Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0834
(660 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g22370.1 68418.m02610 ATP-binding family protein contains Pfa... 74 1e-13
At4g12790.2 68417.m02007 ATP-binding family protein contains Pfa... 64 8e-11
At4g12790.1 68417.m02006 ATP-binding family protein contains Pfa... 64 8e-11
At4g24710.1 68417.m03536 AAA-type ATPase family protein similar ... 36 0.032
At3g47780.1 68416.m05205 ABC transporter family protein transpor... 34 0.096
At5g47040.1 68418.m05797 Lon protease homolog 1, mitochondrial (... 32 0.29
At5g66005.2 68418.m08311 Expressed protein 32 0.39
At4g21800.2 68417.m03154 ATP-binding family protein contains Pfa... 32 0.39
At4g21800.1 68417.m03153 ATP-binding family protein contains Pfa... 32 0.39
At5g61740.1 68418.m07747 ABC transporter family protein ABC fami... 31 0.51
At5g61700.1 68418.m07741 ABC transporter family protein ABC fami... 31 0.51
At3g47750.1 68416.m05202 ABC transporter family protein probable... 31 0.90
At3g28570.1 68416.m03567 AAA-type ATPase family protein contains... 30 1.6
At1g54350.1 68414.m06196 ABC transporter family protein similar ... 30 1.6
At5g40010.1 68418.m04852 AAA-type ATPase family protein contains... 29 2.1
At5g03940.1 68418.m00374 signal recognition particle 54 kDa prot... 29 2.1
At5g01310.1 68418.m00043 basic helix-loop-helix (bHLH) family pr... 29 2.1
At4g15236.1 68417.m02335 ABC transporter family protein similar ... 29 2.1
At3g47790.1 68416.m05206 ABC transporter family protein contains... 29 2.1
At3g47770.1 68416.m05204 ABC transporter family protein AbcA, Di... 29 2.1
At3g47760.1 68416.m05203 ABC transporter family protein probable... 29 2.1
At3g47740.1 68416.m05201 ABC transporter family protein ATP bind... 29 2.1
At3g10420.2 68416.m01250 sporulation protein-related similar to ... 29 2.1
At3g10420.1 68416.m01249 sporulation protein-related similar to ... 29 2.1
At4g36580.1 68417.m05193 AAA-type ATPase family protein contains... 29 2.7
At4g04910.1 68417.m00714 AAA-type ATPase family protein similar ... 29 2.7
At3g28610.1 68416.m03571 AAA-type ATPase family protein contains... 29 3.6
At3g28580.1 68416.m03568 AAA-type ATPase family protein contains... 29 3.6
At1g73170.1 68414.m08466 expressed protein 29 3.6
At5g40000.1 68418.m04851 AAA-type ATPase family protein BCS1 nuc... 28 4.8
At3g28540.1 68416.m03564 AAA-type ATPase family protein contains... 28 4.8
At2g37010.1 68415.m04539 ABC transporter family protein contains... 28 4.8
At5g66910.1 68418.m08434 disease resistance protein (CC-NBS-LRR ... 28 6.3
At5g17760.2 68418.m02083 AAA-type ATPase family protein contains... 28 6.3
At5g17760.1 68418.m02082 AAA-type ATPase family protein contains... 28 6.3
At5g17740.1 68418.m02080 AAA-type ATPase family protein h-bcs1, ... 28 6.3
At5g17730.1 68418.m02079 AAA-type ATPase family protein contains... 28 6.3
At3g16340.1 68416.m02066 ABC transporter family protein similar ... 28 6.3
At2g28560.1 68415.m03470 expressed protein 28 6.3
At2g18193.1 68415.m02117 AAA-type ATPase family protein contains... 28 6.3
At2g18190.1 68415.m02116 AAA-type ATPase family protein contains... 28 6.3
At1g26190.1 68414.m03196 phosphoribulokinase/uridine kinase fami... 28 6.3
At4g15215.1 68417.m02332 ABC transporter family protein similar ... 27 8.4
At2g37280.1 68415.m04573 ABC transporter family protein similar ... 27 8.4
At2g26910.1 68415.m03228 ABC transporter family protein similar ... 27 8.4
At1g07650.1 68414.m00821 leucine-rich repeat transmembrane prote... 27 8.4
>At5g22370.1 68418.m02610 ATP-binding family protein contains Pfam
