Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0832
(730 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 161 6e-40
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 139 2e-33
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 75 6e-14
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 74 8e-14
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 73 1e-13
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 67 1e-11
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 65 5e-11
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 64 1e-10
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 63 2e-10
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 63 2e-10
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 63 2e-10
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 63 2e-10
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 63 2e-10
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 63 2e-10
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 63 2e-10
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 62 3e-10
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 62 3e-10
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 62 3e-10
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 62 4e-10
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 62 5e-10
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 62 5e-10
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 61 6e-10
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 61 8e-10
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 61 8e-10
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 60 1e-09
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 60 2e-09
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 60 2e-09
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 60 2e-09
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 60 2e-09
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 59 3e-09
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 59 3e-09
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 59 3e-09
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 58 5e-09
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 58 5e-09
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 58 8e-09
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 58 8e-09
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 57 1e-08
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 56 2e-08
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 56 2e-08
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 56 3e-08
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 56 3e-08
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 56 3e-08
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 55 4e-08
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 55 4e-08
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 55 6e-08
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 54 1e-07
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 54 1e-07
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 53 2e-07
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 53 2e-07
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 53 2e-07
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 53 2e-07
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 53 2e-07
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 53 2e-07
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 52 3e-07
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 52 4e-07
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 52 5e-07
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 52 5e-07
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 52 5e-07
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 52 5e-07
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 51 7e-07
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 51 9e-07
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 50 1e-06
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 50 1e-06
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 50 2e-06
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 50 2e-06
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 49 3e-06
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 49 3e-06
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 49 3e-06
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 49 4e-06
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 49 4e-06
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 49 4e-06
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 49 4e-06
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 48 5e-06
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 48 5e-06
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 48 5e-06
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 48 5e-06
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 48 5e-06
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 48 5e-06
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 48 5e-06
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 48 5e-06
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 48 6e-06
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 48 6e-06
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 48 8e-06
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 47 1e-05
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 47 1e-05
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 47 1e-05
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 46 2e-05
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 46 2e-05
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 46 2e-05
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 46 2e-05
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 46 2e-05
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 46 2e-05
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 46 2e-05
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 46 3e-05
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 46 3e-05
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 45 4e-05
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 45 4e-05
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 45 4e-05
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 45 6e-05
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 45 6e-05
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 45 6e-05
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 45 6e-05
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 44 1e-04
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 44 1e-04
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 44 1e-04
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 44 1e-04
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 44 1e-04
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 44 1e-04
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 44 1e-04
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 44 1e-04
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 43 2e-04
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 43 2e-04
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 43 2e-04
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 43 2e-04
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 43 2e-04
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 43 2e-04
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 43 2e-04
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 42 3e-04
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 42 3e-04
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 42 3e-04
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 42 3e-04
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 42 3e-04
At4g21530.1 68417.m03111 transducin family protein / WD-40 repea... 42 4e-04
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 42 4e-04
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 42 4e-04
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 42 4e-04
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 42 6e-04
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 42 6e-04
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 41 7e-04
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 41 7e-04
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 41 7e-04
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 41 0.001
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 41 0.001
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 41 0.001
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 41 0.001
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 40 0.001
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 40 0.001
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 40 0.001
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 40 0.002
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 40 0.002
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 40 0.002
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 40 0.002
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 40 0.002
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 40 0.002
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 40 0.002
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 39 0.003
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 39 0.003
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 39 0.003
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 39 0.003
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 39 0.003
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 39 0.004
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 39 0.004
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 39 0.004
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 39 0.004
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 39 0.004
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 38 0.005
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 38 0.005
At2g34260.2 68415.m04192 transducin family protein / WD-40 repea... 38 0.005
At2g34260.1 68415.m04191 transducin family protein / WD-40 repea... 38 0.005
At2g31300.1 68415.m03821 transducin family protein / WD-40 repea... 38 0.005
At2g30910.2 68415.m03768 transducin family protein / WD-40 repea... 38 0.005
At2g30910.1 68415.m03767 transducin family protein / WD-40 repea... 38 0.005
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 38 0.005
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 38 0.007
At3g56900.1 68416.m06329 aladin-related / adracalin-related weak... 38 0.007
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 38 0.007
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 38 0.007
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 38 0.009
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 38 0.009
At5g52250.1 68418.m06485 transducin family protein / WD-40 repea... 38 0.009
At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3 ... 38 0.009
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 38 0.009
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 37 0.012
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 37 0.012
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 37 0.012
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 37 0.016
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 37 0.016
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 37 0.016
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 36 0.021
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 36 0.021
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 36 0.021
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 36 0.021
At4g34280.1 68417.m04873 transducin family protein / WD-40 repea... 36 0.028
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 36 0.028
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 36 0.028
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 36 0.028
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 36 0.036
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 36 0.036
At4g21520.1 68417.m03110 transducin family protein / WD-40 repea... 36 0.036
At2g47790.1 68415.m05965 transducin family protein / WD-40 repea... 36 0.036
At1g80710.1 68414.m09470 transducin family protein / WD-40 repea... 35 0.048
At5g45760.2 68418.m05626 transducin family protein / WD-40 repea... 35 0.064
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 35 0.064
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 35 0.064
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 34 0.084
At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p pro... 34 0.11
At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p pro... 34 0.11
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 34 0.11
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 33 0.15
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 33 0.15
At1g76260.1 68414.m08855 transducin family protein / WD-40 repea... 33 0.15
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 33 0.19
At5g14050.1 68418.m01644 transducin family protein / WD-40 repea... 33 0.19
At4g00800.1 68417.m00110 expressed protein contains 1 WD-40 repe... 33 0.19
At3g49400.1 68416.m05400 transducin family protein / WD-40 repea... 33 0.19
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 33 0.19
At3g52190.1 68416.m05731 transducin family protein / WD-40 repea... 33 0.26
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 33 0.26
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 32 0.34
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 32 0.34
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 32 0.34
At3g26480.1 68416.m03301 transducin family protein / WD-40 repea... 32 0.45
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 32 0.45
At5g05150.1 68418.m00547 transport protein-related contains 2 WD... 31 0.59
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 31 0.59
At3g13300.2 68416.m01675 transducin family protein / WD-40 repea... 31 0.78
At3g13300.1 68416.m01674 transducin family protein / WD-40 repea... 31 0.78
At2g25420.1 68415.m03045 transducin family protein / WD-40 repea... 31 0.78
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 31 0.78
At1g03380.1 68414.m00317 expressed protein 31 0.78
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 31 1.0
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 31 1.0
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 31 1.0
At5g54730.1 68418.m06815 expressed protein 30 1.4
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 30 1.4
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 30 1.4
At5g12920.1 68418.m01482 expressed protein contains 3 weak WD-40... 30 1.4
At4g13310.2 68417.m02080 cytochrome P450 71A20, putative (CYP71A... 30 1.4
At4g13310.1 68417.m02081 cytochrome P450 71A20, putative (CYP71A... 30 1.4
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 30 1.4
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 30 1.4
At4g33400.1 68417.m04747 dem protein-related / defective embryo ... 30 1.8
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 30 1.8
At5g07590.1 68418.m00870 WD-40 repeat protein family contains 3 ... 29 2.4
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 29 2.4
At3g52030.1 68416.m05707 F-box family protein / WD-40 repeat fam... 29 2.4
At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,... 29 2.4
At3g26640.1 68416.m03329 transducin family protein / WD-40 repea... 29 3.2
At3g08850.1 68416.m01029 transducin family protein / WD-40 repea... 29 3.2
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 29 3.2
At1g49610.1 68414.m05562 F-box family protein contains F-box dom... 29 3.2
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 29 4.2
At1g54710.1 68414.m06237 expressed protein contains 3 WD-40 repe... 29 4.2
At1g08190.1 68414.m00905 vacuolar assembly protein, putative (VP... 29 4.2
At1g12910.1 68414.m01499 flower pigmentation protein (AN11) cont... 28 5.5
At4g11270.1 68417.m01823 transducin family protein / WD-40 repea... 28 7.3
At3g20620.1 68416.m02609 F-box family protein-related contains w... 28 7.3
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 28 7.3
At3g05620.1 68416.m00624 pectinesterase family protein contains ... 28 7.3
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 28 7.3
At1g27470.1 68414.m03349 transducin-related / WD-40 repeat prote... 28 7.3
At3g29635.1 68416.m03729 transferase family protein similar to a... 27 9.6
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 161 bits (390), Expect = 6e-40
Identities = 71/90 (78%), Positives = 79/90 (87%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
IWDV TGKCLK LPAHSDPV+AV FNRDGSLIVSSSYDGLCRIWD+ +G C+KTLIDD+N
Sbjct: 139 IWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDEN 198
Query: 437 PPVSFVKFSPNGKYILAATLDNTLNYGTIA 526
PPVSFV+FSPNGK+IL TLDNTL I+
Sbjct: 199 PPVSFVRFSPNGKFILVGTLDNTLRLWNIS 228
Score = 115 bits (276), Expect = 4e-26
Identities = 50/70 (71%), Positives = 62/70 (88%)
Frame = +3
Query: 45 SGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNL 224
+GH+ GISDVA+SSD+R IVSASDDKTLK+W++ +G +KTL GH+NY FC NFNPQSN+
Sbjct: 68 TGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNM 127
Query: 225 IVSGSFDESV 254
IVSGSFDE+V
Sbjct: 128 IVSGSFDETV 137
Score = 108 bits (260), Expect = 3e-24
Identities = 48/86 (55%), Positives = 62/86 (72%)
Frame = +1
Query: 472 KIYIGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 651
K + G + +LW+ S K LKTYTGH N +YCI + FSVT GK IVSGSEDN V++W
Sbjct: 211 KFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMW 270
Query: 652 NLQSKEIVQRLSGHTDTVLCTACHPT 729
L SK+++Q+L GHT+TV+ ACHPT
Sbjct: 271 ELNSKKLLQKLEGHTETVMNVACHPT 296
Score = 72.1 bits (169), Expect = 3e-13
Identities = 33/81 (40%), Positives = 50/81 (61%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
K+W G KT+ GH V ++ S +IVS S D+T+++W++++GKCLK L HS
Sbjct: 96 KLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHS 155
Query: 183 NYVFCCNFNPQSNLIVSGSFD 245
+ V +FN +LIVS S+D
Sbjct: 156 DPVTAVDFNRDGSLIVSSSYD 176
Score = 69.3 bits (162), Expect = 2e-12
Identities = 32/81 (39%), Positives = 50/81 (61%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+WDV TG +K L H++ V+FN ++IVS S+D RIWD +G+CLK L +
Sbjct: 97 LWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVL-PAHS 155
Query: 437 PPVSFVKFSPNGKYILAATLD 499
PV+ V F+ +G I++++ D
Sbjct: 156 DPVTAVDFNRDGSLIVSSSYD 176
Score = 62.5 bits (145), Expect = 3e-10
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGH---KMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK 173
++W KF KT +GH + IS ++ + IVS S+D + +WEL+S K L+ L+
Sbjct: 223 RLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLE 282
Query: 174 GHSNYVFCCNFNPQSNLIVSGSFDESV 254
GH+ V +P NLI SGS D++V
Sbjct: 283 GHTETVMNVACHPTENLIASGSLDKTV 309
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
+IW GK K + H ++ V ++ D LIVS+S D ++W+ +G C+KTL
Sbjct: 138 RIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDE 197
Query: 183 N-YVFCCNFNPQSNLIVSGSFDESV 254
N V F+P I+ G+ D ++
Sbjct: 198 NPPVSFVRFSPNGKFILVGTLDNTL 222
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Frame = +2
Query: 251 CWIWDVRTGKCLKPL-PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 427
C IWD TG C+K L + PVS V F+ +G I+ + D R+W+ +S + LKT
Sbjct: 179 CRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTG 238
Query: 428 DDNPP--VSFVKFSPNGKYILAATLDNTLN 511
N +S NGK I++ + DN ++
Sbjct: 239 HVNAQYCISSAFSVTNGKRIVSGSEDNCVH 268
Score = 50.0 bits (114), Expect = 2e-06
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 KIWGAYDGKFEKT-ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGH 179
+IW + G KT I +S V +S + + I+ + D TL++W +SS K LKT GH
Sbjct: 180 RIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGH 239
Query: 180 SNYVFCCN--FN-PQSNLIVSGSFDESV 254
N +C + F+ IVSGS D V
Sbjct: 240 VNAQYCISSAFSVTNGKRIVSGSEDNCV 267
Score = 49.2 bits (112), Expect = 3e-06
Identities = 25/66 (37%), Positives = 37/66 (56%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLS 687
+LWD G +KT GH N +C+ NF+ IVSGS D V IW++ + + ++ L
Sbjct: 96 KLWDVETGSLIKTLIGHTNYAFCV--NFN-PQSNMIVSGSFDETVRIWDVTTGKCLKVLP 152
Query: 688 GHTDTV 705
H+D V
Sbjct: 153 AHSDPV 158
Score = 48.4 bits (110), Expect = 5e-06
Identities = 22/68 (32%), Positives = 37/68 (54%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLS 687
++WD G C+KT +N F FS GK+I+ G+ DN + +WN+ S + ++ +
Sbjct: 180 RIWDSGTGHCVKTLIDDENPPVS-FVRFS-PNGKFILVGTLDNTLRLWNISSAKFLKTYT 237
Query: 688 GHTDTVLC 711
GH + C
Sbjct: 238 GHVNAQYC 245
Score = 48.0 bits (109), Expect = 6e-06
Identities = 24/69 (34%), Positives = 37/69 (53%)
Frame = +2
Query: 302 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 481
H + +S V F+ D IVS+S D ++WD +G +KTLI N V F+P I
Sbjct: 70 HENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFC-VNFNPQSNMI 128
Query: 482 LAATLDNTL 508
++ + D T+
Sbjct: 129 VSGSFDETV 137
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/78 (30%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Frame = +3
Query: 36 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSS-----GKCLKTLKGHSNYVFCC 200
+T++ H +S V +SSD RL+ SAS DKT++ + +++ + ++ GH N +
Sbjct: 18 QTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV 77
Query: 201 NFNPQSNLIVSGSFDESV 254
F+ + IVS S D+++
Sbjct: 78 AFSSDARFIVSASDDKTL 95
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/63 (28%), Positives = 38/63 (60%)
Frame = +1
Query: 538 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTA 717
++ +TGH+N + FS + ++IVS S+D + +W++++ +++ L GHT+ C
Sbjct: 64 VQEFTGHENGISDVA--FS-SDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVN 120
Query: 718 CHP 726
+P
Sbjct: 121 FNP 123
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +1
Query: 481 IGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ 660
+ G + ++WD + GKCLK H + + N G IVS S D L IW+
Sbjct: 129 VSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFN---RDGSLIVSSSYDGLCRIWDSG 185
Query: 661 SKEIVQRL 684
+ V+ L
Sbjct: 186 TGHCVKTL 193
Score = 35.5 bits (78), Expect = 0.036
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDP---VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 427
+W++ + K LK H + +S+ +G IVS S D +W+ S + L+ L +
Sbjct: 224 LWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKL-E 282
Query: 428 DDNPPVSFVKFSPNGKYILAATLDNTLNYGTIAEE 532
V V P I + +LD T+ T +E
Sbjct: 283 GHTETVMNVACHPTENLIASGSLDKTVRIWTQKKE 317
Score = 31.9 bits (69), Expect = 0.45
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVW 137
+W K + + GH + +VA LI S S DKT+++W
Sbjct: 269 MWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 139 bits (337), Expect = 2e-33
Identities = 62/91 (68%), Positives = 75/91 (82%), Gaps = 3/91 (3%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
IW+V+TGKC++ + AHS P+S+VHFNRDGSLIVS+S+DG C+IWD G CLKTLIDD +
Sbjct: 154 IWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKS 213
Query: 437 PPVSFVKFSPNGKYILAATLDNTL---NYGT 520
P VSF KFSPNGK+IL ATLD+TL NY T
Sbjct: 214 PAVSFAKFSPNGKFILVATLDSTLKLSNYAT 244
Score = 107 bits (256), Expect = 1e-23
Identities = 48/84 (57%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG-KCLKTLKGHS 182
+W A + GH GISD+AWSSDS SASDD TL++W+ S +CLK L+GH+
Sbjct: 69 LWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHT 128
Query: 183 NYVFCCNFNPQSNLIVSGSFDESV 254
N+VFC NFNP SNLIVSGSFDE++
Sbjct: 129 NFVFCVNFNPPSNLIVSGSFDETI 152
Score = 105 bits (252), Expect = 3e-23
Identities = 44/73 (60%), Positives = 58/73 (79%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLS 687
+L +Y+ GK LK YTGH N+ +CI + FSVT GK+IVSGSEDN VY+W+LQ++ I+QRL
Sbjct: 238 KLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLE 297
Query: 688 GHTDTVLCTACHP 726
GHTD V+ +CHP
Sbjct: 298 GHTDAVISVSCHP 310
Score = 65.7 bits (153), Expect = 3e-11
Identities = 33/84 (39%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Frame = +2
Query: 257 IWDVRTG-KCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 433
IWD R+ +CLK L H++ V V+FN +LIVS S+D RIW+ +G+C++ +I
Sbjct: 111 IWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVR-MIKAH 169
Query: 434 NPPVSFVKFSPNGKYILAATLDNT 505
+ P+S V F+ +G I++A+ D +
Sbjct: 170 SMPISSVHFNRDGSLIVSASHDGS 193
Score = 63.3 bits (147), Expect = 2e-10
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +3
Query: 3 KIWGAYDG-KFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGH 179
+IW A + K + GH + V ++ S LIVS S D+T+++WE+ +GKC++ +K H
Sbjct: 110 RIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAH 169
Query: 180 SNYVFCCNFNPQSNLIVSGSFDES 251
S + +FN +LIVS S D S
Sbjct: 170 SMPISSVHFNRDGSLIVSASHDGS 193
Score = 61.3 bits (142), Expect = 6e-10
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL-KGH 179
+IW GK + I H M IS V ++ D LIVSAS D + K+W+ G CLKTL
Sbjct: 153 RIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDK 212
Query: 180 SNYVFCCNFNPQSNLIVSGSFDESV 254
S V F+P I+ + D ++
Sbjct: 213 SPAVSFAKFSPNGKFILVATLDSTL 237
Score = 52.0 bits (119), Expect = 4e-07
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKM-GISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGH 179
KIW A +G KT+ K +S +S + + I+ A+ D TLK+ ++GK LK GH
Sbjct: 195 KIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGH 254
Query: 180 SNYVFCCN--FN-PQSNLIVSGSFDESV 254
+N VFC F+ IVSGS D V
Sbjct: 255 TNKVFCITSAFSVTNGKYIVSGSEDNCV 282
Score = 51.6 bits (118), Expect = 5e-07
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 6/132 (4%)
Frame = +2
Query: 251 CWIWDVRTGKCLKPLPAHSDP-VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 427
C IWD + G CLK L P VS F+ +G I+ ++ D ++ + A+G+ LK
Sbjct: 194 CKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTG 253
Query: 428 DDNPPVSFVK-FS-PNGKYILAATLDNTLNYGTIAEENV*RHIRDTRTKNIVSL---PTL 592
N FS NGKYI++ + DN + + N+ + + + T ++S+ P
Sbjct: 254 HTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRL-EGHTDAVISVSCHPVQ 312
Query: 593 VSLAGSG*YRDQ 628
++ SG + D+
Sbjct: 313 NEISSSGNHLDK 324
Score = 47.6 bits (108), Expect = 8e-06
Identities = 24/70 (34%), Positives = 39/70 (55%)
Frame = +3
Query: 36 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 215
KT+ GH IS V +S+D L+ SAS DKT+ +W ++ + +GHS+ + ++
Sbjct: 37 KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSD 96
Query: 216 SNLIVSGSFD 245
S+ S S D
Sbjct: 97 SHYTCSASDD 106
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Frame = +3
Query: 24 GKFEKTISGH--KMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVF 194
GKF K +GH K+ A+S ++ + IVS S+D + +W+L + L+ L+GH++ V
Sbjct: 245 GKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVI 304
Query: 195 CCNFNPQSNLIVS 233
+ +P N I S
Sbjct: 305 SVSCHPVQNEISS 317
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/68 (32%), Positives = 37/68 (54%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLS 687
++WD G CLKT K+ FA FS GK+I+ + D+ + + N + + ++ +
Sbjct: 195 KIWDAKEGTCLKTLIDDKSPAVS-FAKFS-PNGKFILVATLDSTLKLSNYATGKFLKVYT 252
Query: 688 GHTDTVLC 711
GHT+ V C
Sbjct: 253 GHTNKVFC 260
Score = 41.1 bits (92), Expect = 7e-04
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 508 QLWDY-SRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRL 684
++WD S +CLK GH N +C+ NF+ IVSGS D + IW +++ + V+ +
Sbjct: 110 RIWDARSPYECLKVLRGHTNFVFCV--NFNPPSNL-IVSGSFDETIRIWEVKTGKCVRMI 166
Query: 685 SGHT 696
H+
Sbjct: 167 KAHS 170
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDD 433
+W + HS +S + ++ D S+S D RIWD S +CLK L
Sbjct: 69 LWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHT 128
Query: 434 NPPVSFVKFSPNGKYILAATLDNTL 508
N V V F+P I++ + D T+
Sbjct: 129 N-FVFCVNFNPPSNLIVSGSFDETI 152
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/75 (30%), Positives = 40/75 (53%)
Frame = +2
Query: 284 LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 463
LK L H+ +S V F+ DG+L+ S+S D +W +A+ L + + +S + +S
Sbjct: 36 LKTLEGHTAAISCVKFSNDGNLLASASVDKTMILW-SATNYSLIHRYEGHSSGISDLAWS 94
Query: 464 PNGKYILAATLDNTL 508
+ Y +A+ D TL
Sbjct: 95 SDSHYTCSASDDCTL 109
Score = 33.1 bits (72), Expect = 0.19
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 159 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 254
LKTL+GH+ + C F+ NL+ S S D+++
Sbjct: 36 LKTLEGHTAAISCVKFSNDGNLLASASVDKTM 67
Score = 31.5 bits (68), Expect = 0.59
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +1
Query: 520 YSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTD 699
Y + LKT GH C+ FS G + S S D + +W+ + ++ R GH+
Sbjct: 30 YKPYRHLKTLEGHTAAISCV--KFS-NDGNLLASASVDKTMILWSATNYSLIHRYEGHSS 86
Query: 700 TV 705
+
Sbjct: 87 GI 88
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/70 (22%), Positives = 29/70 (41%)
Frame = +1
Query: 475 IYIGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 654
+ + G + ++W+ GKC++ H + N G IVS S D IW+
Sbjct: 142 LIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFN---RDGSLIVSASHDGSCKIWD 198
Query: 655 LQSKEIVQRL 684
+ ++ L
Sbjct: 199 AKEGTCLKTL 208
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 511 LWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSK-EIVQRLS 687
LW + + Y GH + + + + + S S+D + IW+ +S E ++ L
Sbjct: 69 LWSATNYSLIHRYEGHSSGISDLAWS---SDSHYTCSASDDCTLRIWDARSPYECLKVLR 125
Query: 688 GHTDTVLCTACHP 726
GHT+ V C +P
Sbjct: 126 GHTNFVFCVNFNP 138
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 74.5 bits (175), Expect = 6e-14
Identities = 31/81 (38%), Positives = 49/81 (60%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
++W G+F GH + V+WS+DSRL++S S D TLK+WE+ + K + L GH+
Sbjct: 385 RLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHA 444
Query: 183 NYVFCCNFNPQSNLIVSGSFD 245
+ VF +++P +VSG D
Sbjct: 445 DEVFAVDWSPDGEKVVSGGKD 465
Score = 54.8 bits (126), Expect = 6e-08
Identities = 25/68 (36%), Positives = 41/68 (60%)
Frame = +3
Query: 36 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 215
+TI+GH + V++S D + + S S D T+++W+L + L T KGH N+V ++P
Sbjct: 103 QTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPD 162
Query: 216 SNLIVSGS 239
+VSGS
Sbjct: 163 GKHLVSGS 170
Score = 52.8 bits (121), Expect = 2e-07
Identities = 25/83 (30%), Positives = 47/83 (56%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
+IW K +SGH + ++ V W D +I + S D T+K+WE + GK ++ LKGH
Sbjct: 224 RIWDITLKKSIICLSGHTLAVTCVKWGGDG-IIYTGSQDCTIKMWETTQGKLIRELKGHG 282
Query: 183 NYVFCCNFNPQSNLIVSGSFDES 251
+++ + + ++ +G+FD +
Sbjct: 283 HWINSLALSTE-YVLRTGAFDHT 304
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/74 (31%), Positives = 47/74 (63%)
Frame = +3
Query: 33 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 212
+K ++GH+ ++ V +S D + I SAS DK++++W +G+ + +GH V+ +++
Sbjct: 353 KKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSA 412
Query: 213 QSNLIVSGSFDESV 254
S L++SGS D ++
Sbjct: 413 DSRLLLSGSKDSTL 426
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 WIWDVRTGKCLKP-LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 430
++W+ K K L H V+ V+F+ DG I S+S+D R+W+ +GQ + T+
Sbjct: 342 FLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFV-TVFRG 400
Query: 431 DNPPVSFVKFSPNGKYILAATLDNTL 508
PV V +S + + +L+ + D+TL
Sbjct: 401 HVGPVYQVSWSADSRLLLSGSKDSTL 426
Score = 45.2 bits (102), Expect = 4e-05
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 388
IW++RT K + LP H+D V AV ++ DG +VS D + ++W
Sbjct: 428 IWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Frame = +3
Query: 9 WGAYDGKFEKT-ISGHKMGISDVAW-----SSDSRLIVSASDDKTLKVWELSSGKCLKTL 170
W G+ E + ++GHK I+ ++W SS R V++S D ++W+++ K + L
Sbjct: 178 WNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICL 237
Query: 171 KGHSNYVFCCNFNPQSNLIVSGSFD 245
GH+ V C + +I +GS D
Sbjct: 238 SGHTLAVTCVKWG-GDGIIYTGSQD 261
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/73 (28%), Positives = 40/73 (54%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLS 687
+LW+ G+ + + GH Y + ++S + ++SGS+D+ + IW +++K++ Q L
Sbjct: 385 RLWNGITGQFVTVFRGHVGPVYQV--SWSADS-RLLLSGSKDSTLKIWEIRTKKLKQDLP 441
Query: 688 GHTDTVLCTACHP 726
GH D V P
Sbjct: 442 GHADEVFAVDWSP 454
Score = 41.1 bits (92), Expect = 7e-04
Identities = 24/53 (45%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +3
Query: 99 IVSASDDKTLKVWELS-SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 254
+VS SDD T+ +WE S S + K L GH V F+P I S SFD+SV
Sbjct: 332 LVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSV 384
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/84 (27%), Positives = 42/84 (50%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+W+ TG+ + H PV V ++ D L++S S D +IW+ + + LK +
Sbjct: 386 LWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKK-LKQDLPGHA 444
Query: 437 PPVSFVKFSPNGKYILAATLDNTL 508
V V +SP+G+ +++ D L
Sbjct: 445 DEVFAVDWSPDGEKVVSGGKDRVL 468
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/72 (30%), Positives = 38/72 (52%)
Frame = +2
Query: 278 KCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 457
+C + + H++ V V F+ DG + S S D R+WD + L T N V V
Sbjct: 100 RCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKN-WVLTVA 158
Query: 458 FSPNGKYILAAT 493
+SP+GK++++ +
Sbjct: 159 WSPDGKHLVSGS 170
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/65 (33%), Positives = 33/65 (50%)
Frame = +1
Query: 532 KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLC 711
+C +T GH C+ +FS GK + SGS D V +W+L ++ + GH + VL
Sbjct: 100 RCSQTIAGHAEAVLCV--SFS-PDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLT 156
Query: 712 TACHP 726
A P
Sbjct: 157 VAWSP 161
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWE 140
KIW K ++ + GH + V WS D +VS D+ LK+W+
Sbjct: 427 KIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLWK 472
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCL-KTLKGH 179
++W Y T GHK + VAWS D + +VS S + W G+ L GH
Sbjct: 134 RLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGH 193
Query: 180 SNYVFCCNFNP 212
++ ++ P
Sbjct: 194 KKWITGISWEP 204
Score = 35.1 bits (77), Expect = 0.048
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 153 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 254
+C +T+ GH+ V C +F+P + SGS D +V
Sbjct: 100 RCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTV 133
Score = 33.1 bits (72), Expect = 0.19
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +1
Query: 511 LWDYSRGKC-LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLS 687
LW+ S K K TGH+ ++ FS GKWI S S D V +WN + + V
Sbjct: 343 LWEPSVSKQPKKRLTGHQQLVNHVY--FS-PDGKWIASASFDKSVRLWNGITGQFVTVFR 399
Query: 688 GHTDTV 705
GH V
Sbjct: 400 GHVGPV 405
Score = 31.9 bits (69), Expect = 0.45
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIV-QRL 684
+LWD L T GHKN + + +S GK +VSGS+ + WN + E+ L
Sbjct: 134 RLWDLYTETPLFTCKGHKN--WVLTVAWS-PDGKHLVSGSKSGEICCWNPKKGELEGSPL 190
Query: 685 SGH 693
+GH
Sbjct: 191 TGH 193
Score = 31.5 bits (68), Expect = 0.59
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +2
Query: 350 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 508
+VS S D +W+ + + K + V+ V FSP+GK+I +A+ D ++
Sbjct: 332 LVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSV 384
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIV-SGSEDNLVYIWNLQSKEIVQRL 684
++WD + K + +GH C+ GG I+ +GS+D + +W ++++ L
Sbjct: 224 RIWDITLKKSIICLSGHTLAVTCV-----KWGGDGIIYTGSQDCTIKMWETTQGKLIREL 278
Query: 685 SGH 693
GH
Sbjct: 279 KGH 281
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/60 (23%), Positives = 31/60 (51%)
Frame = +1
Query: 472 KIYIGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 651
++ + G ++W+ K + GH +E + + ++S G K +VSG +D ++ +W
Sbjct: 415 RLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAV--DWSPDGEK-VVSGGKDRVLKLW 471
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 406
+WD+ T L H + V V ++ DG +VS S G W+ G+
Sbjct: 135 LWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGE 184
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 616 VSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLC 711
V+ S+D IW++ K+ + LSGHT V C
Sbjct: 215 VTSSKDGDARIWDITLKKSIICLSGHTLAVTC 246
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +1
Query: 613 IVSGSEDNLVYIWNLQ-SKEIVQRLSGHTDTV 705
+VSGS+D +++W SK+ +RL+GH V
Sbjct: 332 LVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLV 363
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 74.1 bits (174), Expect = 8e-14
Identities = 32/84 (38%), Positives = 52/84 (61%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
K+W + T+ GH I V + ++ IVSASDD+T+++W S C+ L GH+
Sbjct: 76 KVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHN 135
Query: 183 NYVFCCNFNPQSNLIVSGSFDESV 254
+YV C +F+P+ +L+VS S D++V
Sbjct: 136 HYVMCASFHPKEDLVVSASLDQTV 159
Score = 58.8 bits (136), Expect = 3e-09
Identities = 28/84 (33%), Positives = 43/84 (51%)
Frame = +1
Query: 475 IYIGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 654
+++ G ++W+Y +CL T GH + Y F WIVS S+D + IWN
Sbjct: 65 LFVSGGDDYKIKVWNYKTHRCLFTLLGHLD--YIRTVQFHHEN-PWIVSASDDQTIRIWN 121
Query: 655 LQSKEIVQRLSGHTDTVLCTACHP 726
QS+ + L+GH V+C + HP
Sbjct: 122 WQSRTCISVLTGHNHYVMCASFHP 145
Score = 55.6 bits (128), Expect = 3e-08
Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKC--LKTLKGH 179
++G D + + GH G++ ++ LIVS +DD+ +K+W ++ K + TL+GH
Sbjct: 188 LFGGVDAIVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGH 247
Query: 180 SNYVFCCNFNPQSNLIVSGSFDESV 254
N V F+ + ++IVS S D+S+
Sbjct: 248 MNNVSSVMFHAKQDIIVSNSEDKSI 272
Score = 54.0 bits (124), Expect = 1e-07
Identities = 27/84 (32%), Positives = 45/84 (53%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+W+ +T +CL L H D + V F+ + IVS+S D RIW+ S C+ +++ N
Sbjct: 77 VWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCI-SVLTGHN 135
Query: 437 PPVSFVKFSPNGKYILAATLDNTL 508
V F P +++A+LD T+
Sbjct: 136 HYVMCASFHPKEDLVVSASLDQTV 159
Score = 51.2 bits (117), Expect = 7e-07
Identities = 25/84 (29%), Positives = 42/84 (50%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
++W G H+ + V + + L VS DD +KVW + +CL TL GH
Sbjct: 34 QLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHL 93
Query: 183 NYVFCCNFNPQSNLIVSGSFDESV 254
+Y+ F+ ++ IVS S D+++
Sbjct: 94 DYIRTVQFHHENPWIVSASDDQTI 117
Score = 48.4 bits (110), Expect = 5e-06
Identities = 25/84 (29%), Positives = 42/84 (50%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+WD R G + H PV VHF+ L VS D ++W+ + +CL TL+ +
Sbjct: 35 LWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLD 94
Query: 437 PPVSFVKFSPNGKYILAATLDNTL 508
+ V+F +I++A+ D T+
Sbjct: 95 -YIRTVQFHHENPWIVSASDDQTI 117
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/80 (26%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = +3
Query: 3 KIWGAYDGKFEK--TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKG 176
K+W + K + T+ GH +S V + + +IVS S+DK+++VW+ + ++T +
Sbjct: 229 KLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRR 288
Query: 177 HSNYVFCCNFNPQSNLIVSG 236
+ + +P+ NL+ +G
Sbjct: 289 EHDRFWILAVHPEINLLAAG 308
Score = 35.1 bits (77), Expect = 0.048
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLS 687
QLWDY G + + H+ + + S VSG +D + +WN ++ + L
Sbjct: 34 QLWDYRMGTLIDRFDEHEGPVRGVHFHNS---QPLFVSGGDDYKIKVWNYKTHRCLFTLL 90
Query: 688 GHTDTVLCTACH 723
GH D + H
Sbjct: 91 GHLDYIRTVQFH 102
Score = 31.5 bits (68), Expect = 0.59
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK 155
+IW ++GH + ++ L+VSAS D+T++VW++ + K
Sbjct: 118 RIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALK 168
Score = 31.1 bits (67), Expect = 0.78
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 293 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 418
L H + VS+V F+ +IVS+S D R+WD ++T
Sbjct: 244 LRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQT 285
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/86 (27%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
Frame = +1
Query: 475 IYIGGDVRQHTQLWDYSRGKC--LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYI 648
I G D RQ +LW + K + T GH N + + IVS SED + +
Sbjct: 219 IVSGADDRQ-VKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQD---IIVSNSEDKSIRV 274
Query: 649 WNLQSKEIVQRLSGHTDTVLCTACHP 726
W+ + +Q D A HP
Sbjct: 275 WDATKRTGIQTFRREHDRFWILAVHP 300
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 73.3 bits (172), Expect = 1e-13
Identities = 32/84 (38%), Positives = 52/84 (61%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
K+W + + T+ GH I V + + IVSASDD+T+++W S C+ L GH+
Sbjct: 76 KVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHN 135
Query: 183 NYVFCCNFNPQSNLIVSGSFDESV 254
+YV C +F+P+ +L+VS S D++V
Sbjct: 136 HYVMCASFHPKEDLVVSASLDQTV 159
Score = 58.4 bits (135), Expect = 5e-09
Identities = 29/84 (34%), Positives = 43/84 (51%)
Frame = +1
Query: 475 IYIGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 654
+++ G ++W+Y +CL T GH + Y F WIVS S+D + IWN
Sbjct: 65 LFVSGGDDYKIKVWNYKNHRCLFTLLGHLD--YIRTVQFHHEY-PWIVSASDDQTIRIWN 121
Query: 655 LQSKEIVQRLSGHTDTVLCTACHP 726
QS+ V L+GH V+C + HP
Sbjct: 122 WQSRTCVSVLTGHNHYVMCASFHP 145
Score = 56.8 bits (131), Expect = 1e-08
Identities = 28/85 (32%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKC--LKTLKGH 179
++G D + + GH G++ A+ LIVS +DD+ +K+W ++ K + TL+GH
Sbjct: 188 LFGGVDAIVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGH 247
Query: 180 SNYVFCCNFNPQSNLIVSGSFDESV 254
N V F+ + ++IVS S D+S+
Sbjct: 248 MNNVSSVMFHAKQDIIVSNSEDKSI 272
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/84 (30%), Positives = 44/84 (52%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+W+ + +CL L H D + V F+ + IVS+S D RIW+ S C+ +++ N
Sbjct: 77 VWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCV-SVLTGHN 135
Query: 437 PPVSFVKFSPNGKYILAATLDNTL 508
V F P +++A+LD T+
Sbjct: 136 HYVMCASFHPKEDLVVSASLDQTV 159
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/84 (29%), Positives = 41/84 (48%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
++W G H+ + V + + L VS DD +KVW + +CL TL GH
Sbjct: 34 QLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHL 93
Query: 183 NYVFCCNFNPQSNLIVSGSFDESV 254
+Y+ F+ + IVS S D+++
Sbjct: 94 DYIRTVQFHHEYPWIVSASDDQTI 117
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/84 (29%), Positives = 42/84 (50%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+WD R G + H PV VHF+ L VS D ++W+ + +CL TL+ +
Sbjct: 35 LWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLD 94
Query: 437 PPVSFVKFSPNGKYILAATLDNTL 508
+ V+F +I++A+ D T+
Sbjct: 95 -YIRTVQFHHEYPWIVSASDDQTI 117
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/80 (27%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = +3
Query: 3 KIWGAYDGKFEK--TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKG 176
K+W + K + T+ GH +S V + + +IVS S+DK+++VW+ + L+T +
Sbjct: 229 KLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRR 288
Query: 177 HSNYVFCCNFNPQSNLIVSG 236
+ + +P+ NL+ +G
Sbjct: 289 EHDRFWILAVHPEMNLLAAG 308
Score = 35.1 bits (77), Expect = 0.048
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLS 687
QLWDY G + + H+ + + S VSG +D + +WN ++ + L
Sbjct: 34 QLWDYRMGTLIDRFDEHEGPVRGVHFHNS---QPLFVSGGDDYKIKVWNYKNHRCLFTLL 90
Query: 688 GHTDTVLCTACH 723
GH D + H
Sbjct: 91 GHLDYIRTVQFH 102
Score = 31.9 bits (69), Expect = 0.45
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 293 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 418
L H + VS+V F+ +IVS+S D R+WD L+T
Sbjct: 244 LRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQT 285
Score = 31.5 bits (68), Expect = 0.59
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSS 149
+IW ++GH + ++ L+VSAS D+T++VW++ +
Sbjct: 118 RIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA 166
Score = 29.5 bits (63), Expect = 2.4
Identities = 24/86 (27%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
Frame = +1
Query: 475 IYIGGDVRQHTQLWDYSRGKC--LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYI 648
I G D RQ +LW + K + T GH N + + IVS SED + +
Sbjct: 219 IVSGADDRQ-VKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQD---IIVSNSEDKSIRV 274
Query: 649 WNLQSKEIVQRLSGHTDTVLCTACHP 726
W+ + +Q D A HP
Sbjct: 275 WDATKRTGLQTFRREHDRFWILAVHP 300
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 66.9 bits (156), Expect = 1e-11
Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Frame = +3
Query: 6 IWGAY-DGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
+W + D K + GHK I D+ W+SD IVSAS DKT++ W++ +GK +K + HS
Sbjct: 79 LWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHS 138
Query: 183 NYV-FCCNFNPQSNLIVSGSFD 245
++V CC LI+SGS D
Sbjct: 139 SFVNSCCPTRRGPPLIISGSDD 160
Score = 50.8 bits (116), Expect = 9e-07
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Frame = +1
Query: 526 RGKCLKTYTGHKN--EKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTD 699
+ +C+K + GH++ EK + ++S G K + +GS D +V+IW+ S+ + +L GHT
Sbjct: 257 QNRCVKIFEGHQHNFEKNLLKCSWSPDGTK-VTAGSSDRMVHIWDTTSRRTIYKLPGHTG 315
Query: 700 TVLCTACHPT 729
+V HPT
Sbjct: 316 SVNECVFHPT 325
Score = 46.8 bits (106), Expect = 1e-05
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +2
Query: 260 WDVRTGKCLKPLPAHSDPVSAVHFNRDG-SLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
WDV TGK +K + HS V++ R G LI+S S DG ++WD ++T D
Sbjct: 123 WDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTF--PDK 180
Query: 437 PPVSFVKFSPNGKYILAATLDN 502
++ V FS I +DN
Sbjct: 181 YQITAVSFSDAADKIFTGGVDN 202
Score = 44.8 bits (101), Expect = 6e-05
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL----SSGKCLKTL 170
K+W G+ T+ GH+ I+ ++ S D +++ D L VW++ +C+K
Sbjct: 205 KVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIF 264
Query: 171 KGHS-NY---VFCCNFNPQSNLIVSGSFDESV 254
+GH N+ + C+++P + +GS D V
Sbjct: 265 EGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMV 296
Score = 44.4 bits (100), Expect = 8e-05
Identities = 19/63 (30%), Positives = 35/63 (55%)
Frame = +3
Query: 75 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 254
+WS D + + S D+ + +W+ +S + + L GH+ V C F+P +I S S D+++
Sbjct: 279 SWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNI 338
Query: 255 GYG 263
G
Sbjct: 339 YLG 341
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +2
Query: 248 ECWIWDVRTGKC--LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 421
E ++W V G C L H + + +H+ DGS IVS+S D R WD +G+ +K +
Sbjct: 76 EIFLWRVH-GDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKM 134
Query: 422 ID 427
+
Sbjct: 135 AE 136
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +1
Query: 475 IYIGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFA-NFSVTGGKWIVSGSEDNLVYIW 651
+ I G +LWD + ++T+ +KY I A +FS K I +G DN V +W
Sbjct: 153 LIISGSDDGTAKLWDMRQRGAIQTFP----DKYQITAVSFSDAADK-IFTGGVDNDVKVW 207
Query: 652 NLQSKEIVQRLSGHTDTVLCTACHP 726
+L+ E L GH DT+ + P
Sbjct: 208 DLRKGEATMTLEGHQDTITGMSLSP 232
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD----TASGQCLKTLI 424
+WD+R G+ L H D ++ + + DGS ++++ D +WD +C+K
Sbjct: 206 VWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFE 265
Query: 425 -DDDNPPVSFVK--FSPNGKYILAATLDNTLN 511
N + +K +SP+G + A + D ++
Sbjct: 266 GHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVH 297
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 42 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG-KCLKTLKGHSNYVFCCNFNPQS 218
+SGH + + ++ LI S S D+ + +W + K LKGH N + ++
Sbjct: 49 LSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDG 108
Query: 219 NLIVSGSFDESV 254
+ IVS S D++V
Sbjct: 109 SQIVSASPDKTV 120
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/67 (25%), Positives = 35/67 (52%)
Frame = +3
Query: 54 KMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 233
K I+ V++S + I + D +KVW+L G+ TL+GH + + + +P + +++
Sbjct: 180 KYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLT 239
Query: 234 GSFDESV 254
D +
Sbjct: 240 NGMDNKL 246
Score = 32.7 bits (71), Expect = 0.26
Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSR-LIVSASDDKTLKVWELSSGKCLKTLKGH 179
+ W GK K ++ H ++ + LI+S SDD T K+W++ ++T
Sbjct: 121 RAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFP-D 179
Query: 180 SNYVFCCNFNPQSNLIVSGSFDESV 254
+ +F+ ++ I +G D V
Sbjct: 180 KYQITAVSFSDAADKIFTGGVDNDV 204
Score = 31.9 bits (69), Expect = 0.45
Identities = 21/73 (28%), Positives = 35/73 (47%)
Frame = +1
Query: 511 LWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSG 690
LW G C K + K K I + G IVS S D V W++++ + +++++
Sbjct: 79 LWRV-HGDC-KNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAE 136
Query: 691 HTDTVLCTACHPT 729
H+ V +C PT
Sbjct: 137 HSSFV--NSCCPT 147
Score = 29.1 bits (62), Expect = 3.2
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 8/97 (8%)
Frame = +2
Query: 257 IWDVRT----GKCLKPLPAHSDPVSA----VHFNRDGSLIVSSSYDGLCRIWDTASGQCL 412
+WD+R +C+K H ++ DG+ + + S D + IWDT S + +
Sbjct: 248 VWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTI 307
Query: 413 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLNYGTI 523
L V+ F P I + + D + G I
Sbjct: 308 YKL-PGHTGSVNECVFHPTEPIIGSCSSDKNIYLGEI 343
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = +1
Query: 514 WDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQ 678
WD GK +K H + + + G I+SGS+D +W+++ + +Q
Sbjct: 123 WDVETGKQIKKMAEHSS--FVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQ 175
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 64.9 bits (151), Expect = 5e-11
Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Frame = +3
Query: 48 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNL 224
GH + D++WS L+ S+S DKT+++W+LSS CLK HS+YV C FNP N
Sbjct: 466 GHLDDVLDLSWSKSQHLL-SSSMDKTVRLWDLSSKTCLKVF-SHSDYVTCIQFNPVDDNY 523
Query: 225 IVSGSFDESV 254
+SGS D V
Sbjct: 524 FISGSLDAKV 533
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +2
Query: 302 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP-NGKY 478
H D V + +++ L+ SSS D R+WD +S CLK D V+ ++F+P + Y
Sbjct: 467 HLDDVLDLSWSKSQHLL-SSSMDKTVRLWDLSSKTCLKVFSHSDY--VTCIQFNPVDDNY 523
Query: 479 ILAATLDNTLNYGTIAEENV 538
++ +LD + +I + V
Sbjct: 524 FISGSLDAKVRIWSIPDHQV 543
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIV 675
+LWD S CLK ++ H + CI F+ + +SGS D V IW++ ++V
Sbjct: 492 RLWDLSSKTCLKVFS-HSDYVTCI--QFNPVDDNYFISGSLDAKVRIWSIPDHQVV 544
Score = 34.7 bits (76), Expect = 0.064
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +1
Query: 547 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQS 663
+ G +N I A+ + + GK++VS SED+ VY+WN S
Sbjct: 638 FKGFRNTNSQISASLT-SNGKFLVSASEDSNVYVWNYDS 675
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 42 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL 143
I HK I + +S D R + SA +D +++W++
Sbjct: 359 IQAHKGSIWSIKFSLDGRYLASAGEDCVIQIWKV 392
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 63.7 bits (148), Expect = 1e-10
Identities = 29/86 (33%), Positives = 47/86 (54%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
KIW T GH G++ + ++ D R IVS +D +KVW+L++GK L K H
Sbjct: 219 KIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHE 278
Query: 183 NYVFCCNFNPQSNLIVSGSFDESVGY 260
+ +F+P L+ +GS D++V +
Sbjct: 279 GKIQSLDFHPHEFLLATGSADKTVKF 304
Score = 57.6 bits (133), Expect = 8e-09
Identities = 27/84 (32%), Positives = 39/84 (46%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
K+W + K +T++GH+ V + S S D LK+W++ C+ T KGH+
Sbjct: 177 KLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHT 236
Query: 183 NYVFCCNFNPQSNLIVSGSFDESV 254
V F P IVSG D V
Sbjct: 237 RGVNVLRFTPDGRWIVSGGEDNVV 260
Score = 54.8 bits (126), Expect = 6e-08
Identities = 24/85 (28%), Positives = 43/85 (50%)
Frame = +1
Query: 472 KIYIGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 651
+ + G + + ++WD + C+ TY GH + F+ G+WIVSG EDN+V +W
Sbjct: 207 EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVL--RFT-PDGRWIVSGGEDNVVKVW 263
Query: 652 NLQSKEIVQRLSGHTDTVLCTACHP 726
+L + +++ H + HP
Sbjct: 264 DLTAGKLLHEFKSHEGKIQSLDFHP 288
Score = 54.0 bits (124), Expect = 1e-07
Identities = 22/72 (30%), Positives = 38/72 (52%)
Frame = +3
Query: 39 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 218
++ GH GI V + + L+ + + T+K+W+L K ++TL GH + NF+P
Sbjct: 147 SLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFG 206
Query: 219 NLIVSGSFDESV 254
SGS D ++
Sbjct: 207 EFFASGSLDTNL 218
Score = 48.8 bits (111), Expect = 4e-06
Identities = 22/86 (25%), Positives = 40/86 (46%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
IWD+R C+ H+ V+ + F DG IVS D + ++WD +G+ L +
Sbjct: 220 IWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEG 279
Query: 437 PPVSFVKFSPNGKYILAATLDNTLNY 514
+ + F P+ + + D T+ +
Sbjct: 280 -KIQSLDFHPHEFLLATGSADKTVKF 304
Score = 48.0 bits (109), Expect = 6e-06
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLS 687
+LWD K ++T TGH++ C+ NF G ++ SGS D + IW+++ K +
Sbjct: 177 KLWDLEEAKVVRTLTGHRSN--CVSVNFHPFG-EFFASGSLDTNLKIWDIRKKGCIHTYK 233
Query: 688 GHT 696
GHT
Sbjct: 234 GHT 236
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/92 (23%), Positives = 43/92 (46%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+W + + L HS + +V F+ L+ + + G ++WD + ++TL +
Sbjct: 136 LWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRS 195
Query: 437 PPVSFVKFSPNGKYILAATLDNTLNYGTIAEE 532
VS V F P G++ + +LD L I ++
Sbjct: 196 NCVS-VNFHPFGEFFASGSLDTNLKIWDIRKK 226
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/78 (25%), Positives = 35/78 (44%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
K+W GK H+ I + + L+ + S DKT+K W+L + + + + +
Sbjct: 261 KVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTET 320
Query: 183 NYVFCCNFNPQSNLIVSG 236
V C FNP ++ G
Sbjct: 321 TGVRCLTFNPDGKSVLCG 338
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/85 (18%), Positives = 37/85 (43%)
Frame = +1
Query: 472 KIYIGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 651
++ + G LW + + + GH + + F + G + +G+ + +W
Sbjct: 123 RVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSV--TFDASEGL-VAAGAASGTIKLW 179
Query: 652 NLQSKEIVQRLSGHTDTVLCTACHP 726
+L+ ++V+ L+GH + HP
Sbjct: 180 DLEEAKVVRTLTGHRSNCVSVNFHP 204
Score = 33.5 bits (73), Expect = 0.15
Identities = 12/50 (24%), Positives = 27/50 (54%)
Frame = +3
Query: 90 SRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 239
SR++V+ +D + +W + + +L GHS+ + F+ L+ +G+
Sbjct: 122 SRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGA 171
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 63.3 bits (147), Expect = 2e-10
Identities = 32/73 (43%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = +3
Query: 39 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-Q 215
+ GH + D+AWS L+ S+S DKT+++W LSS CLK HS+YV C FNP
Sbjct: 508 SFQGHVDDVLDLAWSKSQHLL-SSSMDKTVRLWNLSSQTCLKVF-SHSDYVTCIQFNPVD 565
Query: 216 SNLIVSGSFDESV 254
+SGS D V
Sbjct: 566 DRYFISGSLDAKV 578
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/72 (27%), Positives = 39/72 (54%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLS 687
+LW+ S CLK ++ H + CI F+ ++ +SGS D V +W++ +++V
Sbjct: 537 RLWNLSSQTCLKVFS-HSDYVTCI--QFNPVDDRYFISGSLDAKVRVWSIPDRQVVDWYD 593
Query: 688 GHTDTVLCTACH 723
H ++ +AC+
Sbjct: 594 LH--EMVTSACY 603
Score = 37.5 bits (83), Expect = 0.009
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +2
Query: 302 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP-NGKY 478
H D V + +++ L+ SSS D R+W+ +S CLK D V+ ++F+P + +Y
Sbjct: 512 HVDDVLDLAWSKSQHLL-SSSMDKTVRLWNLSSQTCLKVFSHSDY--VTCIQFNPVDDRY 568
Query: 479 ILAATLDNTLNYGTIAEENV 538
++ +LD + +I + V
Sbjct: 569 FISGSLDAKVRVWSIPDRQV 588
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 553 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQS 663
G +N I A+ + G K++VS SED+ VYIW +S
Sbjct: 685 GFRNTSSQISASITADG-KYVVSASEDSHVYIWKYES 720
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 62.9 bits (146), Expect = 2e-10
