Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0818
         (681 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.8  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   5.3  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   5.3  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/15 (73%), Positives = 11/15 (73%)
 Frame = +1

Query: 454  YLPS*IDWSLCTQ*N 498
            YLPS ID SLCT  N
Sbjct: 2340 YLPSDIDPSLCTHIN 2354



 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +1

Query: 454  YLPS*IDWSLCT 489
            YLPS ID  LCT
Sbjct: 1842 YLPSDIDPDLCT 1853


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/14 (57%), Positives = 12/14 (85%), Gaps = 1/14 (7%)
 Frame = +1

Query: 496 NLF-VCICFFFLIV 534
           NLF +C CF++L+V
Sbjct: 320 NLFYLCFCFYWLLV 333


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/14 (57%), Positives = 12/14 (85%), Gaps = 1/14 (7%)
 Frame = +1

Query: 496 NLF-VCICFFFLIV 534
           NLF +C CF++L+V
Sbjct: 276 NLFYLCFCFYWLLV 289


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,478
Number of Sequences: 336
Number of extensions: 2686
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)