domain, PF03029: Conserved hypothetical ATP binding
protein
Length = 291
Score = 73.7 bits (173), Expect = 1e-13
Identities = 31/53 (58%), Positives = 41/53 (77%)
Frame = +1
Query: 349 YGQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRE 507
+GQ+V+GPPG+GKTTYC MS L +GR+V IVNLDPAND + Y+ ++I E
Sbjct: 3 FGQVVIGPPGSGKTTYCNGMSQFLSLMGRKVAIVNLDPANDALPYECGVNIEE 55
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/52 (51%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = +3
Query: 507 VIVLEEVMEQIDLGPNGALLYCMAYLESNLDWLLNQLHG-DNGTTFLFDLPG 659
+I LE+VM + LGPNG L+YCM YLE N+DWL ++L LFD PG
Sbjct: 56 LIKLEDVMSEHSLGPNGGLVYCMEYLEKNIDWLESKLKPLLKDHYILFDFPG 107
>At4g12790.2 68417.m02007 ATP-binding family protein contains Pfam
domain, PF03029: Conserved hypothetical ATP binding
protein
Length = 271
Score = 64.1 bits (149), Expect = 8e-11
Identities = 27/53 (50%), Positives = 38/53 (71%)
Frame = +1
Query: 349 YGQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRE 507
Y QLV+GP G+GK+TYC + + +T+GR + +VNLDPA + NY +DIRE
Sbjct: 3 YAQLVIGPAGSGKSTYCSSLYEHCETIGRTMHVVNLDPAAEIFNYPVAMDIRE 55
Score = 57.2 bits (132), Expect = 9e-09
Identities = 28/53 (52%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Frame = +3
Query: 507 VIVLEEVMEQIDLGPNGALLYCMAYLESNL-DWLLNQLHGDNGTTFL-FDLPG 659
+I LE+VME + LGPNGAL+YCM YLE +L DW+ +L +L FD PG
Sbjct: 56 LISLEDVMEDLKLGPNGALMYCMEYLEDSLHDWVDEELENYRDDDYLIFDCPG 108
>At4g12790.1 68417.m02006 ATP-binding family protein contains Pfam
domain, PF03029: Conserved hypothetical ATP binding
protein
Length = 271
Score = 64.1 bits (149), Expect = 8e-11
Identities = 27/53 (50%), Positives = 38/53 (71%)
Frame = +1
Query: 349 YGQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRE 507
Y QLV+GP G+GK+TYC + + +T+GR + +VNLDPA + NY +DIRE
Sbjct: 3 YAQLVIGPAGSGKSTYCSSLYEHCETIGRTMHVVNLDPAAEIFNYPVAMDIRE 55
Score = 57.2 bits (132), Expect = 9e-09
Identities = 28/53 (52%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Frame = +3
Query: 507 VIVLEEVMEQIDLGPNGALLYCMAYLESNL-DWLLNQLHGDNGTTFL-FDLPG 659
+I LE+VME + LGPNGAL+YCM YLE +L DW+ +L +L FD PG
Sbjct: 56 LISLEDVMEDLKLGPNGALMYCMEYLEDSLHDWVDEELENYRDDDYLIFDCPG 108
>At4g24710.1 68417.m03536 AAA-type ATPase family protein similar to
HPV16 E1 protein binding protein [Homo sapiens]
gi|2232019|gb|AAB64095; contains Pfam domain, PF00004:
ATPase, AAA family ('A'TPases 'A'ssociated with diverse
cellular 'A'ctivities)
Length = 467
Score = 35.5 bits (78), Expect = 0.032
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Frame = +1
Query: 271 YHFGLQKR--RYRMSAM--TNKRFKPTQTFYGQLVL--GPPGAGKTTYCIKMSDML 420
Y GL++R RY SA+ T K P + +++L GPPG GKT+ C ++ L
Sbjct: 171 YESGLKQRLLRYAASALLFTQKGVNPNLVSWNRIILLHGPPGTGKTSLCKALAQKL 226
>At3g47780.1 68416.m05205 ABC transporter family protein transport
protein ABC-C, Homo sapiens, PIR2:S71363
Length = 935
Score = 33.9 bits (74), Expect = 0.096
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 361 VLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPAND 471
+LGP GAGKT++ M+ +LK ++ LD ND
Sbjct: 649 MLGPNGAGKTSFINMMTGLLKPTSGTALVQGLDICND 685
>At5g47040.1 68418.m05797 Lon protease homolog 1, mitochondrial
(LON) identical to Lon protease homolog 1 mitochondrial
precursor SP:O64948 from [Arabidopsis thaliana]
Length = 888
Score = 32.3 bits (70), Expect = 0.29
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 274 HFGLQKRRYRM-SAMTNKRFKPTQTFYGQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIV 450
H+GL K + R+ + ++ KP +GPPG GKT+ S + LGR+ + +
Sbjct: 376 HYGLAKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLA---SSIAAALGRKFVRL 432
Query: 451 NLDPAND 471
+L D