Identities = 25/84 (29%), Positives = 50/84 (59%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
++W G+ + GH+ + +A S D R + S +D T+ +W+LS+ +C+ L GH+
Sbjct: 524 RLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHN 583
Query: 183 NYVFCCNFNPQSNLIVSGSFDESV 254
+ V+ +++ + +L+ SGS D +V
Sbjct: 584 SCVWSLSYSGEGSLLASGSADCTV 607
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/84 (27%), Positives = 45/84 (53%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
+IW + + ++GH +SDV W + I + S DKT+++W++ +G+C++ GH
Sbjct: 485 RIWSMDRIQPLRIMAGH---LSDVDWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHR 541
Query: 183 NYVFCCNFNPQSNLIVSGSFDESV 254
+ V +P + SG D ++
Sbjct: 542 SMVLSLAMSPDGRYMASGDEDGTI 565
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/84 (27%), Positives = 44/84 (52%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+WDV+TG+C++ H V ++ + DG + S DG +WD ++ +C+ L+ N
Sbjct: 525 LWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLM-GHN 583
Query: 437 PPVSFVKFSPNGKYILAATLDNTL 508
V + +S G + + + D T+
Sbjct: 584 SCVWSLSYSGEGSLLASGSADCTV 607
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/73 (26%), Positives = 37/73 (50%)
Frame = +1
Query: 487 GDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSK 666
G + +LWD G+C++ + GH++ + + G+++ SG ED + +W+L +
Sbjct: 517 GSSDKTVRLWDVQTGECVRIFIGHRS---MVLSLAMSPDGRYMASGDEDGTIMMWDLSTA 573
Query: 667 EIVQRLSGHTDTV 705
+ L GH V
Sbjct: 574 RCITPLMGHNSCV 586
Score = 46.0 bits (104), Expect = 3e-05
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 400
+WD+ T +C+ PL H+ V ++ ++ +GSL+ S S D ++WD S
Sbjct: 567 MWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTS 614
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/71 (35%), Positives = 33/71 (46%)
Frame = +2
Query: 293 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 472
L HS PV + F+ G ++SSS D R+W T L N PV +FSP G
Sbjct: 414 LLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANL-VCYKGHNYPVWDAQFSPFG 472
Query: 473 KYILAATLDNT 505
Y + + D T
Sbjct: 473 HYFASCSHDRT 483
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/75 (26%), Positives = 42/75 (56%)
Frame = +2
Query: 284 LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 463
++PL + +S V ++ + + I + S D R+WD +G+C++ I + +S + S
Sbjct: 492 IQPLRIMAGHLSDVDWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLS-LAMS 550
Query: 464 PNGKYILAATLDNTL 508
P+G+Y+ + D T+
Sbjct: 551 PDGRYMASGDEDGTI 565
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/69 (28%), Positives = 36/69 (52%)
Frame = +3
Query: 48 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 227
GH + D +S S S D+T ++W + + L+ + GH + V +++P N I
Sbjct: 458 GHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDV---DWHPNCNYI 514
Query: 228 VSGSFDESV 254
+GS D++V
Sbjct: 515 ATGSSDKTV 523
Score = 36.3 bits (80), Expect = 0.021
Identities = 18/68 (26%), Positives = 31/68 (45%)
Frame = +3
Query: 48 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 227
GH + +S ++S+S D T+++W L KGH+ V+ F+P +
Sbjct: 416 GHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYF 475
Query: 228 VSGSFDES 251
S S D +
Sbjct: 476 ASCSHDRT 483
Score = 34.7 bits (76), Expect = 0.064
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 487 GDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTG-GKWIVSGSEDNLVYIWNLQS 663
GD +WD S +C+ GH + C+++ S +G G + SGS D V +W++ S
Sbjct: 559 GDEDGTIMMWDLSTARCITPLMGHNS---CVWS-LSYSGEGSLLASGSADCTVKLWDVTS 614
Score = 33.9 bits (74), Expect = 0.11
Identities = 23/84 (27%), Positives = 34/84 (40%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+W + L H+ PV F+ G S S+D RIW Q L+ +
Sbjct: 444 LWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGH-- 501
Query: 437 PPVSFVKFSPNGKYILAATLDNTL 508
+S V + PN YI + D T+
Sbjct: 502 --LSDVDWHPNCNYIATGSSDKTV 523
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 610 WIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTACHP 726
+I +GS D V +W++Q+ E V+ GH VL A P
Sbjct: 513 YIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSP 551
Score = 31.9 bits (69), Expect = 0.45
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL-SSGKCLKTLKGHS 182
+W + + GH + +++S + L+ S S D T+K+W++ SS K K + +
Sbjct: 567 MWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKNG 626
Query: 183 N 185
N
Sbjct: 627 N 627
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 62.9 bits (146), Expect = 2e-10
Identities = 28/86 (32%), Positives = 46/86 (53%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
KIW T GH G++ + ++ D R +VS +D +KVW+L++GK L K H
Sbjct: 126 KIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHE 185
Query: 183 NYVFCCNFNPQSNLIVSGSFDESVGY 260
+ +F+P L+ +GS D +V +
Sbjct: 186 GQIQSLDFHPHEFLLATGSADRTVKF 211
Score = 57.6 bits (133), Expect = 8e-09
Identities = 26/84 (30%), Positives = 39/84 (46%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
K+W + K +T++GH+ V + S S D LK+W++ C+ T KGH+
Sbjct: 84 KLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHT 143
Query: 183 NYVFCCNFNPQSNLIVSGSFDESV 254
V F P +VSG D V
Sbjct: 144 RGVNVLRFTPDGRWVVSGGEDNIV 167
Score = 54.4 bits (125), Expect = 7e-08
Identities = 23/85 (27%), Positives = 43/85 (50%)
Frame = +1
Query: 472 KIYIGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 651
+ + G + + ++WD + C+ TY GH + F+ G+W+VSG EDN+V +W
Sbjct: 114 EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVL--RFT-PDGRWVVSGGEDNIVKVW 170
Query: 652 NLQSKEIVQRLSGHTDTVLCTACHP 726
+L + +++ H + HP
Sbjct: 171 DLTAGKLLTEFKSHEGQIQSLDFHP 195
Score = 52.0 bits (119), Expect = 4e-07
Identities = 21/72 (29%), Positives = 38/72 (52%)
Frame = +3
Query: 39 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 218
++ GH GI V + + L+ + + T+K+W+L K ++TL GH + +F+P
Sbjct: 54 SLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
Query: 219 NLIVSGSFDESV 254
SGS D ++
Sbjct: 114 EFFASGSLDTNL 125
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/86 (25%), Positives = 40/86 (46%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
IWD+R C+ H+ V+ + F DG +VS D + ++WD +G+ L T
Sbjct: 127 IWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLL-TEFKSHE 185
Query: 437 PPVSFVKFSPNGKYILAATLDNTLNY 514
+ + F P+ + + D T+ +
Sbjct: 186 GQIQSLDFHPHEFLLATGSADRTVKF 211
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLS 687
+LWD K ++T TGH++ CI +F G ++ SGS D + IW+++ K +
Sbjct: 84 KLWDLEEAKIVRTLTGHRSN--CISVDFHPFG-EFFASGSLDTNLKIWDIRKKGCIHTYK 140
Query: 688 GHT 696
GHT
Sbjct: 141 GHT 143
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/92 (22%), Positives = 43/92 (46%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+W + + L HS + +V F+ L+ + + G ++WD + ++TL +
Sbjct: 43 LWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRS 102
Query: 437 PPVSFVKFSPNGKYILAATLDNTLNYGTIAEE 532
+S V F P G++ + +LD L I ++
Sbjct: 103 NCIS-VDFHPFGEFFASGSLDTNLKIWDIRKK 133
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/78 (24%), Positives = 36/78 (46%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
K+W GK H+ I + + L+ + S D+T+K W+L + + + + +
Sbjct: 168 KVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPET 227
Query: 183 NYVFCCNFNPQSNLIVSG 236
V C +FNP ++ G
Sbjct: 228 AGVRCLSFNPDGKTVLCG 245
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/85 (18%), Positives = 36/85 (42%)
Frame = +1
Query: 472 KIYIGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 651
++ + G LW + + + GH + + + S + +G+ + +W
Sbjct: 30 RVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEV---LVAAGAASGTIKLW 86
Query: 652 NLQSKEIVQRLSGHTDTVLCTACHP 726
+L+ +IV+ L+GH + HP
Sbjct: 87 DLEEAKIVRTLTGHRSNCISVDFHP 111
Score = 32.3 bits (70), Expect = 0.34
Identities = 12/50 (24%), Positives = 27/50 (54%)
Frame = +3
Query: 90 SRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 239
SR++V+ +D + +W + + +L GHS+ + F+ L+ +G+
Sbjct: 29 SRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGA 78
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 62.9 bits (146), Expect = 2e-10
Identities = 28/86 (32%), Positives = 46/86 (53%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
KIW T GH G++ + ++ D R +VS +D +KVW+L++GK L K H
Sbjct: 126 KIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHE 185
Query: 183 NYVFCCNFNPQSNLIVSGSFDESVGY 260
+ +F+P L+ +GS D +V +
Sbjct: 186 GQIQSLDFHPHEFLLATGSADRTVKF 211
Score = 57.6 bits (133), Expect = 8e-09
Identities = 26/84 (30%), Positives = 39/84 (46%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
K+W + K +T++GH+ V + S S D LK+W++ C+ T KGH+
Sbjct: 84 KLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHT 143
Query: 183 NYVFCCNFNPQSNLIVSGSFDESV 254
V F P +VSG D V
Sbjct: 144 RGVNVLRFTPDGRWVVSGGEDNIV 167
Score = 54.4 bits (125), Expect = 7e-08
Identities = 23/85 (27%), Positives = 43/85 (50%)
Frame = +1
Query: 472 KIYIGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 651
+ + G + + ++WD + C+ TY GH + F+ G+W+VSG EDN+V +W
Sbjct: 114 EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVL--RFT-PDGRWVVSGGEDNIVKVW 170
Query: 652 NLQSKEIVQRLSGHTDTVLCTACHP 726
+L + +++ H + HP
Sbjct: 171 DLTAGKLLTEFKSHEGQIQSLDFHP 195
Score = 52.0 bits (119), Expect = 4e-07
Identities = 21/72 (29%), Positives = 38/72 (52%)
Frame = +3
Query: 39 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 218
++ GH GI V + + L+ + + T+K+W+L K ++TL GH + +F+P
Sbjct: 54 SLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
Query: 219 NLIVSGSFDESV 254
SGS D ++
Sbjct: 114 EFFASGSLDTNL 125
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/86 (25%), Positives = 40/86 (46%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
IWD+R C+ H+ V+ + F DG +VS D + ++WD +G+ L T
Sbjct: 127 IWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLL-TEFKSHE 185
Query: 437 PPVSFVKFSPNGKYILAATLDNTLNY 514
+ + F P+ + + D T+ +
Sbjct: 186 GQIQSLDFHPHEFLLATGSADRTVKF 211
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLS 687
+LWD K ++T TGH++ CI +F G ++ SGS D + IW+++ K +
Sbjct: 84 KLWDLEEAKIVRTLTGHRSN--CISVDFHPFG-EFFASGSLDTNLKIWDIRKKGCIHTYK 140
Query: 688 GHT 696
GHT
Sbjct: 141 GHT 143
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/92 (22%), Positives = 43/92 (46%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+W + + L HS + +V F+ L+ + + G ++WD + ++TL +
Sbjct: 43 LWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRS 102
Query: 437 PPVSFVKFSPNGKYILAATLDNTLNYGTIAEE 532
+S V F P G++ + +LD L I ++
Sbjct: 103 NCIS-VDFHPFGEFFASGSLDTNLKIWDIRKK 133
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/78 (24%), Positives = 36/78 (46%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
K+W GK H+ I + + L+ + S D+T+K W+L + + + + +
Sbjct: 168 KVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPET 227
Query: 183 NYVFCCNFNPQSNLIVSG 236
V C +FNP ++ G
Sbjct: 228 AGVRCLSFNPDGKTVLCG 245
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/85 (18%), Positives = 36/85 (42%)
Frame = +1
Query: 472 KIYIGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 651
++ + G LW + + + GH + + + S + +G+ + +W
Sbjct: 30 RVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEV---LVAAGAASGTIKLW 86
Query: 652 NLQSKEIVQRLSGHTDTVLCTACHP 726
+L+ +IV+ L+GH + HP
Sbjct: 87 DLEEAKIVRTLTGHRSNCISVDFHP 111
Score = 32.3 bits (70), Expect = 0.34
Identities = 12/50 (24%), Positives = 27/50 (54%)
Frame = +3
Query: 90 SRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 239
SR++V+ +D + +W + + +L GHS+ + F+ L+ +G+
Sbjct: 29 SRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGA 78
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 62.9 bits (146), Expect = 2e-10
Identities = 33/89 (37%), Positives = 54/89 (60%), Gaps = 5/89 (5%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK--- 173
++W G+ + GH + VA+S+D+R IVSAS D+T+K+W + G+C T+
Sbjct: 88 RLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWN-TLGECKYTISEGD 146
Query: 174 GHSNYVFCCNFNPQSNL--IVSGSFDESV 254
GH +V C F+P + + IVS S+D++V
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTV 175
Score = 54.4 bits (125), Expect = 7e-08
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Frame = +3
Query: 3 KIWGAYDGKFEKTIS---GHKMGISDVAWSSDSRL--IVSASDDKTLKVWELSSGKCLKT 167
K+W G+ + TIS GHK +S V +S ++ + IVSAS DKT+KVW L + K +
Sbjct: 130 KLWNTL-GECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNS 188
Query: 168 LKGHSNYVFCCNFNPQSNLIVSGSFD 245
L GHS Y+ +P +L SG D
Sbjct: 189 LVGHSGYLNTVAVSPDGSLCASGGKD 214
Score = 53.2 bits (122), Expect = 2e-07
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Frame = +2
Query: 248 ECWIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 427
E +WD+ TG+ + H+ V +V F+ D IVS+S D ++W+T G+C T+ +
Sbjct: 86 ELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTL-GECKYTISE 144
Query: 428 DDNPP--VSFVKFSPNG--KYILAATLDNTL 508
D VS V+FSPN I++A+ D T+
Sbjct: 145 GDGHKEWVSCVRFSPNTLVPTIVSASWDKTV 175
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/77 (31%), Positives = 43/77 (55%)
Frame = +3
Query: 24 GKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCN 203
G ++ ++GH + DV SSD + +S S D L++W+L++G+ + GH+ V
Sbjct: 53 GVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVA 112
Query: 204 FNPQSNLIVSGSFDESV 254
F+ + IVS S D ++
Sbjct: 113 FSTDNRQIVSASRDRTI 129
Score = 48.8 bits (111), Expect = 4e-06
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +2
Query: 263 DVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 442
D G + L HS V V + DG +S S+DG R+WD A+G+ + +
Sbjct: 49 DKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDV 108
Query: 443 VSFVKFSPNGKYILAATLDNTLN-YGTIAE 529
+S V FS + + I++A+ D T+ + T+ E
Sbjct: 109 LS-VAFSTDNRQIVSASRDRTIKLWNTLGE 137
Score = 48.8 bits (111), Expect = 4e-06
Identities = 28/94 (29%), Positives = 49/94 (52%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+W+++ K L HS ++ V + DGSL S DG+ +WD A G+ L +L +
Sbjct: 177 VWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSL--EAG 234
Query: 437 PPVSFVKFSPNGKYILAATLDNTLNYGTIAEENV 538
+ + FSPN +Y L A +N++ + ++V
Sbjct: 235 SIIHSLCFSPN-RYWLCAATENSIRIWDLESKSV 267
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
K+W + K ++ GH ++ VA S D L S D + +W+L+ GK L +L+ S
Sbjct: 176 KVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGS 235
Query: 183 NYVFCCNFNP 212
C F+P
Sbjct: 236 IIHSLC-FSP 244
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL--QSKEIVQR 681
+LWD + G+ + + GH K + FS T + IVS S D + +WN + K +
Sbjct: 88 RLWDLATGETTRRFVGH--TKDVLSVAFS-TDNRQIVSASRDRTIKLWNTLGECKYTISE 144
Query: 682 LSGHTDTVLCTACHP 726
GH + V C P
Sbjct: 145 GDGHKEWVSCVRFSP 159
Score = 35.5 bits (78), Expect = 0.036
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = +1
Query: 517 DYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHT 696
D S G + TGH + + + + G++ +SGS D + +W+L + E +R GHT
Sbjct: 49 DKSYGVAQRRLTGHSHFVEDVVLS---SDGQFALSGSWDGELRLWDLATGETTRRFVGHT 105
Query: 697 DTVLCTA 717
VL A
Sbjct: 106 KDVLSVA 112
Score = 34.7 bits (76), Expect = 0.064
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYT---GHKNEKYCIFANFSV-TGGKWIVSGSEDNLVYIWNLQSKEIV 675
+LW+ + G+C T + GHK C+ FS T IVS S D V +WNLQ+ ++
Sbjct: 130 KLWN-TLGECKYTISEGDGHKEWVSCV--RFSPNTLVPTIVSASWDKTVKVWNLQNCKLR 186
Query: 676 QRLSGHTDTVLCTACHP 726
L GH+ + A P
Sbjct: 187 NSLVGHSGYLNTVAVSP 203
Score = 33.9 bits (74), Expect = 0.11
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Frame = +3
Query: 87 DSRLIVSASDDKTLKVWEL-----SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 245
+S +IV+AS DK++ +W+L S G + L GHS++V + +SGS+D
Sbjct: 27 NSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWD 84
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 62.9 bits (146), Expect = 2e-10
Identities = 26/84 (30%), Positives = 40/84 (47%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
K+W + K + +GH+ S V + + S S D LK+W++ C++T KGHS
Sbjct: 83 KLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHS 142
Query: 183 NYVFCCNFNPQSNLIVSGSFDESV 254
+ F P +VSG D V
Sbjct: 143 RGISTIRFTPDGRWVVSGGLDNVV 166
Score = 62.5 bits (145), Expect = 3e-10
Identities = 30/86 (34%), Positives = 46/86 (53%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
KIW +T GH GIS + ++ D R +VS D +KVW+L++GK L K H
Sbjct: 125 KIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHE 184
Query: 183 NYVFCCNFNPQSNLIVSGSFDESVGY 260
+ +F+P L+ +GS D +V +
Sbjct: 185 GPIRSLDFHPLEFLLATGSADRTVKF 210
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/84 (29%), Positives = 45/84 (53%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+WDV K ++ H SAV F+ G + S S D +IWD C++T +
Sbjct: 84 LWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQT-YKGHS 142
Query: 437 PPVSFVKFSPNGKYILAATLDNTL 508
+S ++F+P+G+++++ LDN +
Sbjct: 143 RGISTIRFTPDGRWVVSGGLDNVV 166
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/86 (26%), Positives = 41/86 (47%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
IWD+R C++ HS +S + F DG +VS D + ++WD +G+ L +
Sbjct: 126 IWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEG 185
Query: 437 PPVSFVKFSPNGKYILAATLDNTLNY 514
P+ + F P + + D T+ +
Sbjct: 186 -PIRSLDFHPLEFLLATGSADRTVKF 210
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/80 (28%), Positives = 40/80 (50%)
Frame = +1
Query: 487 GDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSK 666
G + ++WD + C++TY GH I F+ G+W+VSG DN+V +W+L +
Sbjct: 118 GSSDANLKIWDIRKKGCIQTYKGHSRGISTI--RFT-PDGRWVVSGGLDNVVKVWDLTAG 174
Query: 667 EIVQRLSGHTDTVLCTACHP 726
+++ H + HP
Sbjct: 175 KLLHEFKFHEGPIRSLDFHP 194
Score = 44.8 bits (101), Expect = 6e-05
Identities = 17/72 (23%), Positives = 36/72 (50%)
Frame = +3
Query: 39 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 218
++ GH + VA+ S L+++ + +K+W++ K ++ GH + F+P
Sbjct: 53 SLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFG 112
Query: 219 NLIVSGSFDESV 254
+ SGS D ++
Sbjct: 113 EFLASGSSDANL 124
Score = 44.8 bits (101), Expect = 6e-05
Identities = 20/63 (31%), Positives = 35/63 (55%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLS 687
+LWD K ++ +TGH++ C F G +++ SGS D + IW+++ K +Q
Sbjct: 83 KLWDVEEAKMVRAFTGHRSN--CSAVEFHPFG-EFLASGSSDANLKIWDIRKKGCIQTYK 139
Query: 688 GHT 696
GH+
Sbjct: 140 GHS 142
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/84 (22%), Positives = 38/84 (45%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
K+W GK H+ I + + L+ + S D+T+K W+L + + + + + +
Sbjct: 167 KVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEA 226
Query: 183 NYVFCCNFNPQSNLIVSGSFDESV 254
V F+P + G D+S+
Sbjct: 227 TGVRSIKFHPDGRTLFCG-LDDSL 249
Score = 32.3 bits (70), Expect = 0.34
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +3
Query: 90 SRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 239
SRL ++ DD + +W + L +L GH++ V F+ L+++G+
Sbjct: 28 SRLFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFDSAEVLVLAGA 77
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/86 (18%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Frame = +1
Query: 472 KIYIGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCI-FANFSVTGGKWIVSGSEDNLVYI 648
+++I G LW + L + GH + + F + V +++G+ ++ +
Sbjct: 29 RLFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFDSAEVL----VLAGASSGVIKL 84
Query: 649 WNLQSKEIVQRLSGHTDTVLCTACHP 726
W+++ ++V+ +GH HP
Sbjct: 85 WDVEEAKMVRAFTGHRSNCSAVEFHP 110
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 62.9 bits (146), Expect = 2e-10
Identities = 33/89 (37%), Positives = 54/89 (60%), Gaps = 5/89 (5%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK--- 173
++W G+ + GH + VA+S+D+R IVSAS D+T+K+W + G+C T+
Sbjct: 88 RLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWN-TLGECKYTISEAD 146
Query: 174 GHSNYVFCCNFNPQSNL--IVSGSFDESV 254
GH +V C F+P + + IVS S+D++V
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTV 175
Score = 56.4 bits (130), Expect = 2e-08
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Frame = +3
Query: 3 KIWGAYDGKFEKTIS---GHKMGISDVAWSSDSRL--IVSASDDKTLKVWELSSGKCLKT 167
K+W G+ + TIS GHK +S V +S ++ + IVSAS DKT+KVW L + K T
Sbjct: 130 KLWNTL-GECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNT 188
Query: 168 LKGHSNYVFCCNFNPQSNLIVSGSFD 245
L GHS Y+ +P +L SG D
Sbjct: 189 LAGHSGYLNTVAVSPDGSLCASGGKD 214
Score = 52.8 bits (121), Expect = 2e-07
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Frame = +2
Query: 248 ECWIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 427
E +WD+ TG+ + H+ V +V F+ D IVS+S D ++W+T G+C T+ +
Sbjct: 86 ELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTL-GECKYTISE 144
Query: 428 DDNPP--VSFVKFSPNG--KYILAATLDNTL 508
D VS V+FSPN I++A+ D T+
Sbjct: 145 ADGHKEWVSCVRFSPNTLVPTIVSASWDKTV 175
Score = 52.0 bits (119), Expect = 4e-07
Identities = 24/77 (31%), Positives = 43/77 (55%)
Frame = +3
Query: 24 GKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCN 203
G ++ ++GH + DV SSD + +S S D L++W+L++G+ + GH+ V
Sbjct: 53 GVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVA 112
Query: 204 FNPQSNLIVSGSFDESV 254
F+ + IVS S D ++
Sbjct: 113 FSTDNRQIVSASRDRTI 129
Score = 49.2 bits (112), Expect = 3e-06
Identities = 28/94 (29%), Positives = 49/94 (52%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+W+++ K L HS ++ V + DGSL S DG+ +WD A G+ L +L +
Sbjct: 177 VWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSL--EAG 234
Query: 437 PPVSFVKFSPNGKYILAATLDNTLNYGTIAEENV 538
+ + FSPN +Y L A +N++ + ++V
Sbjct: 235 SIIHSLCFSPN-RYWLCAATENSIRIWDLESKSV 267
Score = 48.0 bits (109), Expect = 6e-06
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +2
Query: 263 DVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 442
D G + + HS V V + DG +S S+DG R+WD A+G+ + +
Sbjct: 49 DKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDV 108
Query: 443 VSFVKFSPNGKYILAATLDNTLN-YGTIAE 529
+S V FS + + I++A+ D T+ + T+ E
Sbjct: 109 LS-VAFSTDNRQIVSASRDRTIKLWNTLGE 137
Score = 44.4 bits (100), Expect = 8e-05
Identities = 23/70 (32%), Positives = 36/70 (51%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
K+W + K T++GH ++ VA S D L S D + +W+L+ GK L +L+ S
Sbjct: 176 KVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGS 235
Query: 183 NYVFCCNFNP 212
C F+P
Sbjct: 236 IIHSLC-FSP 244
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL--QSKEIVQR 681
+LWD + G+ + + GH K + FS T + IVS S D + +WN + K +
Sbjct: 88 RLWDLATGESTRRFVGH--TKDVLSVAFS-TDNRQIVSASRDRTIKLWNTLGECKYTISE 144
Query: 682 LSGHTDTVLCTACHP 726
GH + V C P
Sbjct: 145 ADGHKEWVSCVRFSP 159
Score = 35.9 bits (79), Expect = 0.028
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYT---GHKNEKYCIFANFSV-TGGKWIVSGSEDNLVYIWNLQSKEIV 675
+LW+ + G+C T + GHK C+ FS T IVS S D V +WNLQ+ ++
Sbjct: 130 KLWN-TLGECKYTISEADGHKEWVSCV--RFSPNTLVPTIVSASWDKTVKVWNLQNCKLR 186
Query: 676 QRLSGHTDTVLCTACHP 726
L+GH+ + A P
Sbjct: 187 NTLAGHSGYLNTVAVSP 203
Score = 35.5 bits (78), Expect = 0.036
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = +1
Query: 517 DYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHT 696
D S G + TGH + + + + G++ +SGS D + +W+L + E +R GHT
Sbjct: 49 DKSYGVAQRRMTGHSHFVQDVVLS---SDGQFALSGSWDGELRLWDLATGESTRRFVGHT 105
Query: 697 DTVLCTA 717
VL A
Sbjct: 106 KDVLSVA 112
Score = 33.1 bits (72), Expect = 0.19
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Frame = +3
Query: 39 TISGHKMGISDVAWSSD-SRLIVSASDDKTLKVWEL-----SSGKCLKTLKGHSNYVFCC 200
T+ H ++ +A D S +IV++S DK++ +W+L S G + + GHS++V
Sbjct: 10 TMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDV 69
Query: 201 NFNPQSNLIVSGSFD 245
+ +SGS+D
Sbjct: 70 VLSSDGQFALSGSWD 84
Score = 28.3 bits (60), Expect = 5.5
Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Frame = +2
Query: 257 IWDVRTGKC---LKPLPAHSDPVSAVHFNRDGSL--IVSSSYDGLCRIWDTASGQCLKTL 421
+W+ G+C + H + VS V F+ + + IVS+S+D ++W+ + + TL
Sbjct: 131 LWNT-LGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTL 189
Query: 422 IDDDNPPVSFVKFSPNGKYILAATLDNTLNYGTIAE 529
++ V SP+G + D + +AE
Sbjct: 190 AGHSG-YLNTVAVSPDGSLCASGGKDGVILLWDLAE 224
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 62.5 bits (145), Expect = 3e-10
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +1
Query: 499 QHTQLWDYS-RGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIV 675
Q LWD + K ++GH+ KY I + F +I SGSED+ VYIWNL++ + +
Sbjct: 419 QEIHLWDLAGEWKQPLKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPL 478
Query: 676 QRLSGHTDTVLCTACHP 726
+ LSGH+ TV C + +P
Sbjct: 479 EVLSGHSMTVNCVSWNP 495
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Frame = +3
Query: 45 SGHKMG---ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 215
SGH+ I DS I S S+D + +W L + K L+ L GHS V C ++NP+
Sbjct: 437 SGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPK 496
Query: 216 S-NLIVSGSFDESV 254
+ ++ S S D+++
Sbjct: 497 NPRMLASASDDQTI 510
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Frame = +3
Query: 6 IWGAYDG---KFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKG 176
IW D + + T+ H+ +S V+WS D +++ + + LK+W++ +G L+ G
Sbjct: 250 IWKVLDDNKVELKHTLESHQNPVSFVSWSPDDTKLLTCGNAEVLKLWDVDTG-VLRHTFG 308
Query: 177 HSNYVF---CCNFNPQSNLIVSGSFDESVGYGM 266
++N F C + P S +V GS D G M
Sbjct: 309 NNNTGFTVSSCAWFPDSTRLVCGSSDPERGIVM 341
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/45 (37%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWS-SDSRLIVSASDDKTLKVW 137
IW + K + +SGH M ++ V+W+ + R++ SASDD+T+++W
Sbjct: 469 IWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
Score = 35.5 bits (78), Expect = 0.036
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Frame = +2
Query: 224 NCIRQFR*ECWIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 403
+ + ++ C D + ++ L AH + V V F+ G + ++S D IW
Sbjct: 197 DAVSLYKDHCCGRDQIPSETVQILVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDD 256
Query: 404 QC--LKTLIDDDNPPVSFVKFSPNGKYIL 484
LK ++ PVSFV +SP+ +L
Sbjct: 257 NKVELKHTLESHQNPVSFVSWSPDDTKLL 285
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +2
Query: 248 ECWIWDVRTGKCLKPLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIW 388
+ +IW+++ K L+ L HS V+ V +N ++ ++ S+S D RIW
Sbjct: 466 QVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +3
Query: 51 HKMGISDVAWSSDSRLIVSASDDKTLKVWE-LSSGKC-LK-TLKGHSNYVFCCNFNPQSN 221
HK + V +S+ + + +AS D T +W+ L K LK TL+ H N V +++P
Sbjct: 223 HKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSPDDT 282
Query: 222 LIVS 233
+++
Sbjct: 283 KLLT 286
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 62.5 bits (145), Expect = 3e-10
Identities = 29/87 (33%), Positives = 49/87 (56%)
Frame = +2
Query: 248 ECWIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 427
+ ++W + G LP H D VS + F+ DG L+ S DG+ +I+D +SG LK ++D
Sbjct: 94 KAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSG-TLKCVLD 152
Query: 428 DDNPPVSFVKFSPNGKYILAATLDNTL 508
+ +V++ P G +LA + D +L
Sbjct: 153 GPGAGIEWVRWHPRGHIVLAGSEDCSL 179
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSN 185
+W A + SGH + ++ ++ D +LI + SDD +L VW + + + +KGH
Sbjct: 181 MWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPY 240
Query: 186 Y---VFCCNFNPQSNLIVSGSFDESV 254
+ + C + N S+L +SGS D SV
Sbjct: 241 HTEGLTCLDINSNSSLAISGSKDGSV 266
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/84 (29%), Positives = 40/84 (47%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
+I+ A G + + G GI V W ++++ S+D +L +W L GH+
Sbjct: 138 QIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWNADKEAYLNMFSGHN 197
Query: 183 NYVFCCNFNPQSNLIVSGSFDESV 254
V C +F P LI +GS D S+
Sbjct: 198 LNVTCGDFTPDGKLICTGSDDASL 221
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/83 (26%), Positives = 46/83 (55%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSN 185
+W +G + + GHK +S +A+S D +L+ S D +++++ SSG L G
Sbjct: 97 LWKIGNGDWAAELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGA 156
Query: 186 YVFCCNFNPQSNLIVSGSFDESV 254
+ ++P+ +++++GS D S+
Sbjct: 157 GIEWVRWHPRGHIVLAGSEDCSL 179
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/70 (25%), Positives = 36/70 (51%)
Frame = +3
Query: 42 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 221
I H+ G++ + W S+ + + + T+ +W+ G C+ T GH + V + + ++
Sbjct: 324 ICEHEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTD 383
Query: 222 LIVSGSFDES 251
IVS S D +
Sbjct: 384 FIVSVSVDNT 393
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +1
Query: 544 TYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTA 717
T+TGHK E Y + S T + +G D+ ++W + + + L GH D+V C A
Sbjct: 65 TFTGHKGELYALAC--SPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLA 120
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +3
Query: 39 TISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 215
T +GHK + +A S +D+ L+ + D +W++ +G L GH + V C F+
Sbjct: 65 TFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYD 124
Query: 216 SNLIVSGSFD 245
L+ SG D
Sbjct: 125 GQLLASGGLD 134
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/59 (30%), Positives = 34/59 (57%)
Frame = +3
Query: 51 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 227
H G++ + +S+S L +S S D ++ + + +GK + +L H++ V C F+P S I
Sbjct: 241 HTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATI 299
Score = 36.7 bits (81), Expect = 0.016
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 406
IWD G C+ H D V A+ + + IVS S D R+++++ Q
Sbjct: 354 IWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNTARVFESSEFQ 403
Score = 36.3 bits (80), Expect = 0.021
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +1
Query: 616 VSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTACHPT 729
+SGS+D V+I N+ + ++V L+ HTD+V C P+
Sbjct: 258 ISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPS 295
Score = 34.3 bits (75), Expect = 0.084
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +1
Query: 511 LWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSG 690
+W+ + L ++GH C +F+ GK I +GS+D + +WN ++ E + + G
Sbjct: 181 MWNADKEAYLNMFSGHNLNVTC--GDFT-PDGKLICTGSDDASLIVWNPKTCESIHIVKG 237
Query: 691 H 693
H
Sbjct: 238 H 238
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/83 (22%), Positives = 39/83 (46%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
IWD++ + + H + V+++ + + + +G IWD+ G C+ T
Sbjct: 313 IWDLQHSTP-RFICEHEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHT-YHGHQ 370
Query: 437 PPVSFVKFSPNGKYILAATLDNT 505
V + S N +I++ ++DNT
Sbjct: 371 DAVQAISVSTNTDFIVSVSVDNT 393
Score = 32.3 bits (70), Expect = 0.34
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELS 146
IW + G T GH+ + ++ S+++ IVS S D T +V+E S
Sbjct: 354 IWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNTARVFESS 400
Score = 31.5 bits (68), Expect = 0.59
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 604 GKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLC 711
G +++GSED +++WN + + SGH V C
Sbjct: 167 GHIVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTC 202
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 511 LWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 651
+WD G C+ TY GH++ I + T +IVS S DN ++
Sbjct: 354 IWDSLLGNCVHTYHGHQDAVQAISVS---TNTDFIVSVSVDNTARVF 397
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = +2
Query: 254 WIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 391
W+W+ L H+ V+ F DG LI + S D +W+
Sbjct: 180 WMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWN 225
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR---IWD 391
I ++ TGK + L +H+D V V F+ + I ++ G+ + IWD
Sbjct: 268 IVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWD 315
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 62.5 bits (145), Expect = 3e-10
Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +3
Query: 48 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNL 224
GH + D+AWS DS L++SAS DKT+++W +CL H+NYV C FNP N
Sbjct: 270 GHTGDVLDLAWS-DSNLLLSASKDKTVRLWRTGCDQCLHVFH-HNNYVTCVEFNPVNKNN 327
Query: 225 IVSGSFD 245
SGS D
Sbjct: 328 FASGSID 334
Score = 35.1 bits (77), Expect = 0.048
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +2
Query: 338 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP-NGKYILAATLDNTLNY 514
D +L++S+S D R+W T QCL + N V+ V+F+P N + ++D
Sbjct: 282 DSNLLLSASKDKTVRLWRTGCDQCLH--VFHHNNYVTCVEFNPVNKNNFASGSIDGKARI 339
Query: 515 GTIAEENV 538
++EE V
Sbjct: 340 WGLSEERV 347
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +1
Query: 472 KIYIGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 651
K+ + + + H +L S ++ GHK + + + FS GK++ +G ED +V IW
Sbjct: 172 KVKVKTNKKSHVEL---SAAYMVQKINGHKGKIWTL--KFS-PDGKYLATGGEDGVVKIW 225
Query: 652 NL 657
+
Sbjct: 226 RI 227
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +3
Query: 42 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELS 146
I+GHK I + +S D + + + +D +K+W ++
Sbjct: 194 INGHKGKIWTLKFSPDGKYLATGGEDGVVKIWRIT 228
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 62.1 bits (144), Expect = 4e-10
Identities = 29/86 (33%), Positives = 46/86 (53%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
++W +T GH GIS + +S D R +VS D +KVW+L++GK L K H
Sbjct: 74 RVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHE 133
Query: 183 NYVFCCNFNPQSNLIVSGSFDESVGY 260
+ +F+P L+ +GS D +V +
Sbjct: 134 GPIRSLDFHPLEFLLATGSADRTVKF 159
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/84 (29%), Positives = 40/84 (47%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
K+W + K + +GH+ S V + + S S D L+VW+ C++T KGH+
Sbjct: 32 KLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHT 91
Query: 183 NYVFCCNFNPQSNLIVSGSFDESV 254
+ F+P +VSG D V
Sbjct: 92 RGISTIEFSPDGRWVVSGGLDNVV 115
Score = 58.8 bits (136), Expect = 3e-09
Identities = 26/84 (30%), Positives = 45/84 (53%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+WD+ K ++ H SAV F+ G + S S D R+WDT C++T
Sbjct: 33 LWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQT-YKGHT 91
Query: 437 PPVSFVKFSPNGKYILAATLDNTL 508
+S ++FSP+G+++++ LDN +
Sbjct: 92 RGISTIEFSPDGRWVVSGGLDNVV 115
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/86 (24%), Positives = 41/86 (47%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+WD R C++ H+ +S + F+ DG +VS D + ++WD +G+ L +
Sbjct: 75 VWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEG 134
Query: 437 PPVSFVKFSPNGKYILAATLDNTLNY 514
P+ + F P + + D T+ +
Sbjct: 135 -PIRSLDFHPLEFLLATGSADRTVKF 159
Score = 49.2 bits (112), Expect = 3e-06
Identities = 24/80 (30%), Positives = 40/80 (50%)
Frame = +1
Query: 487 GDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSK 666
G + ++WD + C++TY GH I FS G+W+VSG DN+V +W+L +
Sbjct: 67 GSSDTNLRVWDTRKKGCIQTYKGHTRGISTI--EFS-PDGRWVVSGGLDNVVKVWDLTAG 123
Query: 667 EIVQRLSGHTDTVLCTACHP 726
+++ H + HP
Sbjct: 124 KLLHEFKCHEGPIRSLDFHP 143
Score = 47.2 bits (107), Expect = 1e-05
Identities = 18/72 (25%), Positives = 38/72 (52%)
Frame = +3
Query: 39 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 218
++ GH + VA++S+ L+++ + +K+W+L K ++ GH + F+P
Sbjct: 2 SLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFG 61
Query: 219 NLIVSGSFDESV 254
+ SGS D ++
Sbjct: 62 EFLASGSSDTNL 73
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLS 687
+LWD K ++ +TGH++ C F G +++ SGS D + +W+ + K +Q
Sbjct: 32 KLWDLEESKMVRAFTGHRSN--CSAVEFHPFG-EFLASGSSDTNLRVWDTRKKGCIQTYK 88
Query: 688 GHT 696
GHT
Sbjct: 89 GHT 91
Score = 34.7 bits (76), Expect = 0.064
Identities = 19/81 (23%), Positives = 35/81 (43%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
K+W GK H+ I + + L+ + S D+T+K W+L + + + T + +
Sbjct: 116 KVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEA 175
Query: 183 NYVFCCNFNPQSNLIVSGSFD 245
V F+P + G D
Sbjct: 176 TGVRAIAFHPDGQTLFCGLDD 196
Score = 29.5 bits (63), Expect = 2.4
Identities = 8/38 (21%), Positives = 21/38 (55%)
Frame = +1
Query: 613 IVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTACHP 726
+++G+ ++ +W+L+ ++V+ +GH HP
Sbjct: 22 VLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHP 59
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/82 (23%), Positives = 35/82 (42%)
Frame = +1
Query: 481 IGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ 660
+ G + ++WD + GK L + H+ + +F + +GS D V W+L+
Sbjct: 107 VSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSL--DFHPLEFL-LATGSADRTVKFWDLE 163
Query: 661 SKEIVQRLSGHTDTVLCTACHP 726
+ E++ V A HP
Sbjct: 164 TFELIGTTRPEATGVRAIAFHP 185
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 61.7 bits (143), Expect = 5e-10
Identities = 30/80 (37%), Positives = 44/80 (55%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSN 185
IW D T+ GHK I V +S+ + +++AS DKT+K+W +S G CLKT +GH++
Sbjct: 525 IWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTS 584
Query: 186 YVFCCNFNPQSNLIVSGSFD 245
V +F VS D
Sbjct: 585 SVLRASFITDGTQFVSCGAD 604
Score = 52.0 bits (119), Expect = 4e-07
Identities = 23/81 (28%), Positives = 39/81 (48%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
KIW DG KT GH + ++ +D VS D LK+W +++ +C+ T H
Sbjct: 566 KIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHE 625
Query: 183 NYVFCCNFNPQSNLIVSGSFD 245
+ V+ ++ +I +G D
Sbjct: 626 DKVWALAVGKKTEMIATGGGD 646
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
++W K ++ GH+ + +A + L+ +A D+ + VW++ G C +GH
Sbjct: 85 RVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHK 144
Query: 183 NYVFCCNFNPQS--NLIVSGSFDESV 254
V F+P S N+++SGS D +V
Sbjct: 145 GVVSSILFHPDSNKNILISGSDDATV 170
Score = 48.4 bits (110), Expect = 5e-06
Identities = 22/78 (28%), Positives = 39/78 (50%)
Frame = +3
Query: 21 DGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCC 200
D + TI G ++ +A S D +L+ SA + ++VW+L + KC+++ KGH V
Sbjct: 49 DSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGM 108
Query: 201 NFNPQSNLIVSGSFDESV 254
+ L+ + D V
Sbjct: 109 ACHASGGLLATAGADRKV 126
Score = 48.0 bits (109), Expect = 6e-06
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 418
IW + G CLK H+ V F DG+ VS DGL ++W+ + +C+ T
Sbjct: 567 IWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIAT 620
Score = 47.6 bits (108), Expect = 8e-06
Identities = 21/76 (27%), Positives = 39/76 (51%)
Frame = +3
Query: 27 KFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF 206
K ++ H I+ VA + + L+ + S+D+T +W L + TLKGH +F F
Sbjct: 490 KTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEF 549
Query: 207 NPQSNLIVSGSFDESV 254
+ +++ S D++V
Sbjct: 550 STVDQCVMTASGDKTV 565
Score = 46.8 bits (106), Expect = 1e-05
Identities = 24/70 (34%), Positives = 36/70 (51%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLS 687
++W S G CLKT+ GH + + A+F +T G VS D L+ +WN+ + E +
Sbjct: 566 KIWAISDGSCLKTFEGHTSS--VLRASF-ITDGTQFVSCGADGLLKLWNVNTSECIATYD 622
Query: 688 GHTDTVLCTA 717
H D V A
Sbjct: 623 QHEDKVWALA 632
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Frame = +3
Query: 42 ISGHK---MGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 212
++GHK + + SS + LIV+ S DKT+++W +S C+ GH+ + F
Sbjct: 397 LAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAK 456
Query: 213 QS-NLIVSGSFDESV 254
+S + VSGS D ++
Sbjct: 457 KSFSFFVSGSGDRTL 471
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/73 (28%), Positives = 34/73 (46%)
Frame = +1
Query: 499 QHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQ 678
+ +++D + C GHK + S +G IV+GS+D V +WN SK +
Sbjct: 381 EEVRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIG 440
Query: 679 RLSGHTDTVLCTA 717
+GH +L A
Sbjct: 441 VGTGHNGDILAVA 453
Score = 41.5 bits (93), Expect = 6e-04
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 2/121 (1%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+WD+ T KC++ H PV + + G L+ ++ D +WD G C
Sbjct: 86 VWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTH-YFRGHK 144
Query: 437 PPVSFVKFSP--NGKYILAATLDNTLNYGTIAEENV*RHIRDTRTKNIVSLPTLVSLAGS 610
VS + F P N +++ + D T+ + +N + K+ S T ++L+
Sbjct: 145 GVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHF-SAVTSIALSED 203
Query: 611 G 613
G
Sbjct: 204 G 204
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSR--LIVSASDDKTLKVWELSS----GKCLKT 167
+W G GHK +S + + DS +++S SDD T++VW+L++ KCL
Sbjct: 128 VWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAI 187
Query: 168 LKGHSNYVFCCNFNPQSNLIVSGSFDESV 254
++ H + V + + S D+ V
Sbjct: 188 MEKHFSAVTSIALSEDGLTLFSAGRDKVV 216
Score = 34.7 bits (76), Expect = 0.064
Identities = 21/84 (25%), Positives = 37/84 (44%)
Frame = +1
Query: 475 IYIGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 654
++ G RQ ++WD KC++++ GH+ + + S GG +G+ D V +W+
Sbjct: 75 LFSAGHSRQ-IRVWDLETLKCIRSWKGHEGPVMGMACHAS--GGLLATAGA-DRKVLVWD 130
Query: 655 LQSKEIVQRLSGHTDTVLCTACHP 726
+ GH V HP
Sbjct: 131 VDGGFCTHYFRGHKGVVSSILFHP 154
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 511 LWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWI-VSGSEDNLVYIWNLQSK 666
+WD G C + GHK I F K I +SGS+D V +W+L +K
Sbjct: 128 VWDVDGGFCTHYFRGHKGVVSSIL--FHPDSNKNILISGSDDATVRVWDLNAK 178
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = +2
Query: 257 IWDVRTG----KCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 421
+WD+ KCL + H V+++ + DG + S+ D + +WD C T+
Sbjct: 172 VWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHDYSCKATV 230
Score = 31.9 bits (69), Expect = 0.45
Identities = 18/72 (25%), Positives = 31/72 (43%)
Frame = +2
Query: 293 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 472
L H + +V F+ ++++S D +IW + G CLKT + V F +G
Sbjct: 537 LKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKT-FEGHTSSVLRASFITDG 595
Query: 473 KYILAATLDNTL 508
++ D L
Sbjct: 596 TQFVSCGADGLL 607
Score = 31.5 bits (68), Expect = 0.59
Identities = 15/61 (24%), Positives = 29/61 (47%)
Frame = +1
Query: 475 IYIGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 654
+ + G + +LW+ + C+ TGH + + F+ + VSGS D + +W+
Sbjct: 418 LIVTGSKDKTVRLWNATSKSCIGVGTGHNGD--ILAVAFAKKSFSFFVSGSGDRTLKVWS 475
Query: 655 L 657
L
Sbjct: 476 L 476
Score = 31.5 bits (68), Expect = 0.59
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDS-RLIVSASDDKTLKVWEL 143
++W A +GH I VA++ S VS S D+TLKVW L
Sbjct: 429 RLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSL 476
Score = 31.5 bits (68), Expect = 0.59
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 388
+W+V T +C+ H D V A+ + +I + D + +W
Sbjct: 609 LWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLW 652
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +2
Query: 248 ECWIWDVRTGKCLKPLPAHSDPVSAVH--FNRDGS-LIVSSSYDGLCRIWDTASGQCL 412
E ++DV T C L H + V ++ + G+ LIV+ S D R+W+ S C+
Sbjct: 382 EVRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCI 439
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +1
Query: 544 TYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVL 708
T GHK + + FS T + +++ S D V IW + ++ GHT +VL
Sbjct: 536 TLKGHKRRIFSV--EFS-TVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVL 587
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/60 (20%), Positives = 29/60 (48%)
Frame = +2
Query: 293 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 472
+ SD ++A+ + D L+ S+ + R+WD + +C+++ + P + + G
Sbjct: 56 IEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGG 115
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = +1
Query: 607 KWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTACH 723
K + S + +W+L++ + ++ GH V+ ACH
Sbjct: 73 KLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACH 111
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 61.7 bits (143), Expect = 5e-10
Identities = 29/73 (39%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = +3
Query: 39 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-Q 215
++ GH I D++WS S+L++S+S DKT+++W++ + CLK L H++YV C F+P
Sbjct: 501 SLKGHLDAILDLSWSK-SQLLLSSSMDKTVRLWDIETKTCLK-LFAHNDYVTCIQFSPVD 558
Query: 216 SNLIVSGSFDESV 254
N +SGS D +
Sbjct: 559 ENYFLSGSLDAKI 571
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +2
Query: 293 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP-N 469
L H D + + +++ L++SSS D R+WD + CLK +D V+ ++FSP +
Sbjct: 502 LKGHLDAILDLSWSKS-QLLLSSSMDKTVRLWDIETKTCLKLFAHNDY--VTCIQFSPVD 558
Query: 470 GKYILAATLDNTLNYGTIAEENV 538
Y L+ +LD + +I + +V
Sbjct: 559 ENYFLSGSLDAKIRIWSIQDRHV 581
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/84 (26%), Positives = 41/84 (48%)
Frame = +1
Query: 472 KIYIGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 651
++ + + + +LWD CLK + H + CI FS + +SGS D + IW
Sbjct: 518 QLLLSSSMDKTVRLWDIETKTCLKLFA-HNDYVTCI--QFSPVDENYFLSGSLDAKIRIW 574
Query: 652 NLQSKEIVQRLSGHTDTVLCTACH 723
++Q + +V+ H ++ AC+
Sbjct: 575 SIQDRHVVEWSDLH--EMVTAACY 596
Score = 38.3 bits (85), Expect = 0.005
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 433
+WD+ T CLK L AH+D V+ + F+ D + +S S D RIW ++ D
Sbjct: 531 LWDIETKTCLK-LFAHNDYVTCIQFSPVDENYFLSGSLDAKIRIWSIQDRHVVEW--SDL 587
Query: 434 NPPVSFVKFSPNGK 475
+ V+ ++P+G+
Sbjct: 588 HEMVTAACYTPDGQ 601
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 547 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 651
+ G +N + A++S GK+I+ SED+ VY+W
Sbjct: 676 FKGFRNTCSQLSASYS-QDGKYIICASEDSQVYLW 709
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 61.3 bits (142), Expect = 6e-10
Identities = 28/73 (38%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = +3
Query: 39 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-Q 215
+ +GH + D++WS S+L++S+S DKT+++W++ + CLK L H++YV C FNP
Sbjct: 514 SFTGHLDDVLDLSWSR-SQLLLSSSMDKTVRLWDIETQSCLK-LFAHNDYVTCVQFNPLD 571
Query: 216 SNLIVSGSFDESV 254
+ +SGS D +
Sbjct: 572 EDYFISGSLDAKI 584
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 433
+WD+ T CLK L AH+D V+ V FN D +S S D RIW+ ++ Q ++ +D
Sbjct: 544 LWDIETQSCLK-LFAHNDYVTCVQFNPLDEDYFISGSLDAKIRIWNISNRQVVEW--NDL 600
Query: 434 NPPVSFVKFSPNGKYILAATLD 499
V+ V ++P+G+ +++
Sbjct: 601 KEMVTAVCYTPDGQAAFVGSIN 622
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +2
Query: 302 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP-NGKY 478
H D V + ++R L++SSS D R+WD + CLK +D V+ V+F+P + Y
Sbjct: 518 HLDDVLDLSWSRS-QLLLSSSMDKTVRLWDIETQSCLKLFAHNDY--VTCVQFNPLDEDY 574
Query: 479 ILAATLDNTLNYGTIAEENV 538
++ +LD + I+ V
Sbjct: 575 FISGSLDAKIRIWNISNRQV 594
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/69 (24%), Positives = 36/69 (52%)
Frame = +1
Query: 472 KIYIGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 651
++ + + + +LWD CLK + H + C+ F+ + +SGS D + IW
Sbjct: 531 QLLLSSSMDKTVRLWDIETQSCLKLFA-HNDYVTCV--QFNPLDEDYFISGSLDAKIRIW 587
Query: 652 NLQSKEIVQ 678
N+ ++++V+
Sbjct: 588 NISNRQVVE 596
Score = 32.3 bits (70), Expect = 0.34
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +1
Query: 538 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTA 717
++ + G KN + A+++V K IV SED+ VY+W + + ++G +CT+
Sbjct: 685 VQKFRGFKNMNSQMTASYTVDA-KHIVCASEDSQVYVWKHEEPRL--GITGRKTVTMCTS 741
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 60.9 bits (141), Expect = 8e-10
Identities = 28/77 (36%), Positives = 49/77 (63%), Gaps = 3/77 (3%)
Frame = +3
Query: 33 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL-KGHSNYVFCCNFN 209
E+ + GH+ ++ +AW+S+ L++S SDD + +W SS K L ++ GH+ +FC F
Sbjct: 43 EQELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFV 102
Query: 210 PQSN--LIVSGSFDESV 254
P+++ L+VSG+ D V
Sbjct: 103 PETSDELVVSGAGDAEV 119
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 541 KTYTGHKNEKYCIF-ANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTA 717
+ Y GH N I A+F G++I SGS+D +IW Q+ +++ L G + C
Sbjct: 611 RRYVGHCNVGTDIKQASFLGQRGEYIASGSDDGRWFIWEKQTGRLMKVLVGDESVLNCIQ 670
Query: 718 CHP 726
CHP
Sbjct: 671 CHP 673
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 574 CIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRL-SGHTDTVLCTACHP 726
C+ A + G ++SGS+D + IWN S++++ + +GHT + CT P
Sbjct: 52 CVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVP 103
Score = 36.3 bits (80), Expect = 0.021
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3
Query: 99 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 254
I S SDD +WE +G+ +K L G + + C +P +++ + D ++
Sbjct: 636 IASGSDDGRWFIWEKQTGRLMKVLVGDESVLNCIQCHPFDSVVATSGIDNTI 687
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +2
Query: 293 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 466
L H V+A+ +N +GSL++S S D IW+ +S + L ++ + KF P
Sbjct: 46 LEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVP 103
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 254 WIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD-TAS 400
+IW+ +TG+ +K L ++ + + S++ +S D +IW TAS
Sbjct: 646 FIWEKQTGRLMKVLVGDESVLNCIQCHPFDSVVATSGIDNTIKIWSPTAS 695
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 60.9 bits (141), Expect = 8e-10
Identities = 31/88 (35%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 KIW--GAYDGKFEKTISGHKMGISDVAW--SSDSRLIVSASDDKTLKVWELSSGKCLKTL 170
KIW G+ D F T+ H G++ V + D +++ SDD T KVW+ + C++TL
Sbjct: 168 KIWNLGSPDPNF--TLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL 225
Query: 171 KGHSNYVFCCNFNPQSNLIVSGSFDESV 254
+GH++ V +F+P+ +I++GS D +V
Sbjct: 226 EGHTHNVSAVSFHPELPIIITGSEDGTV 253
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = +3
Query: 36 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG-KCLKTLKGHSNYVFCCNFNP 212
K H I VA ++S+SDD +K+W+ G C + +GHS+YV FNP
Sbjct: 93 KVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNP 152
Query: 213 Q-SNLIVSGSFDESV 254
+ +N S S D ++
Sbjct: 153 KDTNTFASASLDRTI 167
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 421
+WD +T C++ L H+ VSAV F+ + +I++ S DG RIW + + TL
Sbjct: 213 VWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWHATTYRLENTL 267
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = +1
Query: 598 TGGK--WIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTACHP 726
TGG ++++GS+D+ +W+ Q+K VQ L GHT V + HP
Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHP 239
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/73 (24%), Positives = 37/73 (50%)
Frame = +1
Query: 511 LWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSG 690
+W+Y +K++ E A F + +W+V+G++D + ++N + + ++
Sbjct: 41 IWNYQTQTMVKSFD--VTELPVRSAKF-IARKQWVVAGADDMFIRVYNYNTMDKIKVFEA 97
Query: 691 HTDTVLCTACHPT 729
H D + C A HPT
Sbjct: 98 HADYIRCVAVHPT 110
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/82 (24%), Positives = 40/82 (48%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
K+W +T+ GH +S V++ + +I++ S+D T+++W ++ + TL
Sbjct: 212 KVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGL 271
Query: 183 NYVFCCNFNPQSNLIVSGSFDE 248
V+ S +V G +DE
Sbjct: 272 ERVWAIGHIKGSRRVVIG-YDE 292
Score = 36.3 bits (80), Expect = 0.021
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+++ T +K AH+D + V + ++SSS D L ++WD G + + +
Sbjct: 83 VYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCTQIFEGHS 142
Query: 437 PPVSFVKFSPNGKYILA-ATLDNTL 508
V V F+P A A+LD T+
Sbjct: 143 HYVMQVTFNPKDTNTFASASLDRTI 167
Score = 35.5 bits (78), Expect = 0.036
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Frame = +3
Query: 3 KIWGAYDGKF-EKTISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKG 176
K+W G + GH + V ++ D+ SAS D+T+K+W L S TL
Sbjct: 124 KLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDA 183
Query: 177 HSNYVFCCNF--NPQSNLIVSGSFDES 251
H V C ++ +++GS D +
Sbjct: 184 HLKGVNCVDYFTGGDKPYLITGSDDHT 210
Score = 34.3 bits (75), Expect = 0.084
Identities = 15/80 (18%), Positives = 38/80 (47%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSN 185
IW K+ ++ + + + + +V+ +DD ++V+ ++ +K + H++
Sbjct: 41 IWNYQTQTMVKSFDVTELPVRSAKFIARKQWVVAGADDMFIRVYNYNTMDKIKVFEAHAD 100
Query: 186 YVFCCNFNPQSNLIVSGSFD 245
Y+ C +P ++S S D
Sbjct: 101 YIRCVAVHPTLPYVLSSSDD 120
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 502 HT-QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQ 678
HT ++WDY C++T GH + + + + I++GSED V IW+ + +
Sbjct: 209 HTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPEL---PIIITGSEDGTVRIWHATTYRLEN 265
Query: 679 RLS 687
L+
Sbjct: 266 TLN 268
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 60.5 bits (140), Expect = 1e-09
Identities = 31/88 (35%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 KIW--GAYDGKFEKTISGHKMGISDVAW--SSDSRLIVSASDDKTLKVWELSSGKCLKTL 170
KIW G+ D F T+ H+ G++ V + D +++ SDD T KVW+ + C++TL
Sbjct: 168 KIWNLGSPDPNF--TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL 225
Query: 171 KGHSNYVFCCNFNPQSNLIVSGSFDESV 254
+GH++ V F+P+ +I++GS D +V
Sbjct: 226 EGHTHNVSAVCFHPELPIIITGSEDGTV 253
Score = 47.6 bits (108), Expect = 8e-06
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = +3
Query: 36 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG-KCLKTLKGHSNYVFCCNFNP 212
K H I VA ++S+SDD +K+W+ G C + +GHS+YV FNP
Sbjct: 93 KVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQVTFNP 152
Query: 213 Q-SNLIVSGSFDESV 254
+ +N S S D ++
Sbjct: 153 KDTNTFASASLDRTI 167
Score = 45.2 bits (102), Expect = 4e-05
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 421
+WD +T C++ L H+ VSAV F+ + +I++ S DG RIW + + TL
Sbjct: 213 VWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTL 267
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGK-WIVSGSEDNLVYIWNLQSKEIVQRL 684
++W+ T H+ C+ ++ G K ++++GS+D+ +W+ Q+K VQ L
Sbjct: 168 KIWNLGSPDPNFTLDAHQKGVNCV--DYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL 225
Query: 685 SGHTDTVLCTACHP 726
GHT V HP
Sbjct: 226 EGHTHNVSAVCFHP 239
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/73 (27%), Positives = 37/73 (50%)
Frame = +1
Query: 511 LWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSG 690
+W+Y K++ E A F V +W+V+G++D + ++N + + V+
Sbjct: 41 IWNYQTQVMAKSF--EVTELPVRSAKF-VARKQWVVAGADDMYIRVYNYNTMDKVKVFEA 97
Query: 691 HTDTVLCTACHPT 729
H+D + C A HPT
Sbjct: 98 HSDYIRCVAVHPT 110
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/82 (24%), Positives = 40/82 (48%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
K+W +T+ GH +S V + + +I++ S+D T+++W ++ + TL
Sbjct: 212 KVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGL 271
Query: 183 NYVFCCNFNPQSNLIVSGSFDE 248
V+ + S +V G +DE
Sbjct: 272 ERVWAIGYIKSSRRVVIG-YDE 292
Score = 37.5 bits (83), Expect = 0.009
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+++ T +K AHSD + V + ++SSS D L ++WD G + + +
Sbjct: 83 VYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHS 142
Query: 437 PPVSFVKFSPNGKYILA-ATLDNTL 508
V V F+P A A+LD T+
Sbjct: 143 HYVMQVTFNPKDTNTFASASLDRTI 167
Score = 36.3 bits (80), Expect = 0.021
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Frame = +3
Query: 3 KIWGAYDG-KFEKTISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKG 176
K+W G + GH + V ++ D+ SAS D+T+K+W L S TL
Sbjct: 124 KLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDA 183
Query: 177 HSNYVFCCNF--NPQSNLIVSGSFDES 251
H V C ++ +++GS D +
Sbjct: 184 HQKGVNCVDYFTGGDKPYLITGSDDHT 210
Score = 35.1 bits (77), Expect = 0.048
Identities = 16/80 (20%), Positives = 38/80 (47%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSN 185
IW K+ ++ + + + + +V+ +DD ++V+ ++ +K + HS+
Sbjct: 41 IWNYQTQVMAKSFEVTELPVRSAKFVARKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSD 100
Query: 186 YVFCCNFNPQSNLIVSGSFD 245
Y+ C +P ++S S D
Sbjct: 101 YIRCVAVHPTLPYVLSSSDD 120
Score = 34.3 bits (75), Expect = 0.084
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +1
Query: 502 HT-QLWDYSRGKCLKTYTGHKN--EKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEI 672
HT ++WDY C++T GH + C + I++GSED V IW+ + +
Sbjct: 209 HTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI-----IITGSEDGTVRIWHATTYRL 263
Query: 673 VQRLS 687
L+
Sbjct: 264 ENTLN 268
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/66 (36%), Positives = 37/66 (56%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
KIW K EK ++GH+ + D +S D +V+AS D T ++W + +GK +K +GH
Sbjct: 236 KIWNVDGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGHH 295
Query: 183 NYVFCC 200
CC
Sbjct: 296 KATVCC 301
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +3
Query: 42 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 221
+ H I S ++ + +AS DKT+K+W + K K L GH +V+ C F+
Sbjct: 207 LQAHNGHILKCLLSPANKYLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDGE 266
Query: 222 LIVSGSFD 245
+V+ S D
Sbjct: 267 FLVTASSD 274
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYTGHKNEKY-CIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRL 684
++W+ K K TGH+ + C+F+ G+++V+ S D +W++ + + V+
Sbjct: 236 KIWNVDGFKLEKVLTGHQRWVWDCVFS----VDGEFLVTASSDMTARLWSMPAGKEVKVY 291
Query: 685 SGHTDTVLCTACH 723
GH +C A H
Sbjct: 292 QGHHKATVCCALH 304
Score = 36.3 bits (80), Expect = 0.021
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +1
Query: 460 LTEWKIYIGGDVRQHTQLWDYSRG--KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 633
+T K Y+ H +L+D + + + TY H N + F KW+ SGSED
Sbjct: 43 ITPDKHYLAAACNPHIRLFDVNSNSPQPVMTYDSHTNNVMAV--GFQCDA-KWMYSGSED 99
Query: 634 NLVYIWNLQS 663
V IW+L++
Sbjct: 100 GTVKIWDLRA 109
Score = 35.9 bits (79), Expect = 0.028
Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Frame = +2
Query: 257 IWDVRTGKCLKPL-PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT----- 418
+WD+R C L P V ++ DG+++V+++ G C +W G+ T
Sbjct: 145 VWDLRANSCSCELVPEVDTAVRSLTVMWDGTMVVAANNRGTCYVWRLLRGKQTMTEFEPL 204
Query: 419 -LIDDDNPPVSFVKFSPNGKYILAATLDNTL 508
+ N + SP KY+ A+ D T+
Sbjct: 205 HKLQAHNGHILKCLLSPANKYLATASSDKTV 235
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = +3
Query: 81 SSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 233
S S ++ +AS D T++ WE +G+C +T++ ++V P + + +
Sbjct: 2 SQPSVILATASYDHTIRFWEAETGRCYRTIQYPDSHVNRLEITPDKHYLAA 52
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/48 (29%), Positives = 30/48 (62%)
Frame = +2
Query: 347 LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAA 490
++ ++SYD R W+ +G+C +T+ D+ V+ ++ +P+ Y+ AA
Sbjct: 7 ILATASYDHTIRFWEAETGRCYRTIQYPDS-HVNRLEITPDKHYLAAA 53
Score = 33.5 bits (73), Expect = 0.15
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 39 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLK 164
T H + V + D++ + S S+D T+K+W+L + C K
Sbjct: 73 TYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQK 114
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 299 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 415
+H++ V AV F D + S S DG +IWD + C K
Sbjct: 76 SHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQK 114
Score = 32.7 bits (71), Expect = 0.26
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 415
IW+V K K L H V F+ DG +V++S D R+W +G+ +K
Sbjct: 237 IWNVDGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVK 289
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 607 KWIVSGSEDNLVYIWNLQSKEIVQRLSGH 693
K++ + S D V IWN+ ++ + L+GH
Sbjct: 224 KYLATASSDKTVKIWNVDGFKLEKVLTGH 252
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 59.7 bits (138), Expect = 2e-09
Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 KIW--GAYDGKFEKTISGHKMGISDVAW--SSDSRLIVSASDDKTLKVWELSSGKCLKTL 170
KIW G+ D F T+ H+ G++ V + D +++ SDD T KVW+ + C++TL
Sbjct: 168 KIWNLGSPDPNF--TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL 225
Query: 171 KGHSNYVFCCNFNPQSNLIVSGSFDESV 254
GH++ V F+P+ +I++GS D +V
Sbjct: 226 DGHTHNVSAVCFHPELPIIITGSEDGTV 253
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +3
Query: 36 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG-KCLKTLKGHSNYVFCCNFNP 212
K H I VA ++S+SDD +K+W+ +G C + +GHS+YV FNP
Sbjct: 93 KVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNP 152
Query: 213 Q-SNLIVSGSFDESV 254
+ +N S S D ++
Sbjct: 153 KDTNTFASASLDRTI 167
Score = 45.2 bits (102), Expect = 4e-05
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 421
+WD +T C++ L H+ VSAV F+ + +I++ S DG RIW + + TL
Sbjct: 213 VWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTL 267
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGK-WIVSGSEDNLVYIWNLQSKEIVQRL 684
++W+ T H+ C+ ++ G K ++++GS+D+ +W+ Q+K VQ L
Sbjct: 168 KIWNLGSPDPNFTLDAHQKGVNCV--DYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL 225
Query: 685 SGHTDTVLCTACHP 726
GHT V HP
Sbjct: 226 DGHTHNVSAVCFHP 239
Score = 40.3 bits (90), Expect = 0.001
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +1
Query: 607 KWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTACHPT 729
+W+V+G++D + ++N + + V+ H+D + C A HPT
Sbjct: 70 QWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPT 110
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/82 (24%), Positives = 40/82 (48%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
K+W +T+ GH +S V + + +I++ S+D T+++W ++ + TL
Sbjct: 212 KVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGL 271
Query: 183 NYVFCCNFNPQSNLIVSGSFDE 248
V+ + S +V G +DE
Sbjct: 272 ERVWAIGYIKSSRRVVIG-YDE 292
Score = 37.5 bits (83), Expect = 0.009
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+++ T +K AHSD + V + ++SSS D L ++WD +G + + +
Sbjct: 83 VYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHS 142
Query: 437 PPVSFVKFSPNGKYILA-ATLDNTL 508
V V F+P A A+LD T+
Sbjct: 143 HYVMQVVFNPKDTNTFASASLDRTI 167
Score = 37.1 bits (82), Expect = 0.012
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Frame = +3
Query: 3 KIWGAYDG-KFEKTISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKG 176
K+W +G + GH + V ++ D+ SAS D+T+K+W L S TL
Sbjct: 124 KLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDA 183
Query: 177 HSNYVFCCNF--NPQSNLIVSGSFDES 251
H V C ++ +++GS D +
Sbjct: 184 HQKGVNCVDYFTGGDKPYLITGSDDHT 210
Score = 34.7 bits (76), Expect = 0.064
Identities = 16/80 (20%), Positives = 37/80 (46%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSN 185
IW K+ ++ + + + +V+ +DD ++V+ ++ +K + HS+
Sbjct: 41 IWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSD 100
Query: 186 YVFCCNFNPQSNLIVSGSFD 245
Y+ C +P ++S S D
Sbjct: 101 YIRCVAVHPTLPYVLSSSDD 120
Score = 34.3 bits (75), Expect = 0.084
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +1
Query: 502 HT-QLWDYSRGKCLKTYTGHKN--EKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEI 672
HT ++WDY C++T GH + C + I++GSED V IW+ + +
Sbjct: 209 HTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPI-----IITGSEDGTVRIWHATTYRL 263
Query: 673 VQRLS 687
L+
Sbjct: 264 ENTLN 268
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 59.7 bits (138), Expect = 2e-09
Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 KIW--GAYDGKFEKTISGHKMGISDVAW--SSDSRLIVSASDDKTLKVWELSSGKCLKTL 170
KIW G+ D F T+ H+ G++ V + D +++ SDD T KVW+ + C++TL
Sbjct: 168 KIWNLGSPDPNF--TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL 225
Query: 171 KGHSNYVFCCNFNPQSNLIVSGSFDESV 254
GH++ V F+P+ +I++GS D +V
Sbjct: 226 DGHTHNVSAVCFHPELPIIITGSEDGTV 253
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +3
Query: 36 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG-KCLKTLKGHSNYVFCCNFNP 212
K H I VA ++S+SDD +K+W+ +G C + +GHS+YV FNP
Sbjct: 93 KVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNP 152
Query: 213 Q-SNLIVSGSFDESV 254
+ +N S S D ++
Sbjct: 153 KDTNTFASASLDRTI 167
Score = 45.2 bits (102), Expect = 4e-05
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 421
+WD +T C++ L H+ VSAV F+ + +I++ S DG RIW + + TL
Sbjct: 213 VWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTL 267
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGK-WIVSGSEDNLVYIWNLQSKEIVQRL 684
++W+ T H+ C+ ++ G K ++++GS+D+ +W+ Q+K VQ L
Sbjct: 168 KIWNLGSPDPNFTLDAHQKGVNCV--DYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL 225
Query: 685 SGHTDTVLCTACHP 726
GHT V HP
Sbjct: 226 DGHTHNVSAVCFHP 239
Score = 40.3 bits (90), Expect = 0.001
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +1
Query: 607 KWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTACHPT 729
+W+V+G++D + ++N + + V+ H+D + C A HPT
Sbjct: 70 QWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPT 110
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/82 (24%), Positives = 40/82 (48%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
K+W +T+ GH +S V + + +I++ S+D T+++W ++ + TL
Sbjct: 212 KVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGL 271
Query: 183 NYVFCCNFNPQSNLIVSGSFDE 248
V+ + S +V G +DE
Sbjct: 272 ERVWAIGYIKSSRRVVIG-YDE 292
Score = 37.5 bits (83), Expect = 0.009
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+++ T +K AHSD + V + ++SSS D L ++WD +G + + +
Sbjct: 83 VYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHS 142
Query: 437 PPVSFVKFSPNGKYILA-ATLDNTL 508
V V F+P A A+LD T+
Sbjct: 143 HYVMQVVFNPKDTNTFASASLDRTI 167
Score = 37.1 bits (82), Expect = 0.012
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Frame = +3
Query: 3 KIWGAYDG-KFEKTISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKG 176
K+W +G + GH + V ++ D+ SAS D+T+K+W L S TL
Sbjct: 124 KLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDA 183
Query: 177 HSNYVFCCNF--NPQSNLIVSGSFDES 251
H V C ++ +++GS D +
Sbjct: 184 HQKGVNCVDYFTGGDKPYLITGSDDHT 210
Score = 34.7 bits (76), Expect = 0.064
Identities = 16/80 (20%), Positives = 37/80 (46%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSN 185
IW K+ ++ + + + +V+ +DD ++V+ ++ +K + HS+
Sbjct: 41 IWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSD 100
Query: 186 YVFCCNFNPQSNLIVSGSFD 245
Y+ C +P ++S S D
Sbjct: 101 YIRCVAVHPTLPYVLSSSDD 120
Score = 34.3 bits (75), Expect = 0.084
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +1
Query: 502 HT-QLWDYSRGKCLKTYTGHKN--EKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEI 672
HT ++WDY C++T GH + C + I++GSED V IW+ + +
Sbjct: 209 HTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPI-----IITGSEDGTVRIWHATTYRL 263
Query: 673 VQRLS 687
L+
Sbjct: 264 ENTLN 268
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 59.7 bits (138), Expect = 2e-09
Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 KIW--GAYDGKFEKTISGHKMGISDVAW--SSDSRLIVSASDDKTLKVWELSSGKCLKTL 170
KIW G+ D F T+ H+ G++ V + D +++ SDD T KVW+ + C++TL
Sbjct: 168 KIWNLGSPDPNF--TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL 225
Query: 171 KGHSNYVFCCNFNPQSNLIVSGSFDESV 254
GH++ V F+P+ +I++GS D +V
Sbjct: 226 DGHTHNVSAVCFHPELPIIITGSEDGTV 253
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +3
Query: 36 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG-KCLKTLKGHSNYVFCCNFNP 212
K H I VA ++S+SDD +K+W+ +G C + +GHS+YV FNP
Sbjct: 93 KVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNP 152
Query: 213 Q-SNLIVSGSFDESV 254
+ +N S S D ++
Sbjct: 153 KDTNTFASASLDRTI 167
Score = 45.2 bits (102), Expect = 4e-05
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 421
+WD +T C++ L H+ VSAV F+ + +I++ S DG RIW + + TL
Sbjct: 213 VWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTL 267
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGK-WIVSGSEDNLVYIWNLQSKEIVQRL 684
++W+ T H+ C+ ++ G K ++++GS+D+ +W+ Q+K VQ L
Sbjct: 168 KIWNLGSPDPNFTLDAHQKGVNCV--DYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL 225
Query: 685 SGHTDTVLCTACHP 726
GHT V HP
Sbjct: 226 DGHTHNVSAVCFHP 239
Score = 40.3 bits (90), Expect = 0.001
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +1
Query: 607 KWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTACHPT 729
+W+V+G++D + ++N + + V+ H+D + C A HPT
Sbjct: 70 QWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPT 110
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/82 (24%), Positives = 40/82 (48%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
K+W +T+ GH +S V + + +I++ S+D T+++W ++ + TL
Sbjct: 212 KVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGL 271
Query: 183 NYVFCCNFNPQSNLIVSGSFDE 248
V+ + S +V G +DE
Sbjct: 272 ERVWAIGYIKSSRRVVIG-YDE 292
Score = 37.5 bits (83), Expect = 0.009
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+++ T +K AHSD + V + ++SSS D L ++WD +G + + +
Sbjct: 83 VYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHS 142
Query: 437 PPVSFVKFSPNGKYILA-ATLDNTL 508
V V F+P A A+LD T+
Sbjct: 143 HYVMQVVFNPKDTNTFASASLDRTI 167
Score = 37.1 bits (82), Expect = 0.012
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Frame = +3
Query: 3 KIWGAYDG-KFEKTISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKG 176
K+W +G + GH + V ++ D+ SAS D+T+K+W L S TL
Sbjct: 124 KLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDA 183
Query: 177 HSNYVFCCNF--NPQSNLIVSGSFDES 251
H V C ++ +++GS D +
Sbjct: 184 HQKGVNCVDYFTGGDKPYLITGSDDHT 210
Score = 34.7 bits (76), Expect = 0.064
Identities = 16/80 (20%), Positives = 37/80 (46%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSN 185
IW K+ ++ + + + +V+ +DD ++V+ ++ +K + HS+
Sbjct: 41 IWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSD 100
Query: 186 YVFCCNFNPQSNLIVSGSFD 245
Y+ C +P ++S S D
Sbjct: 101 YIRCVAVHPTLPYVLSSSDD 120
Score = 34.3 bits (75), Expect = 0.084
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +1
Query: 502 HT-QLWDYSRGKCLKTYTGHKN--EKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEI 672
HT ++WDY C++T GH + C + I++GSED V IW+ + +
Sbjct: 209 HTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPI-----IITGSEDGTVRIWHATTYRL 263
Query: 673 VQRLS 687
L+
Sbjct: 264 ENTLN 268
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 59.3 bits (137), Expect = 3e-09
Identities = 25/84 (29%), Positives = 44/84 (52%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
++W + G KT H + DV +SD+ S D+ + W++S+G+ ++ +GH
Sbjct: 43 RLWNPHRGILIKTYKSHGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHD 102
Query: 183 NYVFCCNFNPQSNLIVSGSFDESV 254
V FN S+++VS FD S+
Sbjct: 103 GEVNAVKFNDSSSVVVSAGFDRSL 126
Score = 48.8 bits (111), Expect = 4e-06
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +2
Query: 248 ECWIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 400
+ + WDV TG+ ++ H V+AV FN S++VS+ +D R+WD S
Sbjct: 83 QVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRS 133
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Frame = +1
Query: 481 IGGDVRQHTQLWDYSRGKCLKTYTGHKNEKY---CIFANFSVTGGKWIVSGSEDNLVYIW 651
+ G + +L D + G+ L+ Y GH ++ + C N ++ GSED LV+ W
Sbjct: 200 LAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAH----VIGGSEDGLVFFW 255
Query: 652 NLQSKEIVQRLSGHTDTVLCTACHP 726
+L +++ + H V + HP
Sbjct: 256 DLVDAKVLSKFRAHDLVVTSVSYHP 280
Score = 34.7 bits (76), Expect = 0.064
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLS 687
+LW+ RG +KTY H E + + + K+ G D VY W++ + ++++
Sbjct: 43 RLWNPHRGILIKTYKSHGREVRDV--HVTSDNAKFCSCGG-DRQVYYWDVSTGRVIRKFR 99
Query: 688 GHTDTV 705
GH V
Sbjct: 100 GHDGEV 105
Score = 34.7 bits (76), Expect = 0.064
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +1
Query: 484 GGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQS 663
GGD + WD S G+ ++ + GH E + N S +VS D + +W+ +S
Sbjct: 79 GGD--RQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDS---SSVVVSAGFDRSLRVWDCRS 133
Query: 664 KEI--VQRLSGHTDTVL 708
+ VQ + DTV+
Sbjct: 134 HSVEPVQIIDTFLDTVM 150
Score = 34.7 bits (76), Expect = 0.064
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +3
Query: 9 WGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSS 149
W G+ + GH ++ V ++ S ++VSA D++L+VW+ S
Sbjct: 87 WDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRS 133
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/86 (22%), Positives = 34/86 (39%)
Frame = +3
Query: 42 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 221
+ GH+ + ++ D ++ D+T+++W G +KT K H V + +
Sbjct: 14 LKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNA 73
Query: 222 LIVSGSFDESVGYGM*EQGNV*NHYR 299
S D V Y G V +R
Sbjct: 74 KFCSCGGDRQVYYWDVSTGRVIRKFR 99
Score = 33.9 bits (74), Expect = 0.11
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +2
Query: 257 IWDVRTGKC--LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 430
+WD R+ ++ + D V +V + + I+ S DG R +D G + + D+
Sbjct: 128 VWDCRSHSVEPVQIIDTFLDTVMSVVLTK--TEIIGGSVDGTVRTFDMRIG---REMSDN 182
Query: 431 DNPPVSFVKFSPNGKYILAATLDNTL 508
PV+ + S +G +LA LD+TL
Sbjct: 183 LGQPVNCISISNDGNCVLAGCLDSTL 208
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/79 (20%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +3
Query: 24 GKFEKTISGH--KMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFC 197
G+ + GH K +D ++ ++ S+D + W+L K L + H V
Sbjct: 216 GELLQVYKGHISKSFKTDCCLTNSDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTS 275
Query: 198 CNFNPQSNLIVSGSFDESV 254
+++P+ + +++ S D ++
Sbjct: 276 VSYHPKEDCMLTSSVDGTI 294
Score = 33.1 bits (72), Expect = 0.19
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 254 WIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 388
+ WD+ K L AH V++V ++ +++SS DG R+W
Sbjct: 253 FFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDGTIRVW 297
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 293 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 418
L H V A FN DG+ ++ D R+W+ G +KT
Sbjct: 14 LKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKT 55
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 59.3 bits (137), Expect = 3e-09
Identities = 31/84 (36%), Positives = 49/84 (58%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
IW +RTG C++ AHS V+++ F+RDGS ++S+S+D RI SG+ LK
Sbjct: 289 IWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKE-FRGHT 347
Query: 437 PPVSFVKFSPNGKYILAATLDNTL 508
V+ F+ +G I+ A+ D T+
Sbjct: 348 SYVNHAIFTSDGSRIITASSDCTV 371
Score = 55.6 bits (128), Expect = 3e-08
Identities = 27/84 (32%), Positives = 45/84 (53%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
KIW G + H G++ +++S D ++S S D+T ++ L SGK LK +GH+
Sbjct: 288 KIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKEFRGHT 347
Query: 183 NYVFCCNFNPQSNLIVSGSFDESV 254
+YV F + I++ S D +V
Sbjct: 348 SYVNHAIFTSDGSRIITASSDCTV 371
Score = 54.8 bits (126), Expect = 6e-08
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Frame = +2
Query: 257 IWDVRTGKCLKPLP--------AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 412
+WD +GK K L H DPV + F+RD ++ S S DG +IW +G C+
Sbjct: 239 VWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCI 298
Query: 413 KTLIDDDNPPVSFVKFSPNGKYILAATLDNT 505
+ D + V+ + FS +G +L+ + D T
Sbjct: 299 RR-FDAHSQGVTSLSFSRDGSQLLSTSFDQT 328
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISG--------HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKC 158
++W GK +K + H + + +S DS ++ S S D +K+W + +G C
Sbjct: 238 EVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVC 297
Query: 159 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 251
++ HS V +F+ + ++S SFD++
Sbjct: 298 IRRFDAHSQGVTSLSFSRDGSQLLSTSFDQT 328
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/57 (36%), Positives = 32/57 (56%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK 173
+I G GK K GH ++ ++SD I++AS D T+KVW+ + CL+T K
Sbjct: 330 RIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKTTDCLQTFK 386
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/54 (35%), Positives = 32/54 (59%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 418
I +++GK LK H+ V+ F DGS I+++S D ++WD+ + CL+T
Sbjct: 331 IHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKTTDCLQT 384
Score = 37.5 bits (83), Expect = 0.009
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Frame = +3
Query: 48 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK--------GHSNYVFCCN 203
G K +S D + + S+S D ++VW+ SGK K L+ H + V C +
Sbjct: 211 GKKSHAECARFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCID 270
Query: 204 FNPQSNLIVSGSFDESV 254
F+ S ++ SGS D +
Sbjct: 271 FSRDSEMLASGSQDGKI 287
Score = 34.7 bits (76), Expect = 0.064
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Frame = +2
Query: 329 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTL---IDDD----NPPVSFVKFSPNGKYILA 487
F+ DG + SSS DG +WD SG+ K L D+ + PV + FS + + + +
Sbjct: 221 FSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLAS 280
Query: 488 ATLDNTLNYGTIAEENV*RHIRDTRTKNIVSL 583
+ D + I R D ++ + SL
Sbjct: 281 GSQDGKIKIWRIRTGVCIRRF-DAHSQGVTSL 311
Score = 32.7 bits (71), Expect = 0.26
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYTGHKNEKYCIF------ANFSVTGGKWIVSGSEDNLVYIWNLQSKE 669
++WDY GK K +E + + +FS + + SGS+D + IW +++
Sbjct: 238 EVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFS-RDSEMLASGSQDGKIKIWRIRTGV 296
Query: 670 IVQRLSGHTDTV 705
++R H+ V
Sbjct: 297 CIRRFDAHSQGV 308
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/67 (26%), Positives = 29/67 (43%)
Frame = +1
Query: 526 RGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 705
+G+ +K+++ E A T G WI ED +Y +N QS + + H V
Sbjct: 426 QGQVVKSFSSGNREGGDFVAACVSTKGDWIYCIGEDKKLYCFNYQSGGLEHFMMVHEKDV 485
Query: 706 LCTACHP 726
+ HP
Sbjct: 486 IGITHHP 492
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 59.3 bits (137), Expect = 3e-09
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL---- 170
++W G + GH + VA+S D+R IVSAS D+T+K+W + G+C T+
Sbjct: 88 RLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWN-TLGECKYTISEGG 146
Query: 171 KGHSNYVFCCNFNPQS--NLIVSGSFDESV 254
+GH ++V C F+P + IVS S+D++V
Sbjct: 147 EGHRDWVSCVRFSPNTLQPTIVSASWDKTV 176
Score = 55.2 bits (127), Expect = 4e-08
Identities = 36/87 (41%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Frame = +3
Query: 3 KIWGAYDGKFEKTIS----GHKMGISDVAWSSDSR--LIVSASDDKTLKVWELSSGKCLK 164
K+W G+ + TIS GH+ +S V +S ++ IVSAS DKT+KVW LS+ K
Sbjct: 130 KLWNTL-GECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRS 188
Query: 165 TLKGHSNYVFCCNFNPQSNLIVSGSFD 245
TL GH+ YV +P +L SG D
Sbjct: 189 TLAGHTGYVSTVAVSPDGSLCASGGKD 215
Score = 50.8 bits (116), Expect = 9e-07
Identities = 28/79 (35%), Positives = 42/79 (53%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+W++ K L H+ VS V + DGSL S DG+ +WD A G+ L +L + N
Sbjct: 178 VWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSL--EAN 235
Query: 437 PPVSFVKFSPNGKYILAAT 493
+ + FSPN ++ AAT
Sbjct: 236 SVIHALCFSPNRYWLCAAT 254
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/77 (31%), Positives = 42/77 (54%)
Frame = +3
Query: 24 GKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCN 203
G ++ ++GH + DV SSD + +S S D L++W+L++G + GH+ V
Sbjct: 53 GVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVA 112
Query: 204 FNPQSNLIVSGSFDESV 254
F+ + IVS S D ++
Sbjct: 113 FSLDNRQIVSASRDRTI 129
Score = 46.4 bits (105), Expect = 2e-05
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = +2
Query: 263 DVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 442
D G + L HS V V + DG +S S+DG R+WD A+G + +
Sbjct: 49 DKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDV 108
Query: 443 VSFVKFSPNGKYILAATLDNTLN-YGTIAE 529
+S V FS + + I++A+ D T+ + T+ E
Sbjct: 109 LS-VAFSLDNRQIVSASRDRTIKLWNTLGE 137
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/70 (34%), Positives = 37/70 (52%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
K+W + K T++GH +S VA S D L S D + +W+L+ GK L +L+ +S
Sbjct: 177 KVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANS 236
Query: 183 NYVFCCNFNP 212
C F+P
Sbjct: 237 VIHALC-FSP 245
Score = 45.6 bits (103), Expect = 3e-05
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Frame = +2
Query: 248 ECWIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 427
E +WD+ G + H+ V +V F+ D IVS+S D ++W+T G+C T+ +
Sbjct: 86 ELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTL-GECKYTISE 144
Query: 428 DDNPP---VSFVKFSPN--GKYILAATLDNTL 508
VS V+FSPN I++A+ D T+
Sbjct: 145 GGEGHRDWVSCVRFSPNTLQPTIVSASWDKTV 176
Score = 35.9 bits (79), Expect = 0.028
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYT----GHKNEKYCIFANFSV-TGGKWIVSGSEDNLVYIWNLQSKEI 672
+LW+ + G+C T + GH++ C+ FS T IVS S D V +WNL + ++
Sbjct: 130 KLWN-TLGECKYTISEGGEGHRDWVSCV--RFSPNTLQPTIVSASWDKTVKVWNLSNCKL 186
Query: 673 VQRLSGHTDTVLCTACHP 726
L+GHT V A P
Sbjct: 187 RSTLAGHTGYVSTVAVSP 204
Score = 35.5 bits (78), Expect = 0.036
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Frame = +3
Query: 39 TISGHKMGISDVAWSSDSR-LIVSASDDKTLKVWELSS-----GKCLKTLKGHSNYVFCC 200
T+ H ++ +A D+ +IVSAS DK++ +W+L+ G + L GHS++V
Sbjct: 10 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDV 69
Query: 201 NFNPQSNLIVSGSFD 245
+ +SGS+D
Sbjct: 70 VLSSDGQFALSGSWD 84
Score = 35.1 bits (77), Expect = 0.048
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSK---EIVQ 678
+LWD + G + + GH K + FS+ + IVS S D + +WN + I +
Sbjct: 88 RLWDLAAGVSTRRFVGH--TKDVLSVAFSL-DNRQIVSASRDRTIKLWNTLGECKYTISE 144
Query: 679 RLSGHTDTVLCTACHP 726
GH D V C P
Sbjct: 145 GGEGHRDWVSCVRFSP 160
Score = 31.1 bits (67), Expect = 0.78
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +1
Query: 517 DYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHT 696
D + G + TGH + + + + G++ +SGS D + +W+L + +R GHT
Sbjct: 49 DKAYGVAQRRLTGHSHFVEDVVLS---SDGQFALSGSWDGELRLWDLAAGVSTRRFVGHT 105
Query: 697 DTVLCTA 717
VL A
Sbjct: 106 KDVLSVA 112
Score = 31.1 bits (67), Expect = 0.78
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +2
Query: 302 HSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 475
H D VS V F N IVS+S+D ++W+ ++ + L++ + VS V SP+G
Sbjct: 149 HRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK-LRSTLAGHTGYVSTVAVSPDGS 207
Query: 476 YILAATLDNTLNYGTIAE 529
+ D + +AE
Sbjct: 208 LCASGGKDGVVLLWDLAE 225
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 58.4 bits (135), Expect = 5e-09
Identities = 29/82 (35%), Positives = 42/82 (51%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+WD+ TG L HS V + F +DG+L S D L R+WD +G+ + +
Sbjct: 365 LWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSI-LVFQGHI 423
Query: 437 PPVSFVKFSPNGKYILAATLDN 502
PV V FSPNG ++ + DN
Sbjct: 424 KPVFSVNFSPNGYHLASGGEDN 445
Score = 54.4 bits (125), Expect = 7e-08
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+WD+RTG+ + H PV +V+F+ +G + S D CRIWD + L + N
Sbjct: 407 VWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHAN 466
Query: 437 PPVSFVKFSPNGKYILA-ATLDNTLN 511
VS VK+ P Y LA A+ D +N
Sbjct: 467 -LVSQVKYEPQEGYFLATASYDMKVN 491
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/81 (28%), Positives = 36/81 (44%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
++W G GH + +A+ D L S D +VW+L +G+ + +GH
Sbjct: 364 RLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHI 423
Query: 183 NYVFCCNFNPQSNLIVSGSFD 245
VF NF+P + SG D
Sbjct: 424 KPVFSVNFSPNGYHLASGGED 444
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Frame = +2
Query: 248 ECWIWDVRTGKCLKPLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLI 424
+C IWD+R K L +PAH++ VS V + ++G + ++SYD IW +K+L
Sbjct: 446 QCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLA 505
Query: 425 DDDNPPVSFVKFSPNGKYILAATLDNTLNYGT 520
++ V+ + + + I + D T+ T
Sbjct: 506 GHES-KVASLDITADSSCIATVSHDRTIKLWT 536
Score = 44.8 bits (101), Expect = 6e-05
Identities = 24/81 (29%), Positives = 40/81 (49%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
K+W DG +T GH ++ VA+ + + + S DKT ++W++++G L +GHS
Sbjct: 323 KLWKT-DGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHS 381
Query: 183 NYVFCCNFNPQSNLIVSGSFD 245
V+ F L S D
Sbjct: 382 RSVYGIAFQQDGALAASCGLD 402
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
++W G+ GH + V +S + + S +D ++W+L K L + H+
Sbjct: 406 RVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHA 465
Query: 183 NYVFCCNFNPQSN-LIVSGSFDESV 254
N V + PQ + + S+D V
Sbjct: 466 NLVSQVKYEPQEGYFLATASYDMKV 490
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/70 (28%), Positives = 39/70 (55%)
Frame = +3
Query: 42 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 221
+ HK +DV +S + +AS D+T K+W+ + G L+T +GH + + F+P
Sbjct: 294 LKDHKERATDVVFSPVDDCLATASADRTAKLWK-TDGTLLQTFEGHLDRLARVAFHPSGK 352
Query: 222 LIVSGSFDES 251
+ + S+D++
Sbjct: 353 YLGTTSYDKT 362
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG 152
IW D K+++GH+ ++ + ++DS I + S D+T+K+W SSG
Sbjct: 492 IWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLW-TSSG 539
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLS 687
++WD G+ + + GH + + NFS G + SG EDN IW+L+ ++ + +
Sbjct: 406 RVWDLRTGRSILVFQGHIKPVFSV--NFS-PNGYHLASGGEDNQCRIWDLRMRKSLYIIP 462
Query: 688 GHTDTV 705
H + V
Sbjct: 463 AHANLV 468
Score = 35.5 bits (78), Expect = 0.036
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = +2
Query: 311 PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAA 490
P++ F+RDG ++ + S G+ ++W+ ++ D + V FSP + A
Sbjct: 257 PLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATA 316
Query: 491 TLDNT 505
+ D T
Sbjct: 317 SADRT 321
Score = 34.7 bits (76), Expect = 0.064
Identities = 21/76 (27%), Positives = 36/76 (47%)
Frame = +2
Query: 275 GKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 454
G L+ H D ++ V F+ G + ++SYD R+WD +G L L + + V +
Sbjct: 329 GTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAEL-LLQEGHSRSVYGI 387
Query: 455 KFSPNGKYILAATLDN 502
F +G + LD+
Sbjct: 388 AFQQDGALAASCGLDS 403
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 403
IW R +K L H V+++ D S I + S+D ++W T+SG
Sbjct: 492 IWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLW-TSSG 539
Score = 32.3 bits (70), Expect = 0.34
Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKGH 179
+IW K I H +S V + + + +AS D + +W +K+L GH
Sbjct: 448 RIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGH 507
Query: 180 SNYVFCCNFNPQSNLIVSGSFDESV 254
+ V + S+ I + S D ++
Sbjct: 508 ESKVASLDITADSSCIATVSHDRTI 532
Score = 31.1 bits (67), Expect = 0.78
Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +2
Query: 257 IWDV-RTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 433
+W++ + + L H + + V F+ + ++S D ++W T G L+T +
Sbjct: 281 LWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKT-DGTLLQTF-EGH 338
Query: 434 NPPVSFVKFSPNGKYILAATLDNT 505
++ V F P+GKY+ + D T
Sbjct: 339 LDRLARVAFHPSGKYLGTTSYDKT 362
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/74 (27%), Positives = 33/74 (44%)
Frame = +1
Query: 484 GGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQS 663
GG+ Q ++WD K L H N + + G ++ + S D V IW+ +
Sbjct: 441 GGEDNQ-CRIWDLRMRKSLYIIPAHANLVSQV--KYEPQEGYFLATASYDMKVNIWSGRD 497
Query: 664 KEIVQRLSGHTDTV 705
+V+ L+GH V
Sbjct: 498 FSLVKSLAGHESKV 511
Score = 28.7 bits (61), Expect = 4.2
Identities = 22/84 (26%), Positives = 31/84 (36%), Gaps = 1/84 (1%)
Frame = +1
Query: 478 YIGGDVRQHT-QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 654
Y+G T +LWD + G L GH Y I G S D+L +W+
Sbjct: 353 YLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQ---QDGALAASCGLDSLARVWD 409
Query: 655 LQSKEIVQRLSGHTDTVLCTACHP 726
L++ + GH V P
Sbjct: 410 LRTGRSILVFQGHIKPVFSVNFSP 433
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 58.4 bits (135), Expect = 5e-09
Identities = 26/66 (39%), Positives = 44/66 (66%)
Frame = +3
Query: 36 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 215
K ++GH ++D +SS+++ I S+S DKT++VWELS G C++ + G S +C F+P
Sbjct: 210 KQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIRVIYGISPQ-YCIRFHPV 268
Query: 216 SNLIVS 233
+N +S
Sbjct: 269 NNNFLS 274
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +2
Query: 284 LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 463
LK L HS V+ F+ + I SSS D R+W+ + G C++ + P ++F
Sbjct: 209 LKQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIRVIYGIS--PQYCIRFH 266
Query: 464 P-NGKYILAATLDNTL 508
P N ++ A + L
Sbjct: 267 PVNNNFLSAGNANKEL 282
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +3
Query: 99 IVSASDDKTLKVWELSSGK--CLKTLKGHSNYVFCCNFNPQSNLIVSGSF 242
IV+ S+D + ++L+ K C+ L+GH V C +N NL+ S F
Sbjct: 419 IVAGSEDSNVYFYDLTKPKHTCVNKLQGHRFPVMCVAWNHGENLLASSDF 468
Score = 31.5 bits (68), Expect = 0.59
Identities = 14/59 (23%), Positives = 33/59 (55%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRL 684
++W+ SRG C++ G + +YCI F ++ +G+ + + ++N + I+++L
Sbjct: 241 RVWELSRGVCIRVIYG-ISPQYCI--RFHPVNNNFLSAGNANKELTVFNFSTGRIIKKL 296
Score = 27.9 bits (59), Expect = 7.3
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = +3
Query: 84 SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 254
S L ASD L LK L GHS V +F+ + I S S D+++
Sbjct: 184 SSDILAYGASDGSLTVCSLLEEPSVLKQLTGHSKDVTDFDFSSNNQYIASSSLDKTI 240
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 57.6 bits (133), Expect = 8e-09
Identities = 25/81 (30%), Positives = 45/81 (55%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
KIW G + T++GH + +A S+ + SA DDK +K W+L K +++ GH
Sbjct: 201 KIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHL 260
Query: 183 NYVFCCNFNPQSNLIVSGSFD 245
+ V+C +P +++++G D
Sbjct: 261 SGVYCLALHPTLDVLLTGGRD 281
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/85 (27%), Positives = 48/85 (56%)
Frame = +1
Query: 475 IYIGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 654
++ GD +Q + WD + K +++Y GH + YC+ + ++ +++G D++ +W+
Sbjct: 233 MFSAGDDKQ-VKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDV---LLTGGRDSVCRVWD 288
Query: 655 LQSKEIVQRLSGHTDTVLCTACHPT 729
+++K + LSGH +TV PT
Sbjct: 289 IRTKMQIFALSGHDNTVCSVFTRPT 313
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/88 (27%), Positives = 41/88 (46%)
Frame = +1
Query: 466 EWKIYIGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 645
EW + G + ++WD + G T TGH + + + T ++ S +D V
Sbjct: 189 EW--FCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHT---YMFSAGDDKQVK 243
Query: 646 IWNLQSKEIVQRLSGHTDTVLCTACHPT 729
W+L+ ++++ GH V C A HPT
Sbjct: 244 CWDLEQNKVIRSYHGHLSGVYCLALHPT 271
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/75 (29%), Positives = 34/75 (45%)
Frame = +3
Query: 42 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 221
+SGH + V +V+ S D T+K W+L GK + TL H V +P+ N
Sbjct: 298 LSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKEN 357
Query: 222 LIVSGSFDESVGYGM 266
S S D + + +
Sbjct: 358 AFASASADNTKKFSL 372
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/88 (26%), Positives = 38/88 (43%)
Frame = +2
Query: 251 CWIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 430
C +WD+RT + L H + V +V +V+ S+D + WD G+ + TL
Sbjct: 284 CRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTL-TH 342
Query: 431 DNPPVSFVKFSPNGKYILAATLDNTLNY 514
V + P +A+ DNT +
Sbjct: 343 HKKSVRAMTLHPKENAFASASADNTKKF 370
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/86 (23%), Positives = 38/86 (44%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
K W K ++ GH G+ +A ++++ D +VW++ + + L GH
Sbjct: 243 KCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHD 302
Query: 183 NYVFCCNFNPQSNLIVSGSFDESVGY 260
N V P +V+GS D ++ +
Sbjct: 303 NTVCSVFTRPTDPQVVTGSHDTTIKF 328
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/87 (26%), Positives = 39/87 (44%)
Frame = +3
Query: 36 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 215
+ I GH + VA+ + + S D+T+K+W++++G TL GH V + +
Sbjct: 170 RVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNR 229
Query: 216 SNLIVSGSFDESVGYGM*EQGNV*NHY 296
+ S D+ V EQ V Y
Sbjct: 230 HTYMFSAGDDKQVKCWDLEQNKVIRSY 256
Score = 35.5 bits (78), Expect = 0.036
Identities = 18/85 (21%), Positives = 36/85 (42%)
Frame = +2
Query: 260 WDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 439
WD+ K ++ H V + + ++++ D +CR+WD + + L DN
Sbjct: 245 WDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDN- 303
Query: 440 PVSFVKFSPNGKYILAATLDNTLNY 514
V V P ++ + D T+ +
Sbjct: 304 TVCSVFTRPTDPQVVTGSHDTTIKF 328
Score = 32.7 bits (71), Expect = 0.26
Identities = 17/73 (23%), Positives = 32/73 (43%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLS 687
++WD + +GH N +F + +V+GS D + W+L+ + + L+
Sbjct: 285 RVWDIRTKMQIFALSGHDNTVCSVFTRPT---DPQVVTGSHDTTIKFWDLRYGKTMSTLT 341
Query: 688 GHTDTVLCTACHP 726
H +V HP
Sbjct: 342 HHKKSVRAMTLHP 354
Score = 27.5 bits (58), Expect = 9.6
Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK-CLKTLKGH 179
K W GK T++ HK + + SAS D T K + L G+ C L
Sbjct: 327 KFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASADNT-KKFSLPKGEFCHNMLSQQ 385
Query: 180 SNYVFCCNFNPQSNLIVSGSFDESVGY 260
+ N + ++V+G + S+ +
Sbjct: 386 KTIINAMAVN-EDGVMVTGGDNGSIWF 411
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 57.6 bits (133), Expect = 8e-09
Identities = 25/81 (30%), Positives = 45/81 (55%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
KIW G + T++GH + +A S+ + SA DDK +K W+L K +++ GH
Sbjct: 195 KIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHL 254
Query: 183 NYVFCCNFNPQSNLIVSGSFD 245
+ V+C +P +++++G D
Sbjct: 255 HGVYCLALHPTLDVVLTGGRD 275
Score = 45.2 bits (102), Expect = 4e-05
Identities = 24/88 (27%), Positives = 41/88 (46%)
Frame = +1
Query: 466 EWKIYIGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 645
EW + G + ++WD + G T TGH + + + T ++ S +D V
Sbjct: 183 EW--FCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHT---YMFSAGDDKQVK 237
Query: 646 IWNLQSKEIVQRLSGHTDTVLCTACHPT 729
W+L+ ++++ GH V C A HPT
Sbjct: 238 CWDLEQNKVIRSYHGHLHGVYCLALHPT 265
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/84 (27%), Positives = 39/84 (46%)
Frame = +2
Query: 251 CWIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 430
C +WD+RT + LP SD S + D +++ S+D + WD G+ + T I +
Sbjct: 278 CRVWDIRTKMQIFVLPHDSDVFSVLARPTDPQ-VITGSHDSTIKFWDLRYGKSMAT-ITN 335
Query: 431 DNPPVSFVKFSPNGKYILAATLDN 502
V + P ++A+ DN
Sbjct: 336 HKKTVRAMALHPKENDFVSASADN 359
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 99 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 245
+++ S D T+K W+L GK + T+ H V +P+ N VS S D
Sbjct: 310 VITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFVSASAD 358
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/87 (25%), Positives = 39/87 (44%)
Frame = +3
Query: 36 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 215
+ + GH + VA+ + + S D+T+K+W++++G TL GH V + +
Sbjct: 164 RVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNR 223
Query: 216 SNLIVSGSFDESVGYGM*EQGNV*NHY 296
+ S D+ V EQ V Y
Sbjct: 224 HTYMFSAGDDKQVKCWDLEQNKVIRSY 250
Score = 34.7 bits (76), Expect = 0.064
Identities = 18/86 (20%), Positives = 38/86 (44%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
K W K ++ GH G+ +A ++++ D +VW++ + + L H
Sbjct: 237 KCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQIFVLP-HD 295
Query: 183 NYVFCCNFNPQSNLIVSGSFDESVGY 260
+ VF P +++GS D ++ +
Sbjct: 296 SDVFSVLARPTDPQVITGSHDSTIKF 321
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/85 (20%), Positives = 37/85 (43%)
Frame = +2
Query: 260 WDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 439
WD+ K ++ H V + + ++++ D +CR+WD + + L D +
Sbjct: 239 WDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQIFVLPHDSD- 297
Query: 440 PVSFVKFSPNGKYILAATLDNTLNY 514
V V P ++ + D+T+ +
Sbjct: 298 -VFSVLARPTDPQVITGSHDSTIKF 321
Score = 31.5 bits (68), Expect = 0.59
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +1
Query: 613 IVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTACHP 726
+++GS D+ + W+L+ + + ++ H TV A HP
Sbjct: 310 VITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHP 347
Score = 27.5 bits (58), Expect = 9.6
Identities = 21/79 (26%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK-CLKTLKGH 179
K W GK TI+ HK + +A VSAS D +K + L G+ C L
Sbjct: 320 KFWDLRYGKSMATITNHKKTVRAMALHPKENDFVSASAD-NIKKFSLPKGEFCHNMLSLQ 378
Query: 180 SNYVFCCNFNPQSNLIVSG 236
+ + N ++ G
Sbjct: 379 RDIINAVAVNEDGVMVTGG 397
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Frame = +3
Query: 48 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNL 224
GH + D++WS D+ L+ SAS DKT+++W++ S CL H++YV FNP N
Sbjct: 326 GHTGEVLDISWSKDNYLL-SASMDKTVRLWKVGSNDCLGVF-AHNSYVTSVQFNPVNENY 383
Query: 225 IVSGSFDESV 254
+SGS D V
Sbjct: 384 FMSGSIDGKV 393
Score = 35.5 bits (78), Expect = 0.036
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +2
Query: 278 KCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 457
K L H+ V + +++D L+ S+S D R+W S CL N V+ V+
Sbjct: 319 KPLYEFRGHTGEVLDISWSKDNYLL-SASMDKTVRLWKVGSNDCLGVFA--HNSYVTSVQ 375
Query: 458 FSP-NGKYILAATLDNTLNYGTIA 526
F+P N Y ++ ++D + I+
Sbjct: 376 FNPVNENYFMSGSIDGKVRIWNIS 399
Score = 35.1 bits (77), Expect = 0.048
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 433
+W V + CL AH+ V++V FN + + +S S DG RIW+ + C D
Sbjct: 353 LWKVGSNDCLGVF-AHNSYVTSVQFNPVNENYFMSGSIDGKVRIWNISG--CSVVDWADL 409
Query: 434 NPPVSFVKFSPNGKYILAATLDNTLNYGTIAEE 532
+S V + P+G+ + +L+ + + ++ E
Sbjct: 410 KDIISAVCYRPDGQGGIIGSLNGSCRFFNMSGE 442
Score = 34.3 bits (75), Expect = 0.084
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 293 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 388
+ AH + A+ F+ DG + SS DG+ R+W
Sbjct: 217 IKAHDGAILAMKFSNDGKFLASSGEDGIVRVW 248
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/56 (26%), Positives = 23/56 (41%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIV 675
+LW CL + + Y F+ + +SGS D V IWN+ +V
Sbjct: 352 RLWKVGSNDCLGVFA---HNSYVTSVQFNPVNENYFMSGSIDGKVRIWNISGCSVV 404
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 56.4 bits (130), Expect = 2e-08
Identities = 24/72 (33%), Positives = 40/72 (55%)
Frame = +3
Query: 39 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 218
T+ GH + D+ WS D ++ S S D T+ +W + +G C L+GH + V ++P
Sbjct: 113 TLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIG 172
Query: 219 NLIVSGSFDESV 254
+ I S S D++V
Sbjct: 173 SFIASQSDDKTV 184
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 17/89 (19%)
Frame = +3
Query: 39 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG-----------------KCLKT 167
T+ H ++ V W+ +SR + S SDD+ +++ E G K + T
Sbjct: 54 TLRDHFGSVNCVRWAKNSRYVASGSDDQVIQIHERKPGSGTTEFGSGEAPDVENWKAVMT 113
Query: 168 LKGHSNYVFCCNFNPQSNLIVSGSFDESV 254
L+GH+ V N++P +++ SGS D +V
Sbjct: 114 LRGHTADVVDLNWSPDDSMLASGSLDNTV 142
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/82 (28%), Positives = 40/82 (48%)
Frame = +2
Query: 263 DVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 442
DV K + L H+ V ++++ D S++ S S D IW+ +G C T++
Sbjct: 104 DVENWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMC-TTVLRGHLSL 162
Query: 443 VSFVKFSPNGKYILAATLDNTL 508
V V + P G +I + + D T+
Sbjct: 163 VKGVTWDPIGSFIASQSDDKTV 184
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/58 (31%), Positives = 22/58 (37%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGH 179
IW G + GH + V W I S SDDKT+ +W S GH
Sbjct: 144 IWNMRTGMCTTVLRGHLSLVKGVTWDPIGSFIASQSDDKTVIIWRTSDWGMAHRTDGH 201
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 397
IW++RTG C L H V V ++ GS I S S D IW T+
Sbjct: 144 IWNMRTGMCTTVLRGHLSLVKGVTWDPIGSFIASQSDDKTVIIWRTS 190
Score = 32.3 bits (70), Expect = 0.34
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = +1
Query: 517 DYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHT 696
D K + T GH + + N+S + SGS DN V+IWN+++ L GH
Sbjct: 104 DVENWKAVMTLRGHTAD--VVDLNWS-PDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHL 160
Query: 697 DTV 705
V
Sbjct: 161 SLV 163
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/69 (24%), Positives = 26/69 (37%)
Frame = +1
Query: 487 GDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSK 666
G + +W+ G C GH + + + G +I S S+D V IW
Sbjct: 136 GSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWD---PIGSFIASQSDDKTVIIWRTSDW 192
Query: 667 EIVQRLSGH 693
+ R GH
Sbjct: 193 GMAHRTDGH 201
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 56.4 bits (130), Expect = 2e-08
Identities = 21/73 (28%), Positives = 46/73 (63%)
Frame = +3
Query: 42 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 221
+ GH+ ++D+ + + +VS+S DK L+VW+L + C++ + GH + V+ + +P+
Sbjct: 144 LRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEER 203
Query: 222 LIVSGSFDESVGY 260
+V+GS D+ + +
Sbjct: 204 YVVTGSADQELRF 216
Score = 54.4 bits (125), Expect = 7e-08
Identities = 28/78 (35%), Positives = 41/78 (52%)
Frame = +3
Query: 27 KFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF 206
KF ++ GHK+ + + SSD LIV+ S DK LK+W L G C K++ H + V F
Sbjct: 573 KFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKF 632
Query: 207 NPQSNLIVSGSFDESVGY 260
++ + S D V Y
Sbjct: 633 VRNTHYLFSIGKDRLVKY 650
Score = 51.2 bits (117), Expect = 7e-07
Identities = 24/84 (28%), Positives = 43/84 (51%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
KIWG G K+I H + V + ++ + S D+ +K W+ + L TL+GH
Sbjct: 607 KIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHH 666
Query: 183 NYVFCCNFNPQSNLIVSGSFDESV 254
++C + + + +V+GS D S+
Sbjct: 667 AEIWCLAISNRGDFLVTGSHDRSM 690
Score = 48.0 bits (109), Expect = 6e-06
Identities = 26/91 (28%), Positives = 43/91 (47%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+WDV L L H D V+ + F G +VSSS D R+WD + C++ ++ +
Sbjct: 132 LWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQ-IVSGHH 190
Query: 437 PPVSFVKFSPNGKYILAATLDNTLNYGTIAE 529
V V P +Y++ + D L + + E
Sbjct: 191 SEVWSVDTDPEERYVVTGSADQELRFYAVKE 221
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/76 (30%), Positives = 36/76 (47%)
Frame = +1
Query: 478 YIGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 657
Y G +R +WD +G C + HK + N G + SGS+DN + +W++
Sbjct: 83 YADGSIR----IWDTEKGTCEVNFNSHKGAVTALRYN---KVGSMLASGSKDNDIILWDV 135
Query: 658 QSKEIVQRLSGHTDTV 705
+ + RL GH D V
Sbjct: 136 VGESGLFRLRGHRDQV 151
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/84 (27%), Positives = 40/84 (47%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
IWD G C +H V+A+ +N+ GS++ S S D +WD G+ +
Sbjct: 90 IWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVV-GESGLFRLRGHR 148
Query: 437 PPVSFVKFSPNGKYILAATLDNTL 508
V+ + F GK +++++ D L
Sbjct: 149 DQVTDLVFLDGGKKLVSSSKDKFL 172
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/64 (32%), Positives = 35/64 (54%)
Frame = +3
Query: 48 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 227
GH+ + V S D+ L++S S + +K+W S+G CL+T+ S Y C PQ+
Sbjct: 404 GHRSDVRSVTLSEDNTLLMSTSHSE-VKIWNPSTGSCLRTI--DSGYGLCSLIVPQNKYG 460
Query: 228 VSGS 239
+ G+
Sbjct: 461 IVGT 464
Score = 41.5 bits (93), Expect = 6e-04
Identities = 24/74 (32%), Positives = 34/74 (45%)
Frame = +2
Query: 293 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 472
L H PV + + DG LIV+ S D +IW G C K++ + V VKF N
Sbjct: 578 LYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGD-SVMGVKFVRNT 636
Query: 473 KYILAATLDNTLNY 514
Y+ + D + Y
Sbjct: 637 HYLFSIGKDRLVKY 650
Score = 41.1 bits (92), Expect = 7e-04
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Frame = +3
Query: 6 IWGAYDGKFEKTIS------GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKT 167
IW G KT++ G + ++ +A SS S L+ D ++++W+ G C
Sbjct: 43 IWHVRQGVCSKTLTPSSSRGGPSLAVTSIA-SSASSLVAVGYADGSIRIWDTEKGTCEVN 101
Query: 168 LKGHSNYVFCCNFNPQSNLIVSGSFDESV 254
H V +N +++ SGS D +
Sbjct: 102 FNSHKGAVTALRYNKVGSMLASGSKDNDI 130
Score = 41.1 bits (92), Expect = 7e-04
Identities = 25/92 (27%), Positives = 42/92 (45%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
IW + G C K + AH D V V F R+ + S D L + WD + L TL + +
Sbjct: 608 IWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTL-EGHH 666
Query: 437 PPVSFVKFSPNGKYILAATLDNTLNYGTIAEE 532
+ + S G +++ + D ++ +EE
Sbjct: 667 AEIWCLAISNRGDFLVTGSHDRSMRRWDRSEE 698
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/61 (37%), Positives = 35/61 (57%)
Frame = +3
Query: 72 VAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 251
VA S D++ I A D T+KV+ + S K +L GH V C + + LIV+GS D++
Sbjct: 546 VAISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKN 605
Query: 252 V 254
+
Sbjct: 606 L 606
Score = 39.5 bits (88), Expect = 0.002
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSD---PVSAV-HFNRDGSLIVSSSY-DGLCRIWDTASGQCLKTL 421
IW VR G C K L S P AV S +V+ Y DG RIWDT G C +
Sbjct: 43 IWHVRQGVCSKTLTPSSSRGGPSLAVTSIASSASSLVAVGYADGSIRIWDTEKGTC-EVN 101
Query: 422 IDDDNPPVSFVKFSPNGKYILAATLDNTL 508
+ V+ ++++ G + + + DN +
Sbjct: 102 FNSHKGAVTALRYNKVGSMLASGSKDNDI 130
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = +1
Query: 511 LWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSG 690
LWD L GH+++ + + GGK +VS S+D + +W+L+++ +Q +SG
Sbjct: 132 LWDVVGESGLFRLRGHRDQ---VTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSG 188
Query: 691 HTDTV 705
H V
Sbjct: 189 HHSEV 193
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/82 (24%), Positives = 37/82 (45%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
+IW G E + HK ++ + ++ ++ S S D + +W++ L L+GH
Sbjct: 89 RIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRLRGHR 148
Query: 183 NYVFCCNFNPQSNLIVSGSFDE 248
+ V F +VS S D+
Sbjct: 149 DQVTDLVFLDGGKKLVSSSKDK 170
Score = 35.1 bits (77), Expect = 0.048
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +2
Query: 302 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 481
H V +V + D +L++S+S+ + +IW+ ++G CL+T ID S + P KY
Sbjct: 405 HRSDVRSVTLSEDNTLLMSTSHSEV-KIWNPSTGSCLRT-IDSGYGLCSLI--VPQNKYG 460
Query: 482 LAATLDNTL 508
+ T L
Sbjct: 461 IVGTKSGVL 469
Score = 31.5 bits (68), Expect = 0.59
Identities = 19/87 (21%), Positives = 37/87 (42%)
Frame = +1
Query: 457 ILTEWKIYIGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN 636
I ++ ++ + G ++ ++W G C K+ H + + V ++ S +D
Sbjct: 590 ISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDS---VMGVKFVRNTHYLFSIGKDR 646
Query: 637 LVYIWNLQSKEIVQRLSGHTDTVLCTA 717
LV W+ E + L GH + C A
Sbjct: 647 LVKYWDADKFEHLLTLEGHHAEIWCLA 673
Score = 31.1 bits (67), Expect = 0.78
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +1
Query: 553 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVL 708
GHK CI + + G+ IV+GS+D + IW L + + + H D+V+
Sbjct: 580 GHKLPVMCIDIS---SDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVM 628
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/60 (23%), Positives = 27/60 (45%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+WD+ T C++ + H V +V + + +V+ S D R + +L+ D N
Sbjct: 174 VWDLETQHCMQIVSGHHSEVWSVDTDPEERYVVTGSADQELRFYAVKEYSSNGSLVSDSN 233
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELS 146
K W A + T+ GH I +A S+ +V+ S D++++ W+ S
Sbjct: 649 KYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWDRS 696
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 55.6 bits (128), Expect = 3e-08
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 493 VRQHTQLWDYSRG-KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKE 669
+ Q +LW+ K + Y GHK ++ I + F +I SGSED+ VYIW+ + +
Sbjct: 463 LNQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYIWHRSTGK 522
Query: 670 IVQRLSGHTDTVLCTACHPT 729
++ L GH V C + PT
Sbjct: 523 LIVELPGHAGAVNCVSWSPT 542
Score = 44.4 bits (100), Expect = 8e-05
Identities = 17/72 (23%), Positives = 35/72 (48%)
Frame = +3
Query: 39 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 218
T+ GH + + WS D R +++ ++ ++ W++ SG C+ + C + P
Sbjct: 314 TLVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPISCGWYPDG 373
Query: 219 NLIVSGSFDESV 254
I++G D S+
Sbjct: 374 QGIIAGMTDRSI 385
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Frame = +3
Query: 3 KIWGAY-DGKFEKTISGHKMG---ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL 170
++W D K GHK I I S S+D + +W S+GK + L
Sbjct: 468 RLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYIWHRSTGKLIVEL 527
Query: 171 KGHSNYVFCCNFNPQS-NLIVSGSFDESV 254
GH+ V C +++P + +++ S S D ++
Sbjct: 528 PGHAGAVNCVSWSPTNLHMLASASDDGTI 556
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWEL 143
IW GK + GH ++ V+WS ++ ++ SASDD T+++W L
Sbjct: 515 IWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGL 561
Score = 36.3 bits (80), Expect = 0.021
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 293 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD-TASGQ-CLKTLIDDDNPPVSFVKFSP 466
L +H+D V + F+ +G + SSS D IW+ +A G LK + + PV + +SP
Sbjct: 270 LESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSP 329
Query: 467 NGKYILAATLDNTL 508
+ + +L + +
Sbjct: 330 DDRQVLTCGAEEVI 343
Score = 36.3 bits (80), Expect = 0.021
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 248 ECWIWDVRTGKCLKPLPAHSDPVSAVHFNRDG-SLIVSSSYDGLCRIW 388
+ +IW TGK + LP H+ V+ V ++ ++ S+S DG RIW
Sbjct: 512 QVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIW 559
Score = 35.1 bits (77), Expect = 0.048
Identities = 19/72 (26%), Positives = 35/72 (48%)
Frame = +2
Query: 293 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 472
L H PV A+ ++ D +++ + + R WD SG C+ P+S + P+G
Sbjct: 315 LVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPIS-CGWYPDG 373
Query: 473 KYILAATLDNTL 508
+ I+A D ++
Sbjct: 374 QGIIAGMTDRSI 385
Score = 31.5 bits (68), Expect = 0.59
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +1
Query: 487 GDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 657
G +W S GK + GH C+ ++S T + S S+D + IW L
Sbjct: 507 GSEDSQVYIWHRSTGKLIVELPGHAGAVNCV--SWSPTNLHMLASASDDGTIRIWGL 561
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/74 (21%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +3
Query: 42 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLK---TLKGHSNYVFCCNFNP 212
+ H + + +S + + + S+S D+T +WE+S+ + TL GH V ++P
Sbjct: 270 LESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSP 329
Query: 213 QSNLIVSGSFDESV 254
+++ +E +
Sbjct: 330 DDRQVLTCGAEEVI 343
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 55.6 bits (128), Expect = 3e-08
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Frame = +3
Query: 48 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNL 224
GH I D++WS L+ S+S D+T+++W + +CL+T H+N+V C FNP N
Sbjct: 320 GHIGEILDLSWSEKGYLL-SSSVDETVRLWRVGCDECLRTFT-HNNFVTCVAFNPVDDNY 377
Query: 225 IVSGSFDESV 254
+SGS D V
Sbjct: 378 FISGSIDGKV 387
Score = 38.3 bits (85), Expect = 0.005
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 433
+W V +CL+ H++ V+ V FN D + +S S DG RIWD +C D
Sbjct: 347 LWRVGCDECLRTF-THNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVT--RCRVVDYTDI 403
Query: 434 NPPVSFVKFSPNGKYILAATLDNTLNYGTIAEENV 538
V+ V + P+ K + ++ + I E +
Sbjct: 404 RDIVTAVCYRPDAKGAVIGSMTGNCRFYHIFENQL 438
Score = 35.9 bits (79), Expect = 0.028
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +1
Query: 481 IGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ 660
+ V + +LW +CL+T+T H N C+ F+ + +SGS D V IW++
Sbjct: 337 LSSSVDETVRLWRVGCDECLRTFT-HNNFVTCVA--FNPVDDNYFISGSIDGKVRIWDVT 393
Query: 661 SKEIV 675
+V
Sbjct: 394 RCRVV 398
Score = 31.5 bits (68), Expect = 0.59
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 278 KCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 457
K L H + + ++ G L+ SSS D R+W +CL+T N V+ V
Sbjct: 313 KPLHEFKGHIGEILDLSWSEKGYLL-SSSVDETVRLWRVGCDECLRTF--THNNFVTCVA 369
Query: 458 FSP-NGKYILAATLD 499
F+P + Y ++ ++D
Sbjct: 370 FNPVDDNYFISGSID 384
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 398 SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLNYGTIAEE 532
S C+ + + +KFSP+GKYI +A D + +I EE
Sbjct: 206 SSMCIDQEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVWSITEE 250
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 299 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 388
AH + A+ F+ DG I S+ D + R+W
Sbjct: 216 AHDGSILAMKFSPDGKYIASAGEDCVVRVW 245
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +3
Query: 33 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELS 146
++ S H I + +S D + I SA +D ++VW ++
Sbjct: 211 DQEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVWSIT 248
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 55.6 bits (128), Expect = 3e-08
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Frame = +3
Query: 48 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNL 224
GH I D++WS L+ S+S D+T+++W + +CL+T H+N+V C FNP N
Sbjct: 320 GHIGEILDLSWSEKGYLL-SSSVDETVRLWRVGCDECLRTFT-HNNFVTCVAFNPVDDNY 377
Query: 225 IVSGSFDESV 254
+SGS D V
Sbjct: 378 FISGSIDGKV 387
Score = 38.3 bits (85), Expect = 0.005
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 433
+W V +CL+ H++ V+ V FN D + +S S DG RIWD +C D
Sbjct: 347 LWRVGCDECLRTF-THNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVT--RCRVVDYTDI 403
Query: 434 NPPVSFVKFSPNGKYILAATLDNTLNYGTIAEENV 538
V+ V + P+ K + ++ + I E +
Sbjct: 404 RDIVTAVCYRPDAKGAVIGSMTGNCRFYHIFENQL 438
Score = 35.9 bits (79), Expect = 0.028
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +1
Query: 481 IGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ 660
