Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0817
(720 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g48680.1 68418.m06024 sterile alpha motif (SAM) domain-contai... 45 4e-05
At3g07170.1 68416.m00854 sterile alpha motif (SAM) domain-contai... 44 8e-05
At1g70180.2 68414.m08076 sterile alpha motif (SAM) domain-contai... 37 0.012
At5g24650.1 68418.m02911 mitochondrial import inner membrane tra... 37 0.015
At3g49560.1 68416.m05416 mitochondrial import inner membrane tra... 35 0.062
At5g53960.1 68418.m06713 hypothetical protein 30 1.3
At1g53490.1 68414.m06064 bZIP protein 30 1.3
At5g26340.1 68418.m03148 hexose transporter, putative strong sim... 29 3.1
At5g32161.1 68418.m03792 hypothetical protein 27 9.5
At5g20750.1 68418.m02466 Ulp1 protease family protein contains P... 27 9.5
At4g27840.1 68417.m03998 expressed protein 27 9.5
At1g11310.1 68414.m01299 seven transmembrane MLO family protein ... 27 9.5
At1g05820.1 68414.m00609 protease-associated (PA) domain-contain... 27 9.5
>At5g48680.1 68418.m06024 sterile alpha motif (SAM)
domain-containing protein contains Pfam profile PF00536:
SAM domain (Sterile alpha motif)
Length = 206
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/50 (42%), Positives = 32/50 (64%)
Frame = +3
Query: 522 FLKKLGYEKYAALLEKEKVGAAELPYVGEDRLRALGVPLGPRMRILKEAG 671
FL+ LG EKY+ + E+V L ++ +D L+AL +P+GPR +IL G
Sbjct: 153 FLESLGLEKYSTAFQVEEVDMDALRHMTDDDLKALLIPMGPRKKILLALG 202
>At3g07170.1 68416.m00854 sterile alpha motif (SAM)
domain-containing protein contains Pfam profile PF00536:
SAM domain (Sterile alpha motif)
Length = 203
Score = 44.4 bits (100), Expect = 8e-05
Identities = 20/50 (40%), Positives = 32/50 (64%)
Frame = +3
Query: 522 FLKKLGYEKYAALLEKEKVGAAELPYVGEDRLRALGVPLGPRMRILKEAG 671
FL+ LG EKY+ + E+V L ++ +D L+A+ +P+GPR +IL G
Sbjct: 151 FLESLGLEKYSTAFQVEEVDMDALMHMTDDDLKAMLIPMGPRKKILLALG 200
>At1g70180.2 68414.m08076 sterile alpha motif (SAM)
domain-containing protein contains Pfam profile PF00536:
SAM domain (Sterile alpha motif)
Length = 460
Score = 37.1 bits (82), Expect = 0.012
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +3
Query: 522 FLKKLGYEKYAALLEKEKVGAAELPYVGEDRLRALGVPLGPRMRILK 662
FL +G KY+ ++E+V + + E L+ L +P+GPR +IL+
Sbjct: 406 FLNSIGLGKYSLAFKREEVDMTTIKQMKESDLKDLIIPMGPRKKILQ 452
>At5g24650.1 68418.m02911 mitochondrial import inner membrane
translocase subunit Tim17/Tim22/Tim23 family protein
contains Pfam PF02466: Mitochondrial import inner
membrane translocase subunit Tim17
Length = 259
Score = 36.7 bits (81), Expect = 0.015
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +3
Query: 516 RLFLKKLGYEKYAALLEKEKVGAAELPYVGEDRLRALGVPLGPRMRIL 659
R L KLG EKY +K + LP + + LR + +P GPR+ IL
Sbjct: 195 RSMLLKLGLEKYEKNFKKGLLADPTLPLLTDSALRDVSIPPGPRLLIL 242
>At3g49560.1 68416.m05416 mitochondrial import inner membrane
translocase subunit Tim17/Tim22/Tim23 family protein
contains Pfam PF02466: Mitochondrial import inner
membrane translocase subunit Tim17
Length = 261
Score = 34.7 bits (76), Expect = 0.062
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +3
Query: 516 RLFLKKLGYEKYAALLEKEKVGAAELPYVGEDRLRALGVPLGPRMRIL 659
R L KLG EKY +K + LP + + L+ +P GPR+ IL
Sbjct: 200 RTMLVKLGLEKYEKNFKKGLLTDPTLPLLTDSALKDANIPPGPRLMIL 247
>At5g53960.1 68418.m06713 hypothetical protein
Length = 189
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +3
Query: 525 LKKLGYEKYAALLEKEKVGAAELPYVGEDRLRALGVPLGPRMRILKE 665
+ L Y+ Y +LEKE AAEL V D + V L + R ++E
Sbjct: 63 MASLTYKLYRFILEKEDEAAAELNAVDTDSIETKLVKLENKQRYIRE 109
>At1g53490.1 68414.m06064 bZIP protein
Length = 229
Score = 30.3 bits (65), Expect = 1.3
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Frame = +1
Query: 256 KRFQRLESHVVTLARSVAHLS---SEMRTQHLVMQEM-DTIRAEIAALRHMYKSQQHIRS 423
KR Q +E V L + L SE Q + EM D +R+E +++ + Q +
Sbjct: 57 KRCQMMEQEVENLTKDKQELQEKFSEKSRQKRKLDEMYDQLRSEYESVKRT--AIQPANN 114
Query: 424 GHQRHSDPYSFSNP 465
+ RH +P FSNP
Sbjct: 115 FYPRHQEPDFFSNP 128
>At5g26340.1 68418.m03148 hexose transporter, putative strong
similarity to hexose transporter, Lycopersicon
esculentum, GI:5734440; contains Pfam profile PF00083:
major facilitator superfamily protein
Length = 526
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +3
Query: 12 DARAIRRQLRGLENMYAEVLQLLSVRKPISEHKHSWEARLSSKRR 146
+ +A+ R++RG +N+ E LL + E KH + L + R
Sbjct: 238 EGKAVLRRIRGTDNVEPEFADLLEASRLAKEVKHPFRNLLQRRNR 282
>At5g32161.1 68418.m03792 hypothetical protein
Length = 193
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 30 RQLRGLENMYAEVLQLLSVRKPISEHKHS 116
R+ RG + ++ L L + KPIS H HS
Sbjct: 145 RKKRGEDKVFGSGLDLHRITKPISAHYHS 173
>At5g20750.1 68418.m02466 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 944
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +3
Query: 285 GDAGALRRAPVQRNENPAPRHAGDGHHPRRDRGPQAYV 398
G + + P ++++N DG HPR ++G A+V
Sbjct: 439 GPSNPICNPPSRKSKNSGFAAPADGSHPRGEKGSAAFV 476
>At4g27840.1 68417.m03998 expressed protein
Length = 260
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 262 FQRLESHVVTLARSVAHLSS-EMRTQHLVMQEMDTIRAEIAALRHMYKSQQHIRSGHQR 435
F RL+S +L + S + TQH + ++D + AEIAA+ + + G R
Sbjct: 85 FNRLKSATESLMEDGSTADSLDNPTQHCLQSKLDPVFAEIAAIGGNHNKDLELEFGSPR 143
>At1g11310.1 68414.m01299 seven transmembrane MLO family protein /
MLO-like protein 2 (MLO2) idenctical to membrane protein
Mlo2 [Arabidopsis thaliana] gi|14091574|gb|AAK53795;
similar to Mlo [Hordeum vulgare subsp. vulgare]
gi|1877221|emb|CAB06083 SWISS-PROT:P93766
Length = 573
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 330 NPAPRHAGDGHHPRRDRGPQAYVQVPATHPFRSPA 434
+P+PR++G GHH + P++ Q T S A
Sbjct: 510 SPSPRYSGHGHHEHQFWDPESQHQEAETSTHHSLA 544
>At1g05820.1 68414.m00609 protease-associated (PA) domain-containing
protein contains weak similarity to protease associated
(PA) domain proteins, Pfam:PF02225
Length = 441
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 131 VVEASLWQHVLAPLQLSEQSPRQDKRRSSN 220
V AS+W HV +P + EQ ++SSN
Sbjct: 204 VFVASVWSHVTSPKKNDEQYDELSPKKSSN 233
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,205,754
Number of Sequences: 28952
Number of extensions: 276070
Number of successful extensions: 941
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 941
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1565336320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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