Sbjct: 433 SLGGVKD 439
>At5g66005.2 68418.m08311 Expressed protein
Length = 164
Score = 31.9 bits (69), Expect = 0.39
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 358 LVLGPPGAGKTTYCIKMSDMLK 423
LV GPPG GKTT +++ DM++
Sbjct: 9 LVTGPPGVGKTTLIMRVLDMMR 30
>At4g21800.2 68417.m03154 ATP-binding family protein contains Pfam
domain, PF03029: Conserved hypothetical ATP binding
protein
Length = 379
Score = 31.9 bits (69), Expect = 0.39
Identities = 17/56 (30%), Positives = 33/56 (58%)
Frame = +1
Query: 358 LVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRE*LFWKK 525
+V+G G+GKT++ ++ +VNLDPA ++ + +IDIR+ + +K+
Sbjct: 45 IVVGMAGSGKTSFLHRLVCHTFDSKSHGYVVNLDPAVMSLPFGANIDIRDTVKYKE 100
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 501 KGVIVLEEVMEQIDLGPNGALLYCMAYLESNLDWLLN--QLHGDNGTTFLFDLPG 659
+ + +EVM+Q +LGPNG +L + + D +++ + D L D PG
Sbjct: 93 RDTVKYKEVMKQYNLGPNGGILTSLNLFATKFDEVVSVIEKRADQLDYVLVDTPG 147
>At4g21800.1 68417.m03153 ATP-binding family protein contains Pfam
domain, PF03029: Conserved hypothetical ATP binding
protein
Length = 379
Score = 31.9 bits (69), Expect = 0.39
Identities = 17/56 (30%), Positives = 33/56 (58%)
Frame = +1
Query: 358 LVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRE*LFWKK 525
+V+G G+GKT++ ++ +VNLDPA ++ + +IDIR+ + +K+
Sbjct: 45 IVVGMAGSGKTSFLHRLVCHTFDSKSHGYVVNLDPAVMSLPFGANIDIRDTVKYKE 100
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 501 KGVIVLEEVMEQIDLGPNGALLYCMAYLESNLDWLLN--QLHGDNGTTFLFDLPG 659
+ + +EVM+Q +LGPNG +L + + D +++ + D L D PG
Sbjct: 93 RDTVKYKEVMKQYNLGPNGGILTSLNLFATKFDEVVSVIEKRADQLDYVLVDTPG 147
>At5g61740.1 68418.m07747 ABC transporter family protein ABC family
transporter, Entamoeba histolytica, TREMBL:EH058
Length = 848
Score = 31.5 bits (68), Expect = 0.51
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 361 VLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPAND 471
+LGP GAGKT++ M+ +LK ++ LD D
Sbjct: 562 MLGPNGAGKTSFINMMTGLLKPTSGTALVQGLDICKD 598
>At5g61700.1 68418.m07741 ABC transporter family protein ABC family
transporter, Entamoeba histolytica, EMBL:EH058
Length = 888
Score = 31.5 bits (68), Expect = 0.51
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 361 VLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPAND 471
+LGP GAGKT++ M+ +LK ++ LD D
Sbjct: 602 MLGPNGAGKTSFISMMTGLLKPSSGTALVQGLDICKD 638
>At3g47750.1 68416.m05202 ABC transporter family protein probable
transport protein ABC-C, Homo sapiens, PIR2:S71363
Length = 944
Score = 30.7 bits (66), Expect = 0.90
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 361 VLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPAND 471
+LGP GAGKT++ M+ ++K ++ +LD D
Sbjct: 658 MLGPNGAGKTSFINMMTGLVKPTSGTALVESLDICQD 694
>At3g28570.1 68416.m03567 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 451
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 352 GQLVLGPPGAGKTTYCIKMSDMLK 423
G L+ GPPG GK+T M++++K
Sbjct: 238 GYLLYGPPGTGKSTMIAAMANLMK 261
>At1g54350.1 68414.m06196 ABC transporter family protein similar to
hypothetical ABC transporter ATP-binding protein
GI:9955395 from [Microcystis aeruginosa]
Length = 706
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 358 LVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPD 492
L++GP G+GKT+ M+ + ++ G+ I LDP D K D
Sbjct: 461 LIMGPSGSGKTSLLRAMAGLWRS-GKGKITFYLDPEVDFTQEKSD 504
>At5g40010.1 68418.m04852 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 514
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 352 GQLVLGPPGAGKTTYCIKMSDMLK 423
G L+ GPPG GK+T M+++L+
Sbjct: 245 GYLLFGPPGTGKSTMIAAMANLLE 268
>At5g03940.1 68418.m00374 signal recognition particle 54 kDa
protein, chloroplast / 54 chloroplast protein / SRP54
(FFC) identical to Swiss-Prot:P37107 signal recognition
particle 54 kDa protein, chloroplast precursor (SRP54)
(54 chloroplast protein) (54CP) (FFC) [Arabidopsis
thaliana]
Length = 564
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 358 LVLGPPGAGKTTYCIKMSDMLKTLGRQVIIV 450
L+ G G GKTT C K++ LK G+ +++
Sbjct: 180 LLAGLQGVGKTTVCAKLACYLKKQGKSCMLI 210
>At5g01310.1 68418.m00043 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain, weak hit to PF01661: Appr-1-p
processing enzyme family
Length = 912
Score = 29.5 bits (63), Expect = 2.1
Identities = 9/14 (64%), Positives = 14/14 (100%)
Frame = +1
Query: 358 LVLGPPGAGKTTYC 399
L++GPPG+GK+T+C
Sbjct: 231 LLIGPPGSGKSTFC 244
>At4g15236.1 68417.m02335 ABC transporter family protein similar to
pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, ABC1 protein [Nicotiana
plumbaginifolia] GI:14331118; contains Pfam profile
PF00005: ABC transporter
Length = 1388
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 358 LVLGPPGAGKTTYCIKMSDML 420
L+LGPPG GKTT + +S L
Sbjct: 166 LLLGPPGCGKTTLLLALSGRL 186
>At3g47790.1 68416.m05206 ABC transporter family protein contains
Pfam domain, PF00005: ABC transporter
Length = 901
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +1
Query: 361 VLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDI--RE*LFWKK 525
+LGP GAGKT++ M+ ++K + LD D I + + L W+K
Sbjct: 622 MLGPNGAGKTSFINMMTGIIKPSSGTAFVQGLDILTDMDRIYTTIGVCPQHDLLWEK 678
>At3g47770.1 68416.m05204 ABC transporter family protein AbcA,
Dictyostelium discoideum, U66526
Length = 900
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 361 VLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPAND 471
+LGP GAGKT++ M+ ++K + LD D
Sbjct: 620 MLGPNGAGKTSFINMMTGLVKPSSGSAFVQGLDICKD 656
>At3g47760.1 68416.m05203 ABC transporter family protein probable
transport protein ABC-C, Homo sapiens, PIR2:S71363
Length = 872
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 361 VLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPAND 471
+LGP GAGKT++ M+ ++K + LD D
Sbjct: 586 MLGPNGAGKTSFINMMTGLMKPTSGAAFVHGLDICKD 622
>At3g47740.1 68416.m05201 ABC transporter family protein ATP binding
cassette transporter ABC1, Homo sapiens, PIR2:A54774
Length = 947
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 361 VLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPAND 471
+LGP GAGKT++ M+ ++K + LD D
Sbjct: 661 MLGPNGAGKTSFINMMTGLVKPTSGAAFVQGLDICKD 697
>At3g10420.2 68416.m01250 sporulation protein-related similar to
hypothetical proteins: GB:P51281 [Chloroplast Porphyra
purpurea], GB:BAA16982 [Synechocystis sp], GB:P49540
[Odontella sinensis], GB:AAB82669 [Chloroplast Cyanidium
caldarium]; similar to stage III sporulation protein AA
(GI:18145497) [Clostridium perfringens str. 13]; similar
to stage III sporulation protein AA (mutants block
sporulation after engulfment) (GI:22777578)
[Oceanobacillus iheyensis]
Length = 684
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +1
Query: 358 LVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPAND 471
LV+G PG GKTT +++ ML R+ +++ +D +N+
Sbjct: 217 LVIGSPGVGKTTLIREIARMLADEHRKRVVI-VDTSNE 253
>At3g10420.1 68416.m01249 sporulation protein-related similar to
hypothetical proteins: GB:P51281 [Chloroplast Porphyra
purpurea], GB:BAA16982 [Synechocystis sp], GB:P49540
[Odontella sinensis], GB:AAB82669 [Chloroplast Cyanidium
caldarium]; similar to stage III sporulation protein AA
(GI:18145497) [Clostridium perfringens str. 13]; similar
to stage III sporulation protein AA (mutants block
sporulation after engulfment) (GI:22777578)