+ V + +LW +CL+T+T H N C+ F+ + +SGS D V IW++
Sbjct: 337 LSSSVDETVRLWRVGCDECLRTFT-HNNFVTCVA--FNPVDDNYFISGSIDGKVRIWDVT 393
Query: 661 SKEIV 675
+V
Sbjct: 394 RCRVV 398
Score = 31.5 bits (68), Expect = 0.59
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 278 KCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 457
K L H + + ++ G L+ SSS D R+W +CL+T N V+ V
Sbjct: 313 KPLHEFKGHIGEILDLSWSEKGYLL-SSSVDETVRLWRVGCDECLRTF--THNNFVTCVA 369
Query: 458 FSP-NGKYILAATLD 499
F+P + Y ++ ++D
Sbjct: 370 FNPVDDNYFISGSID 384
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 398 SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLNYGTIAEE 532
S C+ + + +KFSP+GKYI +A D + +I EE
Sbjct: 206 SSMCIDQEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVWSITEE 250
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 299 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 388
AH + A+ F+ DG I S+ D + R+W
Sbjct: 216 AHDGSILAMKFSPDGKYIASAGEDCVVRVW 245
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +3
Query: 33 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELS 146
++ S H I + +S D + I SA +D ++VW ++
Sbjct: 211 DQEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVWSIT 248
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 55.2 bits (127), Expect = 4e-08
Identities = 24/69 (34%), Positives = 40/69 (57%)
Frame = +3
Query: 48 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 227
GH ++ V +S DS+L+ + +DD +KVW + SG C T H+N V +F ++ +
Sbjct: 347 GHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSL 406
Query: 228 VSGSFDESV 254
+S S D +V
Sbjct: 407 LSASLDGTV 415
Score = 54.8 bits (126), Expect = 6e-08
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Frame = +2
Query: 248 ECWIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT-ASGQCLKTLI 424
E ++W +TG+ L H PV + F+ L+ SSS+D R+WD AS ++T
Sbjct: 458 EIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETF- 516
Query: 425 DDDNPPVSFVKFSPNGKYILAATLDNTLNY 514
N V V F P+GK + ++TLD +N+
Sbjct: 517 -RHNHDVLTVAFRPDGKQLASSTLDGQINF 545
Score = 52.4 bits (120), Expect = 3e-07
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+W+V +G C H++ V+A+HF D ++S+S DG R WD + KT
Sbjct: 375 VWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTP-- 432
Query: 437 PPVSFVKFS--PNGKYILAATLDN 502
P FV + P+G + A TLD+
Sbjct: 433 TPRQFVSLTADPSGDVVCAGTLDS 456
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/84 (27%), Positives = 42/84 (50%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+WD RT + H V+ V ++ D L+ + + D ++W+ SG C T + N
Sbjct: 333 VWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTN 392
Query: 437 PPVSFVKFSPNGKYILAATLDNTL 508
V+ + F + +L+A+LD T+
Sbjct: 393 -AVTALHFMADNHSLLSASLDGTV 415
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/85 (22%), Positives = 43/85 (50%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSN 185
+W G+ + +SGH+ + + +S ++L+ S+S D T+++W++ + K H++
Sbjct: 461 VWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNH 520
Query: 186 YVFCCNFNPQSNLIVSGSFDESVGY 260
V F P + S + D + +
Sbjct: 521 DVLTVAFRPDGKQLASSTLDGQINF 545
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 421
+WDV K H+ V V F DG + SS+ DG WDT G + T+
Sbjct: 503 LWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTI 557
Score = 36.3 bits (80), Expect = 0.021
Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
K+W G T + H ++ + + +D+ ++SAS D T++ W+ K KT +
Sbjct: 374 KVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPT 433
Query: 183 NYVF-CCNFNPQSNLIVSGSFD 245
F +P +++ +G+ D
Sbjct: 434 PRQFVSLTADPSGDVVCAGTLD 455
Score = 32.3 bits (70), Expect = 0.34
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +1
Query: 514 WDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNL-VYIWNLQSKEIVQRLSG 690
WD+ R K KTYT ++ + G + +G+ D+ +++W+ ++ +I LSG
Sbjct: 418 WDFKRYKNYKTYTTPTPRQFVSLT--ADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSG 475
Query: 691 H 693
H
Sbjct: 476 H 476
Score = 31.9 bits (69), Expect = 0.45
Identities = 19/71 (26%), Positives = 34/71 (47%)
Frame = +1
Query: 511 LWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSG 690
+WD+ + GH + C+ +S + + +G++DN V +WN+ S +
Sbjct: 333 VWDWRTETYILKQQGHYFDVNCV--TYS-PDSQLLATGADDNKVKVWNVMSGTCFITFTE 389
Query: 691 HTDTVLCTACH 723
HT+ V TA H
Sbjct: 390 HTNAV--TALH 398
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +3
Query: 114 DDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 254
D + VW +G+ L GH V F+P + L+ S S+D +V
Sbjct: 455 DSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTV 501
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 126 LKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 254
L VW+ + + +GH V C ++P S L+ +G+ D V
Sbjct: 331 LLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKV 373
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 55.2 bits (127), Expect = 4e-08
Identities = 24/69 (34%), Positives = 40/69 (57%)
Frame = +3
Query: 48 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 227
GH ++ V +S DS+L+ + +DD +KVW + SG C T H+N V +F ++ +
Sbjct: 387 GHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSL 446
Query: 228 VSGSFDESV 254
+S S D +V
Sbjct: 447 LSASLDGTV 455
Score = 54.8 bits (126), Expect = 6e-08
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Frame = +2
Query: 248 ECWIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT-ASGQCLKTLI 424
E ++W +TG+ L H PV + F+ L+ SSS+D R+WD AS ++T
Sbjct: 498 EIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETF- 556
Query: 425 DDDNPPVSFVKFSPNGKYILAATLDNTLNY 514
N V V F P+GK + ++TLD +N+
Sbjct: 557 -RHNHDVLTVAFRPDGKQLASSTLDGQINF 585
Score = 52.4 bits (120), Expect = 3e-07
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+W+V +G C H++ V+A+HF D ++S+S DG R WD + KT
Sbjct: 415 VWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTP-- 472
Query: 437 PPVSFVKFS--PNGKYILAATLDN 502
P FV + P+G + A TLD+
Sbjct: 473 TPRQFVSLTADPSGDVVCAGTLDS 496
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/84 (27%), Positives = 42/84 (50%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+WD RT + H V+ V ++ D L+ + + D ++W+ SG C T + N
Sbjct: 373 VWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTN 432
Query: 437 PPVSFVKFSPNGKYILAATLDNTL 508
V+ + F + +L+A+LD T+
Sbjct: 433 -AVTALHFMADNHSLLSASLDGTV 455
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/85 (22%), Positives = 43/85 (50%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSN 185
+W G+ + +SGH+ + + +S ++L+ S+S D T+++W++ + K H++
Sbjct: 501 VWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNH 560
Query: 186 YVFCCNFNPQSNLIVSGSFDESVGY 260
V F P + S + D + +
Sbjct: 561 DVLTVAFRPDGKQLASSTLDGQINF 585
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 421
+WDV K H+ V V F DG + SS+ DG WDT G + T+
Sbjct: 543 LWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTI 597
Score = 36.3 bits (80), Expect = 0.021
Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
K+W G T + H ++ + + +D+ ++SAS D T++ W+ K KT +
Sbjct: 414 KVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPT 473
Query: 183 NYVF-CCNFNPQSNLIVSGSFD 245
F +P +++ +G+ D
Sbjct: 474 PRQFVSLTADPSGDVVCAGTLD 495
Score = 32.3 bits (70), Expect = 0.34
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +1
Query: 514 WDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNL-VYIWNLQSKEIVQRLSG 690
WD+ R K KTYT ++ + G + +G+ D+ +++W+ ++ +I LSG
Sbjct: 458 WDFKRYKNYKTYTTPTPRQFVSLT--ADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSG 515
Query: 691 H 693
H
Sbjct: 516 H 516
Score = 31.9 bits (69), Expect = 0.45
Identities = 19/71 (26%), Positives = 34/71 (47%)
Frame = +1
Query: 511 LWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSG 690
+WD+ + GH + C+ +S + + +G++DN V +WN+ S +
Sbjct: 373 VWDWRTETYILKQQGHYFDVNCV--TYS-PDSQLLATGADDNKVKVWNVMSGTCFITFTE 429
Query: 691 HTDTVLCTACH 723
HT+ V TA H
Sbjct: 430 HTNAV--TALH 438
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +3
Query: 114 DDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 254
D + VW +G+ L GH V F+P + L+ S S+D +V
Sbjct: 495 DSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTV 541
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 126 LKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 254
L VW+ + + +GH V C ++P S L+ +G+ D V
Sbjct: 371 LLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKV 413
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 54.8 bits (126), Expect = 6e-08
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Frame = +3
Query: 6 IWGAYDGKFE--KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK---CLKTL 170
IW Y +FE T+ GH+ + V+W++ + + S DK++ +WE+ G C L
Sbjct: 100 IWKNYGSEFECISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVL 159
Query: 171 KGHSNYVFCCNFNPQSNLIVSGSFDESV 254
GH+ V ++P +++ S S+D ++
Sbjct: 160 TGHTQDVKMVQWHPTMDVLFSCSYDNTI 187
Score = 46.0 bits (104), Expect = 3e-05
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +3
Query: 51 HKMGISDVAWSSDSRLIVSASDDKTLKVWEL--SSGKCLKTLKGHSNYVFCCNFNPQSNL 224
H + AWS +L+ +AS D T +W+ S +C+ TL+GH N V ++N +
Sbjct: 73 HTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSC 132
Query: 225 IVSGSFDESV 254
+ + S D+SV
Sbjct: 133 LATCSRDKSV 142
Score = 42.3 bits (95), Expect = 3e-04
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Frame = +2
Query: 254 WIWDVRTGK---CLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW----DTASGQCL 412
WIW+V G C L H+ V V ++ ++ S SYD ++W D QC+
Sbjct: 143 WIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVWWSEDDDGEYQCV 202
Query: 413 KTLIDDDN---PPVSFVKFSPNGKYILAATLDNTLN-YGT 520
+TL + +N V + F+ G ++ + D TL +GT
Sbjct: 203 QTLGESNNGHSSTVWSISFNAAGDKMVTCSDDLTLKIWGT 242
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Frame = +3
Query: 6 IWGAYDGK---FEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVW--ELSSG--KCLK 164
IW +G ++GH + V W ++ S S D T+KVW E G +C++
Sbjct: 144 IWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVWWSEDDDGEYQCVQ 203
Query: 165 TL----KGHSNYVFCCNFNPQSNLIVSGSFD 245
TL GHS+ V+ +FN + +V+ S D
Sbjct: 204 TLGESNNGHSSTVWSISFNAAGDKMVTCSDD 234
Score = 38.7 bits (86), Expect = 0.004
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Frame = +1
Query: 505 TQLW-DY-SRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN-LQSKE-- 669
T +W +Y S +C+ T GH+NE + N S G + + S D V+IW L+ E
Sbjct: 98 TGIWKNYGSEFECISTLEGHENEVKSVSWNAS---GSCLATCSRDKSVWIWEVLEGNEYD 154
Query: 670 IVQRLSGHTDTVLCTACHPT 729
L+GHT V HPT
Sbjct: 155 CAAVLTGHTQDVKMVQWHPT 174
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +2
Query: 278 KCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNPPVSF 451
+C+ L H + V +V +N GS + + S D IW+ G ++ V
Sbjct: 109 ECISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKM 168
Query: 452 VKFSPNGKYILAATLDNTL 508
V++ P + + + DNT+
Sbjct: 169 VQWHPTMDVLFSCSYDNTI 187
Score = 34.7 bits (76), Expect = 0.064
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Frame = +3
Query: 36 KTISGHKMGISDVAWS--SDSRLIVSASDDKTLKVWELSS 149
K H+ ++ V WS +RL+ SASDD +K+W+L++
Sbjct: 311 KKNKAHENDVNSVQWSPGEGNRLLASASDDGMVKIWQLAT 350
Score = 32.7 bits (71), Expect = 0.26
Identities = 19/80 (23%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +2
Query: 302 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT--ASGQCLKTLIDDDNPPVSFVKFSPNGK 475
H+ V + ++ G L+ ++S+DG IW + +C+ TL +N V V ++ +G
Sbjct: 73 HTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHEN-EVKSVSWNASGS 131
Query: 476 YILAATLDNTLNYGTIAEEN 535
+ + D ++ + E N
Sbjct: 132 CLATCSRDKSVWIWEVLEGN 151
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/82 (25%), Positives = 45/82 (54%), Gaps = 12/82 (14%)
Frame = +3
Query: 45 SGHKMGISDVAWSSDSRLIVSASDDKTLKVW-----ELSSGK------CLKTLKG-HSNY 188
+GH + +++++ +V+ SDD TLK+W ++ SG+ L TL G H
Sbjct: 210 NGHSSTVWSISFNAAGDKMVTCSDDLTLKIWGTDIAKMQSGEEYAPWIHLCTLSGYHDRT 269
Query: 189 VFCCNFNPQSNLIVSGSFDESV 254
++ +++ + ++I SG+ D ++
Sbjct: 270 IYSAHWS-RDDIIASGAGDNAI 290
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Frame = +2
Query: 284 LKPLPAHSDPVSAVHFNR-DGS-LIVSSSYDGLCRIWDTAS 400
LK AH + V++V ++ +G+ L+ S+S DG+ +IW A+
Sbjct: 310 LKKNKAHENDVNSVQWSPGEGNRLLASASDDGMVKIWQLAT 350
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 53.6 bits (123), Expect = 1e-07
Identities = 27/84 (32%), Positives = 44/84 (52%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
K+W A GK + +GH+ + +A+S + I S S DK++ +W + GK +KT G+
Sbjct: 524 KLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTYTGNG 583
Query: 183 NYVFCCNFNPQSNLIVSGSFDESV 254
C +N + N I + D SV
Sbjct: 584 GIFEVC-WNKEGNKIAACFADNSV 606
Score = 52.8 bits (121), Expect = 2e-07
Identities = 31/107 (28%), Positives = 46/107 (42%), Gaps = 9/107 (8%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWS---------SDSRLIVSASDDKTLKVWELSSGK 155
KIW F + H I + WS + + SAS D T+K+W+ GK
Sbjct: 473 KIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGK 532
Query: 156 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVGYGM*EQGNV*NHY 296
L + GH V+ F+P I SGS D+S+ ++G + Y
Sbjct: 533 MLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTY 579
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/103 (24%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGS---------LIVSSSYDGLCRIWDTASGQC 409
IW+++ + L H+ + + ++ G + S+S+D ++WD G+
Sbjct: 474 IWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKM 533
Query: 410 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLNYGTIAEENV 538
L + + PV + FSPNG+YI + +LD +++ +I E +
Sbjct: 534 LCSF-NGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKI 575
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/84 (30%), Positives = 39/84 (46%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+WD GK L H +PV ++ F+ +G I S S D IW G+ +KT N
Sbjct: 525 LWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTY--TGN 582
Query: 437 PPVSFVKFSPNGKYILAATLDNTL 508
+ V ++ G I A DN++
Sbjct: 583 GGIFEVCWNKEGNKIAACFADNSV 606
Score = 46.0 bits (104), Expect = 3e-05
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +3
Query: 36 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 212
KT +GH+ ++ V W L+ S SDD T K+W + + L+ H+ ++ ++P
Sbjct: 442 KTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSP 500
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/62 (35%), Positives = 38/62 (61%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLS 687
+LWD GK L ++ GH+ Y + FS G++I SGS D ++IW+++ +IV+ +
Sbjct: 524 KLWDAELGKMLCSFNGHREPVYSLA--FS-PNGEYIASGSLDKSIHIWSIKEGKIVKTYT 580
Query: 688 GH 693
G+
Sbjct: 581 GN 582
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/63 (23%), Positives = 35/63 (55%)
Frame = +3
Query: 63 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 242
++ + W+ + L+ + S D ++W L +G+ + TL H +F +N + + +++GS
Sbjct: 327 VTTLDWNGEGTLLATGSCDGQARIWTL-NGELISTLSKHKGPIFSLKWNKKGDYLLTGSV 385
Query: 243 DES 251
D +
Sbjct: 386 DRT 388
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +1
Query: 541 KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTAC 720
KT+TGH+ E C+ + TG + S S+D+ IWN++ V L HT +
Sbjct: 442 KTFTGHQGEVNCV--KWDPTGSL-LASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRW 498
Query: 721 HPT 729
PT
Sbjct: 499 SPT 501
Score = 34.7 bits (76), Expect = 0.064
Identities = 16/60 (26%), Positives = 32/60 (53%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
+IW +G+ T+S HK I + W+ +++ S D+T VW++ + + + + HS
Sbjct: 349 RIW-TLNGELISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHS 407
Score = 34.3 bits (75), Expect = 0.084
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 36 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG 152
+ + GH + AWS + L+ S S D T ++W + G
Sbjct: 259 RILEGHTSEVCACAWSPSASLLASGSGDATARIWSIPEG 297
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = +2
Query: 287 KPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 466
K H V+ V ++ GSL+ S S D +IW+ + L + + +++SP
Sbjct: 442 KTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDL-REHTKEIYTIRWSP 500
Query: 467 NG 472
G
Sbjct: 501 TG 502
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +3
Query: 159 LKTLKGHSNYVFCCNFNPQSNLIVSGSFD 245
++ L+GH++ V C ++P ++L+ SGS D
Sbjct: 258 VRILEGHTSEVCACAWSPSASLLASGSGD 286
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +3
Query: 51 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYV-FCCNFNPQSNLI 227
H I D++W +++AS D+T+KVW++ KC L GH+ V C+ S+L+
Sbjct: 127 HYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLL 186
Query: 228 VSGSFD 245
VSGS D
Sbjct: 187 VSGSRD 192
Score = 34.3 bits (75), Expect = 0.084
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWD 391
+WDV KC L H+ V ++ + S L+VS S DG +WD
Sbjct: 154 VWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWD 199
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +1
Query: 595 VTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTACHPT 729
+ G +++ S D + +W+++ + L GHT TV HPT
Sbjct: 137 IKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPT 181
Score = 32.7 bits (71), Expect = 0.26
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 42 ISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKC 158
+ GH ++ V WS S+ + +ASDD T+++W + + C
Sbjct: 377 LKGHDFEVTAVDWSPSEIGKVATASDDFTVRLWNIENNIC 416
Score = 31.9 bits (69), Expect = 0.45
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +1
Query: 499 QHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSK 666
Q ++WD KC GH + ++ T +VSGS D +W+L+ K
Sbjct: 150 QTIKVWDVEENKCTGVLIGHTGTVKSMCSH--PTNSDLLVSGSRDGCFALWDLRCK 203
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/65 (23%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +1
Query: 538 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQ-RLSGHTDTVLCT 714
+++++G + + + + S G++++SGS D YIW + ++ L GH V
Sbjct: 329 VQSFSGCRIDSFFVRTMIS-PDGEYVLSGSSDGNAYIWQVNKPQVDPIILKGHDFEVTAV 387
Query: 715 ACHPT 729
P+
Sbjct: 388 DWSPS 392
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+WD++TGK L + HS V++V +R+G+ I++S D + ++DT + + TL N
Sbjct: 383 LWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTRTLEICGTLRASGN 442
Query: 437 PPVSFVK---FSPNGKYILAATLDNTLNYGTIAEENV 538
S SP+ Y+ A + D +++ ++++ N+
Sbjct: 443 RLASNWSRSCISPDDDYVAAGSADGSVHVWSLSKGNI 479
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/85 (29%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
K+W G K++ G I D+A + D++ +++A+ L VW++SSG+ TL GH+
Sbjct: 256 KMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSGRVRHTLTGHT 315
Query: 183 NYVFCCNFNP-QSNLIVSGSFDESV 254
+ V + + S +VS ++D ++
Sbjct: 316 DKVCAVDVSKFSSRHVVSAAYDRTI 340
Score = 48.8 bits (111), Expect = 4e-06
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 WIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSL-IVSSSYDGLCRIWDTASGQCLKTLIDD 430
++WDV +G+ L H+D V AV ++ S +VS++YD ++WD G C T++
Sbjct: 298 FVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVLFT 357
Query: 431 DNPPVSFVKFSPNGKYILAATLDNTL 508
N + + S +G + + +D L
Sbjct: 358 SN--CNAICLSIDGLTVFSGHMDGNL 381
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSS-DSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
+W G+ T++GH + V S SR +VSA+ D+T+K+W+L G C T+ S
Sbjct: 299 VWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVLFTS 358
Query: 183 NYVFCC 200
N C
Sbjct: 359 NCNAIC 364
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/81 (24%), Positives = 37/81 (45%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
K+W + G T+ + + S D + S D L++W++ +GK L + GHS
Sbjct: 341 KLWDLHKGYCTNTVL-FTSNCNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHS 399
Query: 183 NYVFCCNFNPQSNLIVSGSFD 245
+ V + + N I++ D
Sbjct: 400 SAVTSVSLSRNGNRILTSGRD 420
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +1
Query: 475 IYIGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVT-GGKWIVSGSEDNLVYIW 651
++ GG R ++WD + G +K+ G + +VT K +++ + N +++W
Sbjct: 246 LFTGGQDRA-VKMWDTNSGTLIKSLYGSLGN----ILDMAVTHDNKSVIAATSSNNLFVW 300
Query: 652 NLQSKEIVQRLSGHTDTV 705
++ S + L+GHTD V
Sbjct: 301 DVSSGRVRHTLTGHTDKV 318
Score = 37.9 bits (84), Expect = 0.007
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGH- 179
++W GK ++GH ++ V+ S + I+++ D V++ + + TL+
Sbjct: 382 RLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTRTLEICGTLRASG 441
Query: 180 ----SNYVFCCNFNPQSNLIVSGSFDESVGYGM*EQGNV 284
SN+ C +P + + +GS D SV +GN+
Sbjct: 442 NRLASNWSRSC-ISPDDDYVAAGSADGSVHVWSLSKGNI 479
Score = 34.7 bits (76), Expect = 0.064
Identities = 23/101 (22%), Positives = 41/101 (40%)
Frame = +2
Query: 281 CLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF 460
C + AH ++ F + + + D ++WDT SG +K+L +
Sbjct: 223 CANRIHAHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVT 282
Query: 461 SPNGKYILAATLDNTLNYGTIAEENV*RHIRDTRTKNIVSL 583
N K ++AAT N L ++ V RH T + ++
Sbjct: 283 HDN-KSVIAATSSNNLFVWDVSSGRV-RHTLTGHTDKVCAV 321
Score = 34.7 bits (76), Expect = 0.064
Identities = 18/66 (27%), Positives = 33/66 (50%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLS 687
+LWD +G C T N C S+ G + SG D + +W++Q+ +++ ++
Sbjct: 341 KLWDLHKGYCTNTVLFTSN---CNAICLSIDG-LTVFSGHMDGNLRLWDIQTGKLLSEVA 396
Query: 688 GHTDTV 705
GH+ V
Sbjct: 397 GHSSAV 402
Score = 34.3 bits (75), Expect = 0.084
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +3
Query: 81 SSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFN 209
S D + + S D ++ VW LS G + LK ++ + CC+++
Sbjct: 454 SPDDDYVAAGSADGSVHVWSLSKGNIVSILKEQTSPILCCSWS 496
Score = 31.9 bits (69), Expect = 0.45
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 610 WIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLC 711
++ +GS D V++W+L IV L T +LC
Sbjct: 459 YVAAGSADGSVHVWSLSKGNIVSILKEQTSPILC 492
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +1
Query: 487 GDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSK 666
G + + +LWD GK L GH + + + S G + + SG DN+ +++ ++
Sbjct: 375 GHMDGNLRLWDIQTGKLLSEVAGHSSAVTSV--SLSRNGNRILTSG-RDNVHNVFDTRTL 431
Query: 667 EI 672
EI
Sbjct: 432 EI 433
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Frame = +3
Query: 48 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNL 224
GH I D++WS ++RL+ SAS D ++++W++ CL + H+NYV FNP +
Sbjct: 354 GHSGDILDISWSKNNRLL-SASVDNSVRLWQIGCEDCL-GIFSHNNYVTSVQFNPVDDDH 411
Query: 225 IVSGSFDESV 254
+SGS D V
Sbjct: 412 FISGSIDGKV 421
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 547 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 654
Y G +N I A+F+ G K IVS +D+ VY+WN
Sbjct: 529 YKGSRNAGNQISASFTADG-KHIVSACDDSSVYVWN 563
Score = 31.5 bits (68), Expect = 0.59
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +2
Query: 293 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 406
+ AH + A+ F+ DG + S+ DG+ R+W +
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDE 284
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/65 (26%), Positives = 26/65 (40%)
Frame = +1
Query: 481 IGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ 660
+ V +LW CL ++ H N Y F+ +SGS D V IW+
Sbjct: 371 LSASVDNSVRLWQIGCEDCLGIFS-HNN--YVTSVQFNPVDDDHFISGSIDGKVRIWSAS 427
Query: 661 SKEIV 675
++V
Sbjct: 428 QCQVV 432
Score = 27.9 bits (59), Expect = 7.3
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +2
Query: 278 KCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 457
K L HS + + ++++ L+ S+S D R+W CL I N V+ V+
Sbjct: 347 KPLHEFLGHSGDILDISWSKNNRLL-SASVDNSVRLWQIGCEDCLG--IFSHNNYVTSVQ 403
Query: 458 FSP-NGKYILAATLD 499
F+P + + ++ ++D
Sbjct: 404 FNPVDDDHFISGSID 418
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 452 VKFSPNGKYILAATLDNTLNYGTIAEE 532
+KFSP+G+Y+ +A D L ++ E+
Sbjct: 257 MKFSPDGRYLASAGEDGVLRVWSVVED 283
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Frame = +3
Query: 48 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNL 224
GH I D++WS ++RL+ SAS D ++++W++ CL + H+NYV FNP +
Sbjct: 354 GHSGDILDISWSKNNRLL-SASVDNSVRLWQIGCEDCL-GIFSHNNYVTSVQFNPVDDDH 411
Query: 225 IVSGSFDESV 254
+SGS D V
Sbjct: 412 FISGSIDGKV 421
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 547 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 654
Y G +N I A+F+ G K IVS +D+ VY+WN
Sbjct: 525 YKGSRNAGNQISASFTADG-KHIVSACDDSSVYVWN 559
Score = 31.5 bits (68), Expect = 0.59
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +2
Query: 293 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 406
+ AH + A+ F+ DG + S+ DG+ R+W +
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDE 284
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/65 (26%), Positives = 26/65 (40%)
Frame = +1
Query: 481 IGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ 660
+ V +LW CL ++ H N Y F+ +SGS D V IW+
Sbjct: 371 LSASVDNSVRLWQIGCEDCLGIFS-HNN--YVTSVQFNPVDDDHFISGSIDGKVRIWSAS 427
Query: 661 SKEIV 675
++V
Sbjct: 428 QCQVV 432
Score = 27.9 bits (59), Expect = 7.3
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +2
Query: 278 KCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 457
K L HS + + ++++ L+ S+S D R+W CL I N V+ V+
Sbjct: 347 KPLHEFLGHSGDILDISWSKNNRLL-SASVDNSVRLWQIGCEDCLG--IFSHNNYVTSVQ 403
Query: 458 FSP-NGKYILAATLD 499
F+P + + ++ ++D
Sbjct: 404 FNPVDDDHFISGSID 418
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 452 VKFSPNGKYILAATLDNTLNYGTIAEE 532
+KFSP+G+Y+ +A D L ++ E+
Sbjct: 257 MKFSPDGRYLASAGEDGVLRVWSVVED 283
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/71 (35%), Positives = 40/71 (56%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
KIW + GH+ I+D+A SS++ L+ SAS+D ++VW L G + L+GH+
Sbjct: 330 KIWSMETALCLASCRGHEGDITDLAVSSNNALVASASNDFVIRVWRLPDGMPISVLRGHT 389
Query: 183 NYVFCCNFNPQ 215
V F+P+
Sbjct: 390 GAVTAIAFSPR 400
Score = 44.8 bits (101), Expect = 6e-05
Identities = 17/70 (24%), Positives = 35/70 (50%)
Frame = +3
Query: 36 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 215
K + GH+ + + R +++ SDD+ +K+W + + CL + +GH + +
Sbjct: 299 KKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSN 358
Query: 216 SNLIVSGSFD 245
+ L+ S S D
Sbjct: 359 NALVASASND 368
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/52 (32%), Positives = 31/52 (59%)
Frame = +1
Query: 538 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGH 693
+K GH+N YC + S G+++++GS+D LV IW++++ + GH
Sbjct: 298 IKKLRGHRNAVYCAIFDRS---GRYVITGSDDRLVKIWSMETALCLASCRGH 346
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 60 GISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSG 236
G++ + WS D+R +++A D + VW + G + L GHS + + +P + +S
Sbjct: 599 GVNMIIWSLDNRFVLAAIMDCRICVWNAADGSLVHCLTGHSESSYVLDVHPFNPRIAMSA 658
Query: 237 SFD 245
+D
Sbjct: 659 GYD 661
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFN-RDGSL--IVSSSYDGLCRIWDTASGQCL 412
+W + G + L H+ V+A+ F+ R S+ ++SSS DG CRIWD Q L
Sbjct: 373 VWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWDARYSQWL 427
Score = 36.3 bits (80), Expect = 0.021
Identities = 17/70 (24%), Positives = 34/70 (48%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
IW + T CL H ++ + + + +L+ S+S D + R+W G + +++
Sbjct: 331 IWSMETALCLASCRGHEGDITDLAVSSNNALVASASNDFVIRVWRLPDGMPI-SVLRGHT 389
Query: 437 PPVSFVKFSP 466
V+ + FSP
Sbjct: 390 GAVTAIAFSP 399
Score = 34.3 bits (75), Expect = 0.084
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = +1
Query: 475 IYIGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIV-SGSEDNLVYIW 651
+ G D R ++W CL + GH+ + + +V+ +V S S D ++ +W
Sbjct: 320 VITGSDDRL-VKIWSMETALCLASCRGHEGD----ITDLAVSSNNALVASASNDFVIRVW 374
Query: 652 NLQSKEIVQRLSGHTDTVLCTACHP 726
L + L GHT V A P
Sbjct: 375 RLPDGMPISVLRGHTGAVTAIAFSP 399
Score = 34.3 bits (75), Expect = 0.084
Identities = 22/101 (21%), Positives = 43/101 (42%), Gaps = 18/101 (17%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI---VSASDDKTLKVWELSSGKCLKTL- 170
++W DG + GH ++ +A+S + +S+SDD T ++W+ + L +
Sbjct: 372 RVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWDARYSQWLPRIY 431
Query: 171 --------------KGHSNYVFCCNFNPQSNLIVSGSFDES 251
S+ + CC +N + V+GS D +
Sbjct: 432 VPSPSDANTGSTSNASQSHQILCCAYNANGTIFVTGSSDSN 472
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/72 (25%), Positives = 34/72 (47%)
Frame = +2
Query: 284 LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 463
+K L H + V F+R G +++ S D L +IW + CL + + ++ + S
Sbjct: 298 IKKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEG-DITDLAVS 356
Query: 464 PNGKYILAATLD 499
N + +A+ D
Sbjct: 357 SNNALVASASND 368
Score = 31.5 bits (68), Expect = 0.59
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 159 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 254
+K L+GH N V+C F+ +++GS D V
Sbjct: 298 IKKLRGHRNAVYCAIFDRSGRYVITGSDDRLV 329
Score = 27.9 bits (59), Expect = 7.3
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDP--VSAVH-FNRDGSLIVSSSYDGLCRIWDTASGQCLK 415
+W+ G + L HS+ V VH FN + +S+ YDG IWD G +K
Sbjct: 623 VWNAADGSLVHCLTGHSESSYVLDVHPFNP--RIAMSAGYDGKTIIWDIWEGIPIK 676
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 52.8 bits (121), Expect = 2e-07
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +3
Query: 75 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDES 251
A+SSD R + S D T+K+ + +GKCLK L GH + F+P+ S ++ SGS D
Sbjct: 110 AFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHE 169
Query: 252 V 254
V
Sbjct: 170 V 170
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 433
I D TGKCLK L H V F+ R ++ S S D R+W+ +G+C++T D
Sbjct: 129 IIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEVRLWNAKTGECIRT--HDF 186
Query: 434 NPPVSFVKFSPNGKYILAAT 493
P++ + F G+ + A+
Sbjct: 187 YRPIASIAFHAGGELLAVAS 206
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 502 HT-QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQ 678
HT ++ D GKCLK TGH+ + + F + + SGS D+ V +WN ++ E ++
Sbjct: 125 HTVKIIDCETGKCLKILTGHRRTPWVV--RFHPRHSEIVASGSLDHEVRLWNAKTGECIR 182
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSS-DSRLIVSASDDKTLKVWELSSGKCLKT 167
KI GK K ++GH+ V + S ++ S S D +++W +G+C++T
Sbjct: 128 KIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEVRLWNAKTGECIRT 183
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +2
Query: 248 ECWIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG--QCLKTL 421
E +W+ +TG+C++ + P++++ F+ G L+ +S L IW G +
Sbjct: 169 EVRLWNAKTGECIRTHDFYR-PIASIAFHAGGELLAVASGHKL-HIWHYNKGGDDSAPAI 226
Query: 422 IDDDNPPVSFVKFSPNGKYIL 484
+ + V F P+G +L
Sbjct: 227 VLKTRRSLRAVHFHPHGVPLL 247
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 52.8 bits (121), Expect = 2e-07
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +3
Query: 75 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDES 251
A+SSD R + S D T+K+ + +GKCLK L GH + F+P+ S ++ SGS D
Sbjct: 110 AFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHE 169
Query: 252 V 254
V
Sbjct: 170 V 170
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 433
I D TGKCLK L H V F+ R ++ S S D R+W+ +G+C++T D
Sbjct: 129 IIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEVRLWNAKTGECIRT--HDF 186
Query: 434 NPPVSFVKFSPNGKYILAAT 493
P++ + F G+ + A+
Sbjct: 187 YRPIASIAFHAGGELLAVAS 206
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 502 HT-QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQ 678
HT ++ D GKCLK TGH+ + + F + + SGS D+ V +WN ++ E ++
Sbjct: 125 HTVKIIDCETGKCLKILTGHRRTPWVV--RFHPRHSEIVASGSLDHEVRLWNAKTGECIR 182
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSS-DSRLIVSASDDKTLKVWELSSGKCLKT 167
KI GK K ++GH+ V + S ++ S S D +++W +G+C++T
Sbjct: 128 KIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEVRLWNAKTGECIRT 183
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +2
Query: 248 ECWIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG--QCLKTL 421
E +W+ +TG+C++ + P++++ F+ G L+ +S L IW G +
Sbjct: 169 EVRLWNAKTGECIRTHDFYR-PIASIAFHAGGELLAVASGHKL-HIWHYNKGGDDSAPAI 226
Query: 422 IDDDNPPVSFVKFSPNGKYIL 484
+ + V F P+G +L
Sbjct: 227 VLKTRRSLRAVHFHPHGVPLL 247
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 52.4 bits (120), Expect = 3e-07
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 KIWGAYD-GKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK-G 176
KIW Y+ GK +T GH + D+ +S+D ++A DK +K W+ +G+ + T G
Sbjct: 308 KIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTG 367
Query: 177 HSNYVFCCN-FNPQSNLIVSGSFDESV 254
YV N + + N++++G D+ +
Sbjct: 368 KIPYVVKLNPDDDKQNILLAGMSDKKI 394
Score = 52.0 bits (119), Expect = 4e-07
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +2
Query: 257 IWDV-RTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 433
IWDV +GKC++ H+ V + F+ DGS +++ YD + WDT +GQ + T
Sbjct: 309 IWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGK 368
Query: 434 NPPVSFVKFSPN 469
P V VK +P+
Sbjct: 369 IPYV--VKLNPD 378
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Frame = +3
Query: 39 TISGHKMGISDVAW-SSDSRLIVSASDDKTLKVWEL-SSGKCLKTLKGHSNYVFCCNFNP 212
T SGH G+S + + L++SA D +K+W++ +SGKC++T GH+ V F+
Sbjct: 277 TWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSN 336
Query: 213 QSNLIVSGSFDESVGYGM*EQGNV 284
+ ++ +D+++ Y E G V
Sbjct: 337 DGSKFLTAGYDKNIKYWDTETGQV 360
Score = 44.8 bits (101), Expect = 6e-05
Identities = 21/83 (25%), Positives = 39/83 (46%)
Frame = +2
Query: 260 WDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 439
WD+ TG+ + H V+ + F + V+SS D R+W+ +K + +
Sbjct: 397 WDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH 456
Query: 440 PVSFVKFSPNGKYILAATLDNTL 508
+ + PNG ++ A +LDN +
Sbjct: 457 SMPSISVHPNGNWLAAQSLDNQI 479
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +1
Query: 508 QLWD-YSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRL 684
++WD Y+ GKC++TY GH I FS G K++ +G + N+ Y W+ ++ +++
Sbjct: 308 KIWDVYNSGKCMRTYMGHAKAVRDIC--FSNDGSKFLTAGYDKNIKY-WDTETGQVISTF 364
Query: 685 S 687
S
Sbjct: 365 S 365
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +3
Query: 9 WGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL-KGHSN 185
W G+ + H ++ + + ++R V++SDDK+L+VWE +K + + H +
Sbjct: 397 WDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH 456
Query: 186 YVFCCNFNPQSNLIVSGSFDESV 254
+ + +P N + + S D +
Sbjct: 457 SMPSISVHPNGNWLAAQSLDNQI 479
Score = 34.7 bits (76), Expect = 0.064
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 248 ECWIWDVRTGKCLKPLPAHSDP-VSAVHFNRDGSLIVSSSYDGLCRIWD 391
+CW WD ++ K + L H+ + A + S + + +DGL + WD
Sbjct: 525 KCWFWDWKSCKVFRTLKCHNGVCIGAEWHPLEQSKVATCGWDGLIKYWD 573
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = +1
Query: 541 KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTAC 720
K + GH Y NFS G++++SG + + W+ +S ++ + L H +
Sbjct: 494 KRFAGHIVAGYACQVNFS-PDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHNGVCIGAEW 552
Query: 721 HP 726
HP
Sbjct: 553 HP 554
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Frame = +3
Query: 33 EKTISGHKMG--ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF 206
+K +GH + V +S D R ++S + W+ S K +TLK H+ +
Sbjct: 493 KKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHNGVCIGAEW 552
Query: 207 NP-QSNLIVSGSFDESVGY 260
+P + + + + +D + Y
Sbjct: 553 HPLEQSKVATCGWDGLIKY 571
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 323 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 421
V+F+ DG ++S +G C WD S + +TL
Sbjct: 508 VNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTL 540
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 52.0 bits (119), Expect = 4e-07
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
KIW K EK ++GH+ + D +S D +V+AS D T ++W + +GK + H
Sbjct: 242 KIWNLDGFKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRAGKEEMVYQAHR 301
Query: 183 NYVFCC 200
CC
Sbjct: 302 KATVCC 307
Score = 49.2 bits (112), Expect = 3e-06
Identities = 22/68 (32%), Positives = 35/68 (51%)
Frame = +3
Query: 42 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 221
+ H I S ++ + +AS DKT+K+W L K K L GH +V+ C+F+
Sbjct: 213 LQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLDGFKLEKVLTGHERWVWDCDFSMDGE 272
Query: 222 LIVSGSFD 245
+V+ S D
Sbjct: 273 YLVTASSD 280
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/78 (25%), Positives = 40/78 (51%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
IWD+R +C + + S PV+ V + + + ++S +G R+WD + C L+ +
Sbjct: 110 IWDLRVRECQREFRSVS-PVNTVVLHPNQTELISGDQNGNIRVWDLRADLCSCELVPEVG 168
Query: 437 PPVSFVKFSPNGKYILAA 490
P+ + +G ++AA
Sbjct: 169 TPIRSLTVMWDGTMVVAA 186
Score = 35.9 bits (79), Expect = 0.028
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 7/91 (7%)
Frame = +2
Query: 257 IWDVRTGKCLKPL-PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT----- 418
+WD+R C L P P+ ++ DG+++V+++ G C +W + + T
Sbjct: 151 VWDLRADLCSCELVPEVGTPIRSLTVMWDGTMVVAANDRGTCYVWRSLCERQTMTEFEPL 210
Query: 419 -LIDDDNPPVSFVKFSPNGKYILAATLDNTL 508
+ N + SP KY+ A+ D T+
Sbjct: 211 HKLQAHNSHILKCLLSPGNKYLATASSDKTV 241
Score = 32.3 bits (70), Expect = 0.34
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 406
IW++ K K L H V F+ DG +V++S D R+W +G+
Sbjct: 243 IWNLDGFKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRAGK 292
Score = 31.1 bits (67), Expect = 0.78
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 601 GGKWIVSGSEDNLVYIWNLQSKEIVQRLSGH 693
G K++ + S D V IWNL ++ + L+GH
Sbjct: 228 GNKYLATASSDKTVKIWNLDGFKLEKVLTGH 258
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/62 (22%), Positives = 29/62 (46%)
Frame = +3
Query: 51 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 230
H + V + ++ S S+D ++K+W+L +C + + S V +P ++
Sbjct: 83 HTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQREFRSVSP-VNTVVLHPNQTELI 141
Query: 231 SG 236
SG
Sbjct: 142 SG 143
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/45 (22%), Positives = 25/45 (55%)
Frame = +3
Query: 99 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 233
+ +AS D+T+++W+ +G+C + + +V P+ +V+
Sbjct: 13 LATASHDQTIRLWQARTGRCYFSFRYPDLHVNRLELTPEKGKLVA 57
Score = 28.3 bits (60), Expect = 5.5
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = +1
Query: 502 HTQLWD---YSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEI 672
H +L+D Y+ ++ + H K + F TG + SGSED V IW+L+ +E
Sbjct: 62 HIRLFDLRSYNPHIPVRNFVSHT--KNVMAVGFQYTG-HMMYSGSEDGSVKIWDLRVRE- 117
Query: 673 VQRLSGHTDTVLCTACHP 726
QR V HP
Sbjct: 118 CQREFRSVSPVNTVVLHP 135
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 51.6 bits (118), Expect = 5e-07
Identities = 22/70 (31%), Positives = 37/70 (52%)
Frame = +3
Query: 45 SGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNL 224
+GH + V W L+VS D+ +K+W+ SG+ L +L GH N V +N N
Sbjct: 265 AGHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNW 324
Query: 225 IVSGSFDESV 254
+++ S D+ +
Sbjct: 325 LLTASKDQII 334
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/85 (28%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
K+W G+ ++ GHK + V W+ + +++AS D+ +K++++ + K L++ +GH+
Sbjct: 293 KLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHT 352
Query: 183 NYVFCCNFNP-QSNLIVSGSFDESV 254
V ++P VSGS D S+
Sbjct: 353 KDVTSLAWHPCHEEYFVSGSSDGSI 377
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/84 (28%), Positives = 44/84 (52%)
Frame = +1
Query: 475 IYIGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 654
+ + G Q +LWD G+ L + GHKN + N G W+++ S+D ++ +++
Sbjct: 282 LLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWN---QNGNWLLTASKDQIIKLYD 338
Query: 655 LQSKEIVQRLSGHTDTVLCTACHP 726
+++ + +Q GHT V A HP
Sbjct: 339 IRTMKELQSFRGHTKDVTSLAWHP 362
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/93 (21%), Positives = 50/93 (53%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+WD R+G+ L L H + V +V +N++G+ ++++S D + +++D + + L++
Sbjct: 294 LWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTK 353
Query: 437 PPVSFVKFSPNGKYILAATLDNTLNYGTIAEEN 535
S + +Y ++ + D ++ + + EN
Sbjct: 354 DVTSLAWHPCHEEYFVSGSSDGSICHWIVGHEN 386
Score = 36.7 bits (81), Expect = 0.016
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWE 140
+W FE + H I + WS + +VS D TLK W+
Sbjct: 149 LWNGQSFNFEMILQAHDQPIRSMVWSHNENYMVSGDDGGTLKYWQ 193
Score = 31.9 bits (69), Expect = 0.45
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCL 161
K W + + HK I D+++ S SDD T+KVW+ + KC+
Sbjct: 190 KYWQNNMNNVKANKTAHKESIRDLSFCKTDLKFCSCSDDTTVKVWDFT--KCV 240
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/91 (19%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Frame = +3
Query: 15 AYDGKF-EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYV 191
++ KF +++ ++ I+ V W+ R +++ S +W S L+ H +
Sbjct: 109 SFAAKFVHASLNKNRCSINRVLWTPSGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPI 168
Query: 192 FCCNFNPQSNLIVSGSFDESVGYGM*EQGNV 284
++ N +VSG ++ Y NV
Sbjct: 169 RSMVWSHNENYMVSGDDGGTLKYWQNNMNNV 199
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +3
Query: 45 SGHKMGISDVAWSSDSRLIVSASDDKTLKVW 137
+ H + D+AW L+ S S+D T K W
Sbjct: 393 NAHDNSVWDLAWHPIGYLLCSGSNDHTTKFW 423
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 51.6 bits (118), Expect = 5e-07
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL-SSGKCLKTLKGHS 182
+W K + T+ H I+D+ +S + ++S DKT++VW+ + G L+T GHS
Sbjct: 677 LWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRVWDADNKGYSLRTFMGHS 736
Query: 183 NYVFCCNFNP-QSNLIVSGSFDESVGYGM*EQGNV*NHYR--RIQIQFQ 320
+ V +F+P + +LI S D + Y G+ Y+ QI+FQ
Sbjct: 737 SMVTSLDFHPIKDDLICSCDNDNEIRYWSINNGSCTRVYKGGSTQIRFQ 785
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Frame = +3
Query: 39 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL---SSGKCLKTLKGHSNYVFCCNFN 209
++ GH I+ V W + S S+D +KVW L S G+C+ L + N C F+
Sbjct: 813 SLQGHANPINSVCWDPSGDFLASVSED-MVKVWTLGTGSEGECVHELSCNGNKFQSCVFH 871
Query: 210 P-QSNLIVSGSF 242
P +L+V G +
Sbjct: 872 PAYPSLLVIGCY 883
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = +3
Query: 78 WSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 254
+SSD +++ SA DK +W + K TL+ H+ + F+P + + SFD++V
Sbjct: 659 FSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTV 717
Score = 37.9 bits (84), Expect = 0.007
Identities = 17/70 (24%), Positives = 39/70 (55%)
Frame = +2
Query: 299 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 478
A + V+ HF+ DG ++ S+ +D +W T + + KT +++ ++ ++FSP+
Sbjct: 649 ASTTKVTCCHFSSDGKMLASAGHDKKAVLWYTDTMK-PKTTLEEHTAMITDIRFSPSQLR 707
Query: 479 ILAATLDNTL 508
+ ++ D T+
Sbjct: 708 LATSSFDKTV 717
Score = 33.9 bits (74), Expect = 0.11
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQCLKTLIDDD 433
+W T K L H+ ++ + F+ + +SS+D R+WD + G L+T +
Sbjct: 677 LWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRVWDADNKGYSLRTFMGHS 736
Query: 434 NPPVSFVKFSP-NGKYILAATLDNTLNYGTI 523
+ V+ + F P I + DN + Y +I
Sbjct: 737 S-MVTSLDFHPIKDDLICSCDNDNEIRYWSI 766
Score = 31.9 bits (69), Expect = 0.45
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWE 140
++W + K T+ H+ I+ +A S+ + L+ SAS DK +K+W+
Sbjct: 887 ELWNMSENK-TMTLPAHEGLITSLAVSTATGLVASASHDKLVKLWK 931
Score = 31.5 bits (68), Expect = 0.59
Identities = 28/120 (23%), Positives = 48/120 (40%)
Frame = +1
Query: 370 WFMSNLGYSFRTMS*NSNRR*QPSCFVC*ILTEWKIYIGGDVRQHTQLWDYSRGKCLKTY 549
W N GYS RT +S+ S I + + D + W + G C + Y
Sbjct: 720 WDADNKGYSLRTFMGHSSM--VTSLDFHPIKDD--LICSCDNDNEIRYWSINNGSCTRVY 775
Query: 550 TGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTACHPT 729
G + F GK++ + S NLV + +++++ I L GH + + P+
Sbjct: 776 KGGSTQ-----IRFQPRVGKYLAASSA-NLVNVLDVETQAIRHSLQGHANPINSVCWDPS 829
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/44 (27%), Positives = 26/44 (59%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 388
+W++ K + LPAH ++++ + L+ S+S+D L ++W
Sbjct: 888 LWNMSENKTMT-LPAHEGLITSLAVSTATGLVASASHDKLVKLW 930
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 51.6 bits (118), Expect = 5e-07
Identities = 24/70 (34%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Frame = +3
Query: 51 HKMGISDVAWSSDSR-LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NL 224
H + +AW+ + R ++ SAS DK +KVW++++G C T++ H+ V +N + +
Sbjct: 232 HTRSVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEV 291
Query: 225 IVSGSFDESV 254
++SGSFD++V
Sbjct: 292 LLSGSFDQTV 301
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/68 (27%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Frame = +3
Query: 39 TISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGK--CLKTLKGHSNYVFCCNFN 209
TI+GH + V+++ S L+ + S D+T+K+W+LS+ + C+ T ++ +F F+
Sbjct: 364 TINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPSCIATHNPNAGGLFFIAFS 423
Query: 210 PQSNLIVS 233
P + +++
Sbjct: 424 PDNPFLLA 431
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDG-SLIVSSSYD 370
+WDV TG C + H+ V AV +N +++S S+D
Sbjct: 260 VWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFD 298
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/72 (23%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 299 AHSDPVSAVHFNRD-GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG- 472
+H+ V + +N++ +++ S+S D ++WD A+G C K ++ V V ++
Sbjct: 231 SHTRSVLGLAWNKEFRNILASASADKKVKVWDVATGTC-KITMEHHTKEVQAVAWNHYAP 289
Query: 473 KYILAATLDNTL 508
+ +L+ + D T+
Sbjct: 290 EVLLSGSFDQTV 301
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 51.6 bits (118), Expect = 5e-07
Identities = 21/70 (30%), Positives = 43/70 (61%)
Frame = +3
Query: 42 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 221
+ GH+ ++ + ++ + L+ S + D T VW +G+ L T +GHS V+CC+ + S+
Sbjct: 33 MKGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDSS 92
Query: 222 LIVSGSFDES 251
+++GS D++
Sbjct: 93 RLITGSADQT 102
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK 173
+W A +G+ T GH + S DS +++ S D+T K+W++ SGK L T K
Sbjct: 63 VWFADNGERLGTYRGHSGAVWCCDISRDSSRLITGSADQTAKLWDVKSGKELFTFK 118
Score = 37.5 bits (83), Expect = 0.009
Identities = 37/136 (27%), Positives = 56/136 (41%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+W G+ L HS V +RD S +++ S D ++WD SG+ L T
Sbjct: 63 VWFADNGERLGTYRGHSGAVWCCDISRDSSRLITGSADQTAKLWDVKSGKELFTF--KFG 120
Query: 437 PPVSFVKFSPNGKYILAATLDNTLNYGTIAEENV*RHIRDTRTKNIVSLPTLVSLAGSG* 616
P V FS G ++ T D+ + GT + +V R D + V LV + G
Sbjct: 121 APARSVDFSV-GDHLAVITTDHFV--GTSSAIHVKRIAEDPEDQ--VGDSVLVLQSPDGK 175
Query: 617 YRDQKTTWCTYGTFNQ 664
+ + W G NQ
Sbjct: 176 KKINRAVW---GPLNQ 188
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +3
Query: 3 KIWGAYDGKFEKTIS---GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKT 167
+IW A GK K GHK I+ + ++D ++ S DKT K+W++ + +KT
Sbjct: 200 RIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWDMRTLTLIKT 257
Score = 35.5 bits (78), Expect = 0.036
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +2
Query: 257 IWDVRTGKCLKPLP---AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 427
IWD TGK LK H + ++++ D S ++ S+D ++WD + +KT
Sbjct: 201 IWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWDMRTLTLIKTY-- 258
Query: 428 DDNPPVSFVKFSP 466
PV+ V SP
Sbjct: 259 TTVVPVNAVAMSP 271
Score = 32.3 bits (70), Expect = 0.34
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 54 KMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLK 164
K I+ W ++ IVS +D +++W+ +GK LK
Sbjct: 175 KKKINRAVWGPLNQTIVSGGEDAAIRIWDAETGKLLK 211
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +2
Query: 293 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 418
+ H P++ + +NR+G L+ S + D +W +G+ L T
Sbjct: 33 MKGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGT 74
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 51.2 bits (117), Expect = 7e-07
Identities = 24/70 (34%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Frame = +3
Query: 51 HKMGISDVAWSSDSR-LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NL 224
H + +AW+ + R ++ SAS DK +KVW++++G C T++ H+ V +N + +
Sbjct: 264 HTESVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEV 323
Query: 225 IVSGSFDESV 254
++SGSFD++V
Sbjct: 324 LLSGSFDQTV 333
Score = 35.1 bits (77), Expect = 0.048
Identities = 19/61 (31%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Frame = +3
Query: 39 TISGHKM--GISDVAWS-SDSRLIVSASDDKTLKVWELSSGK--CLKTLKGHSNYVFCCN 203
TI H G+S ++++ S L+ + S DK++K+W+LS+ + C+ T + ++ VF +
Sbjct: 397 TIQAHAQDRGVSSISYNISTPNLLATGSMDKSVKLWDLSNNEPSCIATHQPNAGAVFSIS 456
Query: 204 F 206
F
Sbjct: 457 F 457
Score = 31.1 bits (67), Expect = 0.78
Identities = 17/72 (23%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +2
Query: 299 AHSDPVSAVHFNRD-GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG- 472
+H++ V + +N++ +++ S+S D ++WD A+G C K ++ V V ++
Sbjct: 263 SHTESVLGLAWNKEFRNILASASADKKVKVWDVATGTC-KITMEHHTKEVQAVAWNHYAP 321
Query: 473 KYILAATLDNTL 508
+ +L+ + D T+
Sbjct: 322 EVLLSGSFDQTV 333
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDG-SLIVSSSYD 370
+WDV TG C + H+ V AV +N +++S S+D
Sbjct: 292 VWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFD 330
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 50.8 bits (116), Expect = 9e-07
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Frame = +3
Query: 48 GHKMGISDVAWSSDSRLIVSASDDKTLKVWEL-SSGKCLKTLKGHSNYVFCCNFNP-QSN 221
GH I D++WS + ++S+S D+T+++W + SS +C++ H ++V C FNP N
Sbjct: 361 GHTGEILDLSWS-EKGFLLSSSVDETVRLWRVGSSDECIRVF-SHKSFVTCVAFNPVDDN 418
Query: 222 LIVSGSFDESV 254
+SGS D V
Sbjct: 419 YFISGSIDGKV 429
Score = 31.9 bits (69), Expect = 0.45
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = +2
Query: 257 IWDVRTG-KCLKPLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 430
+W V + +C++ +H V+ V FN D + +S S DG RIWD + + + D
Sbjct: 388 LWRVGSSDECIRVF-SHKSFVTCVAFNPVDDNYFISGSIDGKVRIWDVSQFRVVD--YTD 444
Query: 431 DNPPVSFVKFSPNGK 475
V+ + + P+GK
Sbjct: 445 IRQIVTALCYRPDGK 459
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +1
Query: 481 IGGDVRQHTQLWDY-SRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 657
+ V + +LW S +C++ ++ HK+ C+ F+ + +SGS D V IW++
Sbjct: 378 LSSSVDETVRLWRVGSSDECIRVFS-HKSFVTCVA--FNPVDDNYFISGSIDGKVRIWDV 434
Query: 658 QSKEIV 675
+V
Sbjct: 435 SQFRVV 440
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 610 WIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTACHP 726
+++S S D V +W + S + R+ H V C A +P
Sbjct: 376 FLLSSSVDETVRLWRVGSSDECIRVFSHKSFVTCVAFNP 414
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/59 (23%), Positives = 24/59 (40%)
Frame = +2
Query: 299 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 475
AH + + F+ DG + S+ D + R+W+ + + S V F N K
Sbjct: 255 AHDGSIVVMKFSHDGKYLASAGEDCVVRVWNIIEDERRDNEFEVAESDSSCVYFGMNDK 313
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = +3
Query: 39 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWE-LSSGKCLKTLKGHSNYVFCCNFNPQ 215
T H ++D A + +S L VS S D T+K W+ LS G C +TL+ HS+YV C +
Sbjct: 79 TFESHVDWVNDAALAGESTL-VSCSSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAK 137
Query: 216 SNLIVS 233
+N +V+
Sbjct: 138 NNNVVA 143
Score = 48.0 bits (109), Expect = 6e-06
Identities = 21/82 (25%), Positives = 38/82 (46%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
++W G + GH + + S R +S S D +++W+L +CL T H+
Sbjct: 238 RVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHT 297
Query: 183 NYVFCCNFNPQSNLIVSGSFDE 248
+ V+ NP + + SG D+
Sbjct: 298 DSVWALACNPSFSHVYSGGRDQ 319
Score = 44.4 bits (100), Expect = 8e-05
Identities = 20/83 (24%), Positives = 42/83 (50%)
Frame = +1
Query: 481 IGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ 660
+ G + ++WD G GH + + + + G++ +SGS D+++ +W+L
Sbjct: 229 VSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDST---GRFCLSGSSDSMIRLWDLG 285
Query: 661 SKEIVQRLSGHTDTVLCTACHPT 729
+ + + HTD+V AC+P+
Sbjct: 286 QQRCLHTYAVHTDSVWALACNPS 308
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 418
+WD RTG L H+D V + + G +S S D + R+WD +CL T
Sbjct: 239 VWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHT 292
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = +3
Query: 48 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 227
GHK + +A + ++VS +K L+VW+ +G L+GH++ V +
Sbjct: 211 GHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFC 270
Query: 228 VSGSFDESV 254
+SGS D +
Sbjct: 271 LSGSSDSMI 279
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 553 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 705
GHK Y + N + G +VSG + ++ +W+ ++ +L GHTD V
Sbjct: 211 GHKESVYALAMNDT---GTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNV 258
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/84 (25%), Positives = 36/84 (42%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+WD+ +CL H+D V A+ N S + S D + D A+ + L+
Sbjct: 281 LWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYLTDLATRE--SVLLCTKE 338
Query: 437 PPVSFVKFSPNGKYILAATLDNTL 508
P+ + N I AT D+++
Sbjct: 339 HPIQQLALQDNS--IWVATTDSSV 360
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = +3
Query: 39 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWE-LSSGKCLKTLKGHSNYVFCCNFNPQ 215
T H ++D A + +S L VS S D T+K W+ LS G C +TL+ HS+YV C +
Sbjct: 79 TFESHVDWVNDAALAGESTL-VSCSSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAK 137
Query: 216 SNLIVS 233
+N +V+
Sbjct: 138 NNNVVA 143
Score = 48.0 bits (109), Expect = 6e-06
Identities = 21/82 (25%), Positives = 38/82 (46%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
++W G + GH + + S R +S S D +++W+L +CL T H+
Sbjct: 238 RVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHT 297
Query: 183 NYVFCCNFNPQSNLIVSGSFDE 248
+ V+ NP + + SG D+
Sbjct: 298 DSVWALACNPSFSHVYSGGRDQ 319
Score = 44.4 bits (100), Expect = 8e-05
Identities = 20/83 (24%), Positives = 42/83 (50%)
Frame = +1
Query: 481 IGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ 660
+ G + ++WD G GH + + + + G++ +SGS D+++ +W+L
Sbjct: 229 VSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDST---GRFCLSGSSDSMIRLWDLG 285
Query: 661 SKEIVQRLSGHTDTVLCTACHPT 729
+ + + HTD+V AC+P+
Sbjct: 286 QQRCLHTYAVHTDSVWALACNPS 308
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 418
+WD RTG L H+D V + + G +S S D + R+WD +CL T
Sbjct: 239 VWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHT 292
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = +3
Query: 48 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 227
GHK + +A + ++VS +K L+VW+ +G L+GH++ V +
Sbjct: 211 GHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFC 270
Query: 228 VSGSFDESV 254
+SGS D +
Sbjct: 271 LSGSSDSMI 279
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 553 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 705
GHK Y + N + G +VSG + ++ +W+ ++ +L GHTD V
Sbjct: 211 GHKESVYALAMNDT---GTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNV 258
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/84 (25%), Positives = 36/84 (42%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+WD+ +CL H+D V A+ N S + S D + D A+ + L+
Sbjct: 281 LWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYLTDLATRE--SVLLCTKE 338
Query: 437 PPVSFVKFSPNGKYILAATLDNTL 508
P+ + N I AT D+++
Sbjct: 339 HPIQQLALQDNS--IWVATTDSSV 360
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/71 (33%), Positives = 39/71 (54%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
K+W + GH+ I+D+A SS++ I SAS+D ++VW L G + L+GH+
Sbjct: 270 KVWSMDTAYCLASCRGHEGDITDLAVSSNNIFIASASNDCVIRVWRLPDGLPVSVLRGHT 329
Query: 183 NYVFCCNFNPQ 215
V F+P+
Sbjct: 330 GAVTAIAFSPR 340
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/70 (25%), Positives = 33/70 (47%)
Frame = +3
Query: 36 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 215
K + GH+ + R +++ SDD+ +KVW + + CL + +GH + +
Sbjct: 239 KRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSN 298
Query: 216 SNLIVSGSFD 245
+ I S S D
Sbjct: 299 NIFIASASND 308
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Frame = +3
Query: 60 GISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGH--SNYVFCCN-FNPQSNLIV 230
G++ +AWS D+R +++A D + VW S G + +L GH S YV + FNP+ + +
Sbjct: 546 GVNMIAWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTASTYVMDVHPFNPR--IAM 603
Query: 231 SGSFD 245
S +D
Sbjct: 604 SAGYD 608
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = +1
Query: 538 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGH 693
