREEMKLKWKSER-KSLFNK 505
Query: 601 NKN--KHHESNTGTIEKR 648
NKN K +E N +E +
Sbjct: 506 NKNKVKQYEENITELEMK 523
>SB_5257| Best HMM Match : SlyX (HMM E-Value=2.2)
Length = 641
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +2
Query: 350 NSPLTGQEELAEIINDF---KNNVFTISEVEKLVMEWKNRNETQQSLKEKQEQLNKCGKN 520
N P+T E+L +I +F KN T S+ +K W N T ++ ++ +N K
Sbjct: 100 NMPVTSYEKLGRLIKEFEPFKNMWLTASDWQKWHDSWMNDPLTTIDAEQLEQNVNNSFKT 159
Query: 521 MIK 529
+ K
Sbjct: 160 IFK 162
>SB_52217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +1
Query: 421 IRSRKTGDGMEKQKRNST---VAERKTGTVEQVREEYDKIQHRIKENMKR 561
I + + GMEK++ +S + RK +E+ REE D I +KE +KR
Sbjct: 56 INTAQIKSGMEKEESDSRWRQIVNRKNQEIERFREELDMILEALKE-LKR 104
>SB_54674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +1
Query: 421 IRSRKTGDGMEKQKRNST---VAERKTGTVEQVREEYDKIQHRIKENMKR 561
I + + GMEK++ +S + RK +E+ REE D I +KE +KR
Sbjct: 1087 INTAQIKSGMEKEESDSRWRQIVNRKNQEIERFREELDMILEALKE-LKR 1135
>SB_52890| Best HMM Match : PH (HMM E-Value=1e-06)
Length = 449
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +2
Query: 323 SGSIKTSKENSPLTGQEELAEIINDFKNNVFTISEVEKLVMEWKNRNETQQSLKEKQEQ 499
S S S EN PL + ELA++ +D + + +V W+ R + SL+EK+ Q
Sbjct: 389 SPSSDESDENIPLPPRPELADVNSDSASTIKCTYDV------WQRRKPERSSLREKKTQ 441
>SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17)
Length = 1249
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +1
Query: 391 KRLQKQRFYHIRSRKTGDGMEKQKRNSTVAERKTGTVEQVREEYDKIQHRIKE 549
+RLQ+QR ++ K E++KR ER+ Q REE D+I+ +E
Sbjct: 480 RRLQEQREKELKRYKELQMAEEEKRRKETEERE----RQAREEEDRIRREREE 528
>SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2332
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +2
Query: 236 THGRIQTFNIETPTSDISQINLSTKDIRSSGSIKTSKENSPLTGQEELAEIINDFK 403
T+ I + NIETP SD++ NL + + + E+ G+EE E+ +F+
Sbjct: 1337 TYQEILSANIETPASDVASGNLLIHKTKPNNGVSRHIED----GKEEGGEVEENFR 1388
>SB_41731| Best HMM Match : bZIP_1 (HMM E-Value=0.014)
Length = 289
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/61 (26%), Positives = 32/61 (52%)
Frame = +1
Query: 394 RLQKQRFYHIRSRKTGDGMEKQKRNSTVAERKTGTVEQVREEYDKIQHRIKENMKRPTPF 573
+LQ+ R + + + +E Q R + + R +G E E +D ++ ++KEN+K+
Sbjct: 81 KLQEAEVEISRVQNSLEYLENQSRRNNI--RVSGIPESPGESWDDVEAKVKENIKQALGL 138
Query: 574 E 576
E
Sbjct: 139 E 139
>SB_24737| Best HMM Match : KID (HMM E-Value=0.096)
Length = 636
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = +1
Query: 361 DRPRGISGNNKRLQKQRFYHIRSRKTGDGMEKQKRNSTVAERKTGTVEQVREEYDKIQHR 540
DR + I K L+ Q H R + T + + + V ERK G +V +++