[Oceanobacillus iheyensis]
Length = 547
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +1
Query: 358 LVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPAND 471
LV+G PG GKTT +++ ML R+ +++ +D +N+
Sbjct: 217 LVIGSPGVGKTTLIREIARMLADEHRKRVVI-VDTSNE 253
>At4g36580.1 68417.m05193 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 620
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +1
Query: 274 HFGLQKRRYRMSAMTNKRFKPTQTFYGQLVLGPPGAGKT 390
H L+KR R++ T F + GPPG GKT
Sbjct: 346 HTSLKKRIERLARATANTKSHQAPFRNMMFYGPPGTGKT 384
>At4g04910.1 68417.m00714 AAA-type ATPase family protein similar to
SP|P18708 Vesicular-fusion protein NSF
(N-ethylmaleimide-sensitive fusion protein)
(NEM-sensitive fusion protein) {Cricetulus griseus};
contains Pfam profiles PF00004: ATPase AAA family,
PF02359: Cell division protein 48 (CDC48) N-terminal
domain; contains non-consensus AT-AC splice sites at
intron 2
Length = 742
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +1
Query: 352 GQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVN 453
G L+ GPPG GKT ++ ML G+ IVN
Sbjct: 252 GMLLFGPPGTGKTLMARQIGKMLN--GKDPKIVN 283
>At3g28610.1 68416.m03571 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 473
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 352 GQLVLGPPGAGKTTYCIKMSDML 420
G L+ GPPG GK+T M+++L
Sbjct: 238 GYLLYGPPGTGKSTMIAAMANLL 260
>At3g28580.1 68416.m03568 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 500
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 352 GQLVLGPPGAGKTTYCIKMSDMLK 423
G L+ GPPG GK+T M++ L+
Sbjct: 242 GYLLFGPPGTGKSTMIAAMANFLE 265
>At1g73170.1 68414.m08466 expressed protein
Length = 666
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 358 LVLGPPGAGKTTYCIKMSDML-KTLGRQVIIVN 453
L++GPPG GKTT +++ ML ++V+IV+
Sbjct: 201 LLIGPPGVGKTTMIREVARMLGNDYEKRVMIVD 233
>At5g40000.1 68418.m04851 AAA-type ATPase family protein BCS1
nuclear gene encoding mitochondrial protein - Homo
sapiens, EMBL:AF026849 contains Pfam profile: ATPase
family PF00004
Length = 470
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 352 GQLVLGPPGAGKTTYCIKMSDML 420
G L+ GPPG GK+T M+++L
Sbjct: 243 GYLLYGPPGTGKSTMISAMANLL 265
>At3g28540.1 68416.m03564 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 510
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 352 GQLVLGPPGAGKTTYCIKMSDMLK 423
G L+ GPPG GK+T M++ L+
Sbjct: 241 GYLLFGPPGTGKSTMISAMANFLE 264
>At2g37010.1 68415.m04539 ABC transporter family protein contains
ABC transporter domain, Pfam:PF00005
Length = 1063
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +1
Query: 361 VLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMN-YK 486
V+GP GAGKTT+ ++ R +I+ ++ ND++N YK
Sbjct: 497 VMGPSGAGKTTFLSALAGKATGCTRTGLIL-INGRNDSINSYK 538
>At5g66910.1 68418.m08434 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 815
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1
Query: 358 LVLGPPGAGKTTYCIKMSD 414
+V GPPG GKTT K+ D
Sbjct: 193 VVSGPPGCGKTTLVTKLCD 211
>At5g17760.2 68418.m02083 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 341
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 352 GQLVLGPPGAGKTTYCIKMSDMLK 423
G L+ GPPG GK++ M++ LK
Sbjct: 255 GYLLYGPPGTGKSSLVAAMANYLK 278
>At5g17760.1 68418.m02082 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 505
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 352 GQLVLGPPGAGKTTYCIKMSDMLK 423
G L+ GPPG GK++ M++ LK
Sbjct: 255 GYLLYGPPGTGKSSLVAAMANYLK 278
>At5g17740.1 68418.m02080 AAA-type ATPase family protein h-bcs1,
Homo sapiens, EMBL:AF026849 h-bcs1, Homo sapiens,
EMBL:AF026849 h-bcs1, Homo sapiens, EMBL:AF026849
contains Pfam profile: ATPase family PF00004
gene_id:K17E7.100 contains Pfam profile: ATPase family
PF00004
Length = 533
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 352 GQLVLGPPGAGKTTYCIKMSDMLK 423
G L+ GPPG GK++ M++ LK
Sbjct: 247 GYLLYGPPGTGKSSLVAAMANYLK 270
>At5g17730.1 68418.m02079 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 470
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 352 GQLVLGPPGAGKTTYCIKMSDMLK 423
G L+ GPPG GKT+ +++ LK
Sbjct: 247 GYLLYGPPGTGKTSLVAAIANYLK 270
>At3g16340.1 68416.m02066 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]; contains Pfam profile: PF00005 ABC
transporter
Length = 1416
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
Frame = +1
Query: 358 LVLGPPGAGKTTYCI----KMSDMLKTLGR 435
L+LGPP +GKTT + K+ LK GR
Sbjct: 177 LLLGPPSSGKTTLLLALAGKLDQSLKVTGR 206
>At2g28560.1 68415.m03470 expressed protein
Length = 320
Score = 27.9 bits (59), Expect = 6.3
Identities = 8/17 (47%), Positives = 15/17 (88%)
Frame = +1
Query: 361 VLGPPGAGKTTYCIKMS 411
++GPPG GK+ +C+K++
Sbjct: 76 LVGPPGIGKSQFCMKLA 92
>At2g18193.1 68415.m02117 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 495
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 352 GQLVLGPPGAGKTTYCIKMSDMLK 423
G L+ GPPG GK++ M++ LK
Sbjct: 245 GYLLYGPPGTGKSSLIAAMANYLK 268
>At2g18190.1 68415.m02116 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 494
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 352 GQLVLGPPGAGKTTYCIKMSDMLK 423
G L+ GPPG GK++ M++ LK
Sbjct: 246 GYLLYGPPGTGKSSLIAAMANYLK 269
>At1g26190.1 68414.m03196 phosphoribulokinase/uridine kinase family
protein weak similarity to SP|Q59190 Uridine kinase (EC
2.7.1.48) (Uridine monophosphokinase) (Cytidine
monophosphokinase) {Borrelia burgdorferi}; contains Pfam
profile PF00485: Phosphoribulokinase / Uridine kinase
family
Length = 674
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +1
Query: 361 VLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDT 474
V GP GAGKT + K+ + L + V ++++D ND+
Sbjct: 70 VAGPSGAGKTVFTEKILNFLPS----VAVISMDNYNDS 103
>At4g15215.1 68417.m02332 ABC transporter family protein similar to
PDR5-like ABC transporter [Spirodela polyrhiza]
GI:1514643; contains Pfam profile PF00005: ABC
transporter
Length = 1390
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 358 LVLGPPGAGKTTYCIKMSDML 420
L+LGPPG GKTT +S L
Sbjct: 168 LLLGPPGCGKTTLLQALSGRL 188
>At2g37280.1 68415.m04573 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1413
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 358 LVLGPPGAGKTTYCIKMSDMLK 423
L+LGPPG GKTT +S L+
Sbjct: 169 LLLGPPGCGKTTLLKALSGNLE 190
>At2g26910.1 68415.m03228 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1420
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 358 LVLGPPGAGKTTYCIKMSDMLKT 426
L+LGPP +GKTT + ++ L T
Sbjct: 165 LLLGPPSSGKTTLLLALAGRLGT 187
>At1g07650.1 68414.m00821 leucine-rich repeat transmembrane protein
kinase, putative similar to GB:AAC50043 from
[Arabidopsis thaliana] (Plant Mol. Biol. 37 (4), 587-596
(1998))
Length = 1014
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +3
Query: 69 FLEKLYFLDYIVILTVLN*TNLNFDDCGEEHQAAARFLAETVDILSK 209
+L ++YF+ IV+ T++ L F D + H+A R L E L K
Sbjct: 3 YLHRIYFI--IVLFTLIFHGRLGFSDNNKLHEAEVRALKEIGKKLGK 47
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,274,595
Number of Sequences: 28952
Number of extensions: 262457
Number of successful extensions: 856
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1383534864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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