+K GH+N YC + S G+++++GS+D LV +W++ + + GH
Sbjct: 238 IKRLRGHRNAVYCAILDRS---GRYVITGSDDRLVKVWSMDTAYCLASCRGH 286
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFN-RDGS--LIVSSSYDGLCRIWDTASGQ 406
+W + G + L H+ V+A+ F+ R GS ++SSS DG CRIWD Q
Sbjct: 313 VWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIWDARGAQ 365
Score = 34.7 bits (76), Expect = 0.064
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = +1
Query: 475 IYIGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGK-WIVSGSEDNLVYIW 651
+ G D R ++W CL + GH+ + + +V+ +I S S D ++ +W
Sbjct: 260 VITGSDDRL-VKVWSMDTAYCLASCRGHEGD----ITDLAVSSNNIFIASASNDCVIRVW 314
Query: 652 NLQSKEIVQRLSGHTDTVLCTACHP 726
L V L GHT V A P
Sbjct: 315 RLPDGLPVSVLRGHTGAVTAIAFSP 339
Score = 32.3 bits (70), Expect = 0.34
Identities = 23/103 (22%), Positives = 43/103 (41%), Gaps = 22/103 (21%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWS---SDSRLIVSASDDKTLKVWELSSGKCLKTL- 170
++W DG + GH ++ +A+S ++S+SDD T ++W+ + +
Sbjct: 312 RVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIWDARGAQFAPRIY 371
Query: 171 ------------------KGHSNYVFCCNFNPQSNLIVSGSFD 245
S+ +FCC FN ++ V+GS D
Sbjct: 372 VPRPPSPDGKNSGPSSSNAQQSHQIFCCAFNASGSVFVTGSSD 414
Score = 31.9 bits (69), Expect = 0.45
Identities = 17/72 (23%), Positives = 34/72 (47%)
Frame = +2
Query: 284 LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 463
+K L H + V +R G +++ S D L ++W + CL + + ++ + S
Sbjct: 238 IKRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEG-DITDLAVS 296
Query: 464 PNGKYILAATLD 499
N +I +A+ D
Sbjct: 297 SNNIFIASASND 308
Score = 31.5 bits (68), Expect = 0.59
Identities = 16/70 (22%), Positives = 32/70 (45%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+W + T CL H ++ + + + I S+S D + R+W G + +++
Sbjct: 271 VWSMDTAYCLASCRGHEGDITDLAVSSNNIFIASASNDCVIRVWRLPDGLPV-SVLRGHT 329
Query: 437 PPVSFVKFSP 466
V+ + FSP
Sbjct: 330 GAVTAIAFSP 339
Score = 31.1 bits (67), Expect = 0.78
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAH--SDPVSAVH-FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 427
+W+ G + L H S V VH FN + +S+ YDG +WD G ++ + D
Sbjct: 570 VWNASDGSLVHSLTGHTASTYVMDVHPFNP--RIAMSAGYDGKTIVWDIWEGIPIQ-IYD 626
Query: 428 DDNPPVSFVKFSPNGKYIL 484
+ + KFSP+G I+
Sbjct: 627 ISHYKLVDGKFSPDGTSII 645
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 159 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 254
+K L+GH N V+C + +++GS D V
Sbjct: 238 IKRLRGHRNAVYCAILDRSGRYVITGSDDRLV 269
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/40 (25%), Positives = 20/40 (50%)
Frame = +1
Query: 607 KWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTACHP 726
+++++ D + +WN +V L+GHT + HP
Sbjct: 557 RFVLAAIMDCRICVWNASDGSLVHSLTGHTASTYVMDVHP 596
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/60 (36%), Positives = 31/60 (51%)
Frame = +2
Query: 254 WIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 433
+ WDV +GK HSD + V S I++ S DG RIWD +G+C+K + D
Sbjct: 184 YCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVKVIGSQD 243
Score = 44.4 bits (100), Expect = 8e-05
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +3
Query: 9 WGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL 170
W GK + T GH + V S + I++ S+D T ++W+ +GKC+K +
Sbjct: 186 WDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVKVI 239
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGK-WIVSGSEDNLVYIWNLQSKEIVQRL 684
++WD GKC+K + ++ ++ G + W+V G NL +WNL + E VQ +
Sbjct: 226 RIWDCKTGKCVKVIGSQDKKSRLRVSSMALDGSESWLVCGQGKNLA-LWNLPASECVQTI 284
Score = 36.7 bits (81), Expect = 0.016
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +3
Query: 63 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 242
I+ ++ S + +A+ D W++ SGK T KGHS+Y+ ++ I++GS
Sbjct: 162 INAMSVDPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSE 221
Query: 243 D 245
D
Sbjct: 222 D 222
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +1
Query: 514 WDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQ 678
WD GK T+ GH + + + + S + I++GSED IW+ ++ + V+
Sbjct: 186 WDVESGKIKMTFKGHSDYLHTVVSRSSAS---QILTGSEDGTARIWDCKTGKCVK 237
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 49.2 bits (112), Expect = 3e-06
Identities = 19/70 (27%), Positives = 43/70 (61%)
Frame = +3
Query: 42 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 221
+ GH+ ++ + ++ + L+ S + D T +W +G+ L T +GH+ V+CC+ + S+
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSS 65
Query: 222 LIVSGSFDES 251
+++GS D++
Sbjct: 66 RLITGSADQT 75
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK 173
+W A +G+ T GH + S DS +++ S D+T K+W++ SGK L T K
Sbjct: 36 LWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFK 91
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +3
Query: 3 KIWGAYDGKFEKTIS---GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKT 167
+IW A GK K GHK I+ + ++D ++ S DKT K+W++ + LKT
Sbjct: 173 RIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKT 230
Score = 35.1 bits (77), Expect = 0.048
Identities = 21/79 (26%), Positives = 34/79 (43%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+W G+ L H+ V +RD S +++ S D ++WD SG+ L T N
Sbjct: 36 LWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTF--KFN 93
Query: 437 PPVSFVKFSPNGKYILAAT 493
P V F+ + + T
Sbjct: 94 APTRSVDFAVGDRLAVITT 112
Score = 34.7 bits (76), Expect = 0.064
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 54 KMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLK 164
K I+ W ++ IVS +DK +++W+ +GK LK
Sbjct: 148 KKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLK 184
Score = 34.3 bits (75), Expect = 0.084
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +2
Query: 257 IWDVRTGKCLKPLP---AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 427
IWD TGK LK H ++++ D S ++ S D ++WD + LKT
Sbjct: 174 IWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTY-- 231
Query: 428 DDNPPVSFVKFSP 466
PV+ V SP
Sbjct: 232 TTVVPVNAVSLSP 244
Score = 31.9 bits (69), Expect = 0.45
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +1
Query: 496 RQHTQ-LWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQS-KE 669
+ HT LW G+ L TY GH +C + S + +++GS D +W+++S KE
Sbjct: 30 KDHTPTLWFADNGERLGTYRGHNGAVWC--CDVSRDSSR-LITGSADQTAKLWDVKSGKE 86
Query: 670 I 672
+
Sbjct: 87 L 87
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +2
Query: 293 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 418
+ H P++ + +NR+G L+ S + D +W +G+ L T
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGT 47
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 49.2 bits (112), Expect = 3e-06
Identities = 19/70 (27%), Positives = 43/70 (61%)
Frame = +3
Query: 42 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 221
+ GH+ ++ + ++ + L+ S + D T +W +G+ L T +GH+ V+CC+ + S+
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSS 65
Query: 222 LIVSGSFDES 251
+++GS D++
Sbjct: 66 RLITGSADQT 75
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK 173
+W A +G+ T GH + S DS +++ S D+T K+W++ SGK L T K
Sbjct: 36 LWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFK 91
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +3
Query: 3 KIWGAYDGKFEKTIS---GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKT 167
+IW A GK K GHK I+ + ++D ++ S DKT K+W++ + LKT
Sbjct: 173 RIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKT 230
Score = 35.1 bits (77), Expect = 0.048
Identities = 21/79 (26%), Positives = 34/79 (43%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+W G+ L H+ V +RD S +++ S D ++WD SG+ L T N
Sbjct: 36 LWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTF--KFN 93
Query: 437 PPVSFVKFSPNGKYILAAT 493
P V F+ + + T
Sbjct: 94 APTRSVDFAVGDRLAVITT 112
Score = 34.7 bits (76), Expect = 0.064
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 54 KMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLK 164
K I+ W ++ IVS +DK +++W+ +GK LK
Sbjct: 148 KKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLK 184
Score = 34.3 bits (75), Expect = 0.084
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +2
Query: 257 IWDVRTGKCLKPLP---AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 427
IWD TGK LK H ++++ D S ++ S D ++WD + LKT
Sbjct: 174 IWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTY-- 231
Query: 428 DDNPPVSFVKFSP 466
PV+ V SP
Sbjct: 232 TTVVPVNAVSLSP 244
Score = 31.9 bits (69), Expect = 0.45
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +1
Query: 496 RQHTQ-LWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQS-KE 669
+ HT LW G+ L TY GH +C + S + +++GS D +W+++S KE
Sbjct: 30 KDHTPTLWFADNGERLGTYRGHNGAVWC--CDVSRDSSR-LITGSADQTAKLWDVKSGKE 86
Query: 670 I 672
+
Sbjct: 87 L 87
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +2
Query: 293 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 418
+ H P++ + +NR+G L+ S + D +W +G+ L T
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGT 47
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 49.2 bits (112), Expect = 3e-06
Identities = 19/70 (27%), Positives = 43/70 (61%)
Frame = +3
Query: 42 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 221
+ GH+ ++ + ++ + L+ S + D T +W +G+ L T +GH+ V+CC+ + S+
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSS 65
Query: 222 LIVSGSFDES 251
+++GS D++
Sbjct: 66 RLITGSADQT 75
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK 173
+W A +G+ T GH + S DS +++ S D+T K+W++ SGK L T K
Sbjct: 36 LWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFK 91
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +3
Query: 3 KIWGAYDGKFEKTIS---GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKT 167
+IW A GK K GHK I+ + ++D ++ S DKT K+W++ + LKT
Sbjct: 173 RIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKT 230
Score = 35.1 bits (77), Expect = 0.048
Identities = 21/79 (26%), Positives = 34/79 (43%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+W G+ L H+ V +RD S +++ S D ++WD SG+ L T N
Sbjct: 36 LWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTF--KFN 93
Query: 437 PPVSFVKFSPNGKYILAAT 493
P V F+ + + T
Sbjct: 94 APTRSVDFAVGDRLAVITT 112
Score = 34.7 bits (76), Expect = 0.064
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 54 KMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLK 164
K I+ W ++ IVS +DK +++W+ +GK LK
Sbjct: 148 KKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLK 184
Score = 34.3 bits (75), Expect = 0.084
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +2
Query: 257 IWDVRTGKCLKPLP---AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 427
IWD TGK LK H ++++ D S ++ S D ++WD + LKT
Sbjct: 174 IWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTY-- 231
Query: 428 DDNPPVSFVKFSP 466
PV+ V SP
Sbjct: 232 TTVVPVNAVSLSP 244
Score = 31.9 bits (69), Expect = 0.45
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +1
Query: 496 RQHTQ-LWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQS-KE 669
+ HT LW G+ L TY GH +C + S + +++GS D +W+++S KE
Sbjct: 30 KDHTPTLWFADNGERLGTYRGHNGAVWC--CDVSRDSSR-LITGSADQTAKLWDVKSGKE 86
Query: 670 I 672
+
Sbjct: 87 L 87
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +2
Query: 293 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 418
+ H P++ + +NR+G L+ S + D +W +G+ L T
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGT 47
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 48.8 bits (111), Expect = 4e-06
Identities = 21/75 (28%), Positives = 40/75 (53%)
Frame = +3
Query: 27 KFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF 206
K K++S H+ + D+ WS D ++S S D + +W+++ G + L H +YV +
Sbjct: 44 KVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAW 103
Query: 207 NPQSNLIVSGSFDES 251
+P + + S S D +
Sbjct: 104 DPLAKYVASLSSDRT 118
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVW 137
IW G + + H + VAW ++ + S S D+T +++
Sbjct: 79 IWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIY 122
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +1
Query: 610 WIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTACHP 726
+++SGS DN IW++ + Q L H V A P
Sbjct: 67 YLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDP 105
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 48.8 bits (111), Expect = 4e-06
Identities = 21/75 (28%), Positives = 40/75 (53%)
Frame = +3
Query: 27 KFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF 206
K K++S H+ + D+ WS D ++S S D + +W+++ G + L H +YV +
Sbjct: 103 KVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAW 162
Query: 207 NPQSNLIVSGSFDES 251
+P + + S S D +
Sbjct: 163 DPLAKYVASLSSDRT 177
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVW 137
IW G + + H + VAW ++ + S S D+T +++
Sbjct: 138 IWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIY 181
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +1
Query: 610 WIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTACHP 726
+++SGS DN IW++ + Q L H V A P
Sbjct: 126 YLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDP 164
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 48.8 bits (111), Expect = 4e-06
Identities = 21/75 (28%), Positives = 40/75 (53%)
Frame = +3
Query: 27 KFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF 206
K K++S H+ + D+ WS D ++S S D + +W+++ G + L H +YV +
Sbjct: 103 KVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAW 162
Query: 207 NPQSNLIVSGSFDES 251
+P + + S S D +
Sbjct: 163 DPLAKYVASLSSDRT 177
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVW 137
IW G + + H + VAW ++ + S S D+T +++
Sbjct: 138 IWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIY 181
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +1
Query: 610 WIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTACHP 726
+++SGS DN IW++ + Q L H V A P
Sbjct: 126 YLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDP 164
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 48.8 bits (111), Expect = 4e-06
Identities = 26/93 (27%), Positives = 44/93 (47%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSN 185
IW GK + GH I + D+ +++ SDD T +VW +S G C L H+
Sbjct: 1006 IWDIRSGKQMHKLKGHTKWIRSIRMVEDT--LITGSDDWTARVWSVSRGSCDAVLACHAG 1063
Query: 186 YVFCCNFNPQSNLIVSGSFDESVGYGM*EQGNV 284
V ++P I++GS D + + ++G +
Sbjct: 1064 PVQSVEYSPFDKGIITGSADGLLRFWENDEGGI 1096
Score = 48.0 bits (109), Expect = 6e-06
Identities = 24/86 (27%), Positives = 43/86 (50%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
IWD+R+GK + L H+ + ++ D +++ S D R+W + G C ++
Sbjct: 1006 IWDIRSGKQMHKLKGHTKWIRSIRMVED--TLITGSDDWTARVWSVSRGSC-DAVLACHA 1062
Query: 437 PPVSFVKFSPNGKYILAATLDNTLNY 514
PV V++SP K I+ + D L +
Sbjct: 1063 GPVQSVEYSPFDKGIITGSADGLLRF 1088
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG--QCLKTL 421
+W V G C L H+ PV +V ++ I++ S DGL R W+ G +C+K +
Sbjct: 1046 VWSVSRGSCDAVLACHAGPVQSVEYSPFDKGIITGSADGLLRFWENDEGGIKCVKNI 1102
Score = 41.9 bits (94), Expect = 4e-04
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +1
Query: 478 YIGGDVRQHTQLWDYS-RGKCLK-TYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 651
+I G ++WD S RG L+ T GH I S GK IVSGS+D V +W
Sbjct: 870 FISGSTDCLVKIWDPSLRGSELRATLKGHTGTVRAI----SSDRGK-IVSGSDDLSVIVW 924
Query: 652 NLQSKEIVQRLSGHTDTVLC 711
+ Q+ ++++ L GH V C
Sbjct: 925 DKQTTQLLEELKGHDSQVSC 944
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +3
Query: 3 KIW--GAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKG 176
KIW + T+ GH + + SSD IVS SDD ++ VW+ + + L+ LKG
Sbjct: 880 KIWDPSLRGSELRATLKGHTGTVRAI--SSDRGKIVSGSDDLSVIVWDKQTTQLLEELKG 937
Query: 177 HSNYVFC 197
H + V C
Sbjct: 938 HDSQVSC 944
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 421
+WD +T + L+ L H VS V G ++++++DG ++WD + C+ T+
Sbjct: 923 VWDKQTTQLLEELKGHDSQVSCVKM-LSGERVLTAAHDGTVKMWDVRTDMCVATV 976
Score = 36.3 bits (80), Expect = 0.021
Identities = 14/63 (22%), Positives = 29/63 (46%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
K+W T+ I + + + ++ +A D +W++ SGK + LKGH+
Sbjct: 963 KMWDVRTDMCVATVGRCSSAILSLEYDDSTGILAAAGRDTVANIWDIRSGKQMHKLKGHT 1022
Query: 183 NYV 191
++
Sbjct: 1023 KWI 1025
Score = 35.9 bits (79), Expect = 0.028
Identities = 16/80 (20%), Positives = 40/80 (50%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSN 185
+W + + + GH +S V S R++ +A+ D T+K+W++ + C+ T+ S+
Sbjct: 923 VWDKQTTQLLEELKGHDSQVSCVKMLSGERVL-TAAHDGTVKMWDVRTDMCVATVGRCSS 981
Query: 186 YVFCCNFNPQSNLIVSGSFD 245
+ ++ + ++ + D
Sbjct: 982 AILSLEYDDSTGILAAAGRD 1001
Score = 35.9 bits (79), Expect = 0.028
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 421
+WDVRT C+ + S + ++ ++ ++ ++ D + IWD SG+ + L
Sbjct: 964 MWDVRTDMCVATVGRCSSAILSLEYDDSTGILAAAGRDTVANIWDIRSGKQMHKL 1018
Score = 33.5 bits (73), Expect = 0.15
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +2
Query: 257 IWD--VRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 430
IWD +R + L H+ V A+ + D IVS S D +WD + Q L+ L
Sbjct: 881 IWDPSLRGSELRATLKGHTGTVRAI--SSDRGKIVSGSDDLSVIVWDKQTTQLLEELKGH 938
Query: 431 DNPPVSFVKFSPNGKYILAATLDNTL 508
D+ VS VK +G+ +L A D T+
Sbjct: 939 DS-QVSCVKML-SGERVLTAAHDGTV 962
Score = 31.1 bits (67), Expect = 0.78
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +1
Query: 610 WIVSGSEDNLVYIW--NLQSKEIVQRLSGHTDTV 705
+ +SGS D LV IW +L+ E+ L GHT TV
Sbjct: 869 FFISGSTDCLVKIWDPSLRGSELRATLKGHTGTV 902
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 48.4 bits (110), Expect = 5e-06
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +3
Query: 75 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDES 251
A+S+D R + S D T+K+ + +G CLK L GH + F+P S ++ SGS D
Sbjct: 113 AFSTDGRTLASTHGDHTVKIIDCETGNCLKVLTGHRRTPWVVRFHPHHSEIVASGSLDLE 172
Query: 252 V 254
V
Sbjct: 173 V 173
Score = 41.1 bits (92), Expect = 7e-04
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSS-SYDGLCRIWDTASGQCLKTLIDDD 433
I D TG CLK L H V F+ S IV+S S D R+W+T + +C+++ +
Sbjct: 132 IIDCETGNCLKVLTGHRRTPWVVRFHPHHSEIVASGSLDLEVRLWNTTTSECIRSHL--F 189
Query: 434 NPPVSFVKFSPNGKYILAAT 493
P++ + F G+ + A+
Sbjct: 190 YRPIASIAFHAEGELLAVAS 209
Score = 35.1 bits (77), Expect = 0.048
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 502 HT-QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQ 678
HT ++ D G CLK TGH+ + + F + + SGS D V +WN + E ++
Sbjct: 128 HTVKIIDCETGNCLKVLTGHRRTPWVV--RFHPHHSEIVASGSLDLEVRLWNTTTSECIR 185
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 48.4 bits (110), Expect = 5e-06
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +3
Query: 12 GAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCL-KTLKGHSNY 188
G Y ++GH+ I + WS D IVS SDD++ ++WE+ S + + L GHS
Sbjct: 221 GHYSASHMLRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVR 280
Query: 189 VFCCNFNPQSNLIVSGSFD 245
V+ C + +LIV+ D
Sbjct: 281 VWDCCIS--DSLIVTAGED 297
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Frame = +3
Query: 48 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGH-SNYVFCCNFNPQSNL 224
GH + + D SDS LIV+A +D T +VW + G L+ +K H ++ C ++P S+L
Sbjct: 276 GHSVRVWDCC-ISDS-LIVTAGEDCTCRVWGVD-GTQLEVIKEHIGRGIWRCLYDPNSSL 332
Query: 225 IVSGSFDESV 254
+V+ FD ++
Sbjct: 333 LVTAGFDSAI 342
Score = 31.1 bits (67), Expect = 0.78
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 520 YSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIV-QRLSGHT 696
YS L+ TGH+ + I +S+ G K IVS S+D IW + S+E+V L GH+
Sbjct: 223 YSASHMLRL-TGHEGSIFRIV--WSLDGSK-IVSVSDDRSARIWEIDSQEVVGPVLFGHS 278
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 293 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 400
L H + + ++ DGS IVS S D RIW+ S
Sbjct: 231 LTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDS 266
Score = 27.5 bits (58), Expect = 9.6
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 IWDVRTGKCLKP-LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 433
IW++ + + + P L HS V + SLIV++ D CR+W G L+ + +
Sbjct: 261 IWEIDSQEVVGPVLFGHSVRVWDCCIS--DSLIVTAGEDCTCRVWG-VDGTQLEVIKEHI 317
Query: 434 NPPVSFVKFSPNGKYILAATLDNTL 508
+ + PN ++ A D+ +
Sbjct: 318 GRGIWRCLYDPNSSLLVTAGFDSAI 342
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 48.4 bits (110), Expect = 5e-06
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +3
Query: 12 GAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCL-KTLKGHSNY 188
G Y ++GH+ I + WS D IVS SDD++ ++WE+ S + + L GHS
Sbjct: 221 GHYSASHMLRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVR 280
Query: 189 VFCCNFNPQSNLIVSGSFD 245
V+ C + +LIV+ D
Sbjct: 281 VWDCCIS--DSLIVTAGED 297
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Frame = +3
Query: 48 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGH-SNYVFCCNFNPQSNL 224
GH + + D SDS LIV+A +D T +VW + G L+ +K H ++ C ++P S+L
Sbjct: 276 GHSVRVWDCC-ISDS-LIVTAGEDCTCRVWGVD-GTQLEVIKEHIGRGIWRCLYDPNSSL 332
Query: 225 IVSGSFDESV 254
+V+ FD ++
Sbjct: 333 LVTAGFDSAI 342
Score = 31.1 bits (67), Expect = 0.78
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 520 YSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIV-QRLSGHT 696
YS L+ TGH+ + I +S+ G K IVS S+D IW + S+E+V L GH+
Sbjct: 223 YSASHMLRL-TGHEGSIFRIV--WSLDGSK-IVSVSDDRSARIWEIDSQEVVGPVLFGHS 278
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 293 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 400
L H + + ++ DGS IVS S D RIW+ S
Sbjct: 231 LTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDS 266
Score = 27.5 bits (58), Expect = 9.6
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 IWDVRTGKCLKP-LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 433
IW++ + + + P L HS V + SLIV++ D CR+W G L+ + +
Sbjct: 261 IWEIDSQEVVGPVLFGHSVRVWDCCIS--DSLIVTAGEDCTCRVWG-VDGTQLEVIKEHI 317
Query: 434 NPPVSFVKFSPNGKYILAATLDNTL 508
+ + PN ++ A D+ +
Sbjct: 318 GRGIWRCLYDPNSSLLVTAGFDSAI 342
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 48.4 bits (110), Expect = 5e-06
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +3
Query: 48 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ-SNL 224
GH + V WS + L+ S S+D +K+W LSSG C+ L N F+P +L
Sbjct: 673 GHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDL 731
Query: 225 IVSGSF 242
+V G +
Sbjct: 732 LVIGGY 737
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSS-GKCLKTLKGHS 182
IW + E T H I+DV + +S + ++S DKT+K+W+ S G L+T+ GH+
Sbjct: 534 IWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHA 593
Query: 183 NYVFCCNFNPQ 215
V +F+P+
Sbjct: 594 APVMSIDFHPK 604
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/60 (26%), Positives = 34/60 (56%)
Frame = +3
Query: 75 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 254
++S D +L+ SA DK + +W + + + T + H++ + F P S + + SFD+++
Sbjct: 515 SFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 574
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWE 140
++W + K T++GH+ IS +A S + ++ SAS DK++K+W+
Sbjct: 741 ELWNTMENKC-MTVAGHECVISALAQSPSTGVVASASHDKSVKIWK 785
Score = 36.7 bits (81), Expect = 0.016
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +2
Query: 254 WIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQCLKTLIDD 430
+IW++ T + H+ ++ V F + + + +SS+D +IWD + G L+T I
Sbjct: 533 FIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRT-ISG 591
Query: 431 DNPPVSFVKFSPNGKYILAATLDN 502
PV + F P +L + N
Sbjct: 592 HAAPVMSIDFHPKKTELLCSCDSN 615
Score = 35.5 bits (78), Expect = 0.036
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 2/111 (1%)
Frame = +2
Query: 257 IWDVRT-GKCLKPLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 430
IWD G L+ + H+ PV ++ F+ + L+ S + R WD + C++ +
Sbjct: 576 IWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRAVKGA 634
Query: 431 DNPPVSFVKFSPNGKYILAATLDNTLNYGTIAEENV*RHIRDTRTKNIVSL 583
V+F P LAA +NT++ I N +I + N+ S+
Sbjct: 635 STQ----VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSV 681
Score = 33.9 bits (74), Expect = 0.11
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +2
Query: 257 IWDVRTG-KCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 433
I+D+ K + HS V +V ++ +G L+ S S D + ++W +SG C+ L +
Sbjct: 658 IFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDAV-KLWSLSSGDCIHELSNSG 716
Query: 434 NPPVSFVKFSPN 469
N S V F P+
Sbjct: 717 NKFHSVV-FHPS 727
Score = 31.1 bits (67), Expect = 0.78
Identities = 15/60 (25%), Positives = 33/60 (55%)
Frame = +2
Query: 329 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 508
F+ DG L+ S+ +D IW+ + Q +++ ++ ++ V+F PN + ++ D T+
Sbjct: 516 FSYDGKLLASAGHDKKVFIWNMETLQ-VESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 574
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 48.4 bits (110), Expect = 5e-06
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +3
Query: 48 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ-SNL 224
GH + V WS + L+ S S+D +K+W LSSG C+ L N F+P +L
Sbjct: 675 GHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDL 733
Query: 225 IVSGSF 242
+V G +
Sbjct: 734 LVIGGY 739
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSS-GKCLKTLKGHS 182
IW + E T H I+DV + +S + ++S DKT+K+W+ S G L+T+ GH+
Sbjct: 536 IWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHA 595
Query: 183 NYVFCCNFNPQ 215
V +F+P+
Sbjct: 596 APVMSIDFHPK 606
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/60 (26%), Positives = 34/60 (56%)
Frame = +3
Query: 75 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 254
++S D +L+ SA DK + +W + + + T + H++ + F P S + + SFD+++
Sbjct: 517 SFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 576
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWE 140
++W + K T++GH+ IS +A S + ++ SAS DK++K+W+
Sbjct: 743 ELWNTMENKC-MTVAGHECVISALAQSPSTGVVASASHDKSVKIWK 787
Score = 36.7 bits (81), Expect = 0.016
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +2
Query: 254 WIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQCLKTLIDD 430
+IW++ T + H+ ++ V F + + + +SS+D +IWD + G L+T I
Sbjct: 535 FIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRT-ISG 593
Query: 431 DNPPVSFVKFSPNGKYILAATLDN 502
PV + F P +L + N
Sbjct: 594 HAAPVMSIDFHPKKTELLCSCDSN 617
Score = 35.5 bits (78), Expect = 0.036
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 2/111 (1%)
Frame = +2
Query: 257 IWDVRT-GKCLKPLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 430
IWD G L+ + H+ PV ++ F+ + L+ S + R WD + C++ +
Sbjct: 578 IWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRAVKGA 636
Query: 431 DNPPVSFVKFSPNGKYILAATLDNTLNYGTIAEENV*RHIRDTRTKNIVSL 583
V+F P LAA +NT++ I N +I + N+ S+
Sbjct: 637 STQ----VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSV 683
Score = 33.9 bits (74), Expect = 0.11
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +2
Query: 257 IWDVRTG-KCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 433
I+D+ K + HS V +V ++ +G L+ S S D + ++W +SG C+ L +
Sbjct: 660 IFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDAV-KLWSLSSGDCIHELSNSG 718
Query: 434 NPPVSFVKFSPN 469
N S V F P+
Sbjct: 719 NKFHSVV-FHPS 729
Score = 31.1 bits (67), Expect = 0.78
Identities = 15/60 (25%), Positives = 33/60 (55%)
Frame = +2
Query: 329 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 508
F+ DG L+ S+ +D IW+ + Q +++ ++ ++ V+F PN + ++ D T+
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQ-VESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 576
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 48.4 bits (110), Expect = 5e-06
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +3
Query: 48 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ-SNL 224
GH + V WS + L+ S S+D +K+W LSSG C+ L N F+P +L
Sbjct: 675 GHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDL 733
Query: 225 IVSGSF 242
+V G +
Sbjct: 734 LVIGGY 739
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSS-GKCLKTLKGHS 182
IW + E T H I+DV + +S + ++S DKT+K+W+ S G L+T+ GH+
Sbjct: 536 IWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHA 595
Query: 183 NYVFCCNFNPQ 215
V +F+P+
Sbjct: 596 APVMSIDFHPK 606
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/60 (26%), Positives = 34/60 (56%)
Frame = +3
Query: 75 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 254
++S D +L+ SA DK + +W + + + T + H++ + F P S + + SFD+++
Sbjct: 517 SFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 576
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWE 140
++W + K T++GH+ IS +A S + ++ SAS DK++K+W+
Sbjct: 743 ELWNTMENKC-MTVAGHECVISALAQSPSTGVVASASHDKSVKIWK 787
Score = 36.7 bits (81), Expect = 0.016
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +2
Query: 254 WIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQCLKTLIDD 430
+IW++ T + H+ ++ V F + + + +SS+D +IWD + G L+T I
Sbjct: 535 FIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRT-ISG 593
Query: 431 DNPPVSFVKFSPNGKYILAATLDN 502
PV + F P +L + N
Sbjct: 594 HAAPVMSIDFHPKKTELLCSCDSN 617
Score = 35.5 bits (78), Expect = 0.036
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 2/111 (1%)
Frame = +2
Query: 257 IWDVRT-GKCLKPLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 430
IWD G L+ + H+ PV ++ F+ + L+ S + R WD + C++ +
Sbjct: 578 IWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRAVKGA 636
Query: 431 DNPPVSFVKFSPNGKYILAATLDNTLNYGTIAEENV*RHIRDTRTKNIVSL 583
V+F P LAA +NT++ I N +I + N+ S+
Sbjct: 637 STQ----VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSV 683
Score = 33.9 bits (74), Expect = 0.11
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +2
Query: 257 IWDVRTG-KCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 433
I+D+ K + HS V +V ++ +G L+ S S D + ++W +SG C+ L +
Sbjct: 660 IFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDAV-KLWSLSSGDCIHELSNSG 718
Query: 434 NPPVSFVKFSPN 469
N S V F P+
Sbjct: 719 NKFHSVV-FHPS 729
Score = 31.1 bits (67), Expect = 0.78
Identities = 15/60 (25%), Positives = 33/60 (55%)
Frame = +2
Query: 329 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 508
F+ DG L+ S+ +D IW+ + Q +++ ++ ++ V+F PN + ++ D T+
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQ-VESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 576
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 48.4 bits (110), Expect = 5e-06
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +3
Query: 48 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ-SNL 224
GH + V WS + L+ S S+D +K+W LSSG C+ L N F+P +L
Sbjct: 675 GHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDL 733
Query: 225 IVSGSF 242
+V G +
Sbjct: 734 LVIGGY 739
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSS-GKCLKTLKGHS 182
IW + E T H I+DV + +S + ++S DKT+K+W+ S G L+T+ GH+
Sbjct: 536 IWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHA 595
Query: 183 NYVFCCNFNPQ 215
V +F+P+
Sbjct: 596 APVMSIDFHPK 606
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/60 (26%), Positives = 34/60 (56%)
Frame = +3
Query: 75 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 254
++S D +L+ SA DK + +W + + + T + H++ + F P S + + SFD+++
Sbjct: 517 SFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 576
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWE 140
++W + K T++GH+ IS +A S + ++ SAS DK++K+W+
Sbjct: 743 ELWNTMENKC-MTVAGHECVISALAQSPSTGVVASASHDKSVKIWK 787
Score = 36.7 bits (81), Expect = 0.016
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +2
Query: 254 WIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQCLKTLIDD 430
+IW++ T + H+ ++ V F + + + +SS+D +IWD + G L+T I
Sbjct: 535 FIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRT-ISG 593
Query: 431 DNPPVSFVKFSPNGKYILAATLDN 502
PV + F P +L + N
Sbjct: 594 HAAPVMSIDFHPKKTELLCSCDSN 617
Score = 35.5 bits (78), Expect = 0.036
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 2/111 (1%)
Frame = +2
Query: 257 IWDVRT-GKCLKPLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 430
IWD G L+ + H+ PV ++ F+ + L+ S + R WD + C++ +
Sbjct: 578 IWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRAVKGA 636
Query: 431 DNPPVSFVKFSPNGKYILAATLDNTLNYGTIAEENV*RHIRDTRTKNIVSL 583
V+F P LAA +NT++ I N +I + N+ S+
Sbjct: 637 STQ----VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSV 683
Score = 33.9 bits (74), Expect = 0.11
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +2
Query: 257 IWDVRTG-KCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 433
I+D+ K + HS V +V ++ +G L+ S S D + ++W +SG C+ L +
Sbjct: 660 IFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDAV-KLWSLSSGDCIHELSNSG 718
Query: 434 NPPVSFVKFSPN 469
N S V F P+
Sbjct: 719 NKFHSVV-FHPS 729
Score = 31.1 bits (67), Expect = 0.78
Identities = 15/60 (25%), Positives = 33/60 (55%)
Frame = +2
Query: 329 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 508
F+ DG L+ S+ +D IW+ + Q +++ ++ ++ V+F PN + ++ D T+
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQ-VESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 576
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 48.4 bits (110), Expect = 5e-06
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +3
Query: 48 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ-SNL 224
GH + V WS + L+ S S+D +K+W LSSG C+ L N F+P +L
Sbjct: 675 GHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDL 733
Query: 225 IVSGSF 242
+V G +
Sbjct: 734 LVIGGY 739
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSS-GKCLKTLKGHS 182
IW + E T H I+DV + +S + ++S DKT+K+W+ S G L+T+ GH+
Sbjct: 536 IWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHA 595
Query: 183 NYVFCCNFNPQ 215
V +F+P+
Sbjct: 596 APVMSIDFHPK 606
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/60 (26%), Positives = 34/60 (56%)
Frame = +3
Query: 75 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 254
++S D +L+ SA DK + +W + + + T + H++ + F P S + + SFD+++
Sbjct: 517 SFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 576
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWE 140
++W + K T++GH+ IS +A S + ++ SAS DK++K+W+
Sbjct: 743 ELWNTMENKC-MTVAGHECVISALAQSPSTGVVASASHDKSVKIWK 787
Score = 36.7 bits (81), Expect = 0.016
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +2
Query: 254 WIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQCLKTLIDD 430
+IW++ T + H+ ++ V F + + + +SS+D +IWD + G L+T I
Sbjct: 535 FIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRT-ISG 593
Query: 431 DNPPVSFVKFSPNGKYILAATLDN 502
PV + F P +L + N
Sbjct: 594 HAAPVMSIDFHPKKTELLCSCDSN 617
Score = 35.5 bits (78), Expect = 0.036
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 2/111 (1%)
Frame = +2
Query: 257 IWDVRT-GKCLKPLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 430
IWD G L+ + H+ PV ++ F+ + L+ S + R WD + C++ +
Sbjct: 578 IWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRAVKGA 636
Query: 431 DNPPVSFVKFSPNGKYILAATLDNTLNYGTIAEENV*RHIRDTRTKNIVSL 583
V+F P LAA +NT++ I N +I + N+ S+
Sbjct: 637 STQ----VRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSV 683
Score = 33.9 bits (74), Expect = 0.11
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +2
Query: 257 IWDVRTG-KCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 433
I+D+ K + HS V +V ++ +G L+ S S D + ++W +SG C+ L +
Sbjct: 660 IFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDAV-KLWSLSSGDCIHELSNSG 718
Query: 434 NPPVSFVKFSPN 469
N S V F P+
Sbjct: 719 NKFHSVV-FHPS 729
Score = 31.1 bits (67), Expect = 0.78
Identities = 15/60 (25%), Positives = 33/60 (55%)
Frame = +2
Query: 329 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 508
F+ DG L+ S+ +D IW+ + Q +++ ++ ++ V+F PN + ++ D T+
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQ-VESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 576
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 48.0 bits (109), Expect = 6e-06
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 3/109 (2%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW-DTASGQ--CLKTLID 427
++D +G+ L L HS V++V F D L++++S D RIW + G C TL +
Sbjct: 248 LFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTL-N 306
Query: 428 DDNPPVSFVKFSPNGKYILAATLDNTLNYGTIAEENV*RHIRDTRTKNI 574
D + V V P KY ++A+LD T + ++ + + D +KN+
Sbjct: 307 DHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDD-SKNV 354
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +3
Query: 24 GKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL---SSGKCLKTLKGHSNYVF 194
G+ T++GH ++ V + DS L+++AS DKT+++W + C TL HS V
Sbjct: 254 GQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVR 313
Query: 195 CCNFNPQSNLIVSGSFD 245
+P + VS S D
Sbjct: 314 AVTVHPTNKYFVSASLD 330
Score = 46.0 bits (104), Expect = 3e-05
Identities = 23/81 (28%), Positives = 44/81 (54%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
IWDV++ + H+ V+A+ F+ +G + +++ DG+ R+WD + K+ + D
Sbjct: 379 IWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDGV-RLWDLRKLRNFKSFLSAD- 436
Query: 437 PPVSFVKFSPNGKYILAATLD 499
+ V+F P+G Y+ A D
Sbjct: 437 --ANSVEFDPSGSYLGIAASD 455
Score = 31.9 bits (69), Expect = 0.45
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Frame = +3
Query: 3 KIW-GAYDGKFE--KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK 173
+IW DG + T++ H + V ++ VSAS D T ++LSSG CL +
Sbjct: 289 RIWRNPGDGNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVS 348
Query: 174 GHSNYV--FCCNFNPQSNLIVSGS 239
S V F+P ++ +G+
Sbjct: 349 DDSKNVDYTAAAFHPDGLILGTGT 372
Score = 31.1 bits (67), Expect = 0.78
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +1
Query: 514 WDYSRGKCLKTYTGH-KNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSG 690
+D S G CL + KN Y A G + +G+ ++V IW+++S+ V + G
Sbjct: 336 YDLSSGSCLAQVSDDSKNVDYTAAAFHP--DGLILGTGTSQSVVKIWDVKSQANVAKFDG 393
Query: 691 HTDTV 705
HT V
Sbjct: 394 HTGEV 398
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 48.0 bits (109), Expect = 6e-06
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 3/109 (2%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW-DTASGQ--CLKTLID 427
++D +G+ L L HS V++V F D L++++S D RIW + G C TL +
Sbjct: 248 LFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTL-N 306
Query: 428 DDNPPVSFVKFSPNGKYILAATLDNTLNYGTIAEENV*RHIRDTRTKNI 574
D + V V P KY ++A+LD T + ++ + + D +KN+
Sbjct: 307 DHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDD-SKNV 354
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +3
Query: 24 GKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL---SSGKCLKTLKGHSNYVF 194
G+ T++GH ++ V + DS L+++AS DKT+++W + C TL HS V
Sbjct: 254 GQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVR 313
Query: 195 CCNFNPQSNLIVSGSFD 245
+P + VS S D
Sbjct: 314 AVTVHPTNKYFVSASLD 330
Score = 46.0 bits (104), Expect = 3e-05
Identities = 23/81 (28%), Positives = 44/81 (54%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
IWDV++ + H+ V+A+ F+ +G + +++ DG+ R+WD + K+ + D
Sbjct: 379 IWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDGV-RLWDLRKLRNFKSFLSAD- 436
Query: 437 PPVSFVKFSPNGKYILAATLD 499
+ V+F P+G Y+ A D
Sbjct: 437 --ANSVEFDPSGSYLGIAASD 455
Score = 31.9 bits (69), Expect = 0.45
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Frame = +3
Query: 3 KIW-GAYDGKFE--KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK 173
+IW DG + T++ H + V ++ VSAS D T ++LSSG CL +
Sbjct: 289 RIWRNPGDGNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVS 348
Query: 174 GHSNYV--FCCNFNPQSNLIVSGS 239
S V F+P ++ +G+
Sbjct: 349 DDSKNVDYTAAAFHPDGLILGTGT 372
Score = 31.1 bits (67), Expect = 0.78
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +1
Query: 514 WDYSRGKCLKTYTGH-KNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSG 690
+D S G CL + KN Y A G + +G+ ++V IW+++S+ V + G
Sbjct: 336 YDLSSGSCLAQVSDDSKNVDYTAAAFHP--DGLILGTGTSQSVVKIWDVKSQANVAKFDG 393
Query: 691 HTDTV 705
HT V
Sbjct: 394 HTGEV 398
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 47.6 bits (108), Expect = 8e-06
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+WD+RT + + H V +V F+ +G + S D CRIWD + L + N
Sbjct: 156 VWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHVN 215
Query: 437 PPVSFVKFSPNGKYILA-ATLDNTLN 511
VS VK+ P +Y LA A+ D +N
Sbjct: 216 -LVSQVKYEPQERYFLATASHDMNVN 240
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +3
Query: 42 ISGHKMGISDVAWSS-DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNY 188
+ GHK ++DV +SS D + +AS D+T K+W+ + G L+T K S +
Sbjct: 102 LKGHKEHVTDVVFSSVDDECLATASTDRTEKIWK-TDGTLLQTFKASSGF 150
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +2
Query: 248 ECWIWDVRTGKCLKPLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLI 424
+C IWD+R K L +PAH + VS V + ++ + ++S+D IW +K+L+
Sbjct: 195 QCRIWDLRMRKLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRDFSLVKSLV 254
Query: 425 DDDNPPVS 448
++ S
Sbjct: 255 GHESKVAS 262
Score = 35.9 bits (79), Expect = 0.028
Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
++W + GH + V +S + + S +D ++W+L K L + H
Sbjct: 155 RVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHV 214
Query: 183 NYVFCCNFNPQSN-LIVSGSFDESV 254
N V + PQ + + S D +V
Sbjct: 215 NLVSQVKYEPQERYFLATASHDMNV 239
Score = 35.1 bits (77), Expect = 0.048
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLS 687
++WD + + + GH K + +FS G + SG EDN IW+L+ ++++ +
Sbjct: 155 RVWDLRTARNILIFQGHI--KQVLSVDFS-PNGYHLASGGEDNQCRIWDLRMRKLLYIIP 211
Query: 688 GHTDTV 705
H + V
Sbjct: 212 AHVNLV 217
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = +3
Query: 78 WSSDSRLI----VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 245
W +D L+ S+ D +VW+L + + + +GH V +F+P + SG D
Sbjct: 134 WKTDGTLLQTFKASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGED 193
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSR-LIVSASDDKTLKVWELSSGKCLKTLKGH 179
+IW K I H +S V + R + +AS D + +W +K+L GH
Sbjct: 197 RIWDLRMRKLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRDFSLVKSLVGH 256
Query: 180 SNYV 191
+ V
Sbjct: 257 ESKV 260
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 311 PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP-NGKYILA 487
P++ +RDG ++V+ S G+ ++W+ ++ V+ V FS + + +
Sbjct: 65 PLTGCSLSRDGKILVTCSLSGVPKLWEVPQVTNKIVVLKGHKEHVTDVVFSSVDDECLAT 124
Query: 488 ATLDNT 505
A+ D T
Sbjct: 125 ASTDRT 130
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/74 (28%), Positives = 36/74 (48%)
Frame = +1
Query: 487 GDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSK 666
G V +H +WD + ++ + GH+N C+ + G + SGS D V +WN++ K
Sbjct: 240 GGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRY---GTSELYSGSFDRTVKVWNVEDK 296
Query: 667 EIVQRLSGHTDTVL 708
+ GH +L
Sbjct: 297 AFITENHGHQGEIL 310
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/61 (31%), Positives = 35/61 (57%)
Frame = +3
Query: 72 VAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 251
+A SSD R + + D+ + +W++ + + ++ GH N V C F ++ + SGSFD +
Sbjct: 228 LAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRT 287
Query: 252 V 254
V
Sbjct: 288 V 288
Score = 38.7 bits (86), Expect = 0.004
Identities = 14/36 (38%), Positives = 25/36 (69%)
Frame = +1
Query: 604 GKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLC 711
G+++ +G D V+IW+++++E VQ GH +TV C
Sbjct: 234 GRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSC 269
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 391
IWDVRT + ++ P H + VS + F S + S S+D ++W+
Sbjct: 248 IWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWN 292
Score = 31.9 bits (69), Expect = 0.45
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +3
Query: 51 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK 155
H+ + VA S D SAS D T+ W++SSGK
Sbjct: 160 HRRSVVSVALSDDDSRGFSASKDGTIMHWDVSSGK 194
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/62 (22%), Positives = 27/62 (43%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSN 185
IW + + GH+ +S + + + + S S D+T+KVW + + GH
Sbjct: 248 IWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWNVEDKAFITENHGHQG 307
Query: 186 YV 191
+
Sbjct: 308 EI 309
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/81 (30%), Positives = 43/81 (53%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
++DV T K ++ H+D ++ + F+ DG ++SSS DG RIWD + + + D
Sbjct: 541 LYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDVILAKQIDGVHVD-- 598
Query: 437 PPVSFVKFSPNGKYILAATLD 499
P++ + SPN + A D
Sbjct: 599 VPITALSLSPNMDVLATAHSD 619
Score = 35.5 bits (78), Expect = 0.036
Identities = 24/103 (23%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Frame = +2
Query: 257 IWDVRTGKCLKPL-PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW--DTASG--QCLKTL 421
IW++ + + AH + +++F + +++S+S D ++W DT G + L+
Sbjct: 251 IWNLNKKRLQSVIRDAHDSSIISLNFLANEPVLMSASADNSLKMWIFDTNDGDPRLLRFR 310
Query: 422 IDDDNPPVSFVKFSPNGKYILAATLDNTLNYGTIAEENV*RHI 550
PP+ ++F NG++IL+A D ++ +E R +
Sbjct: 311 SGHSAPPLC-IRFYSNGRHILSAGQDRAFRLFSVIQEQQSREL 352
Score = 34.3 bits (75), Expect = 0.084
Identities = 13/43 (30%), Positives = 26/43 (60%)
Frame = +3
Query: 27 KFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK 155
K + GH I+D+ +S D + ++S+S D +L++W++ K
Sbjct: 548 KMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDVILAK 590
Score = 32.7 bits (71), Expect = 0.26
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Frame = +3
Query: 6 IWGAYDGKFEKTI-SGHKMGISDVAWSSDSRLIVSASDDKTLKVW--ELSSG--KCLKTL 170
IW + + I H I + + ++ +++SAS D +LK+W + + G + L+
Sbjct: 251 IWNLNKKRLQSVIRDAHDSSIISLNFLANEPVLMSASADNSLKMWIFDTNDGDPRLLRFR 310
Query: 171 KGHSNYVFCCNFNPQSNLIVSGSFDES 251
GHS C F I+S D +
Sbjct: 311 SGHSAPPLCIRFYSNGRHILSAGQDRA 337
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +2
Query: 314 VSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAA 490
V+A+ F+ DG L+ S G+ IW+ + + D + + + F N +++A
Sbjct: 227 VTALSFSTDGRPLLASGGSFGVISIWNLNKKRLQSVIRDAHDSSIISLNFLANEPVLMSA 286
Query: 491 TLDNTL 508
+ DN+L
Sbjct: 287 SADNSL 292
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/53 (20%), Positives = 31/53 (58%)
Frame = +3
Query: 96 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 254
L+ + +DD ++++++ + K ++ +GH++ + F+ ++S S D S+
Sbjct: 529 LLATVADDFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSL 581
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 46.8 bits (106), Expect = 1e-05
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Frame = +3
Query: 45 SGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGK--CLKTLKGHSNYVFCCNFNP- 212
+GHK + DVA+ S ++ S DD L +W+ +G +K K H + C ++NP
Sbjct: 278 NGHKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDARTGTSPAMKVEKAHDADLHCVDWNPH 337
Query: 213 QSNLIVSGSFDESV 254
+NLI++GS D +V
Sbjct: 338 DNNLILTGSADNTV 351
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +2
Query: 248 ECWIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 388
+ ++W+V TGK LK H V+ + F+ D SL+VS S DG R+W
Sbjct: 101 DIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVW 147
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/64 (32%), Positives = 35/64 (54%)
Frame = +3
Query: 63 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 242
I +A +++ +V + +WE+++GK LK GH V C F+ +L+VSGS
Sbjct: 81 IKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQ 140
Query: 243 DESV 254
D S+
Sbjct: 141 DGSI 144
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Frame = +3
Query: 30 FEKTISGHKMGISDVA--WSSDSRLIVSASDDKTLKVWELSSGKCLKTL 170
+E + H M ++D+ + + +I+S+S+D+T KVW LS GK LK +
Sbjct: 165 YEHNFNEHTMSVTDIVIDYGGCNAVIISSSEDRTCKVWSLSRGKLLKNI 213
Score = 41.1 bits (92), Expect = 7e-04
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 481 IGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL- 657
+GG + LW+ + GK LK + GH C+ FS +VSGS+D + +W+L
Sbjct: 94 VGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLV--FS-GDDSLLVSGSQDGSIRVWSLI 150
Query: 658 QSKEIVQRLSGHT 696
+ + QR G+T
Sbjct: 151 RLFDDFQRQQGNT 163
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL 143
+W GK K GH ++ + +S D L+VS S D +++VW L
Sbjct: 104 LWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSL 149
Score = 34.3 bits (75), Expect = 0.084
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +2
Query: 344 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLNYGTI 523
++I+SSS D C++W + G+ LK +I ++ + P G A D+ + G I
Sbjct: 188 AVIISSSEDRTCKVWSLSRGKLLKNIIFPS--VINALALDPGGCVFYAGARDSKIYIGAI 245
Score = 32.7 bits (71), Expect = 0.26
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +2
Query: 314 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 424
++ + + DG+L++S S DG+ +WD S + ++TLI
Sbjct: 266 ITCLAYCADGNLLISGSEDGVVCVWDPKSLRHVRTLI 302
Score = 31.5 bits (68), Expect = 0.59
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +2
Query: 254 WIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 415
W W + +K P +P+ A+ N +G+ +V G +W+ A+G+ LK
Sbjct: 64 WSWTKPQAE-VKSYPV--EPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLK 114
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/44 (29%), Positives = 27/44 (61%)
Frame = +3
Query: 39 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL 170
++S I+ +A+ +D L++S S+D + VW+ S + ++TL
Sbjct: 258 SVSEKGKAITCLAYCADGNLLISGSEDGVVCVWDPKSLRHVRTL 301
Score = 28.7 bits (61), Expect = 4.2
Identities = 9/36 (25%), Positives = 21/36 (58%)
Frame = +1
Query: 604 GKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLC 711
G ++V G +Y+W + + +++++ GH +V C
Sbjct: 90 GTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTC 125
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = +3
Query: 36 KTISGHKMGISDVAWSSDSRL-IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 212
+T+ H V + +L +VS DD +K W+++ + L GH +YV C + +P
Sbjct: 129 RTLRSHSAPARFVKYPVQDKLHLVSGGDDGVVKYWDVAGATVISDLLGHKDYVRCGDCSP 188
Query: 213 -QSNLIVSGSFDESV 254
+++V+GS+D +V
Sbjct: 189 VNDSMLVTGSYDHTV 203
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/84 (26%), Positives = 36/84 (42%)
Frame = +1
Query: 475 IYIGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 654
++ D+ Q++D L+T H F + V +VSG +D +V W+
Sbjct: 107 LFAACDLSGVVQVFDIKERMALRTLRSHSAPAR--FVKYPVQDKLHLVSGGDDGVVKYWD 164
Query: 655 LQSKEIVQRLSGHTDTVLCTACHP 726
+ ++ L GH D V C C P
Sbjct: 165 VAGATVISDLLGHKDYVRCGDCSP 188
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSL-IVSSSYDGLCRIWDTASGQCLKTLI 424
++D++ L+ L +HS P V + L +VS DG+ + WD A + L+
Sbjct: 119 VFDIKERMALRTLRSHSAPARFVKYPVQDKLHLVSGGDDGVVKYWDVAGATVISDLL 175
Score = 31.1 bits (67), Expect = 0.78
Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Frame = +2
Query: 260 WDVRTGKCLKPLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
WDV + L H D V + + S++V+ SYD ++WD +
Sbjct: 163 WDVAGATVISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWDARVHTSNWIAEINHG 222
Query: 437 PPVSFVKFSPNGKYILAA 490
PV V + P+G I A
Sbjct: 223 LPVEDVVYLPSGGLIATA 240
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 46.4 bits (105), Expect = 2e-05
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Frame = +2
Query: 257 IWDVRTGKCLKPL----PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQCLKTL 421
IW ++ G +P AH+D +++V F+ DG +++S S+DG ++WD + LK
Sbjct: 353 IWSLKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILLSRSFDGSLKVWDLRQMKEALKVF 412
Query: 422 IDDDN-PPVSFVKFSPNGKYILAAT 493
N P + V FSP+ + IL T
Sbjct: 413 EGLPNYYPQTNVAFSPDEQIILTGT 437
Score = 45.6 bits (103), Expect = 3e-05
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Frame = +3
Query: 51 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK-CLKTLKGHSNYVFCCN--FNPQSN 221
H I+ V +SSD R+++S S D +LKVW+L K LK +G NY N F+P
Sbjct: 372 HTDDITSVKFSSDGRILLSRSFDGSLKVWDLRQMKEALKVFEGLPNYYPQTNVAFSPDEQ 431
Query: 222 LIVSGS 239
+I++G+
Sbjct: 432 IILTGT 437
Score = 34.7 bits (76), Expect = 0.064
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 9/93 (9%)
Frame = +2
Query: 257 IWDVRT----GKCLKPLPAHSD--PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 418
IWDV + +KP A PV+ ++RDG I DG +IW G +
Sbjct: 305 IWDVNNFLSQTQVIKPKLARPGRVPVTTCAWDRDGKRIAGGVGDGSIQIWSLKPGWGSRP 364
Query: 419 LI---DDDNPPVSFVKFSPNGKYILAATLDNTL 508
I ++ VKFS +G+ +L+ + D +L
Sbjct: 365 DIYVGKAHTDDITSVKFSSDGRILLSRSFDGSL 397
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +3
Query: 54 KMGISDVAWSSDSRLIVSASDDKTLKVWELSSG----KCLKTLKGHSNYVFCCNFNPQSN 221
++ ++ AW D + I D ++++W L G + K H++ + F+
Sbjct: 327 RVPVTTCAWDRDGKRIAGGVGDGSIQIWSLKPGWGSRPDIYVGKAHTDDITSVKFSSDGR 386
Query: 222 LIVSGSFDESV 254
+++S SFD S+
Sbjct: 387 ILLSRSFDGSL 397
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Frame = +3
Query: 12 GAYDGKFEKTISGHKMGISDVAWSSDSR--LIVSASDDKTLKVWELSSGKCLKTLKGHSN 185
G D + I H G++D+A+S+ ++ + + DDKT+KVW+ ++G T +GH
Sbjct: 448 GGEDMRQHLEIDAHVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEA 507
Query: 186 --YVFCCNFNPQSNLIVSGSFDESV 254
Y C ++ I S + D +
Sbjct: 508 PVYSICPHYKENIQFIFSTALDGKI 532
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +3
Query: 87 DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 245
D+ +I DD T++++ + + LKGHS + F+ N++VS D
Sbjct: 877 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGAD 929
Score = 31.9 bits (69), Expect = 0.45
Identities = 17/85 (20%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Frame = +3
Query: 9 WGAYDGKFEKTISG-HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSN 185
W +G ++T G HK + V + + ++A DD ++K W++ + + L +
Sbjct: 581 WNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDTIQLLTAIDADGG 640
Query: 186 YVFC--CNFNPQSNLIVSGSFDESV 254
FN + +L+ + D +
Sbjct: 641 LQASPRIRFNKEGSLLAVSANDNMI 665
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 394
I++VR + L HS ++ + F+ +++VSS D +W+T
Sbjct: 892 IYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT 937
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/50 (26%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +2
Query: 260 WDVRTGKCLKPLPAHSDPVSA--VHFNRDGSLIVSSSYDGLCRIWDTASG 403
WD+ T + L + A ++ + FN++GSL+ S+ D + ++ + G
Sbjct: 624 WDMDTIQLLTAIDADGGLQASPRIRFNKEGSLLAVSANDNMIKVMANSDG 673
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Frame = +3
Query: 12 GAYDGKFEKTISGHKMGISDVAWSSDSR--LIVSASDDKTLKVWELSSGKCLKTLKGHSN 185
G D + I H G++D+A+S+ ++ + + DDKT+KVW+ ++G T +GH
Sbjct: 448 GGEDMRQHLEIDAHVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEA 507
Query: 186 --YVFCCNFNPQSNLIVSGSFDESV 254
Y C ++ I S + D +
Sbjct: 508 PVYSICPHYKENIQFIFSTALDGKI 532
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +3
Query: 87 DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 245
D+ +I DD T++++ + + LKGHS + F+ N++VS D
Sbjct: 877 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGAD 929
Score = 31.9 bits (69), Expect = 0.45
Identities = 17/85 (20%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Frame = +3
Query: 9 WGAYDGKFEKTISG-HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSN 185
W +G ++T G HK + V + + ++A DD ++K W++ + + L +
Sbjct: 581 WNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDTIQLLTAIDADGG 640
Query: 186 YVFC--CNFNPQSNLIVSGSFDESV 254
FN + +L+ + D +
Sbjct: 641 LQASPRIRFNKEGSLLAVSANDNMI 665
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 394
I++VR + L HS ++ + F+ +++VSS D +W+T
Sbjct: 892 IYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT 937
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/50 (26%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +2
Query: 260 WDVRTGKCLKPLPAHSDPVSA--VHFNRDGSLIVSSSYDGLCRIWDTASG 403
WD+ T + L + A ++ + FN++GSL+ S+ D + ++ + G
Sbjct: 624 WDMDTIQLLTAIDADGGLQASPRIRFNKEGSLLAVSANDNMIKVMANSDG 673
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Frame = +3
Query: 12 GAYDGKFEKTISGHKMGISDVAWSSDSR--LIVSASDDKTLKVWELSSGKCLKTLKGHSN 185
G D + I H G++D+++S+ ++ +++ DDKT+KVW+ ++G T +GH
Sbjct: 448 GGEDMRQHLEIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEA 507
Query: 186 --YVFCCNFNPQSNLIVSGSFDESV 254
Y C ++ I S + D +
Sbjct: 508 PVYSVCPHYKENIQFIFSTALDGKI 532
Score = 34.7 bits (76), Expect = 0.064
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Frame = +3
Query: 9 WGAYDGKFEKTISG-HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSN 185
W +G ++T G HK + V + + ++A DD ++K W++ + + L + G
Sbjct: 581 WNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDAVQLLTAIDGDGG 640
Query: 186 YVFC--CNFNPQSNLI-VSGS 239
FN + +L+ VSG+
Sbjct: 641 LQASPRIRFNKEGSLLAVSGN 661
