Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0821
         (728 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    32   0.005
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    27   0.16 
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    27   0.16 
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   3.3  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    22   4.4  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   5.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   5.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   5.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   5.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.7  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   7.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 31.9 bits (69), Expect = 0.005
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
 Frame = +2

Query: 380 HFY-CMHINYYMLVVFSALKFIKLLNSMINKMHDMYLICIMYLIV---FLRCFVVFNCCL 547
           HF  C +  YY  ++   + +      +I  +H ++L+CI Y +V   FL C   F C  
Sbjct: 95  HFLLCTYYFYYAFIILLCVYYFYYA-FIIFTVHLLFLLCIYYFVVPLFFLLCIYYFYCAF 153

Query: 548 V 550
           +
Sbjct: 154 I 154



 Score = 29.5 bits (63), Expect = 0.029
 Identities = 18/76 (23%), Positives = 31/76 (40%)
 Frame = +2

Query: 383 FYCMHINYYMLVVFSALKFIKLLNSMINKMHDMYLICIMYLIVFLRCFVVFNCCLVSTNY 562
           ++ +H+ +   + +    FI     ++     + L+CI Y       F V    LV   Y
Sbjct: 201 YFTLHLLFLPCIYYFYSAFIIFTIHLLFYCVLIILLCIYYFYYAFILFTVHLLLLVCI-Y 259

Query: 563 YFEYIKPYVCCIIVQF 610
           YF Y+    CC  + F
Sbjct: 260 YFYYMHLLFCCAFIIF 275



 Score = 27.5 bits (58), Expect = 0.12
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = +2

Query: 455 SMINKMHDMYLICIMYLIVFLR--C-FVVFNCCLVSTNYYFEYIKPYVCCI 598
           S+   +H ++L+C  Y  V L   C F++F    +   YYF Y    + C+
Sbjct: 63  SITFNVHLLFLLCSGYFTVHLLFYCPFIIFTVHFLLCTYYFYYAFIILLCV 113



 Score = 27.5 bits (58), Expect = 0.12
 Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 11/76 (14%)
 Frame = +2

Query: 380 HFYC------MHINYYMLVVFSALKFIKLLNSMINKMHDMYLICIMYL---IVFLRCFVV 532
           HF+C      MH+ +    +F  +  + LL      +H ++L CI Y     +     ++
Sbjct: 168 HFFCAFIIFTMHLLFCCAFIFFNMHLLFLLCLDYFTLHLLFLPCIYYFYSAFIIFTIHLL 227

Query: 533 FNCCLV--STNYYFEY 574
           F C L+     YYF Y
Sbjct: 228 FYCVLIILLCIYYFYY 243


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 16/62 (25%), Positives = 31/62 (50%)
 Frame = +2

Query: 362 LTATSGHFYCMHINYYMLVVFSALKFIKLLNSMINKMHDMYLICIMYLIVFLRCFVVFNC 541
           L   S  F+   I Y +  VF A  +I  +  +  + + ++L C++Y++  L  F+ +N 
Sbjct: 132 LRNVSVQFFVYVILYILATVFLAYVWICEMGVVTLQAYTLHLFCVLYVV--LLHFLTYNL 189

Query: 542 CL 547
            L
Sbjct: 190 SL 191


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 16/62 (25%), Positives = 31/62 (50%)
 Frame = +2

Query: 362 LTATSGHFYCMHINYYMLVVFSALKFIKLLNSMINKMHDMYLICIMYLIVFLRCFVVFNC 541
           L   S  F+   I Y +  VF A  +I  +  +  + + ++L C++Y++  L  F+ +N 
Sbjct: 132 LRNVSVQFFVYVILYILATVFLAYVWICEMGVVTLQAYTLHLFCVLYVV--LLHFLTYNL 189

Query: 542 CL 547
            L
Sbjct: 190 SL 191


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -2

Query: 298 SCFIITITGIFVHLYTLWQSR 236
           +CF++ +  I+   Y+ WQS+
Sbjct: 7   ACFLLLLYYIYSKHYSYWQSK 27


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 284 NYNRNICTFIHF 249
           N N N+CT +H+
Sbjct: 47  NINANLCTHVHY 58


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +1

Query: 493  YNVFDCIFTMFCCFQLLFSID*LLFRIYQT 582
            YN+   +F M  CF    +I  ++ +I  T
Sbjct: 949  YNIIPILFFMLVCFTCKSNIQLIVAQILST 978


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +1

Query: 493  YNVFDCIFTMFCCFQLLFSID*LLFRIYQT 582
            YN+   +F M  CF    +I  ++ +I  T
Sbjct: 949  YNIIPILFFMLVCFTCKSNIQLIVAQILST 978


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +1

Query: 493  YNVFDCIFTMFCCFQLLFSID*LLFRIYQT 582
            YN+   +F M  CF    +I  ++ +I  T
Sbjct: 949  YNIIPILFFMLVCFTCKSNIQLIVAQILST 978


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +1

Query: 493  YNVFDCIFTMFCCFQLLFSID*LLFRIYQT 582
            YN+   +F M  CF    +I  ++ +I  T
Sbjct: 949  YNIIPILFFMLVCFTCKSNIQLIVAQILST 978


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +2

Query: 389  CMHINYYMLVVFSALKFIKLLNSMINKMHDMYLICIMY 502
            C HINY   V+ S+   +K  +S  +  ++ Y   + Y
Sbjct: 2350 CTHINYGFAVLDSSSMTLKPHDSWADIDNEFYKKVVSY 2387


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = -3

Query: 147 NHYDSSPQESTFVIRSW 97
           NH +  P++  F  +SW
Sbjct: 44  NHLNEEPEKLHFTFKSW 60


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,683
Number of Sequences: 336
Number of extensions: 3577
Number of successful extensions: 18
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)