Sbjct: 149 DREKSIDKLEKELKDQEAKHNRQKNTLE--QTVAKMKEVMERKGGDANKVNARVAELEKE 206
Query: 541 IKENMK 558
+KE K
Sbjct: 207 LKEKTK 212
>SB_11059| Best HMM Match : KID (HMM E-Value=0.046)
Length = 296
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = +1
Query: 361 DRPRGISGNNKRLQKQRFYHIRSRKTGDGMEKQKRNSTVAERKTGTVEQVREEYDKIQHR 540
DR + I K L+ Q H R + T + + + V ERK G +V +++
Sbjct: 57 DRGKSIDKLEKELKDQEAKHNRQKNTLE--QTVAKMKEVMERKGGNANKVNARVAELEKE 114
Query: 541 IKENMK 558
+KE K
Sbjct: 115 LKEKTK 120
>SB_4812| Best HMM Match : Sulfatase (HMM E-Value=0)
Length = 1040
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 277 SWRFNVERLDSSVGEYKNTSGCCGMRRELFIY 182
S+ NVE LD SVG+ G+R E F+Y
Sbjct: 206 SYGDNVEELDWSVGQIMKELDDLGLRNETFVY 237
>SB_47007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1174
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = +1
Query: 361 DRPRGISGNNKRLQKQRFYHIRSRKTGDGMEKQKRNSTVAERKTGTVEQVREEYDKIQHR 540
DR + I K L+ Q H R + T + + + V ERK G +V +++
Sbjct: 593 DRGKSIDKLEKELKDQEAKHNRQKNTLE--QTVAKMKEVMERKGGDANKVNARVAELEKE 650
Query: 541 IKENMK 558
+KE K
Sbjct: 651 LKEKTK 656
>SB_38212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1892
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +2
Query: 371 EELAEIINDFKNNVFTIS-EVEKLVMEWKNR-NETQQSLKEKQEQLNKCGK 517
+ L ++D NN+ + E+ E+K+R NE + LKE Q +L+ C K
Sbjct: 122 DRLKRELSDSDNNLQAVQDELNAKFQEYKDRENELKVKLKELQAKLSICAK 172
>SB_22720| Best HMM Match : KID (HMM E-Value=0.0014)
Length = 847
Score = 28.7 bits (61), Expect = 5.6
Identities = 23/97 (23%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Frame = +2
Query: 245 RIQTFNIETPTSDISQINLSTK----DIRSSGSIKTSKENSPLTGQEELAEIINDFKNNV 412
RIQT +E S++ Q+ S++ DIR ++ L +E+LAE+ + +
Sbjct: 278 RIQT--LEDRISELEQLLASSQELLEDIRQKDEKISTLNRIVLEREEKLAELEHGVEELE 335
Query: 413 FTISEVEKLVMEWKNRNETQQSLKEKQEQL-NKCGKN 520
+ E +KL + +++ ++L+++ ++L + C +N
Sbjct: 336 CAVEESQKLHQAIQQKDDKLKTLEDRLDELEDVCSEN 372
>SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1967
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = +1
Query: 361 DRPRGISGNNKRLQKQRFYHIRSRKTGDGMEKQKRNSTVAERKTGTVEQVREEYDKIQHR 540
DR + I K L+ Q H R + T + + + V ERK G +V +++
Sbjct: 1792 DRGKSIDKLEKELKDQEAKHNRQKNTLE--QTVAKMKEVMERKGGDANKVNARVAELEKE 1849
Query: 541 IKENMK 558
+KE K
Sbjct: 1850 LKEKTK 1855
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +1
Query: 430 RKTGDGMEKQKRNS--TVAERKTGTVEQVREEYDKIQHRIKENMKRPTPFERVKKMFSKN 603
RK G E++ ++ +RKT TV +E+ D + R+KE MK E+ K+ K
Sbjct: 859 RKVSSGGEERIDGPLMSIFKRKTSTVPSDKEKKDNEKARLKE-MKDKEKIEKEKREKDKR 917
Query: 604 KNKHHE 621
+ + E
Sbjct: 918 EREEKE 923
>SB_14703| Best HMM Match : Borrelia_orfA (HMM E-Value=0.14)
Length = 558
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = +1
Query: 361 DRPRGISGNNKRLQKQRFYHIRSRKTGDGMEKQKRNSTVAERKTGTVEQVREEYDKIQHR 540
DR + I K L+ Q H R + T + + + V ERK G +V +++
Sbjct: 209 DRGKSIDKLEKELKDQEAKHNRQKNTLE--QTVAKMKEVMERKGGDANKVNARVAELEKE 266
Query: 541 IKENMK 558
+KE K
Sbjct: 267 LKEKTK 272
>SB_8983| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 606
Score = 28.7 bits (61), Expect = 5.6
Identities = 21/71 (29%), Positives = 30/71 (42%)
Frame = +1
Query: 418 HIRSRKTGDGMEKQKRNSTVAERKTGTVEQVREEYDKIQHRIKENMKRPTPFERVKKMFS 597
HIRS+KT + N A +KT T + V E ++Q ++ K V K F
Sbjct: 67 HIRSKKTTQRGSELYLNRRKAPKKTKTTQTVEEA--RVQRVVEAATKVGGETRIVTKDFK 124
Query: 598 KNKNKHHESNT 630
K K N+
Sbjct: 125 SPKRKRRSCNS 135
>SB_5871| Best HMM Match : IBR (HMM E-Value=0.00018)
Length = 843
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 2 RKAISCVVQTSKSQRTTTVPKRIAVSRRHSGQD 100
+K + C V T KS ++ T P+R AVSR + ++
Sbjct: 193 KKRLVCHVPTEKSGKSITCPQRKAVSRSRAHRE 225
>SB_3290| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 326
Score = 28.7 bits (61), Expect = 5.6
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +1
Query: 376 ISGNNKRLQKQRFYHIRSRKT-GDGMEKQKRNSTVAERKTGTVEQVREEYDKIQHRIKEN 552
I N +R+Q+ + RKT D + R ER E+ E+D+++ + +E
Sbjct: 158 IQENTERVQELQGVVATDRKTIDDPNTSESRRQEARERN----EERLSEFDELERKNREL 213
Query: 553 MKRPTPFERVKKMFSK 600
R ER+K +F K
Sbjct: 214 ENRKPLRERIKAIFKK 229
>SB_45659| Best HMM Match : E_Pc_C (HMM E-Value=1.2)
Length = 1244
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 520 YDKIQHRIKENMKRPTPFERVKKMFSKNKNKHHESNTGTIEK 645
YDK + K+ KR ERV ++ K K K H+S +K
Sbjct: 309 YDKDDQKHKKPKKRHKSPERVVRLSHKKKKKKHKSKHSRKDK 350
>SB_26241| Best HMM Match : B1 (HMM E-Value=2.5)
Length = 155
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2
Query: 38 SQRTTTVPKRIAVSRRHSGQD 100
S RTTT K IAVSRR++ +D
Sbjct: 54 SGRTTTSAKHIAVSRRYNSKD 74
>SB_23786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 28.3 bits (60), Expect = 7.4
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 11/89 (12%)
Frame = +1
Query: 430 RKTGDGMEKQKRNSTVAERK----TGTVEQVREEYDKIQHRIK-----ENMKRPTPFERV 582
RK+ ++ KR RK T T+E REE + + R+K N + R
Sbjct: 95 RKSRQEIQTHKRTKNNKHRKAKKTTQTIEWRREEKQRRKPRVKTGKSDRNQQESWKKPRE 154
Query: 583 KKMFSKNKNKHHESN--TGTIEKRNGNTR 663
KK+ + +N +SN T ++ RNG R