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +3
Query: 87 DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 245
D+ +I DD T++++ + + LKGHS + F+ N++VS D
Sbjct: 888 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGAD 940
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 394
I++VR + L HS ++ + F+ +++VSS D +W+T
Sbjct: 903 IYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT 948
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Frame = +3
Query: 12 GAYDGKFEKTISGHKMGISDVAWSSDSR--LIVSASDDKTLKVWELSSGKCLKTLKGHSN 185
G D + I H G++D+++S+ ++ +++ DDKT+KVW+ ++G T +GH
Sbjct: 448 GGEDMRQHLEIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEA 507
Query: 186 --YVFCCNFNPQSNLIVSGSFDESV 254
Y C ++ I S + D +
Sbjct: 508 PVYSVCPHYKENIQFIFSTALDGKI 532
Score = 34.7 bits (76), Expect = 0.064
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Frame = +3
Query: 9 WGAYDGKFEKTISG-HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSN 185
W +G ++T G HK + V + + ++A DD ++K W++ + + L + G
Sbjct: 581 WNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDAVQLLTAIDGDGG 640
Query: 186 YVFC--CNFNPQSNLI-VSGS 239
FN + +L+ VSG+
Sbjct: 641 LQASPRIRFNKEGSLLAVSGN 661
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +3
Query: 87 DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 245
D+ +I DD T++++ + + LKGHS + F+ N++VS D
Sbjct: 888 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGAD 940
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 394
I++VR + L HS ++ + F+ +++VSS D +W+T
Sbjct: 903 IYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT 948
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 46.0 bits (104), Expect = 3e-05
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +2
Query: 302 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 481
H D VS + +RDG+L+ S S+D +IW T +CL++ + + ++ V S NG I
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENGD-I 222
Query: 482 LAATLDNTLNY--GTIAEENV 538
+ D + I EENV
Sbjct: 223 YTGSSDQRIKVWRKNINEENV 243
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +3
Query: 51 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL-KGHSNYVFCCNFNPQSNLI 227
H +S +A S D L+ S S D+TLK+W + KCL++ H + + + + I
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENGD-I 222
Query: 228 VSGSFDESV 254
+GS D+ +
Sbjct: 223 YTGSSDQRI 231
Score = 33.1 bits (72), Expect = 0.19
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +3
Query: 42 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG--KCLKTLKGHSNYVFC 197
+ GH + +A SD ++ S S DKT+++W+ S+ CL L+GH V C
Sbjct: 301 LRGHTESVLCLAVVSD--ILCSGSADKTVRLWKCSAKDYSCLAMLEGHLGPVKC 352
Score = 31.1 bits (67), Expect = 0.78
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Frame = +1
Query: 592 SVTGGKWIVSGSEDNLVYIWNLQSKE---IVQRLSGHTDTVLCTA 717
S T G + SG D + +W +V L GHT++VLC A
Sbjct: 268 SGTNGSLLHSGGSDGSILVWERDDGGDIVVVGMLRGHTESVLCLA 312
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/81 (25%), Positives = 41/81 (50%)
Frame = +2
Query: 248 ECWIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 427
EC I D +GK + L H D A ++ +G ++ + + D CR+WD + ++
Sbjct: 271 ECLISDSHSGKVISSLRGHKDYSFASAWHPNGLILATGNQDTACRLWDIRNPSESFAVLK 330
Query: 428 DDNPPVSFVKFSPNGKYILAA 490
+ + +KF+P G+++ A
Sbjct: 331 GNMGAIRGLKFTPEGRFLAMA 351
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/61 (24%), Positives = 33/61 (54%)
Frame = +3
Query: 63 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 242
+++ + S D +L+ D + + SGK + +L+GH +Y F ++P ++ +G+
Sbjct: 251 VNNTSVSPDGKLLAVVGDSTECLISDSHSGKVISSLRGHKDYSFASAWHPNGLILATGNQ 310
Query: 243 D 245
D
Sbjct: 311 D 311
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/72 (19%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +3
Query: 15 AYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL-SSGKCLKTLKGHSNYV 191
++ GK ++ GHK AW + ++ + + D ++W++ + + LKG+ +
Sbjct: 277 SHSGKVISSLRGHKDYSFASAWHPNGLILATGNQDTACRLWDIRNPSESFAVLKGNMGAI 336
Query: 192 FCCNFNPQSNLI 227
F P+ +
Sbjct: 337 RGLKFTPEGRFL 348
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 45.2 bits (102), Expect = 4e-05
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Frame = +3
Query: 48 GHKMGISDVAWSSDSRLIVSASDDKTLKVWEL-----SSGKCLKTLKGHSNYVFCCNFNP 212
GHK + VAW+S+ + S S D+T ++W + S K L+ LKGH++ V ++P
Sbjct: 18 GHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLE-LKGHTDSVDQLCWDP 76
Query: 213 Q-SNLIVSGSFDESV 254
+ S+L+ + S D+SV
Sbjct: 77 KHSDLVATASGDKSV 91
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 42 ISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 218
+ GH + + W S L+ +AS DK++++W+ SGKC + ++ S + P
Sbjct: 62 LKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDARSGKCTQQVE-LSGENINITYKPDG 120
Query: 219 NLIVSGSFDESV 254
+ G+ D+ +
Sbjct: 121 THVAVGNRDDEL 132
Score = 36.7 bits (81), Expect = 0.016
Identities = 22/74 (29%), Positives = 35/74 (47%)
Frame = +2
Query: 278 KCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 457
K L L AH+ + + G S D L +WD + CL+T + PV +
Sbjct: 182 KPLDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLE-WPVRTIS 240
Query: 458 FSPNGKYILAATLD 499
F+ +G+YI +A+ D
Sbjct: 241 FNYSGEYIASASED 254
Score = 36.7 bits (81), Expect = 0.016
Identities = 24/81 (29%), Positives = 39/81 (48%)
Frame = +1
Query: 442 CFVC*ILTEWKIYIGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 621
C+ I + + + G LWD S CL+T+T + I N+S G++I S
Sbjct: 194 CYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTISFNYS---GEYIAS 250
Query: 622 GSEDNLVYIWNLQSKEIVQRL 684
SED + I N+Q+ V ++
Sbjct: 251 ASEDLFIDIANVQTGRTVHQI 271
Score = 35.1 bits (77), Expect = 0.048
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +1
Query: 541 KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ----SKEIVQRLSGHTDTV 705
+ Y GHK + + + N + G + SGS D IWN++ SK L GHTD+V
Sbjct: 14 REYQGHKKKVHSVAWN---SNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSV 69
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +2
Query: 293 LPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTL-IDDDNPPVSFVKFSP 466
L H+D V + ++ + L+ ++S D R+WD SG+C + + + +N ++ + P
Sbjct: 62 LKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDARSGKCTQQVELSGENINIT---YKP 118
Query: 467 NGKYILAATLDNTL 508
+G ++ D+ L
Sbjct: 119 DGTHVAVGNRDDEL 132
Score = 32.7 bits (71), Expect = 0.26
Identities = 19/69 (27%), Positives = 28/69 (40%)
Frame = +3
Query: 39 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 218
T++ H G +A R S D + +W++S CL+T V +FN
Sbjct: 186 TLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTISFNYSG 245
Query: 219 NLIVSGSFD 245
I S S D
Sbjct: 246 EYIASASED 254
Score = 31.9 bits (69), Expect = 0.45
Identities = 21/88 (23%), Positives = 37/88 (42%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+WD+ CL+ PV + FN G I S+S D I + +G+ + +
Sbjct: 217 LWDISDMLCLRTFTKLEWPVRTISFNYSGEYIASASEDLFIDIANVQTGRTVHQI--PCR 274
Query: 437 PPVSFVKFSPNGKYILAATLDNTLNYGT 520
++ V+++P + A D Y T
Sbjct: 275 AAMNSVEWNPKYNLLAYAGDDKNPKYNT 302
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +3
Query: 42 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS- 218
I+G + W + + ++ S S+DK +KVW++++GKC T++ H V +N +
Sbjct: 212 IAGQTLFFLTFNWENRN-IVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTP 270
Query: 219 NLIVSGSFDESV 254
+++SGS D +V
Sbjct: 271 EVLLSGSRDRTV 282
Score = 31.5 bits (68), Expect = 0.59
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +3
Query: 42 ISGHKMGISDVAWSSDS-RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 218
I H +S ++++ + L+ + S D+++K+W+LS+ + N V N N
Sbjct: 341 IHAHDSEVSSISYNIHAPNLLATGSADESVKLWDLSNNQPSWIATNKPNAVRAMNKNFCC 400
Query: 219 NLIVSGSF 242
++ VSG F
Sbjct: 401 HMFVSGFF 408
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNR-DGSLIVSSSYD 370
+WDV TGKC + H V AV +N +++S S D
Sbjct: 241 VWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRD 279
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSS-DSRLIVSASDDKTL 128
K+W GK + T+ H+ + VAW++ +++S S D+T+
Sbjct: 240 KVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTV 282
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/57 (24%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +2
Query: 344 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP--PVSFVKFSPNGKYILAATLDNTL 508
+++ S S D ++WD A+G+C T+ + V++ ++P + +L+ + D T+
Sbjct: 228 NIVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTP--EVLLSGSRDRTV 282
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +1
Query: 475 IYIGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYI 648
I G + ++WD + GKC T H+ + + + N + T + ++SGS D V +
Sbjct: 229 IVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWN-NYT-PEVLLSGSRDRTVVL 284
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 45.2 bits (102), Expect = 4e-05
Identities = 25/68 (36%), Positives = 38/68 (55%)
Frame = +3
Query: 51 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 230
H IS +A S D RL+ S S DKT KVW +S +C++++ H + V + L+
Sbjct: 210 HLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESVNAHEDAVNAV-VSGFDGLVF 268
Query: 231 SGSFDESV 254
+GS D +V
Sbjct: 269 TGSADGTV 276
Score = 35.9 bits (79), Expect = 0.028
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 388
+W V +C++ + AH D V+AV DG L+ + S DG ++W
Sbjct: 237 VWRVSDLRCVESVNAHEDAVNAVVSGFDG-LVFTGSADGTVKVW 279
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/40 (25%), Positives = 23/40 (57%)
Frame = +2
Query: 302 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 421
H D +S + + D L+ S S+D ++W + +C++++
Sbjct: 210 HLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESV 249
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 44.8 bits (101), Expect = 6e-05
Identities = 24/65 (36%), Positives = 38/65 (58%)
Frame = +3
Query: 51 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 230
H +S ++ + D L+ S S DKTLKVW LS KCL++++ H + V + +L+
Sbjct: 244 HFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTV-VSGFDDLVF 302
Query: 231 SGSFD 245
+GS D
Sbjct: 303 TGSAD 307
Score = 35.5 bits (78), Expect = 0.036
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 388
+W + KCL+ + AH D V+ V D L+ + S DG ++W
Sbjct: 271 VWRLSDSKCLESIEAHDDAVNTVVSGFD-DLVFTGSADGTLKVW 313
Score = 35.1 bits (77), Expect = 0.048
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +2
Query: 302 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
H D VS + N D L+ S S+D ++W + +CL+++ D+
Sbjct: 244 HFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHDD 288
Score = 35.1 bits (77), Expect = 0.048
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 6/92 (6%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELS-SGKCLK----- 164
K+W D K ++I H ++ V D L+ + S D TLKVW+ GK +K
Sbjct: 270 KVWRLSDSKCLESIEAHDDAVNTVVSGFDD-LVFTGSADGTLKVWKREVQGKEMKHVLVQ 328
Query: 165 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVGY 260
L N V N ++ GS D +V +
Sbjct: 329 VLMKQENAVTALAVNLTDAVVYCGSSDGTVNF 360
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 44.8 bits (101), Expect = 6e-05
Identities = 22/68 (32%), Positives = 40/68 (58%)
Frame = +3
Query: 51 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 230
H +S ++ + D L+ SAS D+T+KVW + KC++++K H + V + +L+
Sbjct: 134 HSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAV--NSVTTAESLVF 191
Query: 231 SGSFDESV 254
+GS D +V
Sbjct: 192 TGSADGTV 199
Score = 34.3 bits (75), Expect = 0.084
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 388
+W + KC++ + AH D V++V SL+ + S DG ++W
Sbjct: 161 VWRIHDLKCIESIKAHDDAVNSV--TTAESLVFTGSADGTVKVW 202
Score = 31.9 bits (69), Expect = 0.45
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +2
Query: 302 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
HSD VS + D L+ S+S+D ++W +C++++ D+
Sbjct: 134 HSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDD 178
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 44.8 bits (101), Expect = 6e-05
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSS-DSRLIVSASDDKTLKVWELSSGKC-LKTLKG 176
+IW + I H I W+ D ++ ++S DKT+KVW++ S + L L G
Sbjct: 175 RIWDVREPGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKVWDVRSYRVPLAVLNG 234
Query: 177 HSNYVFCCNFNP-QSNLIVSGSFDESV 254
H V F+P + +LI S S+D SV
Sbjct: 235 HGYAVRKVKFSPHRRSLIASCSYDMSV 261
Score = 44.8 bits (101), Expect = 6e-05
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 433
IWDVR +PAH + + +N+ D ++ +SS D ++WD S + +++
Sbjct: 176 IWDVREPGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKVWDVRSYRVPLAVLNGH 235
Query: 434 NPPVSFVKFSPNGKYILAA 490
V VKFSP+ + ++A+
Sbjct: 236 GYAVRKVKFSPHRRSLIAS 254
Score = 35.1 bits (77), Expect = 0.048
Identities = 18/86 (20%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKGH 179
K+W +T H + W+ + SAS D TL++W++ + H
Sbjct: 132 KLWAMDRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIPAH 191
Query: 180 SNYVFCCNFNPQSN-LIVSGSFDESV 254
+ C++N + ++ + S D++V
Sbjct: 192 DFEILSCDWNKYDDCILATSSVDKTV 217
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +3
Query: 36 KTISGHKMGISDVAWSSDSR-LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 212
++ H + V ++ R +++S D T+K+W + ++T K H+ V+ +NP
Sbjct: 100 RSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNP 159
Query: 213 Q-SNLIVSGSFD 245
+ ++ S S D
Sbjct: 160 KHGDVFASASGD 171
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 257 IWDVRTGKC-LKPLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWD 391
+WDVR+ + L L H V V F+ SLI S SYD +WD
Sbjct: 219 VWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWD 265
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 44.8 bits (101), Expect = 6e-05
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +3
Query: 24 GKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG---KCLKTLKGHSNYVF 194
G+ T++GH ++ + + D+ L+++AS DKT+++W S TLK HS V
Sbjct: 254 GQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVR 313
Query: 195 CCNFNPQSNLIVSGSFDES 251
+ + VS S D +
Sbjct: 314 AVTVHATNKYFVSASLDST 332
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA--SGQCLKTLIDD 430
++D +G+ L L HS V+++ F D L++++S D RIW + + + D
Sbjct: 248 LFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKD 307
Query: 431 DNPPVSFVKFSPNGKYILAATLDNT 505
+ V V KY ++A+LD+T
Sbjct: 308 HSAEVRAVTVHATNKYFVSASLDST 332
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/81 (27%), Positives = 42/81 (51%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
IWDV++ + H+ ++++ F+ +G + +++ DG+ R+WD LK D
Sbjct: 380 IWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALDGV-RLWDLRK---LKNFRTFDF 435
Query: 437 PPVSFVKFSPNGKYILAATLD 499
P + V+F +G Y+ A D
Sbjct: 436 PDANSVEFDHSGSYLGIAASD 456
Score = 35.1 bits (77), Expect = 0.048
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Frame = +3
Query: 3 KIWG-AYDGKFEK--TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK 173
+IWG + DG + T+ H + V + ++ VSAS D T ++LSSG CL +
Sbjct: 289 RIWGCSEDGNYTSRHTLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVT 348
Query: 174 GHS----NYVFCCNFNPQSNLIVSGS 239
S NY F+P ++ +G+
Sbjct: 349 DASENDVNYT-AAAFHPDGLILGTGT 373
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/78 (21%), Positives = 32/78 (41%)
Frame = +1
Query: 472 KIYIGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 651
K ++ + +D S G CL T A G + +G+ ++V IW
Sbjct: 322 KYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTAAAFHPDGLILGTGTAQSIVKIW 381
Query: 652 NLQSKEIVQRLSGHTDTV 705
+++S+ V + GH +
Sbjct: 382 DVKSQANVAKFGGHNGEI 399
Score = 28.7 bits (61), Expect = 4.2
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDP-VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC----LKTL 421
+WD+R LK P ++V F+ GS + ++ D R++ AS + +KTL
Sbjct: 421 LWDLRK---LKNFRTFDFPDANSVEFDHSGSYLGIAASD--IRVFQAASVKAEWNPIKTL 475
Query: 422 ID-DDNPPVSFVKFSPNGKYILAATLDNTLN-YGTIAEEN 535
D + VKF + KYI ++D L +G ++N
Sbjct: 476 PDLSGTGKATSVKFGLDSKYIAVGSMDRNLRIFGLPDDDN 515
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +1
Query: 553 GHKNEKYCIFA-NFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 705
G + + C+ A +FS G ++I SG +V IW+LQ K +++L GHT T+
Sbjct: 87 GGDSAEECLSAISFSKKGSRYICSGGTGQIVKIWDLQRKLCIKKLKGHTSTI 138
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/82 (24%), Positives = 39/82 (47%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
IWD++ C+K L H+ ++ V +N + S S G + + ASG L D +
Sbjct: 119 IWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVSVGGDLIVHNLASGARATELKDPNG 178
Query: 437 PPVSFVKFSPNGKYILAATLDN 502
+ + +S + +++L D+
Sbjct: 179 QVLRLLDYSRSSRHLLVTAGDD 200
Score = 35.9 bits (79), Expect = 0.028
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +3
Query: 63 ISDVAWSSD-SRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 239
+S +++S SR I S + +K+W+L C+K LKGH++ + +N + + S S
Sbjct: 95 LSAISFSKKGSRYICSGGTGQIVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVS 154
Score = 31.5 bits (68), Expect = 0.59
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 347 LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAA 490
L+V++ DG +WDT + + + P + V FSP+ + I+A+
Sbjct: 193 LLVTAGDDGTVHLWDTTGRSPKMSWLKQHSAPTAGVCFSPSNEKIIAS 240
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +3
Query: 36 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKT--LKGHSNYVFCCNFN 209
K +G + + D + SS L+V+A DD T+ +W+ ++G+ K LK HS F+
Sbjct: 174 KDPNGQVLRLLDYSRSS-RHLLVTAGDDGTVHLWD-TTGRSPKMSWLKQHSAPTAGVCFS 231
Query: 210 PQSNLIVS 233
P + I++
Sbjct: 232 PSNEKIIA 239
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = +3
Query: 9 WGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNY 188
+GA D +T+ GH + + W+ + IVSAS D L VW + + +K +
Sbjct: 50 FGATDLVCCRTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAW 109
Query: 189 VFCCNFNPQSNLIVSGSFD 245
V C F+P + G D
Sbjct: 110 VMTCAFSPNGQSVACGGLD 128
Score = 37.1 bits (82), Expect = 0.012
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Frame = +2
Query: 251 CWIWDVRTGKCLKPLPAHSD----PVSAVHFNRDGSLIVSS-SYDGLCRIWDTASGQ 406
C ++D+RTG L+ H D PV+++ F+ G L+ + + + C +WDT G+
Sbjct: 272 CRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGE 328
Score = 34.3 bits (75), Expect = 0.084
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +2
Query: 281 CLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT-LIDDDNPPVSFVK 457
C + L H+ V ++ + + + IVS+S DG +W+ + Q KT I V
Sbjct: 57 CCRTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQ--KTHAIKLPCAWVMTCA 114
Query: 458 FSPNGKYILAATLDN 502
FSPNG+ + LD+
Sbjct: 115 FSPNGQSVACGGLDS 129
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 105 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 245
SA+ +T + + C +TL+GH+ V+ ++ P+ N IVS S D
Sbjct: 40 SAAQGRTRVSFGATDLVCCRTLQGHTGKVYSLDWTPERNRIVSASQD 86
Score = 32.7 bits (71), Expect = 0.26
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Frame = +2
Query: 251 CWIWDVRTGKCLKPL-----PAHSDPVSAVHFNRDG-SLIVSSSYDGLCRIWDT-ASGQC 409
C +WDV TG H+ V +V + + +S S D R+WDT A+ +
Sbjct: 181 CILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRA 240
Query: 410 LKTLIDDDNPPVSFVKFSPNG 472
++T + V+ VKF P+G
Sbjct: 241 VRTFHGHEG-DVNTVKFFPDG 260
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/50 (24%), Positives = 27/50 (54%)
Frame = +3
Query: 36 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSN 185
+T GH+ ++ V + D + SDD T +++++ +G L+ + H +
Sbjct: 242 RTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGD 291
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Frame = +1
Query: 511 LWDYSRGKCLKTYTGHKNEKYCI-FANFSVTGGK--WIVSGSEDNLVYIWNLQ-SKEIVQ 678
LWD + G + G + + S++G W +SGS D+ +W+ + + V+
Sbjct: 183 LWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVR 242
Query: 679 RLSGHTDTV 705
GH V
Sbjct: 243 TFHGHEGDV 251
Score = 27.5 bits (58), Expect = 9.6
Identities = 19/90 (21%), Positives = 36/90 (40%), Gaps = 8/90 (8%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK-------CLK 164
+W A + I + A+S + + + D ++ LSS +
Sbjct: 91 VWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSR 150
Query: 165 TLKGHSNYVFCCNFNPQSNL-IVSGSFDES 251
L GH YV CC + P + +++ S D++
Sbjct: 151 MLTGHRGYVSCCQYVPNEDAHLITSSGDQT 180
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = +3
Query: 9 WGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNY 188
+GA D +T+ GH + + W+ + IVSAS D L VW + + +K +
Sbjct: 50 FGATDLVCCRTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAW 109
Query: 189 VFCCNFNPQSNLIVSGSFD 245
V C F+P + G D
Sbjct: 110 VMTCAFSPNGQSVACGGLD 128
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Frame = +2
Query: 251 CWIWDVRTGKCLKPLPAHSD----PVSAVHFNRDGSLIVSS-SYDGLCRIWDTASGQCLK 415
C ++D+RTG L+ H D PV+++ F+ G L+ + + + C +WDT G+ +
Sbjct: 272 CRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVL 331
Query: 416 TL---IDDDNPPVSFVKFSPNGKYILAATLDNTL 508
L D +S + S +G + + D+ L
Sbjct: 332 DLGLQQDSHRNRISCLGLSADGSALCTGSWDSNL 365
Score = 34.3 bits (75), Expect = 0.084
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +2
Query: 281 CLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT-LIDDDNPPVSFVK 457
C + L H+ V ++ + + + IVS+S DG +W+ + Q KT I V
Sbjct: 57 CCRTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQ--KTHAIKLPCAWVMTCA 114
Query: 458 FSPNGKYILAATLDN 502
FSPNG+ + LD+
Sbjct: 115 FSPNGQSVACGGLDS 129
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 105 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 245
SA+ +T + + C +TL+GH+ V+ ++ P+ N IVS S D
Sbjct: 40 SAAQGRTRVSFGATDLVCCRTLQGHTGKVYSLDWTPERNRIVSASQD 86
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +2
Query: 251 CWIWDVRTGKCLKPL----PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 388
C++WD G+ + L +H + +S + + DGS + + S+D +IW
Sbjct: 319 CYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCTGSWDSNLKIW 368
Score = 32.7 bits (71), Expect = 0.26
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Frame = +2
Query: 251 CWIWDVRTGKCLKPL-----PAHSDPVSAVHFNRDG-SLIVSSSYDGLCRIWDT-ASGQC 409
C +WDV TG H+ V +V + + +S S D R+WDT A+ +
Sbjct: 181 CILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRA 240
Query: 410 LKTLIDDDNPPVSFVKFSPNG 472
++T + V+ VKF P+G
Sbjct: 241 VRTFHGHEG-DVNTVKFFPDG 260
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/50 (24%), Positives = 27/50 (54%)
Frame = +3
Query: 36 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSN 185
+T GH+ ++ V + D + SDD T +++++ +G L+ + H +
Sbjct: 242 RTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGD 291
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Frame = +1
Query: 511 LWDYSRGKCLKTYTGHKNEKYCI-FANFSVTGGK--WIVSGSEDNLVYIWNLQ-SKEIVQ 678
LWD + G + G + + S++G W +SGS D+ +W+ + + V+
Sbjct: 183 LWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVR 242
Query: 679 RLSGHTDTV 705
GH V
Sbjct: 243 TFHGHEGDV 251
Score = 27.5 bits (58), Expect = 9.6
Identities = 19/90 (21%), Positives = 36/90 (40%), Gaps = 8/90 (8%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK-------CLK 164
+W A + I + A+S + + + D ++ LSS +
Sbjct: 91 VWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSR 150
Query: 165 TLKGHSNYVFCCNFNPQSNL-IVSGSFDES 251
L GH YV CC + P + +++ S D++
Sbjct: 151 MLTGHRGYVSCCQYVPNEDAHLITSSGDQT 180
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/77 (27%), Positives = 40/77 (51%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
K++ G+F+ I+ + I +A++ L+ +A DD+ +K+ G ++ LKGH
Sbjct: 87 KLYKFPSGEFQTNITRFTLPIRVLAFNGSGSLLAAAGDDEGIKLINTFDGSIVRVLKGHK 146
Query: 183 NYVFCCNFNPQSNLIVS 233
V +F+P L+ S
Sbjct: 147 GPVTGLDFHPNGELLAS 163
Score = 37.9 bits (84), Expect = 0.007
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKG 176
K+ +DG + + GHK ++ + + + L+ S T+ WEL +G TLKG
Sbjct: 129 KLINTFDGSIVRVLKGHKGPVTGLDFHPNGELLASIDTTGTVLCWELQNGVVSFTLKG 186
Score = 32.7 bits (71), Expect = 0.26
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Frame = +2
Query: 275 GKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ---CLKTLIDDDNPPV 445
G ++ L H PV+ + F+ +G L+ S G W+ +G LK + D
Sbjct: 136 GSIVRVLKGHKGPVTGLDFHPNGELLASIDTTGTVLCWELQNGVVSFTLKGVAPDTGFNT 195
Query: 446 SFV---KFSPNGKYILAATLDN 502
S V ++SP+G+ + L N
Sbjct: 196 SIVNIPRWSPDGRTLAVPGLRN 217
Score = 31.9 bits (69), Expect = 0.45
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +2
Query: 302 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 481
H D V+++ + D +L+ S S D +++ SG+ +T I P+ + F+ +G +
Sbjct: 61 HQDGVTSLALSNDSTLLASGSIDHCVKLYKFPSGE-FQTNITRFTLPIRVLAFNGSGSLL 119
Query: 482 LAA 490
AA
Sbjct: 120 AAA 122
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +2
Query: 383 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD-NTLNYGTIAEENV*RH 547
++D +G+ L L D + ++ ++PNGKYI + LD L + ++++ RH
Sbjct: 221 MYDRFTGEKLFALRGDHLEAICYLTWAPNGKYIATSGLDKQVLLWDVDKKQDIDRH 276
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 43.6 bits (98), Expect = 1e-04
Identities = 28/83 (33%), Positives = 47/83 (56%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSN 185
+W +G+ +T+ GH+M ++ VA D+ IVS+S D+TLK W +G+ +++ H +
Sbjct: 97 VWNLMNGENIQTLKGHQMQVTGVA--IDNEDIVSSSVDQTLKRWR--NGQLVESWDAHQS 152
Query: 186 YVFCCNFNPQSNLIVSGSFDESV 254
+ P L VSGS D S+
Sbjct: 153 PIQAVIRLPSGEL-VSGSSDASL 174
Score = 37.1 bits (82), Expect = 0.012
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Frame = +3
Query: 33 EKTISGHKMGISDVAWSSDSR-----LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFC 197
EK + GH + +AW + +VS S D + VW L +G+ ++TLKGH V
Sbjct: 59 EKILLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTG 118
Query: 198 CNFNPQSNLIVSGSFDESV 254
+ + IVS S D+++
Sbjct: 119 VAIDNED--IVSSSVDQTL 135
Score = 36.7 bits (81), Expect = 0.016
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +1
Query: 613 IVSGSEDNLVYIWNLQSKEIVQRLSGH 693
+VSGS D V++WNL + E +Q L GH
Sbjct: 86 LVSGSMDTFVFVWNLMNGENIQTLKGH 112
Score = 35.1 bits (77), Expect = 0.048
Identities = 26/82 (31%), Positives = 42/82 (51%)
Frame = +1
Query: 481 IGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ 660
+ V Q + W G+ ++++ H++ I A + G+ +VSGS D + +W +
Sbjct: 127 VSSSVDQTLKRW--RNGQLVESWDAHQSP---IQAVIRLPSGE-LVSGSSDASLKLW--K 178
Query: 661 SKEIVQRLSGHTDTVLCTACHP 726
K +Q LSGHTDTV A P
Sbjct: 179 GKTSLQTLSGHTDTVRGLAVMP 200
Score = 32.7 bits (71), Expect = 0.26
Identities = 23/79 (29%), Positives = 42/79 (53%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
++W A G+ + GH + V S S LIVSAS+D+ K+W+ G C+++L+ H
Sbjct: 214 RLW-ALSGEVLLEMVGHTSLVYSVDAHS-SGLIVSASEDRHAKIWK--DGVCVQSLE-HP 268
Query: 183 NYVFCCNFNPQSNLIVSGS 239
++ F +++ + S
Sbjct: 269 GCIWDAKFLETGDIVTACS 287
Score = 27.9 bits (59), Expect = 7.3
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Frame = +3
Query: 27 KFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELS-SGK----CLKTLKGHSNYV 191
K + GH + + +D I ++S D+T++VW L S K K L GH+++V
Sbjct: 11 KLRCELHGHDDDVRGICVCNDEN-IATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSFV 69
Query: 192 FCCNFNPQSN-----LIVSGSFDESV 254
+ P ++ +VSGS D V
Sbjct: 70 GPLAWIPPTDEYPEGRLVSGSMDTFV 95
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 43.6 bits (98), Expect = 1e-04
Identities = 28/83 (33%), Positives = 47/83 (56%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSN 185
+W +G+ +T+ GH+M ++ VA D+ IVS+S D+TLK W +G+ +++ H +
Sbjct: 97 VWNLMNGENIQTLKGHQMQVTGVA--IDNEDIVSSSVDQTLKRWR--NGQLVESWDAHQS 152
Query: 186 YVFCCNFNPQSNLIVSGSFDESV 254
+ P L VSGS D S+
Sbjct: 153 PIQAVIRLPSGEL-VSGSSDASL 174
Score = 37.1 bits (82), Expect = 0.012
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Frame = +3
Query: 33 EKTISGHKMGISDVAWSSDSR-----LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFC 197
EK + GH + +AW + +VS S D + VW L +G+ ++TLKGH V
Sbjct: 59 EKILLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTG 118
Query: 198 CNFNPQSNLIVSGSFDESV 254
+ + IVS S D+++
Sbjct: 119 VAIDNED--IVSSSVDQTL 135
Score = 36.7 bits (81), Expect = 0.016
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +1
Query: 613 IVSGSEDNLVYIWNLQSKEIVQRLSGH 693
+VSGS D V++WNL + E +Q L GH
Sbjct: 86 LVSGSMDTFVFVWNLMNGENIQTLKGH 112
Score = 35.1 bits (77), Expect = 0.048
Identities = 26/82 (31%), Positives = 42/82 (51%)
Frame = +1
Query: 481 IGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ 660
+ V Q + W G+ ++++ H++ I A + G+ +VSGS D + +W +
Sbjct: 127 VSSSVDQTLKRW--RNGQLVESWDAHQSP---IQAVIRLPSGE-LVSGSSDASLKLW--K 178
Query: 661 SKEIVQRLSGHTDTVLCTACHP 726
K +Q LSGHTDTV A P
Sbjct: 179 GKTSLQTLSGHTDTVRGLAVMP 200
Score = 32.7 bits (71), Expect = 0.26
Identities = 23/79 (29%), Positives = 42/79 (53%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
++W A G+ + GH + V S S LIVSAS+D+ K+W+ G C+++L+ H
Sbjct: 214 RLW-ALSGEVLLEMVGHTSLVYSVDAHS-SGLIVSASEDRHAKIWK--DGVCVQSLE-HP 268
Query: 183 NYVFCCNFNPQSNLIVSGS 239
++ F +++ + S
Sbjct: 269 GCIWDAKFLETGDIVTACS 287
Score = 27.9 bits (59), Expect = 7.3
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Frame = +3
Query: 27 KFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELS-SGK----CLKTLKGHSNYV 191
K + GH + + +D I ++S D+T++VW L S K K L GH+++V
Sbjct: 11 KLRCELHGHDDDVRGICVCNDEN-IATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSFV 69
Query: 192 FCCNFNPQSN-----LIVSGSFDESV 254
+ P ++ +VSGS D V
Sbjct: 70 GPLAWIPPTDEYPEGRLVSGSMDTFV 95
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +3
Query: 45 SGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNL 224
SGHK +S V + S++ L SAS D TL++W++ ++T +GH+N S
Sbjct: 546 SGHKKAVSYVKFLSNNEL-ASASTDSTLRLWDVKDNLPVRTFRGHTNEKNFVGLTVNSEY 604
Query: 225 IVSGS 239
+ GS
Sbjct: 605 LACGS 609
Score = 37.9 bits (84), Expect = 0.007
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 433
+WDV T + L H +V F+R + S++VS S D ++W T Q + D
Sbjct: 447 VWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTR--QEASVINIDM 504
Query: 434 NPPVSFVKFSP-NGKYILAATLDNTLNY 514
+ VK++P + YI + D+ ++Y
Sbjct: 505 KANICCVKYNPGSSNYIAVGSADHHIHY 532
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/62 (33%), Positives = 35/62 (56%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLS 687
+LWD ++T+ GH NEK F +V +++ GSE N VY+++ KEI + ++
Sbjct: 573 RLWDVKDNLPVRTFRGHTNEKN--FVGLTV-NSEYLACGSETNEVYVYH---KEITRPVT 626
Query: 688 GH 693
H
Sbjct: 627 SH 628
Score = 34.7 bits (76), Expect = 0.064
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Frame = +3
Query: 75 AWSSD-SR----LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSG 236
AWS D SR ++VS SDD +KVW + + +N + C +NP SN I G
Sbjct: 466 AWSVDFSRTEPSMLVSGSDDCKVKVWCTRQEASVINIDMKAN-ICCVKYNPGSSNYIAVG 524
Query: 237 SFDESVGY 260
S D + Y
Sbjct: 525 SADHHIHY 532
Score = 31.1 bits (67), Expect = 0.78
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1
Query: 511 LWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 651
+WD + + L Y H+ + + +FS T +VSGS+D V +W
Sbjct: 447 VWDVTTRQSLMEYEEHEKRAWSV--DFSRTEPSMLVSGSDDCKVKVW 491
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/68 (30%), Positives = 40/68 (58%)
Frame = +3
Query: 51 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 230
H +S ++ + + L+ SAS D+T+KVW ++ KCL+++ H + V ++ ++
Sbjct: 205 HADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSVVSTTEA-IVF 263
Query: 231 SGSFDESV 254
SGS D +V
Sbjct: 264 SGSADGTV 271
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW--DTASGQCLKTL--- 421
+W + KCL+ +PAH D V++V + +++ S S DG + W D TL
Sbjct: 232 VWRIADSKCLESIPAHDDAVNSV-VSTTEAIVFSGSADGTVKAWKRDQQGKYTKHTLMQT 290
Query: 422 IDDDNPPVSFVKFSPNGKYILAATLDNTLNY 514
+ V+ + S NG + + D +N+
Sbjct: 291 LTKQESAVTALAVSKNGAAVYFGSSDGLVNF 321
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/69 (27%), Positives = 36/69 (52%)
Frame = +2
Query: 302 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 481
H+D VS + N + L+ S+S+D ++W A +CL+++ D+ S V S +
Sbjct: 205 HADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSVV--STTEAIV 262
Query: 482 LAATLDNTL 508
+ + D T+
Sbjct: 263 FSGSADGTV 271
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 42 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG--KCLKTLKGHSNYVFC 197
+ GHK+ + + L+ S S DKT+ VW+ CL L GH+ V C
Sbjct: 334 LKGHKLAV--LCLEVAGSLVFSGSADKTICVWKRDGNIHTCLSVLTGHTGPVKC 385
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Frame = +3
Query: 33 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKC-LKTLKGHSNYVFCCNFN 209
+K + HK ++ V++++D +++S SDD+ + +W+ + L GH N +F F
Sbjct: 48 DKKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFM 107
Query: 210 PQSN--LIVSGSFDESVGYG-M*EQGNV 284
P S+ IV+ + D+ V Y + E G V
Sbjct: 108 PFSDDRTIVTSAADKQVRYSKILESGQV 135
Score = 35.9 bits (79), Expect = 0.028
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = +1
Query: 541 KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTAC 720
+ Y H N + NF +++VSGS+ ++IW + E+++ + V C
Sbjct: 301 QVYKEHTNRETVKGVNFFGPKCEYVVSGSDCGRIFIWRKKDGELLRAMEADRHVVNCIES 360
Query: 721 HP 726
HP
Sbjct: 361 HP 362
Score = 35.1 bits (77), Expect = 0.048
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 2/83 (2%)
Frame = +2
Query: 287 KPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 466
K L H V+ V FN DG +++S S D +WD + + + KF P
Sbjct: 49 KKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMP 108
Query: 467 --NGKYILAATLDNTLNYGTIAE 529
+ + I+ + D + Y I E
Sbjct: 109 FSDDRTIVTSAADKQVRYSKILE 131
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +3
Query: 48 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 227
GH ++ ++ S I S S D ++++WE+ +G+CLK + + C +NP S L
Sbjct: 421 GHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQ-FDEAIMCVAWNPLSRLP 479
Query: 228 V 230
V
Sbjct: 480 V 480
Score = 37.5 bits (83), Expect = 0.009
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 281 CLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 415
C H+ V+++ + G I S S DG R+W+ +G+CLK
Sbjct: 415 CYLEYKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLK 459
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +1
Query: 535 CLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCT 714
C Y GH I + S G+WI SGS D V +W +++ + ++ + ++C
Sbjct: 415 CYLEYKGHTGAVTSISTDSS---GEWIASGSTDGSVRMWEVETGRCL-KVWQFDEAIMCV 470
Query: 715 ACHP 726
A +P
Sbjct: 471 AWNP 474
Score = 28.3 bits (60), Expect = 5.5
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 11/84 (13%)
Frame = +3
Query: 36 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVW------ELSSGKC---LKTLKGHSNY 188
KT+ H I++VA L S S+D T V+ +L+ L+ L+GHS+
Sbjct: 665 KTLKNHPKDITNVAVHRSYPLFASCSEDSTAYVFHGMVYNDLNQNPLIVPLEILRGHSSK 724
Query: 189 --VFCCNFNPQSNLIVSGSFDESV 254
V C F+P+ + + D +
Sbjct: 725 GGVLDCKFHPRQPWLFTAGADSII 748
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/83 (28%), Positives = 36/83 (43%)
Frame = +3
Query: 12 GAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYV 191
GA K H + AW D + S DK K+W L SG T+ H +
Sbjct: 58 GASLASAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPI 117
Query: 192 FCCNFNPQSNLIVSGSFDESVGY 260
+ P NL+ +GS+D+++ Y
Sbjct: 118 AAMAWIPGMNLLATGSWDKTLKY 140
Score = 35.9 bits (79), Expect = 0.028
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWE 140
K+W G T++ H+ I+ +AW L+ + S DKTLK W+
Sbjct: 97 KMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWD 142
Score = 35.5 bits (78), Expect = 0.036
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
Frame = +2
Query: 260 WDV-RTGKCLKPLP----AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 424
W++ R+G L P +H PV + DG+ + S D ++W SG T+
Sbjct: 52 WEISRSGASLASAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVA 111
Query: 425 DDDNPPVSFVKFSPNGKYILAATLDNTLNYGTIAEEN 535
+ P++ + + P + + D TL Y ++N
Sbjct: 112 MHEG-PIAAMAWIPGMNLLATGSWDKTLKYWDTRQQN 147
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Frame = +2
Query: 278 KCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD-TASGQCL----KTLIDDDNP 439
K + P+ +D +S++ F+ ++V++S+D R W+ + SG L K I D P
Sbjct: 16 KSYEVTPSPADSISSLSFSPRADILVATSWDNQVRCWEISRSGASLASAPKASISHDQP 74
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 42.7 bits (96), Expect = 2e-04
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Frame = +3
Query: 33 EKTISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWEL---SSGKCLKTLKGHSNYVFCC 200
++ H+ + DVAW L S DD+ L +W+L S+ K ++++ HS V C
Sbjct: 220 QQIFKAHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCL 279
Query: 201 NFNPQSNLIV-SGSFDESV 254
FNP + +V +GS D++V
Sbjct: 280 AFNPFNEWVVATGSTDKTV 298
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +3
Query: 30 FEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFN 209
F + GHK + + WS D R + S +D L VW S + + L H+ V ++
Sbjct: 290 FVSKLVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWS 349
Query: 210 P-QSNLIVSG 236
P QS+L+ SG
Sbjct: 350 PHQSSLLASG 359
Score = 36.7 bits (81), Expect = 0.016
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSAS--DDKTLKVWELSSGKCLKTLKG 176
+ W +G +I + ++AWS + IVS + +W+ S + TL G
Sbjct: 368 RFWNTTNGNQLNSIDTGSQ-VCNLAWSKNVNEIVSTHGYSQNQIMLWKYPSMSKVATLTG 426
Query: 177 HSNYVFCCNFNPQSNLIVSGSFDESVGY 260
HS V +P IV+G+ DE++ +
Sbjct: 427 HSMRVLYLATSPDGQTIVTGAGDETLRF 454
Score = 33.5 bits (73), Expect = 0.15
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +3
Query: 39 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL 143
T++GH M + +A S D + IV+ + D+TL+ W +
Sbjct: 423 TLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNV 457
Score = 33.1 bits (72), Expect = 0.19
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 IWGAYDGKFEKTIS-GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
+W A + K K G + V W+ + I + ++VW+ + K ++T+ GH
Sbjct: 198 LWTASNSKVTKLCDLGPNDSVCSVQWTREGSYISIGTSHGQVQVWDGTQCKRVRTMGGHQ 257
Query: 183 NYVFCCNFNPQSNLIVSGSFDESV 254
+N S ++ SGS D ++
Sbjct: 258 TRTGVLAWN--SRILSSGSRDRNI 279
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/85 (22%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELS-SGKCLKTLKGH 179
++W K +T+ GH+ +AW +SR++ S S D+ + ++ + L GH
Sbjct: 240 QVWDGTQCKRVRTMGGHQTRTGVLAW--NSRILSSGSRDRNILQHDIRVQSDFVSKLVGH 297
Query: 180 SNYVFCCNFNPQSNLIVSGSFDESV 254
+ V ++ + SG D +
Sbjct: 298 KSEVCGLKWSHDDRELASGGNDNQL 322
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 613 IVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTACHP 726
+ SG DN + +WN S++ + +L+ HT V P
Sbjct: 313 LASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSP 350
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 254 WIWDVRTGKCLKPLP-AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 421
++W K K +D V +V + R+GS I + G ++WD + ++T+
Sbjct: 197 YLWTASNSKVTKLCDLGPNDSVCSVQWTREGSYISIGTSHGQVQVWDGTQCKRVRTM 253
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +3
Query: 51 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYV 191
H +S ++ + + L+ S S DKTLKVW LS KCL++++ H + +
Sbjct: 248 HYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAHDDAI 294
Score = 36.3 bits (80), Expect = 0.021
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 6/92 (6%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELS-SGKCLK----- 164
K+W D K ++I H I+ VA D L+ + S D TLKVW+ GK K
Sbjct: 274 KVWRLSDSKCLESIQAHDDAINTVAAGFDD-LLFTGSADGTLKVWKRELQGKGTKHFLVN 332
Query: 165 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVGY 260
L N V N + ++ GS D +V +
Sbjct: 333 VLMKQENAVTALAVNITAAVVYCGSSDGTVNF 364
Score = 35.1 bits (77), Expect = 0.048
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 388
+W + KCL+ + AH D ++ V D L+ + S DG ++W
Sbjct: 275 VWRLSDSKCLESIQAHDDAINTVAAGFD-DLLFTGSADGTLKVW 317
Score = 33.5 bits (73), Expect = 0.15
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +2
Query: 302 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
H D VS + N + L+ S S+D ++W + +CL+++ D+
Sbjct: 248 HYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAHDD 292
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 8/57 (14%)
Frame = +3
Query: 39 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWE--------LSSGKCLKTLKGHSN 185
T++GH+ +S V + DS IVSAS D +LK+W LS G C T KGH+N
Sbjct: 889 TLAGHEKAVSYVKFM-DSETIVSASTDNSLKLWNLNKTNSSGLSPGACSLTYKGHTN 944
Score = 41.5 bits (93), Expect = 6e-04
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKGH 179
+IW A G+ + H+ V +S SD VS SDD ++K+W ++ + L T+
Sbjct: 791 QIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWSINEKRSLGTIWSP 850
Query: 180 SNYVFCCNFNPQSN-LIVSGSFDESV 254
+N V C F+ SN L+ GS D V
Sbjct: 851 AN-VCCVQFSSYSNHLLAFGSADYKV 875
Score = 36.3 bits (80), Expect = 0.021
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSK 666
Q+WD G+ YT H+ + + +FS + VSGS+D V +W++ K
Sbjct: 791 QIWDAGTGQGFSQYTEHQKRAWSV--DFSPSDPTKFVSGSDDCSVKLWSINEK 841
Score = 33.9 bits (74), Expect = 0.11
Identities = 20/41 (48%), Positives = 22/41 (53%)
Frame = +1
Query: 523 SRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 645
S G C TY GH N+K F SV G +I GSE N VY
Sbjct: 931 SPGACSLTYKGHTNQKN--FVGLSVLDG-YIACGSETNEVY 968
Score = 32.7 bits (71), Expect = 0.26
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +3
Query: 51 HKMGISDVAWSSDSRLIVSASD-DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NL 224
+K +S V W+S + ++++D D +++W+ +G+ H + +F+P
Sbjct: 764 NKSKLSCVCWNSYIKNYLASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTK 823
Query: 225 IVSGSFDESV 254
VSGS D SV
Sbjct: 824 FVSGSDDCSV 833
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 350 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN 469
+ S+ YDG+ +IWD +GQ + S V FSP+
Sbjct: 781 LASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWS-VDFSPS 819
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Frame = +3
Query: 15 AYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK-----CLKTLKGH 179
A D + + GH+ + V+W++ L+ + DK++ +WE+ + + L GH
Sbjct: 79 ATDSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGH 138
Query: 180 SNYVFCCNFNPQSNLIVSGSFDESV 254
S V ++P +++ S S+D ++
Sbjct: 139 SEDVKMVLWHPTMDVLFSCSYDNTI 163
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Frame = +3
Query: 42 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVW----ELSSGKCLKTL----KGHSNYVFC 197
++GH + V W ++ S S D T+K+W E C++TL GHS+ V+
Sbjct: 135 LTGHSEDVKMVLWHPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWS 194
Query: 198 CNFNPQSNLIVSGSFDESV 254
+FN + +V+ S D +V
Sbjct: 195 ISFNAAGDKMVTCSDDLAV 213
Score = 33.1 bits (72), Expect = 0.19
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +3
Query: 42 ISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSS 149
+ GH + +VAW+ + +I S S DKT+++WE SS
Sbjct: 16 LEGHTDRVWNVAWNPAADGVIASCSADKTVRIWEQSS 52
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 9/70 (12%)
Frame = +2
Query: 254 WIWDVRTGK-----CLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW----DTASGQ 406
WIW+++ + + L HS+ V V ++ ++ S SYD +IW +
Sbjct: 117 WIWEIQPEEDDEFDTIAVLTGHSEDVKMVLWHPTMDVLFSCSYDNTIKIWCSEDEDGDYN 176
Query: 407 CLKTLIDDDN 436
C++TL + +N
Sbjct: 177 CVQTLSELNN 186
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +3
Query: 42 ISGHKMGISDVAWSS-DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 218
+ GH M + + +S D R++ S SDD + + + L ++ GH+++V + +P
Sbjct: 196 LEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDG 255
Query: 219 NLIVSGSFDESV 254
I +GS D +V
Sbjct: 256 GAIATGSSDRTV 267
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/58 (29%), Positives = 32/58 (55%)
Frame = +3
Query: 39 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 212
++SGH + V S D I + S D+T+++W+L ++T+ H++ V+ F P
Sbjct: 238 SMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAFRP 295
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/85 (27%), Positives = 39/85 (45%)
Frame = +1
Query: 472 KIYIGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 651
++ G H + D L + +GH + + + + S GG I +GS D V +W
Sbjct: 214 RVLFSGSDDGHVNMHDAEGKTLLGSMSGHTS--WVLSVDASPDGGA-IATGSSDRTVRLW 270
Query: 652 NLQSKEIVQRLSGHTDTVLCTACHP 726
+L+ + +Q +S H D V A P
Sbjct: 271 DLKMRAAIQTMSNHNDQVWSVAFRP 295
Score = 37.1 bits (82), Expect = 0.012
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +3
Query: 33 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 212
+KT S K + VAWS + + + S D T+ V+++ K L L+GH+ V F+P
Sbjct: 153 DKTSS--KKFVLSVAWSPNGKRLACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSP 210
Query: 213 -QSNLIVSGSFDESV 254
++ SGS D V
Sbjct: 211 VDPRVLFSGSDDGHV 225
Score = 36.3 bits (80), Expect = 0.021
Identities = 19/85 (22%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
K+W + +T +GH +G++ +A + S+S D ++V+++ + + L+
Sbjct: 43 KLWRPDELDLVRTNTGHSLGVAALAAHPSGIIAASSSIDSFVRVFDVDTNATIAVLEAPP 102
Query: 183 NYVFCCNFNPQSNLI-VSGSFDESV 254
+ V+ F P+ ++ V+G SV
Sbjct: 103 SEVWGMQFEPKGTILAVAGGSSASV 127
Score = 35.1 bits (77), Expect = 0.048
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 13/97 (13%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLI-VSSSYDGLCRIWDTASGQCLKTLI--- 424
++DV T + L A V + F G+++ V+ ++WDTAS + + TL
Sbjct: 86 VFDVDTNATIAVLEAPPSEVWGMQFEPKGTILAVAGGSSASVKLWDTASWRLISTLSIPR 145
Query: 425 -DDDNPP--------VSFVKFSPNGKYILAATLDNTL 508
D P V V +SPNGK + ++D T+
Sbjct: 146 PDAPKPSDKTSSKKFVLSVAWSPNGKRLACGSMDGTI 182
Score = 34.3 bits (75), Expect = 0.084
Identities = 21/72 (29%), Positives = 33/72 (45%)
Frame = +1
Query: 511 LWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSG 690
++D R K L GH + FS + + SGS+D V + + + K ++ +SG
Sbjct: 184 VFDVDRSKLLHQLEGHNMPVRSLV--FSPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMSG 241
Query: 691 HTDTVLCTACHP 726
HT VL P
Sbjct: 242 HTSWVLSVDASP 253
Score = 31.9 bits (69), Expect = 0.45
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +2
Query: 284 LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 463
L + H+ V +V + DG I + S D R+WD ++T+ + N V V F
Sbjct: 236 LGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTM-SNHNDQVWSVAFR 294
Query: 464 PNG 472
P G
Sbjct: 295 PPG 297
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +3
Query: 96 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 254
L+++ S D+T+K+W ++T GHS V +P + S S D V
Sbjct: 32 LLLTGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAHPSGIIAASSSIDSFV 84
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 613 IVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTACHPT 729
+++GS D V +W ++V+ +GH+ V A HP+
Sbjct: 33 LLTGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAHPS 71
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice sites
at introns 4 and 6
Length = 1017
Score = 42.3 bits (95), Expect = 3e-04
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRL-IVSASDDKTLKVWELSSGKCLKTLKGH 179
K+W G+ H+ V +S + S SDD ++K+W ++ CL T++
Sbjct: 779 KLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWNINERNCLGTIRNI 838
Query: 180 SNYVFCCNFNPQ-SNLIVSGSFD 245
+N V C F+PQ S+L+ GS D
Sbjct: 839 AN-VCCVQFSPQSSHLLAFGSSD 860
Score = 37.9 bits (84), Expect = 0.007
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRD-GSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 433
+WDV TG+ + H +V F+ + + S S D ++W+ CL T+ +
Sbjct: 780 LWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWNINERNCLGTIRNIA 839
Query: 434 NPPVSFVKFSPNGKYILA 487
N V V+FSP ++LA
Sbjct: 840 N--VCCVQFSPQSSHLLA 855
Score = 35.9 bits (79), Expect = 0.028
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Frame = +3
Query: 42 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWE--------LSSGKCLKTLKGHSNYVFC 197
+SGH +S A D+ +V+AS D TLK+W+ LS+ C T GH+N
Sbjct: 878 LSGHNKAVS-YAKFLDNETLVTASTDNTLKLWDLKKTTHGGLSTNACSLTFGGHTNEKNF 936
Query: 198 CNFNPQSNLIVSGS 239
+ I GS
Sbjct: 937 VGLSTSDGYIACGS 950
Score = 34.3 bits (75), Expect = 0.084
Identities = 37/132 (28%), Positives = 55/132 (41%), Gaps = 11/132 (8%)
Frame = +2
Query: 350 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN-TLNYGTIA 526
+ SS YDG+ ++WD +GQ + I+ + S V FS LA+ D+ ++ I
Sbjct: 769 LASSDYDGIVKLWDVTTGQAISHFIEHEKRAWS-VDFSEACPTKLASGSDDCSVKLWNIN 827
Query: 527 EENV*RHIRDTRTKNIVSLPTLVS--LA-GSG*Y-------RDQKTTWCTYGTFNQRRLY 676
E N IR+ V S LA GS + R+ +T WC N+ Y
Sbjct: 828 ERNCLGTIRNIANVCCVQFSPQSSHLLAFGSSDFRTYCYDLRNLRTPWCILSGHNKAVSY 887
Query: 677 RGCLDTRIQFSA 712
LD +A
Sbjct: 888 AKFLDNETLVTA 899
Score = 31.1 bits (67), Expect = 0.78
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 523 SRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 654
S C T+ GH NEK F S + G +I GSE N VY ++
Sbjct: 919 STNACSLTFGGHTNEKN--FVGLSTSDG-YIACGSETNEVYAYH 959
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 63 ISDVAWSSDSRLIVSASDDKTLKVWEL 143
+S V W S ++VSAS + ++KV +L
Sbjct: 990 VSSVCWRKRSNMVVSASSNGSIKVLQL 1016
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +3
Query: 48 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKC-LKTLKGHSNYVFCCNFNPQSNL 224
G+ GI V +S+D R +V+ S D ++ V++L + + L+T+ S+ C + NL
Sbjct: 227 GYSFGIFSVKFSTDGREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNL 286
Query: 225 IVSGSFD 245
I+SGS D
Sbjct: 287 ILSGSDD 293
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/57 (33%), Positives = 35/57 (61%)
Frame = +3
Query: 75 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 245
A S+ + I + S+D ++ +++L SG + LK HS+ V CN++P ++S S+D
Sbjct: 408 AHSTGQKYIYTGSNDSSVYIYDLVSGDKVAVLKHHSSPVRDCNWHPYYPTLISSSWD 464
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +1
Query: 538 LKTYTGHKNEKY---CIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVL 708
+ TY GH + C F+ TG K+I +GS D+ VYI++L S + V L H+ V
Sbjct: 388 VSTYKGHSVLRTLIRCYFSPAHSTGQKYIYTGSNDSSVYIYDLVSGDKVAVLKHHSSPVR 447
Query: 709 CTACHP 726
HP
Sbjct: 448 DCNWHP 453
Score = 37.1 bits (82), Expect = 0.012
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 254 WIWDVRTGKCLKPLPAHSDPVSAVHF-NRDGSLIVSSSYDGLCRIWD 391
+++D+ + AH+ V+ V F + G+LI+S S D LC++WD
Sbjct: 254 YVYDLEANRVSLRTVAHTSDVNTVCFADESGNLILSGSDDNLCKVWD 300
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +1
Query: 580 FANFSV---TGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 705
F FSV T G+ +V+GS D+ +Y+++L++ + R HT V
Sbjct: 230 FGIFSVKFSTDGREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDV 274
Score = 29.5 bits (63), Expect = 2.4
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +3
Query: 48 GHKMGISDVAWSSDSRLIVSASDDKTLKVWEL 143
GH G++ + D R +S D+T+K+W++
Sbjct: 316 GHLEGVTFIDSRGDGRYFISNGKDQTIKLWDI 347
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Frame = +3
Query: 51 HKMGISDVAWSSDS-RLIVSASDDKTLKVWE----LSSGKCLKTLKGHSNYVFCCNFNPQ 215
H ++ V ++ +S LI+S SDD KVW+ + K L GH V +
Sbjct: 270 HTSDVNTVCFADESGNLILSGSDDNLCKVWDRRCFIGRDKPAGVLVGHLEGVTFIDSRGD 329
Query: 216 SNLIVSGSFDESV 254
+S D+++
Sbjct: 330 GRYFISNGKDQTI 342
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +2
Query: 254 WIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 391
+I+D+ +G + L HS PV +++ ++SSS+DG W+
Sbjct: 426 YIYDLVSGDKVAVLKHHSSPVRDCNWHPYYPTLISSSWDGDLVKWE 471
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/78 (28%), Positives = 39/78 (50%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
I D TGK L+ L H D A ++ DG + + D CR+WD + T++ +
Sbjct: 303 IVDPNTGKTLETLSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDIRNLSQSVTVLKGNL 362
Query: 437 PPVSFVKFSPNGKYILAA 490
+ ++++ +GKY+ A
Sbjct: 363 GAIRSIRYTSDGKYMAMA 380
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/63 (23%), Positives = 34/63 (53%)
Frame = +3
Query: 63 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 242
++ + S D +L+ D+ + + ++GK L+TL GH ++ F ++P +G+
Sbjct: 280 VNHASLSPDGKLLAIVGDNPEGLIVDPNTGKTLETLSGHLDFSFASAWHPDGVTFSTGNQ 339
Query: 243 DES 251
D++
Sbjct: 340 DKT 342
Score = 33.1 bits (72), Expect = 0.19
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 24 GKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSS-GKCLKTLKGH 179
GK +T+SGH AW D + + DKT +VW++ + + + LKG+
Sbjct: 309 GKTLETLSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDIRNLSQSVTVLKGN 361
>At4g21530.1 68417.m03111 transducin family protein / WD-40 repeat
family protein contains 1 WD-40 repeat (PF00400);
similar to anaphase-promoting complex subunit 4
GI:6180011 [Homo sapiens]; supported by EST GB:AU237382
Length = 510
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +3
Query: 39 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF--NP 212
TIS K ++ + W D + I +D T+ + ++ +GK L+ LK H V C N+ +
Sbjct: 60 TISPGKP-VTSLCWRPDGKAIAVGLEDGTISLHDVENGKLLRNLKPHDVAVVCLNWEEDG 118
Query: 213 QSNLIVSGSF 242
QSN SG+F
Sbjct: 119 QSNTDESGNF 128
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 4/45 (8%)
Frame = +3
Query: 48 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSS----GKCLKTL 170
GHK I V+WS DS+ +++ S DK+ KVWE++ G +KTL
Sbjct: 94 GHKGSIYAVSWSPDSKRVLTVSADKSAKVWEVAEDGTIGSVIKTL 138
Score = 37.1 bits (82), Expect = 0.012
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +2
Query: 302 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF--VKFSPNGK 475
HS+ V+ + ++ DG+ ++ S D I+D +G + L +D S V +SP+ K
Sbjct: 50 HSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSK 109
Query: 476 YILAATLDNTLNYGTIAEE 532
+L + D + +AE+
Sbjct: 110 RVLTVSADKSAKVWEVAED 128
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSS-DSRLIVSASDDKTLKVWELSSGKCLKTLKGH 179
++W + + H+ + + +SS D L+ S SDD ++K+W ++ G + T+K
Sbjct: 559 QVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK 618
Query: 180 SNYVFCCNFNPQS-NLIVSGSFDESVGY 260
+N + C F ++ + GS D V Y
Sbjct: 619 AN-ICCVQFPSETGRSLAFGSADHKVYY 645
Score = 35.1 bits (77), Expect = 0.048
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Frame = +3
Query: 39 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELS---SG---KCLKTLKGHSNYVFCC 200
T+ GH +S V + DS +VS+S D TLK+W+LS SG L + GH+N
Sbjct: 657 TMIGHHKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFV 715
Query: 201 NFNPQSNLIVSGS 239
+ I +GS
Sbjct: 716 GLSVSDGYIATGS 728
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Frame = +1
Query: 469 WKIYIGGDVRQHT-----QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 633
W YI V Q+WD +R + + H+ + I ++S + SGS+D
Sbjct: 541 WNSYIKSQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSI--DYSSADPTLLASGSDD 598
Query: 634 NLVYIWNL 657
V +W++
Sbjct: 599 GSVKLWSI 606
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 254 WIWDVRTGKC-LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 391
+ +D+R K L + H VS V F D S +VSSS D ++WD
Sbjct: 644 YYYDLRNPKLPLCTMIGHHKTVSYVRFV-DSSTLVSSSTDNTLKLWD 689
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSS-DSRLIVSASDDKTLKVWELSSGKCLKTLKGH 179
++W + + H+ + + +SS D L+ S SDD ++K+W ++ G + T+K
Sbjct: 559 QVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK 618
Query: 180 SNYVFCCNFNPQS-NLIVSGSFDESVGY 260
+N + C F ++ + GS D V Y
Sbjct: 619 AN-ICCVQFPSETGRSLAFGSADHKVYY 645
Score = 35.1 bits (77), Expect = 0.048
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Frame = +3
Query: 39 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELS---SG---KCLKTLKGHSNYVFCC 200
T+ GH +S V + DS +VS+S D TLK+W+LS SG L + GH+N
Sbjct: 657 TMIGHHKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFV 715
Query: 201 NFNPQSNLIVSGS 239
+ I +GS
Sbjct: 716 GLSVSDGYIATGS 728
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Frame = +1
Query: 469 WKIYIGGDVRQHT-----QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 633
W YI V Q+WD +R + + H+ + I ++S + SGS+D
Sbjct: 541 WNSYIKSQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSI--DYSSADPTLLASGSDD 598
Query: 634 NLVYIWNL 657
V +W++
Sbjct: 599 GSVKLWSI 606
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 254 WIWDVRTGKC-LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 391
+ +D+R K L + H VS V F D S +VSSS D ++WD
Sbjct: 644 YYYDLRNPKLPLCTMIGHHKTVSYVRFV-DSSTLVSSSTDNTLKLWD 689
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +3
Query: 12 GAYDGKFEKTISGHKMGISDVAWSSDSR--LIVSASDDKTLKVWELSSGKCLKTLKGHSN 185
G D + I H ++D+A+S ++ +V+ +DKT+KVW+ +G L T +GH
Sbjct: 450 GGEDLRNHLEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEA 509
Query: 186 YVF 194
V+
Sbjct: 510 PVY 512
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +3
Query: 87 DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 254
D+ +I DD +++++ + + LKGH V F+ N++VS D +
Sbjct: 898 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQL 953
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKV-----WELSSGKCLKT 167
+I+ + + + GH+ ++ +A+S+ ++VS+ D L V WE + K ++
Sbjct: 912 QIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWSMDGWEKQASKQIQI 971
Query: 168 LKGHS 182
GHS
Sbjct: 972 PSGHS 976
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +3
Query: 12 GAYDGKFEKTISGHKMGISDVAWSSDSR--LIVSASDDKTLKVWELSSGKCLKTLKGHSN 185
G D + I H ++D+A+S ++ +V+ +DKT+KVW+ +G L T +GH
Sbjct: 450 GGEDLRNHLEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEA 509
Query: 186 YVF 194
V+
Sbjct: 510 PVY 512
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +3
Query: 87 DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 254
D+ +I DD +++++ + + LKGH V F+ N++VS D +
Sbjct: 898 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQL 953
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKV-----WELSSGKCLKT 167
+I+ + + + GH+ ++ +A+S+ ++VS+ D L V WE + K ++
Sbjct: 912 QIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWSMDGWEKQASKQIQI 971
Query: 168 LKGHS 182
GHS
Sbjct: 972 PSGHS 976
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 41.1 bits (92), Expect = 7e-04
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +3
Query: 51 HKMGISDVAWSSDSRLIVSASDDKTLKVWE 140
H+ ++D+A SSD VSASDD T+KVW+
Sbjct: 1080 HRSAVNDIATSSDHSFFVSASDDSTVKVWD 1109
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +2
Query: 248 ECWIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQCLKTLI 424
EC + D +GK + L H D + ++ +G ++ + + D CR+WD + Q LK L
Sbjct: 300 ECLLADTGSGKVIHGLEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKVL- 358
Query: 425 DDDNPPVSFVKFSPNGKYILAA 490
+ + ++F+ +G+++ A
Sbjct: 359 KGNMGAIRALRFTSDGRFLAMA 380
Score = 37.9 bits (84), Expect = 0.007
Identities = 15/61 (24%), Positives = 33/61 (54%)
Frame = +3
Query: 63 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 242
+++++ S D +L+ D + + SGK + L+GH +Y F ++P ++ +G+
Sbjct: 280 VNNISTSPDGKLVAVLGDSPECLLADTGSGKVIHGLEGHLDYSFSSAWHPNGQILATGNQ 339
Query: 243 D 245
D
Sbjct: 340 D 340
Score = 32.3 bits (70), Expect = 0.34
Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +3
Query: 24 GKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSS-GKCLKTLKGHSNYVFCC 200
GK + GH AW + +++ + + D T ++W++ + + LK LKG+ +
Sbjct: 309 GKVIHGLEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKVLKGNMGAIRAL 368
Query: 201 NFNPQSNLI 227
F +
Sbjct: 369 RFTSDGRFL 377
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/69 (27%), Positives = 40/69 (57%)
Frame = +2
Query: 302 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 481
H D VS++ ++DGSL+ S+S+D +IW T+ +CL ++ + ++ + S +G ++
Sbjct: 191 HVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVSKDG-FV 249
Query: 482 LAATLDNTL 508
+ D +
Sbjct: 250 YTGSADKKI 258
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +3
Query: 51 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL-KGHSNYVFCCNFNPQSNLI 227
H +S +A S D L+ SAS D++ K+W S KCL ++ K H + + + + +
Sbjct: 191 HVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVS-KDGFV 249
Query: 228 VSGSFDESV 254
+GS D+ +
Sbjct: 250 YTGSADKKI 258
Score = 35.1 bits (77), Expect = 0.048
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Frame = +3
Query: 42 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVW-----ELSSGKCLKTLKGHSNYV 191
+ GH+ I +A +SD L++S S DK+L+VW E CL L+GH+ V
Sbjct: 324 LRGHRKAIMCLAVASD--LVLSGSADKSLRVWRRGLMEKEGYSCLAVLEGHTKPV 376
Score = 33.1 bits (72), Expect = 0.19
Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +2
Query: 257 IWDVRTGKCLKPLP-AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ-CLKTLIDD 430
IW KCL + AH D ++A+ ++DG + + S D ++W+ + L +
Sbjct: 218 IWRTSDFKCLDSIEKAHDDAINAIVVSKDG-FVYTGSADKKIKVWNKKDKKHSLVATLTK 276
Query: 431 DNPPVSFVKFSPNGKYILAATLDNTL 508
V+ + S +GK + + D ++
Sbjct: 277 HLSAVNALAISEDGKVLYSGACDRSI 302
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/89 (24%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Frame = +2
Query: 257 IWDVRTGKCLKP--LPAH--SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 424
++DV T +C P P S ++ V ++ GS+ +++S DG R++D S +C++++
Sbjct: 154 LYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIG 213
Query: 425 D-DDNPPVSFVKFSPNGKYILAATLDNTL 508
+ V+ F+ + +++L++ D+T+
Sbjct: 214 NAHGKSEVTSAVFTKDQRFVLSSGKDSTV 242
Score = 37.1 bits (82), Expect = 0.012
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +3
Query: 54 KMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKG 176
K ++ ++ D R ++S+ D T+K+WE+ SG+ +K G
Sbjct: 218 KSEVTSAVFTKDQRFVLSSGKDSTVKLWEIGSGRMVKEYLG 258
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/86 (20%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Frame = +3
Query: 36 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK-----------CLKTLKGHS 182
KT+S HK + +S D + D ++K++E+ K ++T H+
Sbjct: 25 KTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTFYDHA 84
Query: 183 NYVFCCNFNPQSNLIVSGSFDESVGY 260
+ +F+P+S +++S + D + +
Sbjct: 85 EPINDLDFHPRSTILISSAKDNCIKF 110
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/89 (24%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Frame = +2
Query: 257 IWDVRTGKCLKP--LPAH--SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 424
++DV T +C P P S ++ V ++ GS+ +++S DG R++D S +C++++
Sbjct: 246 LYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIG 305
Query: 425 D-DDNPPVSFVKFSPNGKYILAATLDNTL 508
+ V+ F+ + +++L++ D+T+
Sbjct: 306 NAHGKSEVTSAVFTKDQRFVLSSGKDSTV 334
Score = 37.1 bits (82), Expect = 0.012
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +3
Query: 54 KMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKG 176
K ++ ++ D R ++S+ D T+K+WE+ SG+ +K G
Sbjct: 310 KSEVTSAVFTKDQRFVLSSGKDSTVKLWEIGSGRMVKEYLG 350
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/86 (20%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Frame = +3
Query: 36 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK-----------CLKTLKGHS 182
KT+S HK + +S D + D ++K++E+ K ++T H+
Sbjct: 117 KTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTFYDHA 176
Query: 183 NYVFCCNFNPQSNLIVSGSFDESVGY 260
+ +F+P+S +++S + D + +
Sbjct: 177 EPINDLDFHPRSTILISSAKDNCIKF 202
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +3
Query: 42 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK 173
+ GH+ +S +A S S + + S D+TL+VW+ +SG+C LK
Sbjct: 147 LDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCTGVLK 190
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = +3
Query: 39 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYV 191
+++GH + + V + + S S DKT+KVW L + +C++TL HS+ V
Sbjct: 269 SLTGHTLAV--VTLYVGANRLYSGSMDKTIKVWSLDNLQCIQTLTDHSSVV 317
Score = 34.3 bits (75), Expect = 0.084
Identities = 22/88 (25%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Frame = +2
Query: 254 WIWDVRTGKCLKP---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 424
W ++ T C +P L H+ V ++ + + S S D ++W + QC++TL
Sbjct: 255 WRYNAATN-CFEPSASLTGHTLAVVTLYVG--ANRLYSGSMDKTIKVWSLDNLQCIQTLT 311
Query: 425 DDDNPPVSFVKFSPNGKYILAATLDNTL 508
D + +S + + +++L+ +LDNT+
Sbjct: 312 DHSSVVMSLICWD---QFLLSCSLDNTV 336
Score = 33.5 bits (73), Expect = 0.15
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +1
Query: 601 GGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTAC 720
G + SGS D + +W+L + + +Q L+ H+ V+ C
Sbjct: 283 GANRLYSGSMDKTIKVWSLDNLQCIQTLTDHSSVVMSLIC 322
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +2
Query: 284 LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 421
L L H VS + + + S D R+WD ASGQC L
Sbjct: 144 LTQLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCTGVL 189
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +3
Query: 48 GHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNL 224
GH+ I DVAW + + SA DD L +W+L + + +K H + +FNP +
Sbjct: 216 GHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTNQMQHQVKVHEREINYLSFNPFNEW 275
Query: 225 IVSGSFDES 251
+++ + +S
Sbjct: 276 VLATASSDS 284
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Frame = +3
Query: 15 AYDGKFEKTIS--GHKMGISDVAWSSDSRLIVSA-SDDKTLKVWELS 146
A DG E S GHK ISD AW+ D ++S+ ++D +L+VW+++
Sbjct: 349 AEDGPPELLFSHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMA 395
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/80 (21%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKTLIDDD 433
IWD+RT + + H ++ + FN ++ ++S D ++D ++
Sbjct: 245 IWDLRTNQMQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHVLSKH 304
Query: 434 NPPVSFVKFSPNGKYILAAT 493
V V++ PN + +LA++
Sbjct: 305 EGEVFQVEWDPNHETVLASS 324
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +1
Query: 532 KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLC 711
K L + GH E C F+V GG+ + SGS D + +W+L + + + L HT TV
Sbjct: 249 KYLTSLEGHSGEVTC----FAV-GGQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTS 303
Query: 712 TAC 720
C
Sbjct: 304 LLC 306
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/55 (30%), Positives = 35/55 (63%)
Frame = +3
Query: 27 KFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYV 191
K+ ++ GH ++ ++ +++ S S DKT+K+W+L++ +C+ TLK H+ V
Sbjct: 249 KYLTSLEGHSGEVT--CFAVGGQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTV 301
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +3
Query: 9 WGAYDG-KFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL 170
W + G ++ GH + +A S + S S D TL+VW+ +SG+C+ ++
Sbjct: 115 WSCFPGLAMVASLEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQCVHSI 169
Score = 36.3 bits (80), Expect = 0.021
Identities = 24/95 (25%), Positives = 44/95 (46%)
Frame = +2
Query: 278 KCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 457
K L L HS V+ F G ++ S S D ++WD + QC+ TL S +
Sbjct: 249 KYLTSLEGHSGEVTC--FAVGGQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSLLC 306
Query: 458 FSPNGKYILAATLDNTLNYGTIAEENV*RHIRDTR 562
+ K +++++LD T+ +E + + ++ R
Sbjct: 307 WD---KCLISSSLDGTIKVWAYSENGILKVVQTRR 338
Score = 33.1 bits (72), Expect = 0.19
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 293 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 421
L H+ + + + S S DG R+WD SGQC+ ++
Sbjct: 127 LEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQCVHSI 169
Score = 32.3 bits (70), Expect = 0.34
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 421
+WD+ T +C+ L H+ V+++ D LI SSS DG ++W + LK +
Sbjct: 282 MWDLNTLQCIMTLKQHTGTVTSL-LCWDKCLI-SSSLDGTIKVWAYSENGILKVV 334
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +3
Query: 36 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKC-LKTLKGHSNYVFCCNFNP 212
K + HK ++ V+++++ +++S SDD+ + +W+ G L GH+N VF F P
Sbjct: 53 KKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFHSGHANNVFQAKFMP 112
Query: 213 QSN 221
S+
Sbjct: 113 FSD 115
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +1
Query: 547 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTACHP 726
Y GHKN + NF +++VSGS+ ++IW + E+++ + V C HP
Sbjct: 327 YKGHKNCETVKGVNFFGPRSEYVVSGSDCGRIFIWRKKGGELIRVMEADRHVVNCIEPHP 386
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Frame = +1
Query: 469 WKIYIGG-DVRQHTQLWDYSRGKCLKTYTGHKNEKY--CIFANFSVTGGKWIVSGSEDNL 639
W+ +GG R + + S L+ K EK+ C+ G ++SGS+D
Sbjct: 23 WRREVGGISSRNFSNRFSASENLVLRLEIYKKLEKHKGCVNTVSFNAEGDVLISGSDDRR 82
Query: 640 VYIWNLQSKEI-VQRLSGHTDTV 705
V +W+ Q + + SGH + V
Sbjct: 83 VVLWDWQLGNVKLSFHSGHANNV 105
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +3
Query: 96 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYV 191
+I S S DKTLKVW LS KCL+++K H + +
Sbjct: 186 IIYSGSWDKTLKVWRLSDLKCLESIKAHDDAI 217
Score = 31.1 bits (67), Expect = 0.78
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 388
+W + KCL+ + AH D ++ + DG + S+S DG +IW
Sbjct: 198 VWRLSDLKCLESIKAHDDAINGL-VAGDGR-VYSASADGKVKIW 239
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +3
Query: 9 WGAYDG-KFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL 170
W + G + GHK I +A S + S S D TL +W+ +SG+C++++
Sbjct: 171 WSCFPGLAMVAALEGHKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVRSI 225
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Frame = +3
Query: 6 IWGAYDG-----KFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL 170
+W A D K+ ++ GH G + ++ S S DKT+KVW+L++ +C TL
Sbjct: 290 VWKATDSESDPFKYLTSLEGHHSG-EVTCFVVGGEVLYSGSVDKTIKVWDLNTLQCRMTL 348
Query: 171 KGH 179
K H
Sbjct: 349 KQH 351
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +1
Query: 532 KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLC 711
K L + GH + + F V GG+ + SGS D + +W+L + + L H TV
Sbjct: 302 KYLTSLEGHHSGEVTCF----VVGGEVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTVTS 357
Query: 712 TAC 720
C
Sbjct: 358 LLC 360
Score = 32.7 bits (71), Expect = 0.26
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 293 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 421
L H + + + + + S S DG IWD SGQC++++
Sbjct: 183 LEGHKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVRSI 225
Score = 29.1 bits (62), Expect = 3.2
Identities = 27/100 (27%), Positives = 45/100 (45%)
Frame = +2
Query: 302 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 481
HS V+ F G ++ S S D ++WD + QC TL S + + K +
Sbjct: 311 HSGEVTC--FVVGGEVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTVTSLLCWD---KCL 365
Query: 482 LAATLDNTLNYGTIAEENV*RHIRDTRTKNIVSLPTLVSL 601
++++LD T+ EN + TR K +S+ TL +
Sbjct: 366 ISSSLDGTIKLWA-CSENESLKVVQTR-KQELSVHTLCGM 403
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8
WD-40 repeats (PF00400) (2 weak)
Length = 1108
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Frame = +3
Query: 12 GAYDGKFEKTISGHKMGISDVAWSSDSR--LIVSASDDKTLKVWELSSGKCLKTLKGHSN 185
G D + I H ++D+A+++ +R +++ DDK +KVW++S K T +GH
Sbjct: 438 GPNDLRQHTEIDAHVGAVNDLAFANPNRQLCVITCGDDKLIKVWDVSGRKHF-TFEGHDA 496
Query: 186 --YVFCCNFNPQSNLIVSGSFDESV 254
Y C ++ I S + D +
Sbjct: 497 PVYSICPHYKENIQFIFSTAIDGKI 521
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 580 FANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGH 693
F F I G ED+ ++I+N++ E+ +L GH
Sbjct: 866 FLAFHPQDNNVIAIGMEDSTIHIYNVRVDEVKSKLKGH 903
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Frame = +2
Query: 251 CWIWDVRTGKCLKPLPAHSD----PVSAVHFNRDGSLIVSS-SYDGLCRIWDTASGQCLK 415
C ++D+RTG L+ H D PV+++ F+ G L+ + + + C +WDT G+ +
Sbjct: 210 CRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVL 269
Query: 416 TL---IDDDNPPVSFVKFSPNGKYILAATLDNTL 508
L D +S + S +G + + D+ L
Sbjct: 270 DLGLQQDSHRNRISCLGLSADGSALCTGSWDSNL 303
Score = 35.9 bits (79), Expect = 0.028
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +3
Query: 78 WSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 245
W+ + IVSAS D L VW + + +K +V C F+P + G D
Sbjct: 11 WTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGLD 66
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +2
Query: 251 CWIWDVRTGKCLKPL----PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 388
C++WD G+ + L +H + +S + + DGS + + S+D +IW
Sbjct: 257 CYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCTGSWDSNLKIW 306
Score = 32.7 bits (71), Expect = 0.26
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Frame = +2
Query: 251 CWIWDVRTGKCLKPL-----PAHSDPVSAVHFNRDG-SLIVSSSYDGLCRIWDT-ASGQC 409
C +WDV TG H+ V +V + + +S S D R+WDT A+ +
Sbjct: 119 CILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRA 178
Query: 410 LKTLIDDDNPPVSFVKFSPNG 472
++T + V+ VKF P+G
Sbjct: 179 VRTFHGHEG-DVNTVKFFPDG 198
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/50 (24%), Positives = 27/50 (54%)
Frame = +3
Query: 36 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSN 185
+T GH+ ++ V + D + SDD T +++++ +G L+ + H +
Sbjct: 180 RTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGD 229
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Frame = +1
Query: 511 LWDYSRGKCLKTYTGHKNEKYCI-FANFSVTGGK--WIVSGSEDNLVYIWNLQ-SKEIVQ 678
LWD + G + G + + S++G W +SGS D+ +W+ + + V+
Sbjct: 121 LWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVR 180
Query: 679 RLSGHTDTV 705
GH V
Sbjct: 181 TFHGHEGDV 189
Score = 27.5 bits (58), Expect = 9.6
Identities = 19/90 (21%), Positives = 36/90 (40%), Gaps = 8/90 (8%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK-------CLK 164
+W A + I + A+S + + + D ++ LSS +
Sbjct: 29 VWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSR 88
Query: 165 TLKGHSNYVFCCNFNPQSNL-IVSGSFDES 251
L GH YV CC + P + +++ S D++
Sbjct: 89 MLTGHRGYVSCCQYVPNEDAHLITSSGDQT 118
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/68 (27%), Positives = 38/68 (55%)
Frame = +3
Query: 51 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 230
H +S ++ + L+ S+S D T+KVW ++ KCL+++ H + + + +L+
Sbjct: 234 HNDAVSSLSLDVELGLLYSSSWDTTIKVWRIADSKCLESIHAHDDAINSV-MSGFDDLVF 292
Query: 231 SGSFDESV 254
+GS D +V
Sbjct: 293 TGSADGTV 300
Score = 36.3 bits (80), Expect = 0.021
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 388
+W + KCL+ + AH D +++V D L+ + S DG ++W
Sbjct: 261 VWRIADSKCLESIHAHDDAINSVMSGFD-DLVFTGSADGTVKVW 303
Score = 34.7 bits (76), Expect = 0.064
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = +2
Query: 302 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
H+D VS++ + + L+ SSS+D ++W A +CL+++ D+
Sbjct: 234 HNDAVSSLSLDVELGLLYSSSWDTTIKVWRIADSKCLESIHAHDD 278
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 54 KMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL 170
K I + +S+ +L VSA DDK +K+W S +CL T+
Sbjct: 63 KESIRAIRYSTSGKLFVSAGDDKLVKIWSADSWRCLNTV 101
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +2
Query: 296 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 475
P + + A+ ++ G L VS+ D L +IW S +CL T+ + VS V S +
Sbjct: 60 PIRKESIRAIRYSTSGKLFVSAGDDKLVKIWSADSWRCLNTVCSEKR--VSAVAISSDDS 117
Query: 476 YILAA 490
++ A
Sbjct: 118 HVCYA 122
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +2
Query: 314 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD-NPPVSFVKFSPNGKYILAA 490
+ V FN GSL+ + DG C IWD + K + D+D + ++ V +S G +L +
Sbjct: 26 IKCVAFNHRGSLLAAGCADGGCVIWDFETRGIAKEIRDNDCSAAITSVSWSKYGHRLLVS 85
Query: 491 TLDNTL 508
D +L
Sbjct: 86 AADKSL 91
Score = 36.3 bits (80), Expect = 0.021
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
Frame = +2
Query: 278 KCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK 457
KC + P S P +A FN+ G L+ + G I D S + L + PV +
Sbjct: 166 KCPESNPPFS-PAAAC-FNKCGDLVYIGNSKGEILIVDYKSVRVLALVSASGAAPVKNIV 223
Query: 458 FSPNGKYILAATLDNTLNY--GTIAEENV*RHIRDTRTKNIVSL 583
FS NG+Y+L + D T+ + +NV + + D KNI L
Sbjct: 224 FSRNGQYLLTNSHDRTIRIYENLLPAKNVLKSLEDL-GKNIDGL 266
Score = 31.1 bits (67), Expect = 0.78
Identities = 15/32 (46%), Positives = 25/32 (78%), Gaps = 1/32 (3%)
Frame = +3
Query: 63 ISDVAWSS-DSRLIVSASDDKTLKVWELSSGK 155
I+ V+WS RL+VSA+D K+L +W++S+G+
Sbjct: 70 ITSVSWSKYGHRLLVSAAD-KSLTLWDVSTGE 100
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +3
Query: 48 GHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNL 224
GH+ I+DV+W + L SA +D L +W+ + + +K H V +FNP +
Sbjct: 215 GHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPFNEW 274
Query: 225 IVSGSFDES 251
+++ + +S
Sbjct: 275 VLATASSDS 283
Score = 35.9 bits (79), Expect = 0.028
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Frame = +3
Query: 15 AYDGKFEKTIS--GHKMGISDVAWS-SDSRLIVSASDDKTLKVWELS 146
A DG E S GHK ISD AW+ ++ +I S ++D +L+VW+++
Sbjct: 348 AEDGPPELLFSHGGHKAKISDFAWNKNEPWVIASVAEDNSLQVWQMA 394
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Frame = +3
Query: 42 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWE-LSSGKCLKTLKGHSNYVFCCNFNP-- 212
++GH+ ++ V ++S ++VS SDD+ + +W LS + L GH VF F P
Sbjct: 51 LNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPFT 110
Query: 213 QSNLIVSGSFDESVGYG-M*EQGNV 284
I++ D V G + E G V
Sbjct: 111 DDRTIITSGADGQVRLGQILENGKV 135
Score = 35.5 bits (78), Expect = 0.036
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +1
Query: 541 KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTAC 720
+ Y GH+N + NF +++ SGS+ ++IW + ++V+ + G V
Sbjct: 312 QVYIGHRNAQTVKGVNFFGPNDEYVTSGSDCGHIFIWKKKGGKLVRAMVGDRRVVNQLES 371
Query: 721 HP 726
HP
Sbjct: 372 HP 373
Score = 33.9 bits (74), Expect = 0.11
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +2
Query: 293 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP-- 466
L H V+AV FN G ++VS S D +W+ SG + V KF P
Sbjct: 51 LNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPFT 110
Query: 467 NGKYILAATLDNTLNYGTIAE 529
+ + I+ + D + G I E
Sbjct: 111 DDRTIITSGADGQVRLGQILE 131
Score = 31.1 bits (67), Expect = 0.78
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +1
Query: 526 RGKCLKTYTGHKNEKYCIFA-NFSVTGGKWIVSGSEDNLVYIWN-LQSKEIVQRLSGHTD 699
R K L Y + C+ A F+ TG +VSGS+D + +WN L + SGH +
Sbjct: 41 RVKKLDLYGKLNGHEGCVNAVEFNSTGDV-LVSGSDDRQIMLWNWLSGSRKLSYPSGHCE 99
Query: 700 TVLCTACHP 726
V T P
Sbjct: 100 NVFQTKFIP 108
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/75 (25%), Positives = 38/75 (50%)
Frame = +3
Query: 24 GKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCN 203
G + T GHK + +++ SAS D + K+W+ +G L + + H + V C
Sbjct: 51 GDWIGTFEGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACA 109
Query: 204 FNPQSNLIVSGSFDE 248
F+ + +++G F++
Sbjct: 110 FSQDTKYLITGGFEK 124
Score = 35.5 bits (78), Expect = 0.036
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 394
++D TGK + H PV V F G S S DG RIW T
Sbjct: 254 LFDFHTGKEIGCNKGHHGPVHCVRFAPTGESYASGSEDGTIRIWQT 299
Score = 35.1 bits (77), Expect = 0.048
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +1
Query: 478 YIGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 651
++ G +L+D+ GK + GH +C+ F+ TG + SGSED + IW
Sbjct: 243 FVAGGEDMWVRLFDFHTGKEIGCNKGHHGPVHCV--RFAPTGESY-ASGSEDGTIRIW 297
Score = 33.1 bits (72), Expect = 0.19
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +3
Query: 102 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 254
V+ +D +++++ +GK + KGH V C F P SGS D ++
Sbjct: 244 VAGGEDMWVRLFDFHTGKEIGCNKGHHGPVHCVRFAPTGESYASGSEDGTI 294
Score = 32.3 bits (70), Expect = 0.34
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 391
+WDVR+GK ++ L S PV++ ++DG I ++ + WD
Sbjct: 172 LWDVRSGKIVQTLETKS-PVTSAEVSQDGRYITTAD-GSTVKFWD 214
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/81 (25%), Positives = 38/81 (46%)
Frame = +2
Query: 248 ECWIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 427
E + D TGK L L H D A ++ DG + + D CR+WD + ++
Sbjct: 298 ESLLVDPNTGKTLATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDIRNLSKSVAVLR 357
Query: 428 DDNPPVSFVKFSPNGKYILAA 490
+ + ++++ +GKY+ A
Sbjct: 358 GNLGAIRSIRYTSDGKYMAMA 378
Score = 33.1 bits (72), Expect = 0.19
Identities = 15/63 (23%), Positives = 33/63 (52%)
Frame = +3
Query: 63 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 242
++ + S D +L+ D+ + + ++GK L TL GH ++ F ++P +G+
Sbjct: 278 VNHTSLSPDGKLLTIVGDNPESLLVDPNTGKTLATLSGHLDFSFASAWHPDGFTFSTGNQ 337
Query: 243 DES 251
D++
Sbjct: 338 DKT 340
Score = 32.7 bits (71), Expect = 0.26
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 24 GKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSS-GKCLKTLKGH 179
GK T+SGH AW D + + DKT +VW++ + K + L+G+
Sbjct: 307 GKTLATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDIRNLSKSVAVLRGN 359
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 24 GKFEKTISGHKMGISDVAWSSDSR-LIVSASDDKTLKVWELSSGKCLKTL 170
G F T+SGH+ G+ V WS+ S ++ + D ++ W++ C + L
Sbjct: 180 GAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRRAGCFRVL 229
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 45 SGHKMGISDVAWSS-DSRLIVSASDDKTLKVWELSSGKCLKTLK 173
+GHK IS W D+ L ++ S D LKVW+ ++ + + K
Sbjct: 100 NGHKYAISSAIWYPIDTGLFITGSFDHYLKVWDTNTAQAVVDFK 143
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +3
Query: 81 SSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGS 239
+SD +V KT+K + + SG+ L+GH V C FN L SGS
Sbjct: 366 TSDDPALVFVPCMKTVKAFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGS 419
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 299 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 406
AH V+ + DG ++S+ D R+WD SG+
Sbjct: 310 AHYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGR 345
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 317 SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 412
SA+ + D L ++ S+D ++WDT + Q +
Sbjct: 108 SAIWYPIDTGLFITGSFDHYLKVWDTNTAQAV 139
Score = 27.5 bits (58), Expect = 9.6
Identities = 8/37 (21%), Positives = 22/37 (59%)
Frame = +3
Query: 45 SGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK 155
+ H ++ + ++D ++SA D +++W++ SG+
Sbjct: 309 TAHYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGR 345
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 24 GKFEKTISGHKMGISDVAWSSDSR-LIVSASDDKTLKVWELSSGKCLKTL 170
G F T+SGH+ G+ V WS+ S ++ + D ++ W++ C + L
Sbjct: 180 GAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRRAGCFRVL 229
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/71 (23%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 51 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN-LI 227
++ +S +A S LI + +DD +++ +++SG TL GH + V ++ S ++
Sbjct: 149 YRTAMSSMAMSHT--LIAAGTDDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVL 206
Query: 228 VSGSFDESVGY 260
+G D ++ +
Sbjct: 207 YTGGCDGAIRF 217
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +3
Query: 81 SSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 254
+SD +V KT+K + + SG+ L+GH V C FN + + D +
Sbjct: 366 TSDDPALVFVPCMKTVKGFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGADRQI 423
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/83 (25%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Frame = +3
Query: 6 IWGAYDGKFEK--TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK-G 176
+W A G + TI K ++ + W+ D R + ++ +++W+ +S + L+TLK G
Sbjct: 164 LWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGG 223
Query: 177 HSNYVFCCNFNPQSNLIVSGSFD 245
H + V +N ++++ +G D
Sbjct: 224 HQSRVGSLAWN--NHILTTGGMD 244
Score = 34.3 bits (75), Expect = 0.084
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 254 WIWDVRTGKC--LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 421
++WD TG L + PV+++++ DG + + ++WD+AS + L+TL
Sbjct: 163 YLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTL 220
Score = 31.5 bits (68), Expect = 0.59
Identities = 13/53 (24%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = +2
Query: 350 IVSSSYDGLCRIWDTASGQCLKTL-IDDDNPPVSFVKFSPNGKYILAATLDNT 505
+++ + D +WD ++G + + ID++ PV+ + ++P+G+++ A L+N+
Sbjct: 153 VLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHV-AVGLNNS 204
Score = 31.5 bits (68), Expect = 0.59
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Frame = +3
Query: 36 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL------SSGKCLKTLKGHSNYVFC 197
+T GH + + WS + + S +D + +W+ S+ + L L+ H++ V
Sbjct: 260 ETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKA 319
Query: 198 CNFNP-QSNLIVSG 236
+ P Q+NL+ +G
Sbjct: 320 LAWCPFQANLLATG 333
Score = 30.7 bits (66), Expect = 1.0
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Frame = +1
Query: 526 RGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL------QSKEIVQRLS 687
R ++TY GH E + + S G+ + SG DN+V+IW+ + + + RL
Sbjct: 255 RSPIVETYRGHTQEVCGLKWSGS---GQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLE 311
Query: 688 GHTDTVLCTACHP 726
HT V A P
Sbjct: 312 EHTSAVKALAWCP 324
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/88 (20%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD--DKTLKVWELSSGKCLKTLKG 176
K W + G ++ + + WS + R ++S+ L +W+ S + L G
Sbjct: 342 KFWNTHTGACLNSVDTGSQ-VCSLLWSKNERELLSSHGFTQNQLTLWKYPSMVKMAELTG 400
Query: 177 HSNYVFCCNFNPQSNLIVSGSFDESVGY 260
H++ V +P + S + DE++ +
Sbjct: 401 HTSRVLYMAQSPDGCTVASAAGDETLRF 428
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 42 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL 143
++GH + +A S D + SA+ D+TL+ W +
Sbjct: 398 LTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 431
Score = 27.5 bits (58), Expect = 9.6
Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 1/89 (1%)
Frame = +2
Query: 260 WDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSY-DGLCRIWDTASGQCLKTLIDDDN 436
W+ TG CL + S S + + L+ S + +W S + L +
Sbjct: 344 WNTHTGACLNSVDTGSQVCSLLWSKNERELLSSHGFTQNQLTLWKYPSMVKMAELTGHTS 403
Query: 437 PPVSFVKFSPNGKYILAATLDNTLNYGTI 523
V ++ SP+G + +A D TL + +
Sbjct: 404 -RVLYMAQSPDGCTVASAAGDETLRFWNV 431
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/83 (25%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Frame = +3
Query: 6 IWGAYDGKFEK--TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK-G 176
+W A G + TI K ++ + W+ D R + ++ +++W+ +S + L+TLK G
Sbjct: 154 LWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGG 213
Query: 177 HSNYVFCCNFNPQSNLIVSGSFD 245
H + V +N ++++ +G D
Sbjct: 214 HQSRVGSLAWN--NHILTTGGMD 234
Score = 34.3 bits (75), Expect = 0.084
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 254 WIWDVRTGKC--LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 421
++WD TG L + PV+++++ DG + + ++WD+AS + L+TL
Sbjct: 153 YLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTL 210
Score = 31.5 bits (68), Expect = 0.59
Identities = 13/53 (24%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = +2
Query: 350 IVSSSYDGLCRIWDTASGQCLKTL-IDDDNPPVSFVKFSPNGKYILAATLDNT 505
+++ + D +WD ++G + + ID++ PV+ + ++P+G+++ A L+N+
Sbjct: 143 VLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHV-AVGLNNS 194
Score = 31.5 bits (68), Expect = 0.59
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Frame = +3
Query: 36 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL------SSGKCLKTLKGHSNYVFC 197
+T GH + + WS + + S +D + +W+ S+ + L L+ H++ V
Sbjct: 250 ETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKA 309
Query: 198 CNFNP-QSNLIVSG 236
+ P Q+NL+ +G
Sbjct: 310 LAWCPFQANLLATG 323
Score = 30.7 bits (66), Expect = 1.0
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Frame = +1
Query: 526 RGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL------QSKEIVQRLS 687
R ++TY GH E + + S G+ + SG DN+V+IW+ + + + RL
Sbjct: 245 RSPIVETYRGHTQEVCGLKWSGS---GQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLE 301
Query: 688 GHTDTVLCTACHP 726
HT V A P
Sbjct: 302 EHTSAVKALAWCP 314
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/88 (20%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD--DKTLKVWELSSGKCLKTLKG 176
K W + G ++ + + WS + R ++S+ L +W+ S + L G
Sbjct: 332 KFWNTHTGACLNSVDTGSQ-VCSLLWSKNERELLSSHGFTQNQLTLWKYPSMVKMAELTG 390
Query: 177 HSNYVFCCNFNPQSNLIVSGSFDESVGY 260
H++ V +P + S + DE++ +
Sbjct: 391 HTSRVLYMAQSPDGCTVASAAGDETLRF 418
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 42 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL 143
++GH + +A S D + SA+ D+TL+ W +
Sbjct: 388 LTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 421
Score = 27.5 bits (58), Expect = 9.6
Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 1/89 (1%)
Frame = +2
Query: 260 WDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSY-DGLCRIWDTASGQCLKTLIDDDN 436
W+ TG CL + S S + + L+ S + +W S + L +
Sbjct: 334 WNTHTGACLNSVDTGSQVCSLLWSKNERELLSSHGFTQNQLTLWKYPSMVKMAELTGHTS 393
Query: 437 PPVSFVKFSPNGKYILAATLDNTLNYGTI 523
V ++ SP+G + +A D TL + +
Sbjct: 394 -RVLYMAQSPDGCTVASAAGDETLRFWNV 421
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 38.7 bits (86), Expect = 0.004
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +3
Query: 48 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELS 146
GHK I V+WS D + +++ S DK+ K+W++S
Sbjct: 230 GHKGSIYAVSWSPDGKQVLTVSADKSAKIWDIS 262
Score = 38.3 bits (85), Expect = 0.005
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Frame = +2
Query: 302 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF--VKFSPNGK 475
HS+ V+ V F DGS ++ S D I+D + + L L DD S V +SP+GK
Sbjct: 186 HSNFVNCVRFAPDGSKFITVSSDKKGIIYDGKTCEILGELSSDDGHKGSIYAVSWSPDGK 245
Query: 476 YILAATLDNTLNYGTIAE 529
+L + D + I++
Sbjct: 246 QVLTVSADKSAKIWDISD 263
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +3
Query: 45 SGHKMGISDVA-WSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 221
SGH +S +A ++ I+S S D + W L G C K + ++ + C F
Sbjct: 321 SGHMKNVSSLAVLKGNADYILSGSYDGLICKWMLGRGFCGKLQRTQNSQIKC--FAAHEE 378
Query: 222 LIVSGSFDESV 254
IV+ +D +
Sbjct: 379 EIVTSGYDNKI 389
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Frame = +3
Query: 42 ISGHKMGISDVAWSSDSR--LIVSASDDKTLKVWELSSGKCLKTLKGHSN--YVFCCNFN 209
I H ++D+A++ ++ +V+ DDK +KVW+L SGK L T +GH Y C +
Sbjct: 449 IDAHVGCVNDLAFAHPNKQMCVVTCGDDKLIKVWDL-SGKKLFTFEGHEAPVYSICPHQK 507
Query: 210 PQSNLIVSGSFDESV 254
I S + D +
Sbjct: 508 ENIQFIFSTALDGKI 522
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 580 FANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGH 693
F F I G ED+ ++I+N++ E+ +L GH
Sbjct: 877 FLAFHPQDNNIIAIGMEDSSIHIYNVRVDEVKTKLKGH 914
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = +3
Query: 36 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 215
K H + AW D + + DK K+W L SG T+ H + P
Sbjct: 67 KVSMSHDQPVLCSAWKDDGTTVFTGGCDKQAKMWPLLSGAQPSTVAMHDAPFNQIAWIPG 126
Query: 216 SNLIVSGSFDESV 254
NL+V+GS+D+++
Sbjct: 127 MNLLVTGSWDKTL 139
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLK 131
K+W G T++ H + +AW L+V+ S DKTLK
Sbjct: 98 KMWPLLSGAQPSTVAMHDAPFNQIAWIPGMNLLVTGSWDKTLK 140
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/70 (22%), Positives = 30/70 (42%)
Frame = +2
Query: 299 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 478
+H PV + DG+ + + D ++W SG T+ D P + + + P
Sbjct: 71 SHDQPVLCSAWKDDGTTVFTGGCDKQAKMWPLLSGAQPSTVAMHD-APFNQIAWIPGMNL 129
Query: 479 ILAATLDNTL 508
++ + D TL
Sbjct: 130 LVTGSWDKTL 139
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +3
Query: 39 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSN 185
T+ GH +S V + D +V+A D LK+W + G+ ++T +GH N
Sbjct: 108 TLQGHTKTVSYVRFL-DGGTVVTAGTDGCLKLWSVEDGRVIRTYEGHVN 155
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = +2
Query: 254 WIWDVRTGKCLKP---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 418
+++D+R K + P L H+ VS V F DG +V++ DG ++W G+ ++T
Sbjct: 95 YVYDIR--KLVDPALTLQGHTKTVSYVRF-LDGGTVVTAGTDGCLKLWSVEDGRVIRT 149
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYTGHKNEKYCIFANFSV-TGGKWIVSGSEDNLVYIWN 654
+LW G+ ++TY GH N + F SV G GSE+N V++++
Sbjct: 137 KLWSVEDGRVIRTYEGHVNNRN--FVGLSVWRNGALFGCGSENNRVFVYD 184
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/56 (39%), Positives = 36/56 (64%)
Frame = +3
Query: 27 KFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVF 194
K E + GH+ I+ +A S I S S D ++++W+ SS KC+KTL+ HS++V+
Sbjct: 248 KTEFRLWGHEGPITSLALDMTS--IFSGSWDMSVRIWDRSSMKCVKTLR-HSDWVW 300
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +2
Query: 302 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 433
H P++++ D + I S S+D RIWD +S +C+KTL D
Sbjct: 256 HEGPITSLAL--DMTSIFSGSWDMSVRIWDRSSMKCVKTLRHSD 297
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +2
Query: 293 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 403
L H++ V V L+ +S YD + R+WD G
Sbjct: 158 LYGHTEAVRTVFLLASAKLVFTSGYDSIVRMWDMEEG 194
>At2g34260.2 68415.m04192 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 296
Score = 38.3 bits (85), Expect = 0.005
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD--TASGQCLKTLIDD 430
IWD R C AH D +S + F D +V +S DG + + T+ Q +D
Sbjct: 62 IWDTRQRSCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLSVCNLRTSKVQSQSEFSED 121
Query: 431 DNPPVSFVKFSPNGKYILAATLDNTL 508
+ V +K NG+ ++ T + TL
Sbjct: 122 ELLSVVIMK---NGRKVICGTQNGTL 144
Score = 31.1 bits (67), Expect = 0.78
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK 155
KIW + H+ IS + ++SDS +V S D TL V L + K
Sbjct: 61 KIWDTRQRSCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLSVCNLRTSK 111
>At2g34260.1 68415.m04191 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 353
Score = 38.3 bits (85), Expect = 0.005
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD--TASGQCLKTLIDD 430
IWD R C AH D +S + F D +V +S DG + + T+ Q +D
Sbjct: 119 IWDTRQRSCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLSVCNLRTSKVQSQSEFSED 178
Query: 431 DNPPVSFVKFSPNGKYILAATLDNTL 508
+ V +K NG+ ++ T + TL
Sbjct: 179 ELLSVVIMK---NGRKVICGTQNGTL 201
Score = 31.1 bits (67), Expect = 0.78
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK 155
KIW + H+ IS + ++SDS +V S D TL V L + K
Sbjct: 118 KIWDTRQRSCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLSVCNLRTSK 168
>At2g31300.1 68415.m03821 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
identical to putative ARP2/3 protein complex subunit p41
(GI:4432825)[Arabidopsis thaliana]; similar to ARP2/3
complex 41 kDa subunit (P41-ARC) (Actin-related protein
2/3 complex subunit 1B) (SP:Q9WV32) [Mus musculus]
Length = 378
Score = 38.3 bits (85), Expect = 0.005
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +3
Query: 51 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL--KGHSNYVFCCNFNPQSNL 224
H +S + WSS S IV+ S D+ VW L + + TL + C ++P+ N
Sbjct: 54 HDQIVSGIDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPKENK 113
Query: 225 IVSGSFDESVGYGM*EQGN 281
GS ++V EQ N
Sbjct: 114 FAVGSGAKTVCICYYEQEN 132
>At2g30910.2 68415.m03768 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 38.3 bits (85), Expect = 0.005
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +3
Query: 51 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL--KGHSNYVFCCNFNPQSNL 224
H +S + WSS S IV+ S D+ VW L + + TL + C ++P+ N
Sbjct: 54 HDQIVSGIDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPKENK 113
Query: 225 IVSGSFDESVGYGM*EQGN 281
GS ++V EQ N
Sbjct: 114 FAVGSGAKTVCICYYEQEN 132
>At2g30910.1 68415.m03767 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 38.3 bits (85), Expect = 0.005
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +3
Query: 51 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL--KGHSNYVFCCNFNPQSNL 224
H +S + WSS S IV+ S D+ VW L + + TL + C ++P+ N
Sbjct: 54 HDQIVSGIDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPKENK 113
Query: 225 IVSGSFDESVGYGM*EQGN 281
GS ++V EQ N
Sbjct: 114 FAVGSGAKTVCICYYEQEN 132
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and activator
of transcription interacting protein 1 (GI:15929722) {Mus
musculus}; similar to hypothetical protein GB:AAD43147
GI:5430747 from (Arabidopsis thaliana); contains Pfam
PF00400: WD domain, G-beta repeat (11 copies, 2 weak)
Length = 840
Score = 38.3 bits (85), Expect = 0.005
Identities = 36/139 (25%), Positives = 68/139 (48%), Gaps = 10/139 (7%)
Frame = +2
Query: 248 ECWIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYD---GLCRIWDTASGQC--- 409
E W+W+V T K + L +HS V+ + F+ D +L++S S D + I T +G+
Sbjct: 628 EIWLWEVGTWKAVGRLQSHSLTVTHLEFSYDDTLLLSVSRDRHFSVFSIQRTDNGEVSHK 687
Query: 410 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLNYGTIAEENV*RHIRDTRTKNIVSLP- 586
L ++ + ++P G ++ D T+ ++ EN D R K I+ LP
Sbjct: 688 LMAKVEAHKRIIWACSWNPFGHQFATSSRDKTVKIWSV--EN------DARIKQILVLPP 739
Query: 587 ---TLVSLAGSG*YRDQKT 634
++ ++A +G R++K+
Sbjct: 740 FGSSVTAVAWTGLDRNEKS 758
Score = 32.7 bits (71), Expect = 0.26
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 27 KFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVW 137
+ +K SGH ++DV W+ ++S S D+T +V+
Sbjct: 406 QMQKVPSGHFAAVTDVTWARTGEYLLSVSQDQTTRVF 442
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = +3
Query: 12 GAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL 170
G K + HK I +W+ ++S DKT+K+W + + +K +
Sbjct: 682 GEVSHKLMAKVEAHKRIIWACSWNPFGHQFATSSRDKTVKIWSVENDARIKQI 734
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 37.9 bits (84), Expect = 0.007
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = +3
Query: 42 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL 170
+ GH+ ++ +A S S + +AS D+T+++W+ +SG+C L
Sbjct: 140 LDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVL 182
Score = 35.5 bits (78), Expect = 0.036
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 601 GGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTAC 720
G + SG+ DN + +W+L + + +Q L+ HT V+ C
Sbjct: 276 GANRLYSGAMDNSIKVWSLDNLQCIQTLTEHTSVVMSLIC 315
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +2
Query: 284 LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 421
L L H V+ + + ++S D RIWD ASGQC L
Sbjct: 137 LTQLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVL 182
Score = 31.5 bits (68), Expect = 0.59
Identities = 14/51 (27%), Positives = 30/51 (58%)
Frame = +3
Query: 39 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYV 191
++ GH + + V+ + + S + D ++KVW L + +C++TL H++ V
Sbjct: 262 SLLGHTLAV--VSLYVGANRLYSGAMDNSIKVWSLDNLQCIQTLTEHTSVV 310
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/60 (23%), Positives = 32/60 (53%)
Frame = +2
Query: 350 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLNYGTIAE 529
+ S + D ++W + QC++TL + + +S + + +++L+ +LDNT+ E
Sbjct: 280 LYSGAMDNSIKVWSLDNLQCIQTLTEHTSVVMSLICWD---QFLLSCSLDNTVKIWAATE 336
>At3g56900.1 68416.m06329 aladin-related / adracalin-related weak
similarity to SP|Q9NRG9 Aladin (Adracalin) (GL003) {Homo
sapiens}; non-consensus AT-AC splice sites at intron 6
Length = 447
Score = 37.9 bits (84), Expect = 0.007
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2
Query: 302 HSDPVSAVHFNRDGSLIVSSSYDGLC-RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 478
+ + +SA+ ++ G + S+SYD IWD + G T I +S +K+SP G Y
Sbjct: 211 NDEQISALSWSPCGRYLASASYDSSSFTIWDVSQGA--GTPIRRGLGGISMLKWSPTGDY 268
Query: 479 ILAATLDNT 505
AA D T
Sbjct: 269 FFAARFDGT 277
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/76 (22%), Positives = 34/76 (44%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
IWDV G P+ +S + ++ G ++ +DG +W+T + + +
Sbjct: 239 IWDVSQGAGT-PIRRGLGGISMLKWSPTGDYFFAARFDGTFCLWETNTWTSEPWSLSSGS 297
Query: 437 PPVSFVKFSPNGKYIL 484
V+ + P G++IL
Sbjct: 298 GSVTGAIWDPEGRFIL 313
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +3
Query: 63 ISDVAWSSDSRLIVSAS-DDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 239
IS ++WS R + SAS D + +W++S G +G + ++P + +
Sbjct: 215 ISALSWSPCGRYLASASYDSSSFTIWDVSQGAGTPIRRGLGG-ISMLKWSPTGDYFFAAR 273
Query: 240 FD 245
FD
Sbjct: 274 FD 275
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/75 (25%), Positives = 38/75 (50%)
Frame = +3
Query: 24 GKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCN 203
G + T GHK + +++ SAS D + K+W+ +G L + + H + V C
Sbjct: 51 GDWIGTFEGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACA 109
Query: 204 FNPQSNLIVSGSFDE 248
F+ + +++G F++
Sbjct: 110 FSEDTKSLLTGGFEK 124
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 394
++D TG+ + H PV V F G S S DG RIW T
Sbjct: 254 VFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIWQT 299
Score = 32.3 bits (70), Expect = 0.34
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 391
+WDVR+GK ++ L S PV++ ++DG I ++ + WD
Sbjct: 172 LWDVRSGKIVQTLETKS-PVTSAEVSQDGRYITTAD-GSTVKFWD 214
Score = 31.9 bits (69), Expect = 0.45
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +3
Query: 102 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 254
V+ +D ++V++ +G+ + KGH V C F P SGS D ++
Sbjct: 244 VAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTI 294
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +3
Query: 63 ISDVAW-SSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
I + W SD ++ S +D +++W++ SGK ++TL+ S
Sbjct: 148 IRTLTWLHSDQTILSSCTDIGGVRLWDVRSGKIVQTLETKS 188
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/75 (25%), Positives = 38/75 (50%)
Frame = +3
Query: 24 GKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCN 203
G + T GHK + +++ SAS D + K+W+ +G L + + H + V C
Sbjct: 51 GDWIGTFEGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACA 109
Query: 204 FNPQSNLIVSGSFDE 248
F+ + +++G F++
Sbjct: 110 FSEDTKSLLTGGFEK 124
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 394
++D TG+ + H PV V F G S S DG RIW T
Sbjct: 254 VFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIWQT 299
Score = 32.3 bits (70), Expect = 0.34
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 391
+WDVR+GK ++ L S PV++ ++DG I ++ + WD
Sbjct: 172 LWDVRSGKIVQTLETKS-PVTSAEVSQDGRYITTAD-GSTVKFWD 214
Score = 31.9 bits (69), Expect = 0.45
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +3
Query: 102 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 254
V+ +D ++V++ +G+ + KGH V C F P SGS D ++
Sbjct: 244 VAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTI 294
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +3
Query: 63 ISDVAW-SSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
I + W SD ++ S +D +++W++ SGK ++TL+ S
Sbjct: 148 IRTLTWLHSDQTILSSCTDIGGVRLWDVRSGKIVQTLETKS 188
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = +3
Query: 81 SSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 251
S D +L+ DD + + S+G+ + TLKGH +Y F ++P +G+ D++
Sbjct: 286 SPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKT 342
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/76 (25%), Positives = 35/76 (46%)
Frame = +2
Query: 263 DVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 442
D G+ + L H D A ++ +G + + D CRIWDT ++ +
Sbjct: 305 DTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGA 364
Query: 443 VSFVKFSPNGKYILAA 490
V ++F+ +G+Y+ A
Sbjct: 365 VRSIRFTSDGRYVAMA 380
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = +3
Query: 81 SSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 251
S D +L+ DD + + S+G+ + TLKGH +Y F ++P +G+ D++
Sbjct: 280 SPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKT 336
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/76 (25%), Positives = 35/76 (46%)
Frame = +2
Query: 263 DVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 442
D G+ + L H D A ++ +G + + D CRIWDT ++ +
Sbjct: 299 DTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGA 358
Query: 443 VSFVKFSPNGKYILAA 490
V ++F+ +G+Y+ A
Sbjct: 359 VRSIRFTSDGRYVAMA 374
>At5g52250.1 68418.m06485 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to photomorphogenesis repressor PnCOP1
(GI:11127996) [Ipomoea nil]
Length = 385
Score = 37.5 bits (83), Expect = 0.009
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +1
Query: 514 WDYSRGK-CLKTYTGHKNEKYCIFANFSV-TGGKWIVSGSEDNLVYIWNLQSKEIVQRLS 687
WD G+ ++TY GH N + F SV G +VSGSE+N V++++ + +E V
Sbjct: 282 WDIDNGRRVVRTYRGHVNSRN--FVGLSVWRHGGLVVSGSENNQVFVYDKRWEEPVWVCG 339
Query: 688 -GHTD 699
GHT+
Sbjct: 340 LGHTN 344
>At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3
Pfam PF00400: WD domain, G-beta repeats;
Length = 1327
Score = 37.5 bits (83), Expect = 0.009
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Frame = +1
Query: 532 KCLKTYTG-HKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN----LQSKEIVQRLS 687
K + YTG HK YC+ + +G +VSG D L+ +W+ S+E+V +LS
Sbjct: 122 KLARRYTGGHKGSIYCLMNFMASSGEALLVSGGSDGLLVLWSADHGADSRELVPKLS 178
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 37.5 bits (83), Expect = 0.009
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Frame = +3
Query: 39 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWE---LSSGKCLK-TLKGHSNYVFCCNF 206
T+ HK ++ +A + D ++ S S D+++ VWE S+ ++ L+GH + F
Sbjct: 275 TLEKHKSAVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSL-F 333
Query: 207 NPQSNLIVSGSFDESV 254
N S+L++SGS D +V
Sbjct: 334 N-VSDLLLSGSADRTV 348
Score = 36.3 bits (80), Expect = 0.021
Identities = 19/87 (21%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI---D 427
IW +C + + AH D V+A+ + +G+ + + S D R+W +G+ TL+ +
Sbjct: 219 IWRASDLRCKESIKAHDDAVNAIAVSTNGT-VYTGSADRRIRVWAKPTGEKRHTLVATLE 277
Query: 428 DDNPPVSFVKFSPNGKYILAATLDNTL 508
V+ + + +G + + + D ++
Sbjct: 278 KHKSAVNALALNDDGSVLFSGSCDRSI 304
Score = 34.3 bits (75), Expect = 0.084
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +3
Query: 99 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 254
I S S DKTLK+W S +C +++K H + V + + + +GS D +
Sbjct: 208 IYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVS-TNGTVYTGSADRRI 258
Score = 33.1 bits (72), Expect = 0.19
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Frame = +3
Query: 42 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL---SSGKCLKTLKGHSNYVFCCNFNP 212
+ GH I + SD L++S S D+T+++W SS CL+ L GH+ V
Sbjct: 322 LRGHDKAILSLFNVSD--LLLSGSADRTVRIWRRGPDSSYSCLEVLSGHTKPVKSLAAVR 379
Query: 213 QSNL-----IVSGSFDESV 254
+ L I+SGS D V
Sbjct: 380 EKELDDVVSIISGSLDGEV 398
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = +2
Query: 257 IWDVRTGK----CLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 391
+W TG+ + L H V+A+ N DGS++ S S D +W+
Sbjct: 260 VWAKPTGEKRHTLVATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWE 308
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 37.1 bits (82), Expect = 0.012
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +3
Query: 36 KTISGHKMGISDVAWSSDSRLIVSASD---DKTLKVWELSSGKCLKTLKGHSNYVFCCNF 206
KTI+ K G+ V ++S ++ +S D +L++ L K L+ KGH + V +
Sbjct: 69 KTINSKKYGVDLVCFTSHPTTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSL 128
Query: 207 NPQSNLIVSGSFDESV 254
+SGS D +V
Sbjct: 129 CSGGECFISGSLDRTV 144
Score = 35.1 bits (77), Expect = 0.048
Identities = 19/67 (28%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Frame = +3
Query: 63 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL--KGHSNYVFCCNFNPQSNLIVS- 233
IS + + S +V+ASDD ++++++++S CLKT+ K + + C +P + + S
Sbjct: 36 ISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCFTSHPTTVIYSSR 95
Query: 234 GSFDESV 254
+D+S+
Sbjct: 96 NGWDDSL 102
Score = 34.3 bits (75), Expect = 0.084
Identities = 13/36 (36%), Positives = 25/36 (69%)
Frame = +2
Query: 314 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 421
+S++ F++ + +V++S D R++D AS CLKT+
Sbjct: 36 ISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTI 71
Score = 33.9 bits (74), Expect = 0.11
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA---SGQCLKTLID 427
+WD R KC L P +A D LI + ++ G R++D G +
Sbjct: 146 LWDQRVEKCQGLLRVQGRPAAAYD---DQGLIFAIAFGGYIRMFDARMYEKGPFEIFSVG 202
Query: 428 DDNPPVSFVKFSPNGKYILAATLDNTLN 511
D + VKFS +G+ +L T+D ++
Sbjct: 203 GDLSEANVVKFSNDGRLMLLTTMDGFIH 230
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/57 (22%), Positives = 27/57 (47%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK 173
++ +D K+ + GH + ++ S +S S D+T+ +W+ KC L+
Sbjct: 103 RLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRVEKCQGLLR 159
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +2
Query: 317 SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV--KFSPNGKYILAA 490
+ V F+ DG L++ ++ DG + D+ G L T S + FSP G ++++
Sbjct: 209 NVVKFSNDGRLMLLTTMDGFIHVLDSFRGTLLSTFSVKPVAGESTLDAAFSPEGMFVVSG 268
Query: 491 TLDNT 505
+ D +
Sbjct: 269 SGDGS 273
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 37.1 bits (82), Expect = 0.012
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +3
Query: 36 KTISGHKMGISDVAWSSDSRLIVSASD---DKTLKVWELSSGKCLKTLKGHSNYVFCCNF 206
KTI+ K G+ V ++S ++ +S D +L++ L K L+ KGH + V +
Sbjct: 66 KTINSKKYGVDLVCFTSHPTTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSL 125
Query: 207 NPQSNLIVSGSFDESV 254
+SGS D +V
Sbjct: 126 CSGGECFISGSLDRTV 141
Score = 35.1 bits (77), Expect = 0.048
Identities = 19/67 (28%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Frame = +3
Query: 63 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL--KGHSNYVFCCNFNPQSNLIVS- 233
IS + + S +V+ASDD ++++++++S CLKT+ K + + C +P + + S
Sbjct: 33 ISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCFTSHPTTVIYSSR 92
Query: 234 GSFDESV 254
+D+S+
Sbjct: 93 NGWDDSL 99
Score = 34.3 bits (75), Expect = 0.084
Identities = 13/36 (36%), Positives = 25/36 (69%)
Frame = +2
Query: 314 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 421
+S++ F++ + +V++S D R++D AS CLKT+
Sbjct: 33 ISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTI 68
Score = 33.9 bits (74), Expect = 0.11
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA---SGQCLKTLID 427
+WD R KC L P +A D LI + ++ G R++D G +
Sbjct: 143 LWDQRVEKCQGLLRVQGRPAAAYD---DQGLIFAIAFGGYIRMFDARMYEKGPFEIFSVG 199
Query: 428 DDNPPVSFVKFSPNGKYILAATLDNTLN 511
D + VKFS +G+ +L T+D ++
Sbjct: 200 GDLSEANVVKFSNDGRLMLLTTMDGFIH 227
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/57 (22%), Positives = 27/57 (47%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK 173
++ +D K+ + GH + ++ S +S S D+T+ +W+ KC L+
Sbjct: 100 RLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRVEKCQGLLR 156
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +2
Query: 317 SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV--KFSPNGKYILAA 490
+ V F+ DG L++ ++ DG + D+ G L T S + FSP G ++++
Sbjct: 206 NVVKFSNDGRLMLLTTMDGFIHVLDSFRGTLLSTFSVKPVAGESTLDAAFSPEGMFVVSG 265
Query: 491 TLDNT 505
+ D +
Sbjct: 266 SGDGS 270
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 37.1 bits (82), Expect = 0.012
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +3
Query: 42 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS- 218
+ GHK I + WSSD+R + S +D L VW S + + H+ V ++P
Sbjct: 288 LKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWSPHHF 347
Query: 219 NLIVSG 236
L+ SG
Sbjct: 348 GLLASG 353
Score = 36.7 bits (81), Expect = 0.016
Identities = 21/85 (24%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK-CLKTLKGH 179
+IW K +T+ GH++ + +AWSS ++ S S DK++ ++ + + + LKGH
Sbjct: 234 QIWDVLRCKNIRTMEGHRLRVGALAWSSS--VLSSGSRDKSILQRDIRTQEDHVSKLKGH 291
Query: 180 SNYVFCCNFNPQSNLIVSGSFDESV 254
+ + ++ + + SG D +
Sbjct: 292 KSEICGLKWSSDNRELASGGNDNKL 316
Score = 34.3 bits (75), Expect = 0.084
Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 IWGAYDGKFEKTIS-GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
+W A K K G + V W+ + + T+++W++ K ++T++GH
Sbjct: 192 LWNACSSKVTKLCDLGVDETVCSVGWALRGTHLAIGTSSGTVQIWDVLRCKNIRTMEGHR 251
Query: 183 NYVFCCNFNPQSNLIVSGSFDESV 254
V ++ S+++ SGS D+S+
Sbjct: 252 LRVGALAWS--SSVLSSGSRDKSI 273
Score = 34.3 bits (75), Expect = 0.084
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +3
Query: 63 ISDVAWSSDSRLIVSAS--DDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 236
+ ++ WS + +VS + VW+ + L TL GHS V +P IV+G
Sbjct: 381 VCNLVWSKNVNELVSTHGYSQNQIIVWKYPTMSKLATLTGHSYRVLYLAVSPDGQTIVTG 440
Query: 237 SFDESVGY 260
+ DE++ +
Sbjct: 441 AGDETLRF 448
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 39 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL 143
T++GH + +A S D + IV+ + D+TL+ W +
Sbjct: 417 TLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNV 451
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +1
Query: 613 IVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTACHP 726
+ SG DN +++WN S + V R H V A P
Sbjct: 307 LASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWSP 344
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKE-IVQRL 684
Q+WD R K ++T GH+ + + SV + SGS D + +++++E V +L
Sbjct: 234 QIWDVLRCKNIRTMEGHRLRVGALAWSSSV-----LSSGSRDKSILQRDIRTQEDHVSKL 288
Query: 685 SGHTDTV 705
GH +
Sbjct: 289 KGHKSEI 295
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 36.7 bits (81), Expect = 0.016
Identities = 18/76 (23%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Frame = +3
Query: 36 KTISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 212
+ +GH+ G+ + W SDS +++ + D W+ ++ + + L +N+ F ++ P
Sbjct: 257 REFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICWDTNTAEIVAELPAGNNWNFDVHWYP 316
Query: 213 Q-SNLIVSGSFDESVG 257
+ +I + SFD +G
Sbjct: 317 KIPGVISASSFDGKIG 332
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 314 VSAVHFNRD-GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN 469
+S + +NR ++ S+SY+G IWD + + D S ++++PN
Sbjct: 175 ISFISWNRKVQQILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWNPN 227
