Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0826
(738 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix... 23 2.6
AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxida... 22 4.5
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 22 5.9
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 22 5.9
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 22 5.9
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 22 5.9
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 22 5.9
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 22 5.9
AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax pr... 22 5.9
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 22 5.9
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 7.9
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 7.9
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 7.9
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 7.9
>AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix
transcription factor protein.
Length = 249
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +2
Query: 644 RPTSTKLSICVEYPTSLPWRDW 709
RP S + C E PWR W
Sbjct: 228 RPLSLVVRRCEEPTEEKPWRPW 249
>AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxidase
subunit 2 protein.
Length = 683
Score = 22.2 bits (45), Expect = 4.5
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +1
Query: 289 KKNTDAMRSFSFPFIALQDVTVEQPMFSANCIKGKVR 399
+ D ++ F P + +QDVT++ FS ++ K R
Sbjct: 649 RNGVDTLQQFLTPNMRVQDVTIK---FSDRTVRPKQR 682
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 5.9
Identities = 10/38 (26%), Positives = 18/38 (47%)
Frame = -1
Query: 408 RLGTNFTFYTVGREHRLFHSYILQCNKRKTE*SHGICI 295
R T++T Y + FH +R+ E +H +C+
Sbjct: 222 RQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 259
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 5.9
Identities = 10/38 (26%), Positives = 18/38 (47%)
Frame = -1
Query: 408 RLGTNFTFYTVGREHRLFHSYILQCNKRKTE*SHGICI 295
R T++T Y + FH +R+ E +H +C+
Sbjct: 222 RQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 259
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 5.9
Identities = 10/38 (26%), Positives = 18/38 (47%)
Frame = -1
Query: 408 RLGTNFTFYTVGREHRLFHSYILQCNKRKTE*SHGICI 295
R T++T Y + FH +R+ E +H +C+
Sbjct: 222 RQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 259
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.8 bits (44), Expect = 5.9
Identities = 10/38 (26%), Positives = 18/38 (47%)
Frame = -1
Query: 408 RLGTNFTFYTVGREHRLFHSYILQCNKRKTE*SHGICI 295
R T++T Y + FH +R+ E +H +C+
Sbjct: 222 RQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 259
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.8 bits (44), Expect = 5.9
Identities = 10/38 (26%), Positives = 18/38 (47%)
Frame = -1
Query: 408 RLGTNFTFYTVGREHRLFHSYILQCNKRKTE*SHGICI 295
R T++T Y + FH +R+ E +H +C+
Sbjct: 178 RQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 215
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.8 bits (44), Expect = 5.9
Identities = 10/38 (26%), Positives = 18/38 (47%)
Frame = -1
Query: 408 RLGTNFTFYTVGREHRLFHSYILQCNKRKTE*SHGICI 295
R T++T Y + FH +R+ E +H +C+
Sbjct: 222 RQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 259
>AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax
protein.
Length = 100
Score = 21.8 bits (44), Expect = 5.9
Identities = 10/38 (26%), Positives = 18/38 (47%)
Frame = -1
Query: 408 RLGTNFTFYTVGREHRLFHSYILQCNKRKTE*SHGICI 295
R T++T Y + FH +R+ E +H +C+
Sbjct: 10 RQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 47
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.8 bits (44), Expect = 5.9
Identities = 10/38 (26%), Positives = 18/38 (47%)
Frame = -1
Query: 408 RLGTNFTFYTVGREHRLFHSYILQCNKRKTE*SHGICI 295
R T++T Y + FH +R+ E +H +C+
Sbjct: 222 RQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 259
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.9
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -3
Query: 244 LDPLKLWCIIP 212
L P + WCI+P
Sbjct: 1021 LHPQEFWCIVP 1031
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.9
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -3
Query: 244 LDPLKLWCIIP 212
L P + WCI+P
Sbjct: 1021 LHPQEFWCIVP 1031
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.9
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -3
Query: 244 LDPLKLWCIIP 212
L P + WCI+P
Sbjct: 1021 LHPQEFWCIVP 1031
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.9
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -3
Query: 244 LDPLKLWCIIP 212
L P + WCI+P
Sbjct: 1021 LHPQEFWCIVP 1031
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,763
Number of Sequences: 336
Number of extensions: 3815
Number of successful extensions: 21
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -