Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0823
(702 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 137 7e-33
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 137 7e-33
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 132 3e-31
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 116 1e-26
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 75 7e-14
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 9e-13
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 56 3e-08
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 6e-04
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.90
SB_24762| Best HMM Match : Astacin (HMM E-Value=0) 31 0.90
SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08) 30 1.6
SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 2.8
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 4.8
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_42630| Best HMM Match : Ets (HMM E-Value=0) 28 8.4
SB_24803| Best HMM Match : LRR_1 (HMM E-Value=0.0066) 28 8.4
SB_45916| Best HMM Match : Cadherin (HMM E-Value=0) 28 8.4
SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_7343| Best HMM Match : EGF (HMM E-Value=0) 28 8.4
SB_151| Best HMM Match : zf-CCHC (HMM E-Value=8.9e-05) 28 8.4
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 137 bits (332), Expect = 7e-33
Identities = 61/86 (70%), Positives = 72/86 (83%)
Frame = +3
Query: 252 PNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVTDGGKPKIKVAYKGEDKTFFPEEVSSM 431
P NT+FDAKRLIGRKF+D V DM HWPF V+ +G +PKI+V +KGE K+FFPEE+SSM
Sbjct: 63 PENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSM 122
Query: 432 VLTKMKETAEAYLGKTVQNAVITVPA 509
VLTKMKETAEAYLG V +AV+TVPA
Sbjct: 123 VLTKMKETAEAYLGAKVTDAVVTVPA 148
Score = 132 bits (318), Expect = 3e-31
Identities = 61/63 (96%), Positives = 62/63 (98%)
Frame = +1
Query: 67 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 246
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 247 MNP 255
MNP
Sbjct: 61 MNP 63
Score = 111 bits (268), Expect = 4e-25
Identities = 54/60 (90%), Positives = 57/60 (95%)
Frame = +2
Query: 509 YFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVS 688
YF+DSQRQATKDAGTI+GLNVLRIINEPTAAAIAYGLDKK ERNVLI+DLGGGTFDVS
Sbjct: 149 YFHDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIYDLGGGTFDVS 208
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 137 bits (332), Expect = 7e-33
Identities = 63/86 (73%), Positives = 75/86 (87%)
Frame = +3
Query: 252 PNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVTDGGKPKIKVAYKGEDKTFFPEEVSSM 431
P NTIFDAKRLIGR+++DATVQ+DMK WPF++++D KPKI+V YKGE KTF EE+SSM
Sbjct: 63 PENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSM 122
Query: 432 VLTKMKETAEAYLGKTVQNAVITVPA 509
VL KMKETAEAYLG+ V +AVITVPA
Sbjct: 123 VLGKMKETAEAYLGQKVTSAVITVPA 148
Score = 127 bits (306), Expect = 1e-29
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = +1
Query: 67 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 246
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 247 MNP 255
+NP
Sbjct: 61 LNP 63
Score = 115 bits (276), Expect = 4e-26
Identities = 53/60 (88%), Positives = 58/60 (96%)
Frame = +2
Query: 509 YFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVS 688
YFNDSQRQATKDAGTI+GLNVLR+INEPTAAA+AYGLDK +GE+NVLIFDLGGGTFDVS
Sbjct: 149 YFNDSQRQATKDAGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVLIFDLGGGTFDVS 208
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 132 bits (319), Expect = 3e-31
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = +1
Query: 67 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 246
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 247 MNPT 258
MNPT
Sbjct: 61 MNPT 64
Score = 114 bits (275), Expect = 6e-26
Identities = 56/60 (93%), Positives = 56/60 (93%)
Frame = +2
Query: 509 YFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVS 688
YFNDSQRQATKDAG ISGLNVLRIINEPTAAAIAYGLDKK ERNVLIFDLGGGTFDVS
Sbjct: 242 YFNDSQRQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKVGQERNVLIFDLGGGTFDVS 301
Score = 114 bits (274), Expect = 7e-26
Identities = 64/111 (57%), Positives = 72/111 (64%), Gaps = 25/111 (22%)
Frame = +3
Query: 252 PNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVTDGGKPKIKVAYKGEDKTFFPEEV--- 422
P NTIFDAKRLIGR+F+D V+ DMKHW FEVV + G+PK+KV YKGE KTFF EEV
Sbjct: 63 PTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVNE 122
Query: 423 ----------------------SSMVLTKMKETAEAYLGKTVQNAVITVPA 509
SSMVL KMKETAEAYLG V +AV+TVPA
Sbjct: 123 AGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPA 173
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = +3
Query: 417 EVSSMVLTKMKETAEAYLGKTVQNAVITVPA 509
++SSMVL KMKETAEAYLG V +AV+TVPA
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPA 241
Score = 33.9 bits (74), Expect = 0.13
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +2
Query: 509 YFNDSQRQATKDAG 550
YFNDSQRQATKDAG
Sbjct: 174 YFNDSQRQATKDAG 187
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 116 bits (280), Expect = 1e-26
Identities = 55/86 (63%), Positives = 68/86 (79%)
Frame = +3
Query: 252 PNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVTDGGKPKIKVAYKGEDKTFFPEEVSSM 431
P NT+FDAKRLIGR ++D +VQ D+K +PF+VV KP ++V K E KTF EE+S+M
Sbjct: 761 PENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAM 820
Query: 432 VLTKMKETAEAYLGKTVQNAVITVPA 509
VLTKMKETAEAYLGK V +AV+TVPA
Sbjct: 821 VLTKMKETAEAYLGKKVTHAVVTVPA 846
Score = 106 bits (255), Expect = 2e-23
Identities = 49/60 (81%), Positives = 56/60 (93%)
Frame = +2
Query: 509 YFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVS 688
YFND+QRQATKDAG I+GL V+RIINEPTAAAIAYG+DKK GE+N+L+FDLGGGTFDVS
Sbjct: 847 YFNDAQRQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKK-EGEKNILVFDLGGGTFDVS 905
Score = 99 bits (238), Expect = 2e-21
Identities = 46/58 (79%), Positives = 52/58 (89%), Gaps = 1/58 (1%)
Frame = +1
Query: 85 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNP 255
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNP 761
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 74.5 bits (175), Expect = 7e-14
Identities = 36/59 (61%), Positives = 45/59 (76%)
Frame = +2
Query: 512 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVS 688
F+ QR AT A +++G+ VLR+INEPTAAA+AYGL KK G NV++ DLGGGT DVS
Sbjct: 180 FDIKQRNATVKAASLAGITVLRVINEPTAAALAYGLHKK-EGVANVMVVDLGGGTLDVS 237
Score = 65.3 bits (152), Expect = 5e-11
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Frame = +1
Query: 73 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 246
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 247 MNP 255
+NP
Sbjct: 90 INP 92
Score = 62.9 bits (146), Expect = 2e-10
Identities = 39/105 (37%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Frame = +3
Query: 252 PNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVTDG-GKPKIKVAYKGEDKTFFPEEVSS 428
P NTI+DAKR IG+ F + K + F V TD G V KG PEE+
Sbjct: 92 PKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGG 151
Query: 429 MVLTKMKETAEAYLGKTVQNAVITVPATSMTLKDKPQKMQVPSLA 563
V+ K++ AE L TV AV++VPA +K + ++ SLA
Sbjct: 152 YVIKKLRTMAERNLTTTVTKAVMSVPA-EFDIKQRNATVKAASLA 195
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 70.9 bits (166), Expect = 9e-13
Identities = 37/85 (43%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = +3
Query: 258 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVT-DGGKPKIKVAYKGEDKTFFPEEVSSMV 434
NTI KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V +M+
Sbjct: 121 NTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVMAML 180
Query: 435 LTKMKETAEAYLGKTVQNAVITVPA 509
T++K TAE L V + VI+VP+
Sbjct: 181 FTRLKTTAEIALKTKVTDCVISVPS 205
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Frame = +2
Query: 485 ECSYHGSRYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKG---TGERNVLI 655
+C Y+ D QR+ DA +GLN LR++N+ TA ++AYG+ K+ RNV+
Sbjct: 198 DCVISVPSYYTDRQRRCMLDASATAGLNCLRLMNDTTAVSLAYGIYKQDLPTDKPRNVVF 257
Query: 656 FDLGGGTFDV 685
D+G + V
Sbjct: 258 VDIGHSSLQV 267
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +1
Query: 85 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 240
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 56.0 bits (129), Expect = 3e-08
Identities = 39/72 (54%), Positives = 43/72 (59%), Gaps = 26/72 (36%)
Frame = +2
Query: 509 YFNDSQRQATKDAGTISGLNVL------------------------RIINEPTAAAIAYG 616
+FND+QRQATKDAGTI+GL+VL RIINEPTAAAIAYG
Sbjct: 48 HFNDAQRQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYG 107
Query: 617 LDKK--GTGERN 646
LDK G ERN
Sbjct: 108 LDKARGGKAERN 119
Score = 52.0 bits (119), Expect = 5e-07
Identities = 24/46 (52%), Positives = 35/46 (76%)
Frame = +3
Query: 372 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPA 509
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVPA
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPA 47
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Frame = +2
Query: 509 YFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK----GTGERNVLIFDLGGGT 676
+FN ++R+A A + GLNVL+I+N TA A+ YGL ++ T E++ + +D+G +
Sbjct: 115 FFNQAERRALLRAAELVGLNVLQIMNSNTAVALNYGLFQQKSFNDTLEKHFMFYDMGASS 174
Score = 34.3 bits (75), Expect = 0.097
