Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0817
(720 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_640| Best HMM Match : No HMM Matches (HMM E-Value=.) 88 6e-18
SB_10901| Best HMM Match : SAM_1 (HMM E-Value=2.5e-09) 40 0.002
SB_39156| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.019
SB_33399| Best HMM Match : Ank (HMM E-Value=0) 32 0.54
SB_37872| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.94
SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_7539| Best HMM Match : Sulfatase (HMM E-Value=3.5e-05) 29 3.8
SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_59202| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_45651| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_24133| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_35001| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_24053| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_21208| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_26060| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_53355| Best HMM Match : CHCH (HMM E-Value=3.3e-07) 28 8.8
SB_45039| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
>SB_640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 917
Score = 88.2 bits (209), Expect = 6e-18
Identities = 45/85 (52%), Positives = 60/85 (70%)
Frame = +1
Query: 253 NKRFQRLESHVVTLARSVAHLSSEMRTQHLVMQEMDTIRAEIAALRHMYKSQQHIRSGHQ 432
NKRF RLESHVVTLARSVAHLSSE+R+Q + +++D +R E+ LR + + H R G
Sbjct: 775 NKRFTRLESHVVTLARSVAHLSSELRSQAAISEDLDEMRKELQQLRAWQEEEVHTRLGGV 834
Query: 433 RHSDPYSFSNPDRVKRLTKFFGDEP 507
+ S Y+ SN RV +L +FFG+EP
Sbjct: 835 QQSLQYA-SNLKRVIKLRRFFGEEP 858
Score = 72.1 bits (169), Expect = 4e-13
Identities = 30/53 (56%), Positives = 43/53 (81%)
Frame = +3
Query: 510 LMRLFLKKLGYEKYAALLEKEKVGAAELPYVGEDRLRALGVPLGPRMRILKEA 668
L+ +FLKKLGYE++A E++G ELPY+ E+RL+ LG+PLGPR+RI++EA
Sbjct: 860 LLVMFLKKLGYERFAPNFAAEQIGVLELPYLSEERLQGLGIPLGPRLRIVEEA 912
>SB_10901| Best HMM Match : SAM_1 (HMM E-Value=2.5e-09)
Length = 1472
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +3
Query: 519 LFLKKLGYEKYAALLEKEKVGAAELPYVGEDRLRALGVPLGPRMRIL 659
+ LK+L EKY + E+ + L + E L LG+P GPR+++L
Sbjct: 1228 MILKRLTLEKYLPVFEENNINGGRLAQMTEADLERLGIPKGPRLKLL 1274
>SB_39156| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +3
Query: 522 FLKKLGYEKYAALLEKEKVGAAELPYVGEDRLRALGVPLGPRMRILK 662
FL L E++ A + KE + + L + L+++G+PLGPR +I++
Sbjct: 414 FLASLNLEQFTASILKESIDLSALLLCDDKDLQSVGLPLGPRRKIME 460
>SB_33399| Best HMM Match : Ank (HMM E-Value=0)
Length = 1416
Score = 31.9 bits (69), Expect = 0.54
Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +3
Query: 513 MRLFLKKLGYEKYAALLEKEKVGAAELPYVGEDRLRALGVPLGPRMRILKEA-GIHQELH 689
++ FL++L + +L +K ++ L + E +G+P GPR+++L ++ E++
Sbjct: 1322 LQSFLERLSLGSHLSLFQKNEIDLDALMLMSEKDYADIGLPKGPRVKLLNSTRRLYPEVN 1381
Query: 690 HLS 698
S
Sbjct: 1382 EFS 1384
>SB_37872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 357
Score = 31.1 bits (67), Expect = 0.94
Identities = 14/50 (28%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +1
Query: 265 QRLESHVVTLA-RSVAHLSSEMRTQHLVMQEMDTIRAEIAALRHMYKSQQ 411
++L+S + L R+VA ++ + ++ E+D++RAE+A + +S+Q
Sbjct: 133 EKLKSEIAFLKDRAVAEQMNKESMEEMLQAELDSVRAELATMSERLESEQ 182
>SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4865
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Frame = +3
Query: 264 PAAGVARGDAGALRRAPVQ------RNENPAPRHAGDGHHPRRDRGPQAYVQVPAT 413
PAAG RGD R PVQ ++ PA + PR+D G Q ++ A+
