Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0838
         (748 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g42580.1 68415.m05269 tetratricopeptide repeat (TPR)-containi...    29   4.3  
At2g35840.2 68415.m04401 sucrose-phosphatase 1 (SPP1) identical ...    28   7.6  
At2g35840.1 68415.m04400 sucrose-phosphatase 1 (SPP1) identical ...    28   7.6  
At1g51420.1 68414.m05788 sucrose-phosphatase, putative similar t...    27   10.0 

>At2g42580.1 68415.m05269 tetratricopeptide repeat (TPR)-containing
           protein contains Pfam profile PF00515 TPR Domain
          Length = 691

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 645 SGSVSGSLQATDRLMKELRDIYRSHS 722
           SGS SG    + ++ K L D Y+SHS
Sbjct: 68  SGSASGKPSVSSQMAKRLDDAYKSHS 93


>At2g35840.2 68415.m04401 sucrose-phosphatase 1 (SPP1) identical to
           sucrose-phosphatase (SPP1) [Arabidopsis thaliana]
           GI:11127757
          Length = 422

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +2

Query: 149 SVDELTCRFVGKNGKKYEIHANITETYPTTPPVWFEKV 262
           ++DEL      K GKK+ + A+      TTP  W  K+
Sbjct: 335 TIDELRKYHGDKQGKKFRVWADQVLATDTTPGTWIVKL 372


>At2g35840.1 68415.m04400 sucrose-phosphatase 1 (SPP1) identical to
           sucrose-phosphatase (SPP1) [Arabidopsis thaliana]
           GI:11127757
          Length = 422

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +2

Query: 149 SVDELTCRFVGKNGKKYEIHANITETYPTTPPVWFEKV 262
           ++DEL      K GKK+ + A+      TTP  W  K+
Sbjct: 335 TIDELRKYHGDKQGKKFRVWADQVLATDTTPGTWIVKL 372


>At1g51420.1 68414.m05788 sucrose-phosphatase, putative similar to
           sucrose-phosphatase (SPP1) [Arabidopsis thaliana]
           GI:11127757; contains Pfam profile PF05116:
           Sucrose-6F-phosphate phosphohydrolase
          Length = 423

 Score = 27.5 bits (58), Expect = 10.0
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +2

Query: 149 SVDELTCRFVGKNGKKYEIHANITETYPTTPPVWFEKV 262
           ++DEL   +  K GKK+ +  +      TTP  W  K+
Sbjct: 336 TIDELGKYYGDKKGKKFRVWTDQVLATDTTPGTWIVKL 373


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,757,205
Number of Sequences: 28952
Number of extensions: 309867
Number of successful extensions: 827
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1653386488
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)