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 36.7 bits (81), Expect = 0.016
Identities = 18/76 (23%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Frame = +3
Query: 36 KTISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 212
+ +GH+ G+ + W SDS +++ + D W+ ++ + + L +N+ F ++ P
Sbjct: 257 REFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICWDTNTAEIVAELPAGNNWNFDVHWYP 316
Query: 213 Q-SNLIVSGSFDESVG 257
+ +I + SFD +G
Sbjct: 317 KIPGVISASSFDGKIG 332
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 314 VSAVHFNRD-GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN 469
+S + +NR ++ S+SY+G IWD + + D S ++++PN
Sbjct: 175 ISFISWNRKVQQILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWNPN 227
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 36.7 bits (81), Expect = 0.016
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +1
Query: 604 GKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 705
GK+I++G ED+LV +W+++ +++V GH V
Sbjct: 357 GKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWV 390
Score = 33.1 bits (72), Expect = 0.19
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +3
Query: 75 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYV 191
+WS D + I++ +D ++VW + K + +GH+++V
Sbjct: 352 SWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWV 390
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 36.3 bits (80), Expect = 0.021
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +1
Query: 541 KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTAC 720
K + GH + I NFS G+ + SGS D VY+++ +S ++++L + + +
Sbjct: 378 KRFEGHWVAGFPIKCNFS-PDGETLASGSSDGSVYMYDYKSTALIKKLKAYEQPCVNVSY 436
Query: 721 HP 726
HP
Sbjct: 437 HP 438
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +3
Query: 162 KTLKGH--SNYVFCCNFNPQSNLIVSGSFDESV 254
K +GH + + CNF+P + SGS D SV
Sbjct: 378 KRFEGHWVAGFPIKCNFSPDGETLASGSSDGSV 410
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 36.3 bits (80), Expect = 0.021
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA---SGQCLKTLID 427
+WD+R C L P AV +++ G + + G +++D+ G L+
Sbjct: 140 LWDLRVNACQGILHLRGRP--AVAYDQQGLVFAIAMEGGAVKLFDSRCYDKGPFDTFLVG 197
Query: 428 DDNPPVSFVKFSPNGKYILAATLDNTL 508
D V+ +KFS +GK +L T +N +
Sbjct: 198 GDTAEVNDIKFSNDGKSMLLTTTNNNI 224
Score = 32.7 bits (71), Expect = 0.26
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 604 GKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTACHP 726
GK+++SGS D ++ WN+++ V R + V C P
Sbjct: 256 GKYVLSGSGDGTLHAWNIENPSEVARWENNIGVVSCLKWAP 296
Score = 32.3 bits (70), Expect = 0.34
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +2
Query: 314 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNPPVSFVKFSPNGKYILA 487
V+ + F+ DG ++ ++ + + D G+ C +L P+ F+P+GKY+L+
Sbjct: 203 VNDIKFSNDGKSMLLTTTNNNIYVLDAYRGEKKCGFSLEPSQGTPIE-ATFTPDGKYVLS 261
Query: 488 ATLDNTLN 511
+ D TL+
Sbjct: 262 GSGDGTLH 269
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +3
Query: 18 YDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKC 158
YD + + GHK + + S + +S S D+++++W+L C
Sbjct: 102 YDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWDLRVNAC 148
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +3
Query: 111 SDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 254
S ++L+ + + L+ KGH + V +P ++ +SGS D SV
Sbjct: 91 STGESLRYLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDRSV 138
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 36.3 bits (80), Expect = 0.021
Identities = 21/65 (32%), Positives = 33/65 (50%)
Frame = +3
Query: 60 GISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 239
GI +A+S + + S D T+K W L G L T+ GH + V + ++ SGS
Sbjct: 588 GIHALAYSEYGH-VYTGSGDNTIKAWSLQDGSLLCTMSGHKSVV--STLVVVNGVLYSGS 644
Query: 240 FDESV 254
+D +V
Sbjct: 645 WDGTV 649
Score = 35.1 bits (77), Expect = 0.048
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL 170
K W DG T+SGHK +S + + ++ S S D T+++W LS L L
Sbjct: 610 KAWSLQDGSLLCTMSGHKSVVSTLVVVNG--VLYSGSWDGTVRLWSLSDNSLLTVL 663
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = +1
Query: 514 WDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGH 693
W G L T +GHK+ + + V G + SGS D V +W+L ++ L
Sbjct: 612 WSLQDGSLLCTMSGHKS----VVSTLVVVNGV-LYSGSWDGTVRLWSLSDNSLLTVLGEE 666
Query: 694 TDTVL 708
T ++
Sbjct: 667 TPGII 671
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +2
Query: 260 WDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 439
W ++ G L + H VS + ++ S S+DG R+W + S L T++ ++ P
Sbjct: 612 WSLQDGSLLCTMSGHKSVVSTLVVVN--GVLYSGSWDGTVRLW-SLSDNSLLTVLGEETP 668
Query: 440 PV 445
+
Sbjct: 669 GI 670
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 613 IVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 705
+ +GS DN + W+LQ ++ +SGH V
Sbjct: 600 VYTGSGDNTIKAWSLQDGSLLCTMSGHKSVV 630
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 36.3 bits (80), Expect = 0.021
Identities = 19/75 (25%), Positives = 37/75 (49%)
Frame = +3
Query: 24 GKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCN 203
G + T GHK + + ++ SAS D T K+W +G L + + H + V C
Sbjct: 46 GDWIGTFEGHKGAVWSCSLDKNAIRAASASADFTAKIWNALTGDELHSFE-HKHIVRACA 104
Query: 204 FNPQSNLIVSGSFDE 248
F+ ++ +++G ++
Sbjct: 105 FSEDTHRLLTGGMEK 119
Score = 33.9 bits (74), Expect = 0.11
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +3
Query: 48 GHKMGISDVAWSS---DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 218
GH + DVA+S D ++SAS D + +G + T +GH V+ C+ + +
Sbjct: 9 GHSRPVVDVAYSPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCSLDKNA 68
Query: 219 NLIVSGSFD 245
S S D
Sbjct: 69 IRAASASAD 77
Score = 32.7 bits (71), Expect = 0.26
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Frame = +1
Query: 478 YIGGDVRQHTQLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 657
+I G +D+ G+ + GH +C+ GG+ SGSED V IW +
Sbjct: 238 FIAGGEDMWVHRFDFQTGEEIGCNKGHHGPVHCVRY---APGGESYTSGSEDGTVRIWVV 294
Query: 658 QSKEIVQ--RLSGHTDTV 705
S + LSGH V
Sbjct: 295 GSVNHPEESNLSGHVKLV 312
Score = 31.5 bits (68), Expect = 0.59
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +2
Query: 248 ECWI--WDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 400
+ W+ +D +TG+ + H PV V + G S S DG RIW S
Sbjct: 244 DMWVHRFDFQTGEEIGCNKGHHGPVHCVRYAPGGESYTSGSEDGTVRIWVVGS 296
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +3
Query: 102 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 254
++ +D + ++ +G+ + KGH V C + P SGS D +V
Sbjct: 239 IAGGEDMWVHRFDFQTGEEIGCNKGHHGPVHCVRYAPGGESYTSGSEDGTV 289
>At4g34280.1 68417.m04873 transducin family protein / WD-40 repeat
family protein similar to TUPA (GI:11066216) [Emericella
nidulans]; similar to damage-specific DNA binding
protein 2, Homo sapiens ,PIR2:I38909; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies,1
weak)|19797453|gb|AU229277.1|AU229277
Length = 783
Score = 35.9 bits (79), Expect = 0.028
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +2
Query: 257 IWDVRTGKCLKPLP-AHSDPVSAVHF-NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 430
++D+ G L+ H + ++ V F N L +SS+D ++WD
Sbjct: 566 LYDIGRGTRLQVFANMHQEHINVVKFSNHSPFLFATSSFDKDVKLWDLRQEPSRPCYTAS 625
Query: 431 DNPPVSFVKFSPNGKYILAATLDN 502
V FSP+ +Y+LA+ +DN
Sbjct: 626 STKGNVMVCFSPDDRYLLASAVDN 649
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 35.9 bits (79), Expect = 0.028
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Frame = +3
Query: 39 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELS---SG---KCLKTLKGHSNYVFCC 200
T+ GH +S V + DS +VS+S D TLK+W+LS SG L + GH+N
Sbjct: 699 TMIGHSKTVSYVKFV-DSSTLVSSSTDNTLKLWDLSMSASGINESPLHSFTGHTNLKNFV 757
Query: 201 NFNPQSNLIVSGS 239
+ I +GS
Sbjct: 758 GLSVSDGYIATGS 770
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 254 WIWDVRTGKC-LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 391
+ +D+R K L + HS VS V F D S +VSSS D ++WD
Sbjct: 686 YYYDLRNPKIPLCTMIGHSKTVSYVKFV-DSSTLVSSSTDNTLKLWD 731
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +2
Query: 344 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN--TLNYG 517
S I SS++DG+ +IWD A Q L T + + V + S +LA+ D+ ++ G
Sbjct: 597 SQIASSNFDGVVQIWDVARSQ-LVTEMKEHKKRVWSIDISSADPTLLASGSDDGTGVSIG 655
Query: 518 TI 523
TI
Sbjct: 656 TI 657
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 35.9 bits (79), Expect = 0.028
Identities = 12/34 (35%), Positives = 24/34 (70%)
Frame = +1
Query: 604 GKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 705
GK++++G ED+LV +W+++ +++V GH V
Sbjct: 357 GKYLLTGGEDDLVQVWSMEDRKVVAWGEGHNSWV 390
Score = 33.5 bits (73), Expect = 0.15
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +3
Query: 75 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYV 191
AWS D + +++ +D ++VW + K + +GH+++V
Sbjct: 352 AWSMDGKYLLTGGEDDLVQVWSMEDRKVVAWGEGHNSWV 390
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 35.9 bits (79), Expect = 0.028
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +3
Query: 36 KTISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 212
+T GH+ G+ + W SDS +++ D W +GK + L N+ F ++ P
Sbjct: 246 RTFVGHQRGVIAMEWCPSDSLYLLTCGKDNRTICWNTKTGKIVAELPTGQNWNFDVHWYP 305
Query: 213 Q-SNLIVSGSFDESVG 257
+ +I + S D +G
Sbjct: 306 KMPGVISASSVDGKIG 321
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 35.5 bits (78), Expect = 0.036
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +3
Query: 30 FEKTISGHKMGISDVAWSSDS-RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF 206
F + GH+ G+S +A + + + I SAS D +++W++SS + + GH V
Sbjct: 48 FVGAMDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTA 107
Query: 207 NPQSNLIVSGSFDESV 254
+ N++VS D +V
Sbjct: 108 STDGNVLVSCGTDCTV 123
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/60 (23%), Positives = 28/60 (46%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 436
+WD+ + + + P H V + + DG+++VS D R+W+ + I +N
Sbjct: 83 LWDISSRRTVCQFPGHQGAVRGLTASTDGNVLVSCGTDCTVRLWNVPRPSLEDSSISSEN 142
Score = 31.1 bits (67), Expect = 0.78
Identities = 15/69 (21%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 51 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKG-HSNYVFCCNFNPQSNLI 227
H + D+ +S R V+ S D++++++ + G + VFC ++ + +
Sbjct: 278 HVSAVMDIDFSPTGREFVTGSYDRSVRIFPYNGGHSREIYHTKRMQRVFCVKYSCDATYV 337
Query: 228 VSGSFDESV 254
+SGS D ++
Sbjct: 338 ISGSDDTNL 346
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +1
Query: 553 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTV 705
GH++ C+ N + G I S S D + +W++ S+ V + GH V
Sbjct: 54 GHRDGVSCMAKNPNYLKG--IFSASMDGDIRLWDISSRRTVCQFPGHQGAV 102
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Frame = +3
Query: 66 SDVAWSSDSRL-IVSASDDKTLKVWE---LSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 233
+ +AW+ + + +A++D + ++ L KC+ K H + V +F+P V+
Sbjct: 239 NSIAWNPMEPMNLTAANEDGSCYSFDGRKLDEAKCVH--KDHVSAVMDIDFSPTGREFVT 296
Query: 234 GSFDESV 254
GS+D SV
Sbjct: 297 GSYDRSV 303
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +3
Query: 72 VAWSSDSRLIVSASDDKTLKVWELSSGKCL 161
V +S D+ ++S SDD L++W+ + + L
Sbjct: 328 VKYSCDATYVISGSDDTNLRLWKAKASEQL 357
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/47 (21%), Positives = 23/47 (48%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL 143
++W + GH+ + + S+D ++VS D T+++W +
Sbjct: 82 RLWDISSRRTVCQFPGHQGAVRGLTASTDGNVLVSCGTDCTVRLWNV 128
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/65 (20%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +1
Query: 478 YIGGDVRQHTQLWDYSRGKCLKTY-TGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 654
++ G + +++ Y+ G + Y T +C+ + T +++SGS+D + +W
Sbjct: 294 FVTGSYDRSVRIFPYNGGHSREIYHTKRMQRVFCVKYSCDAT---YVISGSDDTNLRLWK 350
Query: 655 LQSKE 669
++ E
Sbjct: 351 AKASE 355
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 35.5 bits (78), Expect = 0.036
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +3
Query: 42 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ-S 218
++GHK + + WS D+R + S +D L VW S + + H+ V ++P
Sbjct: 331 LAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWSPHVH 390
Query: 219 NLIVSG 236
L+ SG
Sbjct: 391 GLLASG 396
Score = 33.9 bits (74), Expect = 0.11
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +3
Query: 6 IWGAYDGKFEKTIS-GHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKGH 179
+W A K K G + + V W+ + L V S K +++W+ S K +T++GH
Sbjct: 235 LWNACSSKVTKLCDLGAEDSVCSVGWALRGTHLAVGTSTGK-VQIWDASRCKRTRTMEGH 293
Query: 180 SNYVFCCNFNPQSNLIVSGSFDESV 254
V + S+++ SGS D+S+
Sbjct: 294 RLRVGALAWG--SSVLSSGSRDKSI 316
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +3
Query: 63 ISDVAWSSDSRLIVSAS--DDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 236
+ ++AWS + +VS + VW+ + + TL GH+ V +P IV+G
Sbjct: 424 VCNLAWSKNVNELVSTHGYSQNQIIVWKYPTMSKIATLTGHTYRVLYLAVSPDGQTIVTG 483
Query: 237 SFDESVGY 260
+ DE++ +
Sbjct: 484 AGDETLRF 491
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +1
Query: 553 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTACHP 726
GHK+E + ++ + + SG DN +++WN S + V + S HT V A P
Sbjct: 333 GHKSEVCGLKWSYD---NRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWSP 387
Score = 33.1 bits (72), Expect = 0.19
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK-CLKTLKGH 179
+IW A K +T+ GH++ + +AW S ++ S S DK++ ++ + + L GH
Sbjct: 277 QIWDASRCKRTRTMEGHRLRVGALAWGSS--VLSSGSRDKSILQRDIRCQEDHVSKLAGH 334
Query: 180 SNYVFCCNFNPQSNLIVSGSFD 245
+ V ++ + + SG D
Sbjct: 335 KSEVCGLKWSYDNRELASGGND 356
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 39 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL 143
T++GH + +A S D + IV+ + D+TL+ W +
Sbjct: 460 TLTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNV 494
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +1
Query: 508 QLWDYSRGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQSKE-IVQRL 684
Q+WD SR K +T GH+ + G + SGS D + +++ +E V +L
Sbjct: 277 QIWDASRCKRTRTMEGHR-----LRVGALAWGSSVLSSGSRDKSILQRDIRCQEDHVSKL 331
Query: 685 SGHTDTV 705
+GH V
Sbjct: 332 AGHKSEV 338
>At4g21520.1 68417.m03110 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to guanine nucleotide-binding protein beta 5
(GI:1001939) [Mesocricetus auratus]
Length = 425
Score = 35.5 bits (78), Expect = 0.036
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +1
Query: 475 IYIGGDVRQHTQLWDYSRGKCL--KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYI 648
+Y GG + WD + + K Y +N +F + G + + +G +D LV++
Sbjct: 270 LYTGGRKDPYILCWDIRKSVEIVYKLYRATENTNQRVFFDIEPCG-RHLGTGGQDGLVHM 328
Query: 649 WNLQSKEIVQRLSGHTDTVLCTACHP 726
++LQ+ V +DTV + HP
Sbjct: 329 YDLQTGNWVSGYQAASDTVNAFSFHP 354
>At2g47790.1 68415.m05965 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; The first 3 exons are
identical to that of GB:AJ224957. This gene appears to
be a truncated version of that in GB:AJ224957; contains
4 WD-40 repeats (PF00400)
Length = 392
Score = 35.5 bits (78), Expect = 0.036
Identities = 20/89 (22%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDS----RLIVSASDDKTLKVWELSSGKCLKTL 170
K++ G++ GH ++ +A+SSDS ++ S S D T++ W+ S + + +
Sbjct: 66 KLYSPVTGQYYGECKGHSDTVNQIAFSSDSAASPHVLHSCSSDGTIRSWDTRSFQQVSRI 125
Query: 171 -KGHSNYVFCCNFNPQSNLIVSGSFDESV 254
G+ +F ++ ++ +++G E V
Sbjct: 126 DTGNDQEIFSFSYGGAADNLLAGGCKEQV 154
>At1g80710.1 68414.m09470 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to damage-specific DNA-binding protein 2 (DDB2)
[Mus musculus]
Length = 516
Score = 35.1 bits (77), Expect = 0.048
Identities = 16/31 (51%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +2
Query: 302 HSDPVSAVHFNRDG-SLIVSSSYDGLCRIWD 391
HS PVS++ F ++ S ++SSSYDGL R+ D
Sbjct: 262 HSAPVSSIVFQQNSLSRVISSSYDGLIRLMD 292
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +3
Query: 84 SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 239
+D + + D VW+L +GK + + H + +FNPQ+ +++ S
Sbjct: 316 NDEQSLYFGQDYGVFNVWDLRAGKSVFHWELHERRINSIDFNPQNPHVMATS 367
>At5g45760.2 68418.m05626 transducin family protein / WD-40 repeat
family protein
Length = 334
Score = 34.7 bits (76), Expect = 0.064
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +3
Query: 39 TISGHKMGISDVAWS---SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSN 185
++ GH +S VA+S R ++S +DKT+K+W+ KCL ++N
Sbjct: 243 SVGGHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCF--KCLDPNNNNNN 292
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +1
Query: 553 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 654
GH + C+ + G++++SG D V IW+
Sbjct: 246 GHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD 279
Score = 27.5 bits (58), Expect = 9.6
Identities = 19/74 (25%), Positives = 32/74 (43%)
Frame = +2
Query: 287 KPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 466
+ L H + +RD IV +S + C W + ++ +ID PVS + F
Sbjct: 9 RKLRGHKSTATCCIASRDRPGIVLTSGEDGCICWFDLRCKDVQFIIDVGTEPVSSLCFKT 68
Query: 467 NGKYILAATLDNTL 508
+ IL A+ N +
Sbjct: 69 GNENILYASCGNEI 82
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 34.7 bits (76), Expect = 0.064
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +3
Query: 39 TISGHKMGISDVAWS---SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSN 185
++ GH +S VA+S R ++S +DKT+K+W+ KCL ++N
Sbjct: 269 SVGGHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCF--KCLDPNNNNNN 318
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +1
Query: 553 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 654
GH + C+ + G++++SG D V IW+
Sbjct: 272 GHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD 305
Score = 27.5 bits (58), Expect = 9.6
Identities = 19/74 (25%), Positives = 32/74 (43%)
Frame = +2
Query: 287 KPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 466
+ L H + +RD IV +S + C W + ++ +ID PVS + F
Sbjct: 9 RKLRGHKSTATCCIASRDRPGIVLTSGEDGCICWFDLRCKDVQFIIDVGTEPVSSLCFKT 68
Query: 467 NGKYILAATLDNTL 508
+ IL A+ N +
Sbjct: 69 GNENILYASCGNEI 82
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 34.7 bits (76), Expect = 0.064
Identities = 15/41 (36%), Positives = 27/41 (65%)
Frame = +3
Query: 21 DGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL 143
DG+ ++I HK +S VA ++DS ++ + S D T+ VW++
Sbjct: 1035 DGRVVQSIRHHKDVVSCVAVTADSTILATGSYDTTVMVWDI 1075
Score = 34.7 bits (76), Expect = 0.064
Identities = 19/77 (24%), Positives = 38/77 (49%)
Frame = +2
Query: 293 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 472
L H D ++ ++ + D +++S S DG C G+ +++L VS + S +G
Sbjct: 1107 LCGHDDIITCLYVSTDLDIVISGSKDGTCVFHTLREGRYIRSLKHPSGSAVSKLAASHHG 1166
Query: 473 KYILAATLDNTLNYGTI 523
+ +L D +L+ +I
Sbjct: 1167 RIVLYGDDDLSLHLYSI 1183
Score = 32.3 bits (70), Expect = 0.34
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +2
Query: 275 GKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 391
G+ ++ + H D VS V D +++ + SYD +WD
Sbjct: 1036 GRVVQSIRHHKDVVSCVAVTADSTILATGSYDTTVMVWD 1074
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 34.3 bits (75), Expect = 0.084
Identities = 19/86 (22%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Frame = +3
Query: 6 IWGAYDGKFEK--TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK-G 176
+W A G K TI + ++ + W+ D + D+ +++W+ S + ++TL+ G
Sbjct: 116 LWDASSGSTYKLVTIDEEEGPVTSINWTQDGLDLAIGLDNSEVQLWDCVSNRQVRTLRGG 175
Query: 177 HSNYVFCCNFNPQSNLIVSGSFDESV 254
H + V +N ++++ +G D +
Sbjct: 176 HESRVGSLAWN--NHILTTGGMDGKI 199
Score = 32.3 bits (70), Expect = 0.34
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = +1
Query: 526 RGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQS 663
R ++TY GH E+ C +S +G K + SG DN+V+IW+ +S
Sbjct: 207 RSSIVETYLGH-TEEVCGL-KWSESGKK-LASGGNDNVVHIWDHRS 249
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/58 (22%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +2
Query: 254 WIWDVRTGKCLK--PLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 421
++WD +G K + PV+++++ +DG + + ++WD S + ++TL
Sbjct: 115 YLWDASSGSTYKLVTIDEEEGPVTSINWTQDGLDLAIGLDNSEVQLWDCVSNRQVRTL 172
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/86 (20%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD--DKTLKVWELSSGKCLKTLKG 176
K W + G ++ + + WS R ++S+ L +W+ S + L G
Sbjct: 295 KFWNTHTGACLNSVETGSQ-VCSLLWSKSERELLSSHGFTQNQLTLWKYPSMVKMAELNG 353
Query: 177 HSNYVFCCNFNPQSNLIVSGSFDESV 254
H++ V +P + S + DE++
Sbjct: 354 HTSRVLFMAQSPDGCTVASAAGDETL 379
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 42 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK 173
++GH + +A S D + SA+ D+TL++W + G+ KT K
Sbjct: 351 LNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNV-FGEPPKTTK 393
Score = 27.5 bits (58), Expect = 9.6
Identities = 22/92 (23%), Positives = 36/92 (39%), Gaps = 1/92 (1%)
Frame = +2
Query: 260 WDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSY-DGLCRIWDTASGQCLKTLIDDDN 436
W+ TG CL + S S + + L+ S + +W S + L +
Sbjct: 297 WNTHTGACLNSVETGSQVCSLLWSKSERELLSSHGFTQNQLTLWKYPSMVKMAEL-NGHT 355
Query: 437 PPVSFVKFSPNGKYILAATLDNTLNYGTIAEE 532
V F+ SP+G + +A D TL + E
Sbjct: 356 SRVLFMAQSPDGCTVASAAGDETLRLWNVFGE 387
>At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/58 (27%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Frame = +2
Query: 320 AVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD--NPPVSFVKFSPNGKYILA 487
++ FN+DG+++ + + DG R+++ S +KTL+++ + V + FS +GK++++
Sbjct: 147 SLSFNQDGTVLATGAEDGTLRVFEWPS---MKTLLNESKTHASVKSLTFSESGKFLVS 201
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Frame = +2
Query: 251 CWIWDVRTGKCLKPLPAHSDPVSA-VHFNRDGS------LIVSSSYDGLCRIWDTASGQC 409
C +WDV + L D + A F+ D S + ++ G WDT S +
Sbjct: 207 CRVWDVNASAAIASLSKEKDEMFASCRFSVDNSGSEVLYVAANTQRGGSIITWDTTSWRR 266
Query: 410 LKTLIDDDNPPVSFVKFSPNGKYILAATLD 499
+ + N +S S +GK + TL+
Sbjct: 267 RSSKLIKRNNSISAFNVSADGKLLAVGTLE 296
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +2
Query: 314 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 463
V ++ F+ G +VS LCR+WD + + +L + + + +FS
Sbjct: 187 VKSLTFSESGKFLVSLGAP-LCRVWDVNASAAIASLSKEKDEMFASCRFS 235
>At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/58 (27%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Frame = +2
Query: 320 AVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD--NPPVSFVKFSPNGKYILA 487
++ FN+DG+++ + + DG R+++ S +KTL+++ + V + FS +GK++++
Sbjct: 147 SLSFNQDGTVLATGAEDGTLRVFEWPS---MKTLLNESKTHASVKSLTFSESGKFLVS 201
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Frame = +2
Query: 251 CWIWDVRTGKCLKPLPAHSDPVSA-VHFNRDGS------LIVSSSYDGLCRIWDTASGQC 409
C +WDV + L D + A F+ D S + ++ G WDT S +
Sbjct: 207 CRVWDVNASAAIASLSKEKDEMFASCRFSVDNSGSEVLYVAANTQRGGSIITWDTTSWRR 266
Query: 410 LKTLIDDDNPPVSFVKFSPNGKYILAATLD 499
+ + N +S S +GK + TL+
Sbjct: 267 RSSKLIKRNNSISAFNVSADGKLLAVGTLE 296
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +2
Query: 314 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 463
V ++ F+ G +VS LCR+WD + + +L + + + +FS
Sbjct: 187 VKSLTFSESGKFLVSLGAP-LCRVWDVNASAAIASLSKEKDEMFASCRFS 235
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +3
Query: 42 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK--CLKTLK 173
I HK ++ + S ++S S DKT++VW++ GK C + +K
Sbjct: 891 IKEHKSTVTCFSLSETGECVLSGSADKTIRVWQIVKGKLECAEVIK 936
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/86 (22%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Frame = +3
Query: 6 IWGAYDGKFEK--TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL-KG 176
+W A G + TI K ++ + W+ D + D+ +++W+ S + ++TL G
Sbjct: 147 LWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDFVSNRQVRTLIGG 206
Query: 177 HSNYVFCCNFNPQSNLIVSGSFDESV 254
H + V +N ++++ +G D +
Sbjct: 207 HESRVGSLAWN--NHILTTGGMDGKI 230
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/59 (23%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +2
Query: 254 WIWDVRTGKCLKPLPAHSD--PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 424
++WD +G + + D PV+++++ +DG + + ++WD S + ++TLI
Sbjct: 146 YLWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDFVSNRQVRTLI 204
Score = 30.7 bits (66), Expect = 1.0
Identities = 23/92 (25%), Positives = 36/92 (39%), Gaps = 1/92 (1%)
Frame = +2
Query: 260 WDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSY-DGLCRIWDTASGQCLKTLIDDDN 436
W+ TG CL + S S + R+ L+ S + +W S + L +
Sbjct: 328 WNTHTGACLNSVETGSQVCSLLWSQRERELLSSHGFTQNQLTLWKYPSMSKMAEL-NGHT 386
Query: 437 PPVSFVKFSPNGKYILAATLDNTLNYGTIAEE 532
V F+ SPNG + +A D L + E
Sbjct: 387 SRVLFMAQSPNGCTVASAAGDENLRLWNVFGE 418
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/86 (20%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD--DKTLKVWELSSGKCLKTLKG 176
K W + G ++ + + WS R ++S+ L +W+ S + L G
Sbjct: 326 KFWNTHTGACLNSVETGSQ-VCSLLWSQRERELLSSHGFTQNQLTLWKYPSMSKMAELNG 384
Query: 177 HSNYVFCCNFNPQSNLIVSGSFDESV 254
H++ V +P + S + DE++
Sbjct: 385 HTSRVLFMAQSPNGCTVASAAGDENL 410
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 33.5 bits (73), Expect = 0.15
Identities = 20/71 (28%), Positives = 35/71 (49%)
Frame = +3
Query: 27 KFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF 206
+ EK++ H + + S +I S+SDD T+ +W+LSS ++ L S V
Sbjct: 3315 RLEKSLCAHTAKVICLRVSQPYMMIASSSDDCTVIIWDLSSLSFVRQLPNFSVPVTVVYI 3374
Query: 207 NPQSNLIVSGS 239
N + IV+ +
Sbjct: 3375 NDLTGEIVTAA 3385
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 421
IWD+ + ++ LP S PV+ V+ N IV+++ + +W + +G CL +
Sbjct: 3350 IWDLSSLSFVRQLPNFSVPVTVVYINDLTGEIVTAA-GSVLAVW-SINGDCLSVV 3402
>At1g76260.1 68414.m08855 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to retinoblastoma A associated protein; RbAp48
(GI:3309245) [Xenopus laevis]
Length = 350
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +3
Query: 96 LIVSASDDKTLKVWELSSGKC-LKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESV 254
++VSA D+ + +W+L K ++ L GH+++ + NP+ LI+S D +V
Sbjct: 223 ILVSADDESGIHLWDLRKTKFPVQELPGHTHWTWAVRCNPEYEELILSVGTDSAV 277
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 613 IVSGSEDNLVYIWNLQSKEI-VQRLSGHTDTVLCTACHP 726
+VS +++ +++W+L+ + VQ L GHT C+P
Sbjct: 224 LVSADDESGIHLWDLRKTKFPVQELPGHTHWTWAVRCNP 262
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 33.1 bits (72), Expect = 0.19
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Frame = +1
Query: 526 RGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW------NLQSKEIVQRLS 687
R ++TY GH E+ C +S +G K SG DN+V+IW + Q+++ + R
Sbjct: 241 RSSIVETYLGH-TEEVCGL-KWSESGNKQ-ASGGNDNVVHIWDRSLASSKQTRQWLHRFE 297
Query: 688 GHTDTVLCTACHP 726
HT V A P
Sbjct: 298 EHTAAVRALAWCP 310
Score = 32.7 bits (71), Expect = 0.26
Identities = 18/86 (20%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Frame = +3
Query: 6 IWGAYDGKFEK--TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK-G 176
+W A G + TI K ++ + W+ D + D+ +++W+ S + ++TL+ G
Sbjct: 150 LWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDCVSNRQVRTLRGG 209
Query: 177 HSNYVFCCNFNPQSNLIVSGSFDESV 254
H + V ++ ++++ +G D +
Sbjct: 210 HESRVGSLAWD--NHILTTGGMDGKI 233
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/86 (20%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD--DKTLKVWELSSGKCLKTLKG 176
K W + G ++ + + WS R ++S+ L +W+ S + L G
Sbjct: 328 KFWNTHTGACLNSVETGSQ-VCSLLWSQSERELLSSHGFTQNQLTLWKYPSMSKMAELNG 386
Query: 177 HSNYVFCCNFNPQSNLIVSGSFDESV 254
H++ V +P + S + DE++
Sbjct: 387 HTSRVLFMAQSPNGCTVASAAGDENL 412
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/58 (22%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 254 WIWDVRTGKCLKPLPAHSD--PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 421
++WD +G + + D PV+++++ +DG + + ++WD S + ++TL
Sbjct: 149 YLWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDCVSNRQVRTL 206
Score = 28.3 bits (60), Expect = 5.5
Identities = 22/92 (23%), Positives = 35/92 (38%), Gaps = 1/92 (1%)
Frame = +2
Query: 260 WDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSY-DGLCRIWDTASGQCLKTLIDDDN 436
W+ TG CL + S S + + L+ S + +W S + L +
Sbjct: 330 WNTHTGACLNSVETGSQVCSLLWSQSERELLSSHGFTQNQLTLWKYPSMSKMAEL-NGHT 388
Query: 437 PPVSFVKFSPNGKYILAATLDNTLNYGTIAEE 532
V F+ SPNG + +A D L + E
Sbjct: 389 SRVLFMAQSPNGCTVASAAGDENLRLWNVFGE 420
>At5g14050.1 68418.m01644 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to unknown protein (ref|NP_057085.1)
Length = 546
Score = 33.1 bits (72), Expect = 0.19
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +2
Query: 314 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 493
V ++ F+ DG ++SS DG +WD + +CL +D+ + + + S NG + T
Sbjct: 377 VRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLYKGVDEGSTCGTSLCSSLNGALFASGT 436
Score = 29.9 bits (64), Expect = 1.8
Identities = 25/97 (25%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Frame = +2
Query: 248 ECWIWDVRTGKCL-KPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS--GQCLKT 418
+ ++WD+RT KCL K + S +++ + +G+L S + G+ I+ + G K
Sbjct: 397 QVYVWDLRTMKCLYKGVDEGSTCGTSLCSSLNGALFASGTDRGIVNIYKKSEFVGGKRKP 456
Query: 419 L--IDDDNPPVSFVKFSPNGKYILAATLDNTLNYGTI 523
+ +D+ + F+KF+ + + ILA + +T+N ++
Sbjct: 457 IKTVDNLTSKIDFMKFNHDAQ-ILA--IVSTMNKNSV 490
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +3
Query: 63 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCL 161
+ +A+S D + ++S+ D + VW+L + KCL
Sbjct: 377 VRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCL 409
>At4g00800.1 68417.m00110 expressed protein contains 1 WD-40 repeat
(PF00400); 42% similarity to fimbriae-associated protein
Fap1 (gi:3929312) [Streptococcus parasanguinis]
Length = 994
Score = 33.1 bits (72), Expect = 0.19
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 311 PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 445
PV++V FN+ GSL+++ DG +WD K + + P V
Sbjct: 480 PVTSVCFNQIGSLLLAGYGDGHVTVWDMQRASIAKVITEHTAPVV 524
>At3g49400.1 68416.m05400 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400); low
similarity (47%) to Agamous-like MADS box protein AGL5
(SP:P29385) {Arabidopsis thaliana}
Length = 892
Score = 33.1 bits (72), Expect = 0.19
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +3
Query: 27 KFEKTIS--GHKMGISDVAWSSDSRLIVSASDDKTLKVWEL 143
KFE+ +S H ++ +AWS D R + S S D ++ W L
Sbjct: 425 KFEQIVSTNAHNQVVTGLAWSYDGRCLYSCSQDNYVRSWIL 465
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 33.1 bits (72), Expect = 0.19
Identities = 15/63 (23%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = +3
Query: 36 KTISGHKMGISDVAWSS-DSRLIVSASDDKTLKVWELSSGKCLKTLK---GHSNYVFCCN 203
K++ GH ++++ +L+++AS D+++++W + +G C+ GH V +
Sbjct: 122 KSLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNVETGICILIFAGAGGHRYEVLSVD 181
Query: 204 FNP 212
F+P
Sbjct: 182 FHP 184
Score = 29.5 bits (63), Expect = 2.4
Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 4/93 (4%)
Frame = +2
Query: 263 DVRTGKCLKPLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTL--IDDD 433
DV + K L H D V+ + L++++S D R+W+ +G C+
Sbjct: 114 DVNSETIHKSLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNVETGICILIFAGAGGH 173
Query: 434 NPPVSFVKFSPNGKYILAAT-LDNTLNYGTIAE 529
V V F P+ Y A+ +D T+ ++ E
Sbjct: 174 RYEVLSVDFHPSDIYRFASCGMDTTIKIWSMKE 206
>At3g52190.1 68416.m05731 transducin family protein / WD-40 repeat
family protein similar to St12p protein (GI:166878)
{Arabidopsis thaliana}; contains Pfam profile: PF00400
WD domain, G-beta repeat
Length = 398
Score = 32.7 bits (71), Expect = 0.26
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 299 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 472
AH + + F+ D + ++S DG RIW G L TL + + +FS +G
Sbjct: 163 AHKS-IRDMDFSLDSEFLATTSTDGSARIWKAEDGFPLSTLERSGDENIELCRFSKDG 219
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/70 (22%), Positives = 34/70 (48%)
Frame = +2
Query: 302 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 481
HS V+ ++F+ DG+ + S +G+ +W +G+ K + P+ + +SP+
Sbjct: 282 HSAEVNVLNFSSDGAYLYSGGREGVLVVWQLDTGK--KKFLPRIGSPLLYFMWSPDPTLS 339
Query: 482 LAATLDNTLN 511
DN ++
Sbjct: 340 SVVCADNQIH 349
Score = 28.3 bits (60), Expect = 5.5
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +2
Query: 302 HSDP-VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 478
H D VSA+ F+ S+ VS+S+ G +IW S K D D+ + S K
Sbjct: 483 HRDAGVSAIVFHPTRSMAVSTSFGGDFKIWVCNSD---KNQTDKDSSWICHAVGSYKKKP 539
Query: 479 ILAATLDNTLNYGTIAEENV 538
+ AA +A ENV
Sbjct: 540 MTAAAFSGDGTVMAVAAENV 559
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 32.3 bits (70), Expect = 0.34
Identities = 16/73 (21%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +3
Query: 39 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK-GHSNYVFCCNFNPQ 215
TI ++ + W+ D + D+ ++VW+ S + ++TL+ GH + V +N
Sbjct: 147 TIDDENGPVTSINWTQDGLDLAVGLDNSEVQVWDCVSNRHVRTLRGGHESRVGSLAWN-- 204
Query: 216 SNLIVSGSFDESV 254
++++ +G D +
Sbjct: 205 NHILTTGGMDGKI 217
Score = 31.5 bits (68), Expect = 0.59
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Frame = +1
Query: 526 RGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ------SKEIVQRLS 687
R + TY GH E+ C +S +G K + SG DN+V+IW+ +++ + R
Sbjct: 225 RSSIIGTYVGH-TEEVCGL-KWSESGKK-LASGGNDNVVHIWDRSLASSNPTRQWLHRFE 281
Query: 688 GHTDTVLCTACHP 726
HT V A P
Sbjct: 282 EHTAAVRALAWCP 294
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 42 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK 173
++GH + +A S D + SA+ D+TL++W + G+ KT K
Sbjct: 368 LNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNV-FGEPPKTTK 410
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +2
Query: 383 IWDTASGQCLKTL-IDDDNPPVSFVKFSPNGKYILAATLDNT 505
+WD +S K + IDD+N PV+ + ++ +G LA LDN+
Sbjct: 134 LWDASSCYTSKLVTIDDENGPVTSINWTQDG-LDLAVGLDNS 174
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/84 (21%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Frame = +3
Query: 9 WGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD--DKTLKVWELSSGKCLKTLKGHS 182
W + G ++ + + WS R ++SA L +W+ S + L GH+
Sbjct: 314 WNTHTGACLNSVETGSQ-VCSLLWSKSERELLSAHGFTQNQLTLWKYPSMVKMAELNGHT 372
Query: 183 NYVFCCNFNPQSNLIVSGSFDESV 254
+ V +P + S + DE++
Sbjct: 373 SRVLFMAQSPDGCTVASAAGDETL 396
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/36 (25%), Positives = 17/36 (47%)
Frame = +3
Query: 39 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELS 146
T GH + + WS + + S +D + +W+ S
Sbjct: 231 TYVGHTEEVCGLKWSESGKKLASGGNDNVVHIWDRS 266
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 32.3 bits (70), Expect = 0.34
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +3
Query: 42 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELS 146
+ GHK ++ + +S +S I++AS D +++VW ++
Sbjct: 285 LKGHKSAVTWLCFSPNSEQIITASKDGSIRVWNIN 319
Score = 31.1 bits (67), Expect = 0.78
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 284 LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW--DTASGQCLKTL 421
L L H D V+ + F+ DG + ++ DG+ R++ D AS + K L
Sbjct: 79 LNTLKGHGDAVTGLCFSSDGKSLATACADGVIRVFKLDDASSKSFKFL 126
Score = 30.7 bits (66), Expect = 1.0
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Frame = +3
Query: 6 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKC--------L 161
+W G+ + +++ A S + R + +A+ +KVWE+ K +
Sbjct: 223 LWHGKTGRNLGHVDTNQLKNHMAAVSPNGRFLAAAAFTADVKVWEIVYQKDGSVKEVSRV 282
Query: 162 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 254
LKGH + V F+P S I++ S D S+
Sbjct: 283 MQLKGHKSAVTWLCFSPNSEQIITASKDGSI 313
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +3
Query: 39 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL--SSGKCLKTLK 173
T+ GH ++ + +SSD + + +A D ++V++L +S K K L+
Sbjct: 81 TLKGHGDAVTGLCFSSDGKSLATACADGVIRVFKLDDASSKSFKFLR 127
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 32.3 bits (70), Expect = 0.34
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 421
+W + L + H PVS+V F+ +G L+ +S + +IWD + ++T+
Sbjct: 265 MWKPTSQAPLVQMQCHPGPVSSVAFHPNGHLMATSGKERKIKIWDLRKFEEVQTI 319
>At3g26480.1 68416.m03301 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (5 copies, 2 below cutoff); related to
LACK protective antigen (GI:13625467) [Leishmania
donovani]
Length = 764
Score = 31.9 bits (69), Expect = 0.45
Identities = 18/70 (25%), Positives = 34/70 (48%)
Frame = +2
Query: 302 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 481
HS V+ ++F+ DG+L+ S G +W+ +G+ K L+ P+ + FS +
Sbjct: 245 HSAEVTVLNFSSDGALLYSGVKAGDFVVWELGTGK--KQLLPKIGSPLLYFIFSSDSTLS 302
Query: 482 LAATLDNTLN 511
DN ++
Sbjct: 303 SVICADNQIH 312
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 39 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK 155
T + H ++ + +SSD L+ S VWEL +GK
Sbjct: 241 TFNWHSAEVTVLNFSSDGALLYSGVKAGDFVVWELGTGK 279
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 31.9 bits (69), Expect = 0.45
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 27 KFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSS 149
+ EK + H ++ + S +I S SDD T+ +W+LSS
Sbjct: 3371 RLEKALCAHTAKVTCLRVSQPYMMIASGSDDCTVIIWDLSS 3411
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 412
IWD+ + ++ LP P+SA++ N IV+++ L +W + +G CL
Sbjct: 3406 IWDLSSLSFVRQLPDFPVPISAIYINDLTGEIVTAAGTVLA-VW-SINGDCL 3455
>At5g05150.1 68418.m00547 transport protein-related contains 2 WD-40
repeats (PF00400); similar to transport protein Gsa12p
(GI:18307769) [Pichia pastoris]
Length = 374
Score = 31.5 bits (68), Expect = 0.59
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Frame = +2
Query: 284 LKPLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIWDTASGQCLKTLIDD-DNPPVSFVK 457
+K + AH ++ + DGSL+ ++S G L RI++ G L+ + + V
Sbjct: 197 IKFIKAHDSAIACMTLTLDGSLLATASTKGTLIRIFNAVDGTLLQEFRRGVERAEIYNVA 256
Query: 458 FSPNGKYILAATLDNTLN 511
S N K++ A++ TL+
Sbjct: 257 ISSNLKWVAASSEKGTLH 274
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 31.5 bits (68), Expect = 0.59
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 63 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK 173
I DVA S L+V+ DK + ++++ SGK +++ K
Sbjct: 529 IYDVAVDPTSGLVVTVGQDKKINIFDIESGKLVRSFK 565
>At3g13300.2 68416.m01675 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1309
Score = 31.1 bits (67), Expect = 0.78
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = +2
Query: 350 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF 460
+VSSS DG +IW Q L L D PVS F
Sbjct: 337 LVSSSVDGTIKIWQDRKAQPLVVLRPHDGHPVSSATF 373
>At3g13300.1 68416.m01674 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1344
Score = 31.1 bits (67), Expect = 0.78
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = +2
Query: 350 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF 460
+VSSS DG +IW Q L L D PVS F
Sbjct: 372 LVSSSVDGTIKIWQDRKAQPLVVLRPHDGHPVSSATF 408
>At2g25420.1 68415.m03045 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (3 repeats)
Length = 717
Score = 31.1 bits (67), Expect = 0.78
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +3
Query: 27 KFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF 206
K ++ + GH I+ +A+S ++VS+ D L +W S+ +K +S FC
Sbjct: 502 KVKEKLEGHDQKITCLAFSRCFNVLVSSDSDGKLCLW--STKSWVKLTSKNSTRKFCNRS 559
Query: 207 NPQSNLIVS 233
N +S +V+
Sbjct: 560 NLESTSLVT 568
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +3
Query: 96 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 245
L+ DD ++ + LSS K + L+GH + C F+ N++VS D
Sbjct: 483 LLAVGLDDGSIFIHCLSSRKVKEKLEGHDQKITCLAFSRCFNVLVSSDSD 532
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +1
Query: 604 GKWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTA 717
G + G +D ++I L S+++ ++L GH + C A
Sbjct: 481 GDLLAVGLDDGSIFIHCLSSRKVKEKLEGHDQKITCLA 518
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 278 KCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 400
K + L H ++ + F+R +++VSS DG +W T S
Sbjct: 502 KVKEKLEGHDQKITCLAFSRCFNVLVSSDSDGKLCLWSTKS 542
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 31.1 bits (67), Expect = 0.78
Identities = 11/39 (28%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 613 IVSGSEDNLVYIWNLQSKEI-VQRLSGHTDTVLCTACHP 726
+V+ +++ +++W+L+ ++ VQ L GHT C+P
Sbjct: 224 LVTAEDESGIHVWDLRKAKVPVQELPGHTHWTWAVRCNP 262
Score = 27.9 bits (59), Expect = 7.3
Identities = 18/72 (25%), Positives = 39/72 (54%)
Frame = +3
Query: 36 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 215
K +G +S AW V+A+ + +++ W+L + K + +++ H+ +V ++NP+
Sbjct: 162 KDSAGMLHSLSGGAWDPHDVNAVAATGESSVQFWDLRTMKKVNSIE-HA-HVRGVDYNPK 219
Query: 216 SNLIVSGSFDES 251
I+ + DES
Sbjct: 220 REHILVTAEDES 231
>At1g03380.1 68414.m00317 expressed protein
Length = 926
Score = 31.1 bits (67), Expect = 0.78
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +2
Query: 263 DVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDG 373
D+ +G + AH+ P+SA+ F+ G+L+V++S G
Sbjct: 364 DLVSGALVSQFKAHTSPISALCFDPSGTLLVTASVCG 400
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/37 (40%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Frame = +3
Query: 87 DSRLIVSASDDKTLKVWELSSGKCLK--TLKGHSNYV 191
+S L+VS+S DKTL++W+L + +KGH++ V
Sbjct: 464 ESHLLVSSSLDKTLRIWDLRKSWTPQPFVVKGHNDGV 500
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2
Query: 248 ECWIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 391
+C ++D+R + AH V+ + + L+VSSS D RIWD
Sbjct: 435 QCRLFDLRENGFISSWRAHDGYVTKL-VAPESHLLVSSSLDKTLRIWD 481
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/47 (23%), Positives = 24/47 (51%)
Frame = +3
Query: 42 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
+ GH+ + DV++ L+ + S D L++W+ + + + HS
Sbjct: 13 LRGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHS 59
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +3
Query: 51 HKMGISDVAWSSDSRLIVSASDDKTLKVWEL 143
H+ + V++S D L+ SAS+D T+ +W+L
Sbjct: 349 HRATCNAVSYSPDCELMASASEDATVALWKL 379
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 36 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK 155
+ I H+ ++ VA S D S S D T+ W++SSGK
Sbjct: 139 RVIVKHQHSVTGVALSDDDSRGFSVSKDGTILHWDVSSGK 178
>At5g54730.1 68418.m06815 expressed protein
Length = 763
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 263 DVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDG 373
D+ + AH P+SA+ F++ G L+V++S G
Sbjct: 333 DITNKSVITQFKAHKSPISALCFDQSGLLLVTASIQG 369
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 302 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 409
H D VSAV+ I++ YDGL R+W +A G C
Sbjct: 109 HDDWVSAVN-GSSPRFILTGCYDGLGRVWSSA-GSC 142
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +3
Query: 21 DGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK 155
+G+ ++ GH +S V W +I S+S D +++ W++ +GK
Sbjct: 261 EGEAVTSLVGHTQCVSSVVWPEHD-VIYSSSWDHSVRRWDVETGK 304
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +2
Query: 278 KCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 394
+ K L H V +V + G+++ SSS+D +W+T
Sbjct: 196 RAYKILRGHKASVQSVSAQKSGNMVCSSSWDCTINLWNT 234
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = +2
Query: 257 IWDVRTGKCLKPL---PAHSDPVSAVHFNRDGSL-IVSSSYDGLCRIWD 391
+WD R P+ +HS +SA +++ ++S+SYDG +WD
Sbjct: 339 VWDPRKPGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASYDGKIMLWD 387
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +3
Query: 36 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVW 137
K + GHK + V+ ++ S+S D T+ +W
Sbjct: 199 KILRGHKASVQSVSAQKSGNMVCSSSWDCTINLW 232
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 302 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 409
H D VSAV+ I++ YDGL R+W +A G C
Sbjct: 109 HDDWVSAVN-GSSPRFILTGCYDGLGRVWSSA-GSC 142
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +3
Query: 21 DGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK 155
+G+ ++ GH +S V W +I S+S D +++ W++ +GK
Sbjct: 261 EGEAVTSLVGHTQCVSSVVWPEHD-VIYSSSWDHSVRRWDVETGK 304
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +2
Query: 257 IWDVRTGKCLKPL---PAHSDPVSAVHFNRDGSL-IVSSSYDGLCRIWDTASGQCLKTLI 424
+WD R P+ +HS +SA +++ ++S+SYDG +WD + L ++I
Sbjct: 339 VWDPRKPGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASYDGKIMLWDLRTAWPL-SVI 397
Query: 425 DDDNPPV 445
D N V
Sbjct: 398 DTHNDKV 404
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +3
Query: 45 SGHKMGISDVAWSSDSRL-IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 221
S H IS W S ++SAS D + +W+L + L + H++ V ++ +
Sbjct: 355 SSHSSWISACKWHKSSWFHLLSASYDGKIMLWDLRTAWPLSVIDTHNDKVLSADW-WKGE 413
Query: 222 LIVSGSFDESV 254
+VSG D ++
Sbjct: 414 SVVSGGADSNL 424
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +2
Query: 278 KCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 394
+ K L H V +V + G+++ SSS+D +W+T
Sbjct: 196 RAYKILRGHKASVQSVSAQKSGNMVCSSSWDCTINLWNT 234
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +3
Query: 36 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVW 137
K + GHK + V+ ++ S+S D T+ +W
Sbjct: 199 KILRGHKASVQSVSAQKSGNMVCSSSWDCTINLW 232
>At5g12920.1 68418.m01482 expressed protein contains 3 weak WD-40
repeats (PF00400); low similarity to MEK kinase alpha
(GI:4028547); transcriptional repressor TUP1
(GI:3406654) [Dictyostelium discoideum]; Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (TGF-beta receptor interacting protein 1)
(TRIP-1) (SP:Q38884) [Arabidopsis thaliana]
Length = 442
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +2
Query: 257 IWDVRTG--KCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 406
+WD R G C++ D + ++ D I + +G+ IWD G+
Sbjct: 177 VWDRRAGVSPCIELSTDRYDSIKSIQIYVDNQTIFGAGKEGIIHIWDLRGGR 228
>At4g13310.2 68417.m02080 cytochrome P450 71A20, putative (CYP71A20)
Identical to Cytochrome P450 (SP:Q9T0K2) [Arabidopsis
thaliana]; similar to cytochrome P450 71A4, Solanum
melongena, PIR2:S36805
Length = 390
Score = 30.3 bits (65), Expect = 1.4
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 12/125 (9%)
Frame = +2
Query: 266 VRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSS--YDGLCRIWDTASGQCLKT-LIDDDN 436
+ T + L+ L P+ +HF R LIVSS+ + + D KT ++D
Sbjct: 50 LHTHRSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDVMKTHDLVCANRPKTKVVDKIL 109
Query: 437 PPVSFVKFSPNGKY---ILAATLDNTLN------YGTIAEENV*RHIRDTRTKNIVSLPT 589
V F+P G+Y + + + N LN Y I EE + R I + S P+
Sbjct: 110 SGGRDVAFAPYGEYWRQMKSICIQNLLNNKMVRSYEKIREEEIKRMIEKLEKASCSSSPS 169
Query: 590 LVSLA 604
V+L+
Sbjct: 170 PVNLS 174
>At4g13310.1 68417.m02081 cytochrome P450 71A20, putative (CYP71A20)
Identical to Cytochrome P450 (SP:Q9T0K2) [Arabidopsis
thaliana]; similar to cytochrome P450 71A4, Solanum
melongena, PIR2:S36805
Length = 497
Score = 30.3 bits (65), Expect = 1.4
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 12/125 (9%)
Frame = +2
Query: 266 VRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSS--YDGLCRIWDTASGQCLKT-LIDDDN 436
+ T + L+ L P+ +HF R LIVSS+ + + D KT ++D
Sbjct: 50 LHTHRSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDVMKTHDLVCANRPKTKVVDKIL 109
Query: 437 PPVSFVKFSPNGKY---ILAATLDNTLN------YGTIAEENV*RHIRDTRTKNIVSLPT 589
V F+P G+Y + + + N LN Y I EE + R I + S P+
Sbjct: 110 SGGRDVAFAPYGEYWRQMKSICIQNLLNNKMVRSYEKIREEEIKRMIEKLEKASCSSSPS 169
Query: 590 LVSLA 604
V+L+
Sbjct: 170 PVNLS 174
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLI-VSSSY 367
IWD K L + +SA+ F+RDG L+ V+SSY
Sbjct: 267 IWDGNNKKRLYQYSKYPTSISALSFSRDGQLLAVASSY 304
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Frame = +3
Query: 33 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSS---GKCLKTLKGHSNYVFCCN 203
+K +GH I DV + + +AS D T+K+ +S+ + L TL GH V+
Sbjct: 4 QKIETGHSDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVWQVA 63
Query: 204 F-NPQ-SNLIVSGSFDESV 254
+ +P+ +L+ S S+D +
Sbjct: 64 WAHPKFGSLLASCSYDGQI 82
>At4g33400.1 68417.m04747 dem protein-related / defective embryo and
meristems protein-related identical to dem GI:2190419
from [Lycopersicon esculentum]
Length = 645
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +2
Query: 338 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 493
DGS++V S DG R++ + + + KT PV+ V + +GK+I+ T
Sbjct: 443 DGSIVVGS-LDGKIRLYSSNTMRQAKTAFPGLGAPVTHVDATFDGKWIVGTT 493
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/92 (21%), Positives = 39/92 (42%), Gaps = 9/92 (9%)
Frame = +3
Query: 6 IWGAYDGK--FEKTISGHKMGISDVAWSS-DSRLIVSASDDKTLKVWELSS------GKC 158
+W A G K H + V W+ D LI++ S D T+++++ G
Sbjct: 319 LWDARTGTNPVTKVEKAHDADLHCVDWNPHDDNLILTGSADNTVRLFDRRKLTANGVGSP 378
Query: 159 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 254
+ +GH V C ++P + + S ++ +
Sbjct: 379 IYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGL 410
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 48 GHKMGISDVAWSSD-SRLIVSASDDKTLKVWE 140
GHK + V WS D S + S+++D L +W+
Sbjct: 384 GHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 415
>At5g07590.1 68418.m00870 WD-40 repeat protein family contains 3
WD-40 repeats (PF00400); similarity to WD-repeat protein
8 (WDR8)(SP:Q9P2S5] [HOMO SAPIENS]
Length = 458
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 9 WGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD-DKTLKVWELSSGKCL 161
W ++ I GIS WS DSR I++ S+ L VW L + C+
Sbjct: 75 WSLTQPEWTCKIDEGPAGISYARWSPDSRHILTTSEFQLRLTVWSLLNTACV 126
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +2
Query: 287 KPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 400
+ LP S +V ++ D I S S DGL R WD S
Sbjct: 192 RSLPRVSGRALSVTWSPDAKRIFSGSSDGLIRCWDATS 229
Score = 28.3 bits (60), Expect = 5.5
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 11/72 (15%)
Frame = +3
Query: 72 VAWSSDSRLIVSASDDKTLKVWELSSG----KCLKTLKGH-----SNYVFCC--NFNPQS 218
+A SSD + +A +D +L++W +S G C T+ G S+ +CC + S
Sbjct: 19 LANSSDDSQVAAAREDGSLEIWLVSPGAVGWHCQLTIHGDPNSRISSLAWCCSPSIGLPS 78
Query: 219 NLIVSGSFDESV 254
+ S S D S+
Sbjct: 79 GRLFSSSIDGSI 90
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 72 VAWSSDSRLIVSASDDKTLKVWELSS 149
V WS D++ I S S D ++ W+ +S
Sbjct: 204 VTWSPDAKRIFSGSSDGLIRCWDATS 229
>At3g52030.1 68416.m05707 F-box family protein / WD-40 repeat family
protein
Length = 454
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 260 WDVRTGKCLKPLPAHSDPVSAVH-FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 433
WD+R L + V ++ D S++V+ DG+ R+ D SG+ L +I DD
Sbjct: 330 WDLRKMDRLWEKRVSPNVVYSIQQLRNDTSVMVAGGIDGVLRMIDQKSGRVLSRVIMDD 388
>At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,
putative 99.8% identical to St12p protein (GI:166878)
{Arabidopsis thaliana}
Length = 393
Score = 29.5 bits (63), Expect = 2.4
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 27 KFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK-GHSNYVFCCN 203
K+ K I K IS S+D +L+ + + + + E + + ++ +K H V
Sbjct: 278 KWSKPIK--KNSISAFNVSADGKLLAIGTLEGDVLILESTRMQTIQVVKKAHLGLVTALT 335
Query: 204 FNPQSNLIVSGSFDESVGYGM*EQ 275
F+P S +VS SFD M EQ
Sbjct: 336 FSPDSRGLVSVSFDSRARLTMIEQ 359
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +2
Query: 299 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 463
AHS V + F+ G +VS +CR+WD + + +L + + + +FS
Sbjct: 194 AHSS-VKCLTFSESGQFLVSLG-GPVCRVWDVNASAAVASLSKEKDEMFASCRFS 246
>At3g26640.1 68416.m03329 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to ATAN11 (GI:2290528) [Arabidopsis thaliana]
(Genes Dev. 11 (11), 1422-1434 (1997)); contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies)
Length = 346
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 51 HKMGISDVAWSSDSRL-IVSASDDKTLKVWELSS 149
H+ ++ +AW+ S I SA DD +W++SS
Sbjct: 266 HQASVNAIAWAPHSSSHICSAGDDSQALIWDISS 299
>At3g08850.1 68416.m01029 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein mip1
(SP:P87141) [Schizosaccharomyces pombe]; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies, 1 weak)
Length = 1344
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Frame = +3
Query: 39 TISGHKMGISD----VAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 182
+I GHK G D V W S + ++ + T+ +W+L + ++++ S
Sbjct: 1118 SIQGHKPGARDLNAVVDWQQQSGYLYASGETSTVTLWDLEKEQLVRSVPSES 1169
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 257 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLI-VSSSY 367
IWD K L + ++A+ F+RDG L+ V+SSY
Sbjct: 266 IWDGNNKKRLYQYSKYPTSIAALSFSRDGGLLAVASSY 303
>At1g49610.1 68414.m05562 F-box family protein contains F-box domain
Pfam:PF00646
Length = 354
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 450 NETGGLSSSIRVLRHCPEAVSQIRHKPS-*LEETIRL 343
N GG S+S+RVL+HC E V I P L+E + L
Sbjct: 7 NRDGG-SASVRVLKHCLEDVDSISSLPDVILQENLSL 42
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 28.7 bits (61), Expect = 4.2
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Frame = +3
Query: 33 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSS---GKCLKTLKGHSNYVFCCN 203
+K +GH+ + DV + I +AS D T+K+ +S+ + L TL GH V+
Sbjct: 4 QKIETGHEDIVHDVQMDYYGKRIATASSDCTIKITGVSNNGGSQQLATLTGHRGPVWEVA 63
Query: 204 F-NPQ-SNLIVSGSFDESV 254
+ +P+ +++ S S+D V
Sbjct: 64 WAHPKYGSILASCSYDGQV 82
>At1g54710.1 68414.m06237 expressed protein contains 3 WD-40 repeats
(PF00400) (1 weak) submitForm();
Length = 927
Score = 28.7 bits (61), Expect = 4.2
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 299 AHSDPVSAVHFNRDGSLIVSSSYDG 373
AH+ P+SA+ F+ G+L+V++S G
Sbjct: 379 AHTSPISALCFDPSGTLLVTASIHG 403
>At1g08190.1 68414.m00905 vacuolar assembly protein, putative
(VPS41) 99.8% identical to Vacuolar assembly protein
VPS41 homolog (SP:P93043) [Arabidopsis thaliana];
similar to vacuolar assembly protein vps41 GI:1835787
from [Lycopersicon esculentum]
Length = 980
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 275 GKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDG 373
G +K AH+ PV+ ++F+ +G I S S DG
Sbjct: 88 GNQVKEFRAHTAPVNDINFDTEGEYIGSCSDDG 120
>At1g12910.1 68414.m01499 flower pigmentation protein (AN11)
contains 3 WD-40 repeats (PF00400); identical to
GB:AAC18912 from [Arabidopsis thaliana] (Genes Dev. 11
(11), 1422-1434 (1997))
Length = 346
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 51 HKMGISDVAWSSDSRL-IVSASDDKTLKVWELSS 149
H+ ++ +AW+ S I +A DD +W++SS
Sbjct: 266 HQASVNAIAWAPHSSCHICTAGDDSQALIWDISS 299
>At4g11270.1 68417.m01823 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TGF-beta resistance-associated protein TRAG
(GI:15624071) {Mus musculus}; similar to
beta-transducin repeats containing protein - Homo
sapiens,PID:e1284220; 3' EST no_NP:TC8031
Length = 1446
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1
Query: 676 QRLSGHTDTVLCTACH 723
QRL GHT +VLC A H
Sbjct: 522 QRLLGHTGSVLCLAAH 537
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 99 IVSASDDKTLKVWELSSGKCLKTLK 173
++SA D L VW SSG+C K K
Sbjct: 108 LISACTDGVLCVWSRSSGQCRKRRK 132
>At3g20620.1 68416.m02609 F-box family protein-related contains weak
hit to TIGRFAM TIGR01640 : F-box protein interaction
domain; similar to F-box protein family, AtFBX8
(GI:20197464) [Arabidopsis thaliana]
Length = 391
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +3
Query: 27 KFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL 170
++ KT+S H + +S L+V S KT+K++ + + +C +L
Sbjct: 30 RYCKTVSKHLAKLQLAESGKNSSLVVCPSMGKTMKLYSMDAKRCKLSL 77
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1322
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +2
Query: 350 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF 460
+VSSS DG +IW Q L L D PV+ F
Sbjct: 356 LVSSSVDGTVKIWQDRKTQPLVVLRPHDGLPVNSAIF 392
>At3g05620.1 68416.m00624 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 543
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 672 CTEVVWTHGYSSLHGLPPH 728
C +WTH S HGL PH
Sbjct: 50 CVSNIWTHVKESGHGLNPH 68
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 21 DG-KFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL 143
DG K +T GH ++ +A S D+ +V+ S D T+ +W +
Sbjct: 2656 DGAKTLETAFGHCAPVTCLALSPDNNFLVTGSRDSTVLLWRI 2697
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,245,294
Number of Sequences: 28952
Number of extensions: 380041
Number of successful extensions: 2957
Number of sequences better than 10.0: 252
Number of HSP's better than 10.0 without gapping: 1189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2752
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1594686376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -