Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0817
         (720 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   2.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   2.5  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   3.3  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   3.3  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   4.4  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   4.4  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = -1

Query: 486 GEPLHPVRV 460
           GEP+HPVRV
Sbjct: 374 GEPVHPVRV 382


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = -1

Query: 486 GEPLHPVRV 460
           GEP+HPVRV
Sbjct: 374 GEPVHPVRV 382


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3

Query: 480 AHQVLRR*TALMRLFLKKLGYEKYAALL 563
           A+ +LRR  AL+   L+KL   KY  L+
Sbjct: 475 ANIILRRRFALINSILRKLYKNKYRKLI 502


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 442 PNAAGDLNGCVAGTCTYA 389
           P   GD+N C++  C+ A
Sbjct: 293 PRCEGDINECLSNPCSNA 310


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +1

Query: 445 PYSFSNPDRVKRLTK 489
           PYSF  PD  K L K
Sbjct: 29  PYSFEKPDSQKSLWK 43


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +1

Query: 445 PYSFSNPDRVKRLTK 489
           PYSF  PD  K L K
Sbjct: 29  PYSFEKPDSQKSLWK 43


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,630
Number of Sequences: 336
Number of extensions: 2881
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)