Sbjct: 155 KKIELQRENLARKSNKTTNSVTCRNGRER 183
>SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2202
Score = 28.3 bits (60), Expect = 7.4
Identities = 23/89 (25%), Positives = 41/89 (46%)
Frame = +2
Query: 254 TFNIETPTSDISQINLSTKDIRSSGSIKTSKENSPLTGQEELAEIINDFKNNVFTISEVE 433
T + T + S+ +T S + + +K + GQ+EL +N + E
Sbjct: 647 TGGVNTGSGTTSESGTTTSGTTESRTKELAKNLAKEEGQKEL---LNTLAEKGVLNKQGE 703
Query: 434 KLVMEWKNRNETQQSLKEKQEQLNKCGKN 520
+V E KN+ E + + + KQE L K G++
Sbjct: 704 AVVNE-KNKQEGKATEENKQEVLKKLGES 731
>SB_47294| Best HMM Match : Vicilin_N (HMM E-Value=2.8)
Length = 262
Score = 28.3 bits (60), Expect = 7.4
Identities = 24/100 (24%), Positives = 36/100 (36%)
Frame = +1
Query: 352 QPFDRPRGISGNNKRLQKQRFYHIRSRKTGDGMEKQKRNSTVAERKTGTVEQVREEYDKI 531
Q F RPR S R +K R+RK + ++NS R ++ R
Sbjct: 63 QEFTRPRKNSQEFTRTRKNSQEFTRTRKNSQEFTRTRKNSQEFTRVRKNSQEFRRTCKNS 122
Query: 532 QHRIKENMKRPTPFERVKKMFSKNKNKHHESNTGTIEKRN 651
Q K N + F R +K + S T ++N
Sbjct: 123 QEFTK-NSQESQEFTRTRKNSQEFTRTRKNSQEFTRTRKN 161
>SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1126
Score = 28.3 bits (60), Expect = 7.4
Identities = 19/74 (25%), Positives = 33/74 (44%)
Frame = +2
Query: 275 TSDISQINLSTKDIRSSGSIKTSKENSPLTGQEELAEIINDFKNNVFTISEVEKLVMEWK 454
T+ + + S D S K ++ S + QEE E DF+ +V T E ++ + K
Sbjct: 210 TAKVDTTDNSFVDFEDEKSNKNKRKQSEII-QEEKVESSTDFETHVSTTPENQESAKKLK 268
Query: 455 NRNETQQSLKEKQE 496
+ Q+ + K E
Sbjct: 269 MSDTPQKEISPKVE 282
>SB_56618| Best HMM Match : DUF1213 (HMM E-Value=0.022)
Length = 1421
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = +1
Query: 391 KRLQKQRFYHIRSRKTGDGMEKQKRNSTVAERKTGTVEQVREEYDKIQHRIKENMK 558
+R ++Q ++ K E++ R + AER+ V++ REE K + ++E K
Sbjct: 1147 RREEEQAQEKLKDAKRKAREERESRRAAEAERRRLEVQKKREEKKKREEEMREKEK 1202
>SB_44875| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 529 IQHRIKENMKRPTPFERVKKMFSKNKNKHHESNTGTIEKRNGNTR 663
+QH+ K+ MK+ P R + S+ +N +H T + R GNTR
Sbjct: 5 VQHKEKKRMKKKIPLAR-DRTRSEEQNGNH---THGLPNRYGNTR 45
>SB_35998| Best HMM Match : SURF6 (HMM E-Value=4.8)
Length = 279
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/73 (23%), Positives = 30/73 (41%)
Frame = +1
Query: 433 KTGDGMEKQKRNSTVAERKTGTVEQVREEYDKIQHRIKENMKRPTPFERVKKMFSKNKNK 612
++GDG +K RK V +EE+D ++ +++ P R K + NK
Sbjct: 5 ESGDGEFVEKEEKEQDRRKRDIVSWDKEEFDGPRNMAARSVETPASIRREKIAKKASDNK 64
Query: 613 HHESNTGTIEKRN 651
E + +N
Sbjct: 65 PQEVTQQVGDSKN 77
>SB_34393| Best HMM Match : RVT_1 (HMM E-Value=2e-36)
Length = 1198
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +1
Query: 424 RSRKTGDGMEKQKRNSTVAERKTGTVEQVREEYDKIQHRIKENMK 558
R + +G + + N V ++ Q+RE+YD+ +HR+ E K
Sbjct: 1017 RRHRVAEGEKLAEDNDVVRRKEREHRRQMREDYDR-RHRVAEGEK 1060
>SB_9567| Best HMM Match : CASP_C (HMM E-Value=2.8e-07)
Length = 434
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 448 MEKQKRNSTVAERKTGTVEQVREEYDKIQHRIKE--NMKRPTPFERV 582
+EK + + AER+ VE +REE K QH ++E + KRP E +
Sbjct: 78 VEKSHQRALSAERQ---VEALREELAKAQHALQEAYDPKRPNMEEAI 121
>SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0)
Length = 442
Score = 27.9 bits (59), Expect = 9.8
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +1
Query: 391 KRLQKQRFYHIRSRKTGDGMEKQKRNSTVA-ERKTGTVEQVREEYDKIQHRIKENMKRPT 567
+RL+KQ + +K + +EK++R E+K E+ R++ ++I +I+E KR
Sbjct: 353 ERLEKQAE---KEKKEKERLEKKQREEKDRLEKKEKKEEEKRKKEEEINAKIEEKKKR-- 407
Query: 568 PFERVKKMFSKNKNKHHE 621
E KK + K K E
Sbjct: 408 --EEKKKQEEEEKMKKKE 423
>SB_13359| Best HMM Match : DMAP1 (HMM E-Value=0)
Length = 535
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +1
Query: 385 NNKRLQKQRFYHIRSRKTGDGMEKQKRN--STVAERKTGTVEQVREE 519
NN R +K+ +K GD E++K V +KT VEQ+ EE
Sbjct: 365 NNFRREKKPIKKKVPKKKGDAQEEKKLKMPGAVGTKKTKAVEQLLEE 411
>SB_11369| Best HMM Match : bZIP_2 (HMM E-Value=4.3)
Length = 206
Score = 27.9 bits (59), Expect = 9.8
Identities = 21/94 (22%), Positives = 39/94 (41%)
Frame = +1
Query: 376 ISGNNKRLQKQRFYHIRSRKTGDGMEKQKRNSTVAERKTGTVEQVREEYDKIQHRIKENM 555
I N +R+Q+ R R+T D + + A + E+ E D+++ +E
Sbjct: 104 IQENTERIQELRGVVATDRETIDDPNTSESSRQEARERN---EERLSEIDELERENRELE 160
Query: 556 KRPTPFERVKKMFSKNKNKHHESNTGTIEKRNGN 657
+ ER+K +F+K H G + G+
Sbjct: 161 NQKPLRERIKAIFTKYGFTRHRYRVGRSDDDRGH 194
>SB_8304| Best HMM Match : PLAT (HMM E-Value=0)
Length = 1182
Score = 27.9 bits (59), Expect = 9.8
Identities = 21/96 (21%), Positives = 42/96 (43%)
Frame = +1
Query: 358 FDRPRGISGNNKRLQKQRFYHIRSRKTGDGMEKQKRNSTVAERKTGTVEQVREEYDKIQH 537
FDR + G + + + + + T + + Q+ N T E +T TVE + +H
Sbjct: 781 FDRIK--DGERETIMIKTEEKVENEVTNEDEKYQRHNGTHTETRT-TVEVIHIAPMDDEH 837
Query: 538 RIKENMKRPTPFERVKKMFSKNKNKHHESNTGTIEK 645
R K++ + P E ++ + S + + G +K
Sbjct: 838 RSKDDDRHLDPSEVIQIVISDASDTEDDDEVGDRDK 873
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,565,781
Number of Sequences: 59808
Number of extensions: 420570
Number of successful extensions: 1694
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1684
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2131907602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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