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 366 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 506
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVP 113
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +1
Query: 136 GKVEIIANDQGNRTTPSYVAFTDTERLI 219
G IIAND G+R TP+ VAF+DTE+LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 0.90
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +1
Query: 145 EIIANDQGNRTTPSYVAFT-DTERL 216
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_24762| Best HMM Match : Astacin (HMM E-Value=0)
Length = 733
Score = 31.1 bits (67), Expect = 0.90
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 548 LHLLWLVFESH*SSGNRDNCILHSFAKIS 462
++ LWL F + SS + D C+LHS A ++
Sbjct: 415 IYTLWLDFSRYYSSASSDICVLHSIAHLA 443
>SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08)
Length = 1011
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +3
Query: 363 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPATSMTLKDKPQK 542
+PK K + E+ EE +M ++K LGK V+ + T ++TL + Q
Sbjct: 654 QPKFKKTKEEEEFDKLLEEADAMTQQEVKNVKNIKLGKNVKTQLYTCEPCNITLNSQKQM 713
Query: 543 MQ 548
Q
Sbjct: 714 SQ 715
>SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 29.9 bits (64), Expect = 2.1
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +3
Query: 54 LKIQNGKSTRSRN-RSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCR 230
L++ N + ++ + R GY L R C R + +R + H++L R +RC
Sbjct: 225 LRLVNTRDDKTHDKRPGYRKLSRVC-GGRRPNEPYERTARV-HTILSTETETRFCAKRCA 282
Query: 231 QEPGGDEPNNTIFDA 275
G +P NT F+A
Sbjct: 283 GTASGMDPKNTPFNA 297
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -3
Query: 253 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 155
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 13 HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 99
HVC +V T K K ++K PA GI+L
Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = -3
Query: 460 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSVTTSKGQCFMSACTVASSNLRPMR 281
S F+F ST + +S +KV+ SPL + + P+ G S C V NL
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNV--QNLSRCP 1165
Query: 280 RLASNIVL 257
++++ VL
Sbjct: 1166 KISNATVL 1173
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 28.3 bits (60), Expect = 6.4
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +2
Query: 647 VLIFDLGGGTFDVS 688
+ ++DLGGGTFD+S
Sbjct: 2 IAVYDLGGGTFDIS 15
>SB_42630| Best HMM Match : Ets (HMM E-Value=0)
Length = 631
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +2
Query: 95 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 238
IW P+ L++S R+S + PLR L P VSS +P T
Sbjct: 42 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 89
>SB_24803| Best HMM Match : LRR_1 (HMM E-Value=0.0066)
Length = 727
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -2
Query: 518 H*SSGNRDNCILHSFAKISFGSFLHFRKHHGTDFLGEKGFVFTLI 384
H GN+ +CIL F+K +F H R DF G +G T +
Sbjct: 19 HLDHGNQTDCILLDFSK-AFDRVAHGRLLQKLDFYGIRGKPLTWV 62
>SB_45916| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 1774
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -3
Query: 655 DKYISFSSTLFVKTVSNRSSSRFIDDSEN 569
+K ISF +LF+ VSN S+ R+I +E+
Sbjct: 752 NKVISFGPSLFMDKVSNASAGRYICIAES 780
>SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 977
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +2
Query: 95 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 238
IW P+ L++S R+S + PLR L P VSS +P T
Sbjct: 388 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 435
>SB_7343| Best HMM Match : EGF (HMM E-Value=0)
Length = 1233
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/72 (23%), Positives = 29/72 (40%)
Frame = +1
Query: 106 TYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTTQYSMPNVS 285
T++ + H I+ N G +TP + T A + + M PT V+
Sbjct: 559 THTTTSITLHPSSAILDNSLGPASTPRTTISSTTHVSSTPIASSSMVMTPTAINPSATVT 618
Query: 286 SDVSSKMLLCKP 321
+ V S ++ KP
Sbjct: 619 TTVPSTSVVVKP 630
>SB_151| Best HMM Match : zf-CCHC (HMM E-Value=8.9e-05)
Length = 1382
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = -3
Query: 667 AEVKDKYISFSSTLFVKTVSNRSSSRFIDDSENVQARDGTCIFCGLSLRVIEVAGTVITA 488
A K+ Y+ + + + +NR S R ++ + +A+D L R+ E +V+
Sbjct: 298 ARTKEVYVLSTFRVIARISANRDSRRLLNRKKRERAKDCFREIAKLCSRMNETVASVLAH 357
Query: 487 FCT 479
CT
Sbjct: 358 SCT 360
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,946,240
Number of Sequences: 59808
Number of extensions: 552123
Number of successful extensions: 1718
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1709
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1841633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -