Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0825
         (776 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_49199| Best HMM Match : Metallophos (HMM E-Value=2.5e-25)          154   9e-38
SB_50882| Best HMM Match : Metallophos (HMM E-Value=8.00001e-41)      124   1e-28
SB_38314| Best HMM Match : Metallophos (HMM E-Value=5.1e-07)           93   3e-19
SB_31501| Best HMM Match : No HMM Matches (HMM E-Value=.)              89   4e-18
SB_36816| Best HMM Match : No HMM Matches (HMM E-Value=.)              64   1e-10
SB_10504| Best HMM Match : MBOAT (HMM E-Value=0.16)                    51   1e-06
SB_56433| Best HMM Match : Metallophos (HMM E-Value=1.7e-15)           50   2e-06
SB_49265| Best HMM Match : efhand (HMM E-Value=0.68)                   44   1e-04
SB_52368| Best HMM Match : No HMM Matches (HMM E-Value=.)              43   3e-04
SB_9847| Best HMM Match : No HMM Matches (HMM E-Value=.)               41   0.001
SB_1044| Best HMM Match : Metallophos (HMM E-Value=5.8e-16)            39   0.005
SB_35915| Best HMM Match : DUF593 (HMM E-Value=0.12)                   28   7.3  
SB_28258| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.3  
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.7  

>SB_49199| Best HMM Match : Metallophos (HMM E-Value=2.5e-25)
          Length = 173

 Score =  154 bits (373), Expect = 9e-38
 Identities = 66/84 (78%), Positives = 75/84 (89%)
 Frame = +3

Query: 255 TVCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRIT 434
           TVCGDIHGQFYDL+ELF+ GG VP T+Y+FMGDFVDRG+YS+ETF  LL LK ++PDRIT
Sbjct: 47  TVCGDIHGQFYDLEELFRTGGQVPNTSYVFMGDFVDRGYYSLETFTRLLTLKAKWPDRIT 106

Query: 435 LIRGNHESRQITQVYGFYDECLRK 506
           L+RGNHESRQITQVYGFYDEC  K
Sbjct: 107 LLRGNHESRQITQVYGFYDECQSK 130



 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 25/42 (59%), Positives = 34/42 (80%)
 Frame = +2

Query: 509 GSITVWRYCTEIFDYLSLSAIIDGRIFCVHGGLSPSIHTLDQ 634
           G+   WRYC ++FD L+++AIIDG++ CVHGGLSP I T+DQ
Sbjct: 132 GNANAWRYCCKVFDLLTVAAIIDGQVLCVHGGLSPDIKTIDQ 173



 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 24/45 (53%), Positives = 31/45 (68%)
 Frame = +1

Query: 121 SDLDRQIEQLKRCEIIMEAEVKALCAKAREILVEESNVQRVDSPV 255
           +DLDR I+  K CE + E ++K LC    E+L+EESNVQ V SPV
Sbjct: 2   ADLDRWIDIAKECEYLPENDLKKLCDYVCELLLEESNVQPVSSPV 46


>SB_50882| Best HMM Match : Metallophos (HMM E-Value=8.00001e-41)
          Length = 293

 Score =  124 bits (298), Expect = 1e-28
 Identities = 51/83 (61%), Positives = 65/83 (78%)
 Frame = +3

Query: 258 VCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITL 437
           +CGDIHGQ+YDL  LF+ GG  PE+NYLF+GD+VDRG  S+ET  LLLA K++YP+   L
Sbjct: 61  ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 120

Query: 438 IRGNHESRQITQVYGFYDECLRK 506
           +RGNHE   I ++YGFYDEC R+
Sbjct: 121 LRGNHECASINRIYGFYDECKRR 143



 Score = 35.5 bits (78), Expect = 0.048
 Identities = 13/30 (43%), Positives = 22/30 (73%)
 Frame = +2

Query: 512 SITVWRYCTEIFDYLSLSAIIDGRIFCVHG 601
           +I +W+  T+ F+ L ++AI+D +IFC HG
Sbjct: 145 NIKLWKTFTDCFNCLPVAAILDEKIFCCHG 174



 Score = 29.9 bits (64), Expect = 2.4
 Identities = 10/31 (32%), Positives = 22/31 (70%)
 Frame = +1

Query: 166 IMEAEVKALCAKAREILVEESNVQRVDSPVR 258
           + EAE++ LC K+REI + +  +  +++P++
Sbjct: 30  LTEAEIRGLCLKSREIFLSQPILLELEAPLK 60


>SB_38314| Best HMM Match : Metallophos (HMM E-Value=5.1e-07)
          Length = 199

 Score = 92.7 bits (220), Expect = 3e-19
 Identities = 38/52 (73%), Positives = 46/52 (88%)
 Frame = +3

Query: 255 TVCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALK 410
           TVCGD+HGQF+DL ELF++GG  P+TNYLFMGD+VDRG+YSVET  LL+ LK
Sbjct: 54  TVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVTLK 105



 Score = 64.5 bits (150), Expect = 9e-11
 Identities = 24/29 (82%), Positives = 26/29 (89%)
 Frame = +2

Query: 674 GPMCDLLWSDPEDTQGWGVSPRGAGYLFG 760
           GPMCDLLWSDP+D  GWG+SPRGAGY FG
Sbjct: 106 GPMCDLLWSDPDDRGGWGISPRGAGYTFG 134



 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 26/44 (59%), Positives = 32/44 (72%)
 Frame = +1

Query: 124 DLDRQIEQLKRCEIIMEAEVKALCAKAREILVEESNVQRVDSPV 255
           DL+  IEQL  C+ + EA+VK LC KA+EIL +ESNVQ V  PV
Sbjct: 10  DLEVWIEQLMECKQLTEAQVKTLCEKAKEILSKESNVQEVKCPV 53


>SB_31501| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1150

 Score = 89.0 bits (211), Expect = 4e-18
 Identities = 41/80 (51%), Positives = 54/80 (67%)
 Frame = +3

Query: 255 TVCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRIT 434
           TVCGDIHGQFYDL +LF+VGG    T YLF+GD+VDRG++S+E           Y + + 
Sbjct: 84  TVCGDIHGQFYDLVKLFEVGGSPATTRYLFLGDYVDRGYFSIECL---------YTNTLF 134

Query: 435 LIRGNHESRQITQVYGFYDE 494
           L+RGNHE R +T+ + F  E
Sbjct: 135 LLRGNHECRHLTEYFTFKTE 154



 Score = 87.0 bits (206), Expect = 1e-17
 Identities = 38/70 (54%), Positives = 49/70 (70%)
 Frame = +2

Query: 512 SITVWRYCTEIFDYLSLSAIIDGRIFCVHGGLSPSIHTLDQIRTIDRKQEVPHDGPMCDL 691
           S  V+  C E FD L L+A+++ +  CVHGGLSP IHTLD ++ +DR +E P  GPMCDL
Sbjct: 192 SEAVYDACMESFDCLPLAALMNQQFLCVHGGLSPEIHTLDDVKKLDRFKEPPAFGPMCDL 251

Query: 692 LWSDPEDTQG 721
           LWSDP +  G
Sbjct: 252 LWSDPLEDYG 261


>SB_36816| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 204

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
 Frame = +2

Query: 536 TEIFDYLSLSAIIDGRIFCVHGGLSPSIHTLDQIRTIDRKQEVPHDGPMCDLLWSDPE-D 712
           T IFDY   SA    +         P++ +++QIR I R  +VP  G +CDLLWSDP+ D
Sbjct: 30  TAIFDYAPYSACAQRKTLA---NFPPNM-SMEQIRRIMRPTDVPDTGLLCDLLWSDPDKD 85

Query: 713 TQGWGVSPRGAGYLFGS 763
           T GWG + RG  + FG+
Sbjct: 86  TNGWGENDRGVSFTFGA 102


>SB_10504| Best HMM Match : MBOAT (HMM E-Value=0.16)
          Length = 465

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
 Frame = +2

Query: 644 IDRKQEVPHDGPMCDLLWSDP-EDTQGWGVSPRGAGYLFG 760
           ++R  +VP  G +CDLLWSDP ED  GWG + RG  + FG
Sbjct: 114 LERPMDVPDKGLVCDLLWSDPDEDITGWGDNDRGVSWTFG 153


>SB_56433| Best HMM Match : Metallophos (HMM E-Value=1.7e-15)
          Length = 417

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 21/44 (47%), Positives = 29/44 (65%)
 Frame = +3

Query: 324 PETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHE 455
           PE  Y+F GD VDRG  S+E  ++L A  + YP+ + + RGNHE
Sbjct: 6   PENPYIFNGDLVDRGPRSIEICIILFAFTILYPNGVYINRGNHE 49



 Score = 48.0 bits (109), Expect = 8e-06
 Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
 Frame = +2

Query: 551 YLSLSAIIDGRIFCVHGGLSPSIHTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDTQGWGV 730
           +L L+ I++ +IF  HGG+S +I  LD I  IDR +       + DLLWSDP+ T G   
Sbjct: 85  WLPLATIVNNKIFVAHGGIS-NITDLDIIERIDRHK-------VLDLLWSDPKPTPGCKP 136

Query: 731 SP-RGAGYLFG 760
           +  RG G  FG
Sbjct: 137 NTFRGGGCYFG 147


>SB_49265| Best HMM Match : efhand (HMM E-Value=0.68)
          Length = 720

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 22/46 (47%), Positives = 31/46 (67%), Gaps = 4/46 (8%)
 Frame = +3

Query: 258 VCGDIHGQFYDL----KELFKVGGDVPETNYLFMGDFVDRGFYSVE 383
           V GD+HG F DL    K L+++G  +  +N+LF+GD+VDRG   VE
Sbjct: 675 VLGDLHGNFRDLVCFEKLLWRMGPVLTPSNFLFLGDYVDRGENGVE 720


>SB_52368| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 128

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 18/36 (50%), Positives = 24/36 (66%)
 Frame = +3

Query: 258 VCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVDR 365
           + GDIHGQ+ DL   F   G  P  +Y+F+GD+VDR
Sbjct: 63  IFGDIHGQYEDLLRHFDKLGYPPNESYIFLGDYVDR 98


>SB_9847| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 130

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = +2

Query: 716 QGWGVSPRGAGYLFGS 763
           QGWGVSPRGAGYLFGS
Sbjct: 3   QGWGVSPRGAGYLFGS 18


>SB_1044| Best HMM Match : Metallophos (HMM E-Value=5.8e-16)
          Length = 250

 Score = 38.7 bits (86), Expect = 0.005
 Identities = 23/67 (34%), Positives = 36/67 (53%)
 Frame = +3

Query: 258 VCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITL 437
           V GDIHG    L++LF+          +F+GD+VD    S  T   L+ +  ++ D I  
Sbjct: 7   VFGDIHGGLRALQQLFERAEITINDKLIFLGDYVDGWSESAATIQFLIEIAEKH-DCI-F 64

Query: 438 IRGNHES 458
           I+GNH++
Sbjct: 65  IKGNHDA 71


>SB_35915| Best HMM Match : DUF593 (HMM E-Value=0.12)
          Length = 371

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +1

Query: 118 TSDLDRQIEQLKRCEIIMEAEVKALCAKAREIL 216
           T DL+ +IE L+R   + EAEV  L ++  E+L
Sbjct: 149 TKDLETEIEALRRDTCLKEAEVADLQSEKDEVL 181


>SB_28258| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1234

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -2

Query: 757  KEIASSSW*NTPTLCIFRITPQQVTHWSVVRNFLLSINST 638
            KE+ SS+W  T     F ITP    +  +V+N  L  + T
Sbjct: 1016 KEVLSSNWTETKGKVYFTITPAVPVNSLIVQNVTLGFSDT 1055


>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2193

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +1

Query: 115  DTSDLDRQIEQLKRCEIIMEAEVK 186
            D+SDL+ QIE+LKR  + +E + K
Sbjct: 1839 DSSDLESQIERLKRSNVRLEDQNK 1862


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,282,791
Number of Sequences: 59808
Number of extensions: 521664
Number of successful extensions: 1061
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1055
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2119930593
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)