Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0831
         (684 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g16110.1 68414.m01931 wall-associated kinase, putative contai...    33   0.18 
At1g10340.2 68414.m01165 ankyrin repeat family protein contains ...    29   2.2  
At1g10340.1 68414.m01164 ankyrin repeat family protein contains ...    29   2.2  
At1g68270.1 68414.m07798 AMP-dependent synthetase and ligase fam...    29   2.9  
At5g04540.1 68418.m00454 expressed protein                             28   5.0  
At1g65880.1 68414.m07476 AMP-dependent synthetase and ligase fam...    28   5.0  
At1g57870.1 68414.m06566 shaggy-related protein kinase kappa, pu...    28   5.0  
At4g09980.1 68417.m01634 methyltransferase MT-A70 family protein...    28   6.6  
At3g24870.1 68416.m03119 expressed protein                             28   6.6  
At1g65890.1 68414.m07477 acyl-activating enzyme 12 (AAE12) simil...    28   6.6  

>At1g16110.1 68414.m01931 wall-associated kinase, putative contains
           similarity to wall-associated kinase 2 GI:4826399 from
           [Arabidopsis thaliana]
          Length = 642

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 17/54 (31%), Positives = 23/54 (42%)
 Frame = -3

Query: 661 LPRFKTYSGFCFLRESIMVLNFIRTSLLSRAKPSTDDSSNFVLPVAASVSIPMP 500
           + + KTY  FC    S++ L  I  S  +   P   +SS         VSIP P
Sbjct: 1   MKKTKTYQVFCIAALSVLTLQLINGSSAATPPPPNSNSSTSCNRACGGVSIPFP 54


>At1g10340.2 68414.m01165 ankyrin repeat family protein contains
           ankyrin repeat domains, Pfam:PF00023
          Length = 574

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 22/57 (38%), Positives = 30/57 (52%)
 Frame = -3

Query: 664 LLPRFKTYSGFCFLRESIMVLNFIRTSLLSRAKPSTDDSSNFVLPVAASVSIPMPTL 494
           L  R K    F F+ ES+ + + I   LL +    TD+S N VL +AASVS   P +
Sbjct: 241 LAARNKNMDAFVFMAESLGINSQI---LLQQ----TDESGNTVLHIAASVSFDAPLI 290


>At1g10340.1 68414.m01164 ankyrin repeat family protein contains
           ankyrin repeat domains, Pfam:PF00023
          Length = 578

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 22/57 (38%), Positives = 30/57 (52%)
 Frame = -3

Query: 664 LLPRFKTYSGFCFLRESIMVLNFIRTSLLSRAKPSTDDSSNFVLPVAASVSIPMPTL 494
           L  R K    F F+ ES+ + + I   LL +    TD+S N VL +AASVS   P +
Sbjct: 245 LAARNKNMDAFVFMAESLGINSQI---LLQQ----TDESGNTVLHIAASVSFDAPLI 294


>At1g68270.1 68414.m07798 AMP-dependent synthetase and ligase family
           protein similar to AMP-binding protein GI:1903034 from
           [Brassica napus]; contains Pfam AMP-binding domain
           PF00501
          Length = 535

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
 Frame = -3

Query: 649 KTYSGFCFLRESIMVLNFIRTSLLSRAKPSTDD--SSNFVLPVAASVSIPMPT 497
           +TY   C L  S++ LN  +  ++S   P+T      +F +P+A +V  P+ T
Sbjct: 44  QTYDRCCRLAASLISLNIAKNDVVSVVAPNTPAIYEMHFAVPMAGAVLNPINT 96


>At5g04540.1 68418.m00454 expressed protein
          Length = 833

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 18/57 (31%), Positives = 29/57 (50%)
 Frame = -3

Query: 667 ILLPRFKTYSGFCFLRESIMVLNFIRTSLLSRAKPSTDDSSNFVLPVAASVSIPMPT 497
           +L P ++T+SGF  L E    L+F          P+  +S NF LP+ +S +   P+
Sbjct: 457 LLDPYYRTFSGFQALVEKDW-LSFGHPFSDRVGMPNVSESGNFELPIQSSSARSFPS 512


>At1g65880.1 68414.m07476 AMP-dependent synthetase and ligase family
           protein similar to AMP-binding protein GI:1903034 from
           [Brassica napus]; contains Pfam AMP-binding domain
           PF00501
          Length = 580

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
 Frame = -3

Query: 649 KTYSGFCFLRESIMVLNFIRTSLLSRAKPSTDD--SSNFVLPVAASVSIPMPT 497
           +TY   C L  S++ LN  +  ++S   P+T      +F +P+A +V  P+ T
Sbjct: 44  QTYDRCCRLAASLISLNISKNDVVSVMAPNTPALYEMHFAVPMAGAVLNPINT 96


>At1g57870.1 68414.m06566 shaggy-related protein kinase kappa,
           putative / ASK-kappa, putative similar to shaggy-related
           protein kinase kappa SP:Q39019 GI:717180 from
           [Arabidopsis thaliana]
          Length = 420

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 16/57 (28%), Positives = 29/57 (50%)
 Frame = +3

Query: 492 SKVGIGILTEAATGNTKLELSSVLGFALDRREVRIKFSTIIDSLKKQNPEYVLNLGS 662
           S +G G+ +  +  NTK   SSV   + D  E++I+  T  D  +   P+ +  +G+
Sbjct: 3   SHLGNGVGSSRSAKNTKNTSSSVDWLSRDMLEMKIRDKTEADEERDSEPDIIDGVGA 59


>At4g09980.1 68417.m01634 methyltransferase MT-A70 family protein
           low similarity to SP|P25583 Karyogamy protein KAR4
           {Saccharomyces cerevisiae},
           (N6-adenosine)-methyltransferase [Mus musculus]
           GI:10179948; contains Pfam profile PF05063: MT-A70
           (S-adenosylmethionine-binding subunit of human mRNA:m6A
           methyl-transferase (MTase))
          Length = 775

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 22/96 (22%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
 Frame = +1

Query: 343 TPYNETLVDPDYWDLDEFHPSAANFDKFDWT----LTKRVAAVSGD-NFLISPLGLKLAL 507
           T ++  LVDP + +     P  ++  ++ WT    +  ++ A++   +FL   +G  + L
Sbjct: 636 TKFDVILVDPPWEEYVHRAPGVSDSMEY-WTFEDIINLKIEAIADTPSFLFLWVGDGVGL 694

Query: 508 VYSQRRPQVIRNWNCRRCSALLWTEEKSE*NSVPLL 615
              ++  Q ++ W  RRC  + W +     N+ P L
Sbjct: 695 ---EQGRQCLKKWGFRRCEDICWVKTNKS-NAAPTL 726


>At3g24870.1 68416.m03119 expressed protein
          Length = 1841

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -3

Query: 562  STD-DSSNFVLPVAASVSIPMPTLDPGGRSRSYHPRLQLHA 443
            STD  S  FV P++++ S  +P   PG  S S   ++QLH+
Sbjct: 1585 STDLQSKPFVSPLSSNHSQQLPKSFPGALSPSPQQQMQLHS 1625


>At1g65890.1 68414.m07477 acyl-activating enzyme 12 (AAE12) similar
           to AMP-binding protein GI:1903034 from [Brassica napus];
           contains Pfam AMP-binding domain PF00501; identical to
           cDNA acyl-activating enzyme 12 (At1g65890) mRNA
           GI:29893228, acyl-activating enzyme 12 [Arabidopsis
           thaliana] GI:29893229
          Length = 578

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
 Frame = -3

Query: 649 KTYSGFCFLRESIMVLNFIRTSLLSRAKPSTDD--SSNFVLPVAASVSIPMPT 497
           +TY   C L  S++ LN  +  ++S   P+T      +F +P+A +V  P+ T
Sbjct: 44  QTYDRCCRLAASLISLNIGKNDVVSVVAPNTPAMYEMHFAVPMAGAVLNPINT 96


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,451,499
Number of Sequences: 28952
Number of extensions: 296961
Number of successful extensions: 770
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1447936096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)