Sbjct: 3174 PAAGKQRGDEAKGRSTPVQTPRRGSQDNRPAENSQYTENTPRKDEGQQKKEEIKAS 3229
>SB_7539| Best HMM Match : Sulfatase (HMM E-Value=3.5e-05)
Length = 492
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = -2
Query: 350 CMTRCWVLISLDRCATERASVTTCDSSRWNRLLYPCSPVSSCAHWSSVSCP 198
C T WV ++CAT R V C + RW C V CA W + + P
Sbjct: 156 CATCRWV----EQCATCRW-VEQCATCRWVEQCATCRWVEQCATWDNGAQP 201
>SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4527
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -3
Query: 466 PGY*MNTDPNAAGDLNGCVAGTCTYA 389
PGY +++DP+ D++ C +G+ T A
Sbjct: 496 PGYHLDSDPHICSDIDECTSGSHTCA 521
>SB_59202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1530
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -2
Query: 293 SVTTCDSSRWNRLLYPCSPVSSCAHWSSVSC 201
+ + C S WN+L PCS SS ++ C
Sbjct: 1016 AASNCHRSNWNQLDQPCSTYSSNEGYAKSGC 1046
>SB_45651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/81 (22%), Positives = 36/81 (44%)
Frame = +1
Query: 250 YNKRFQRLESHVVTLARSVAHLSSEMRTQHLVMQEMDTIRAEIAALRHMYKSQQHIRSGH 429
YN+ + V + + H S + L+ ++ + ++AE L +++++
Sbjct: 115 YNRICVKAIKEVPVMGEPIPH--SYFTVEELIAKKREELKAE-KKLPFIHRAEFEALVTD 171
Query: 430 QRHSDPYSFSNPDRVKRLTKF 492
SD +PD VK +TKF
Sbjct: 172 TTRSDALDIEDPDDVKEITKF 192
>SB_24133| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 542
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -3
Query: 130 NLASQECLCSEMGFRTLSSCSTSAYMFSRPRSWR 29
++A ++ LC +GF L+ C S FS+ WR
Sbjct: 400 DIAIEDALCGLVGFHALTGCD-SVSAFSQKGKWR 432
>SB_35001| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -2
Query: 362 VSISCMTRCWVLISLDRCATERASVTTCDSSRWNRLLYPCSPVSSCA 222
VS + C VLI++DR + T +R+ L P + + +CA
Sbjct: 31 VSTAVSIECLVLIAVDRFCAVIYPIRTATRTRYRAFLIPLTWIIACA 77
>SB_24053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2557
Score = 28.3 bits (60), Expect = 6.6
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +3
Query: 510 LMRLFLKKLGYEKYAALLEKEKVGAAELPYVGEDRLRALGVPLGPRMRILKEAGIHQ 680
LM +K++G ++AAL E+E+ + E RLR G L R+L E H+
Sbjct: 1768 LMEAMMKQMGETQWAALSERERQARLVKLKLQEKRLREDG-KLDEASRLLGEGRKHE 1823
>SB_21208| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 413 CCWDLYICLRAAISARMVSISCMTRC 336
CCW+ + C +S+ S +C TRC
Sbjct: 425 CCWECFQCPEGTVSSEPGSTNC-TRC 449
>SB_26060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2671
Score = 27.9 bits (59), Expect = 8.8
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -2
Query: 413 CCWDLYICLRAAISARMVSISC 348
CCW+ + C IS++ S SC
Sbjct: 515 CCWECFQCPEGTISSKESSTSC 536
>SB_53355| Best HMM Match : CHCH (HMM E-Value=3.3e-07)
Length = 599
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = +2
Query: 329 EPSTSSCRRWTPSAQRSRPSGICTSPSNTSVQVTS 433
+ TS R WTP+ ++++P+ + +S +S +T+
Sbjct: 518 DDKTSHARIWTPAMRKTKPTTLTSSHKMSSRSITA 552
>SB_45039| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 235
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = +3
Query: 285 GDAGALRRAPVQRNENPAPRHAGDGHHPRRDRGPQAYVQVPATHP 419
G+ GA +R+ + +NP P+H G ++ P T P
Sbjct: 165 GNCGAGKRSRTRVCDNPVPKHGGKDCTGPNSESMDCHILCPETQP 209
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,961,001
Number of Sequences: 59808
Number of extensions: 431448
Number of successful extensions: 1445
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1441
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1913853903
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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