BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0798 (723 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At2g39630.2 68415.m04859 glycosyl transferase family 2 protein s... 55 5e-08 At2g39630.1 68415.m04858 glycosyl transferase family 2 protein s... 55 5e-08 At1g20575.1 68414.m02567 dolichyl-phosphate beta-D-mannosyltrans... 30 1.8 At2g40980.1 68415.m05062 expressed protein 28 5.5 At2g05840.1 68415.m00632 20S proteasome alpha subunit A2 (PAA2) ... 28 5.5 At5g35590.1 68418.m04237 20S proteasome alpha subunit A1 (PAA1) ... 28 7.2 >At2g39630.2 68415.m04859 glycosyl transferase family 2 protein similar to dolichyl-phosphate beta-glucosyltransferase from Saccharomyces cerevisiae [SP|P40350]; contains Pfam glycosyltransferase group 2 domain PF00535 Length = 236 Score = 54.8 bits (126), Expect = 5e-08 Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 4/106 (3%) Frame = +2 Query: 413 PAYNEEKRLPPMLDETIEFLENRQKENPSYKYE*S**VTEVKTAQLK*PRATP*NMV--- 583 PAYNEE RLP L+ET+++L++R + S+ +E V V + + + + Sbjct: 73 PAYNEELRLPAALEETMDYLQDRASRDKSFSFE----VVIVDDGSVDGTKRVAFDFIRKY 128 Query: 584 -VTK*NA*S**RTEEKGGAVRLGIQSSRGATILFADADGASKFEDL 718 + + + KG A+R G+ SRG +L DADGA+K DL Sbjct: 129 TIDNIRVIPLGKNQGKGEAIRKGMLHSRGQLLLMLDADGATKVTDL 174 Score = 39.1 bits (87), Expect = 0.003 Identities = 18/46 (39%), Positives = 28/46 (60%) Frame = +1 Query: 511 IIIVSDGSKDSTVKVAESYSIKYGSDKVKCLELIKNRGKRRSSQTG 648 ++IV DGS D T +VA + KY D ++ + L KN+GK + + G Sbjct: 106 VVIVDDGSVDGTKRVAFDFIRKYTIDNIRVIPLGKNQGKGEAIRKG 151 >At2g39630.1 68415.m04858 glycosyl transferase family 2 protein similar to dolichyl-phosphate beta-glucosyltransferase from Saccharomyces cerevisiae [SP|P40350]; contains Pfam glycosyltransferase group 2 domain PF00535 Length = 336 Score = 54.8 bits (126), Expect = 5e-08 Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 4/106 (3%) Frame = +2 Query: 413 PAYNEEKRLPPMLDETIEFLENRQKENPSYKYE*S**VTEVKTAQLK*PRATP*NMV--- 583 PAYNEE RLP L+ET+++L++R + S+ +E V V + + + + Sbjct: 73 PAYNEELRLPAALEETMDYLQDRASRDKSFSFE----VVIVDDGSVDGTKRVAFDFIRKY 128 Query: 584 -VTK*NA*S**RTEEKGGAVRLGIQSSRGATILFADADGASKFEDL 718 + + + KG A+R G+ SRG +L DADGA+K DL Sbjct: 129 TIDNIRVIPLGKNQGKGEAIRKGMLHSRGQLLLMLDADGATKVTDL 174 Score = 39.1 bits (87), Expect = 0.003 Identities = 18/46 (39%), Positives = 28/46 (60%) Frame = +1 Query: 511 IIIVSDGSKDSTVKVAESYSIKYGSDKVKCLELIKNRGKRRSSQTG 648 ++IV DGS D T +VA + KY D ++ + L KN+GK + + G Sbjct: 106 VVIVDDGSVDGTKRVAFDFIRKYTIDNIRVIPLGKNQGKGEAIRKG 151 >At1g20575.1 68414.m02567 dolichyl-phosphate beta-D-mannosyltransferase, putative / dolichol-phosphate mannosyltransferase, putative / mannose-P-dolichol synthase, putative similar to DPM1 from Homo sapiens [SP|O60762]; member of glycosyltransferase family 2 Length = 246 Score = 29.9 bits (64), Expect = 1.8 Identities = 15/47 (31%), Positives = 25/47 (53%) Frame = +1 Query: 511 IIIVSDGSKDSTVKVAESYSIKYGSDKVKCLELIKNRGKRRSSQTGH 651 II+V DGS D T ++ + YG D++ L++ R K+ T + Sbjct: 46 IIVVDDGSPDGTQEIVKQLQQLYGEDRI----LLRARAKKLGLGTAY 88 >At2g40980.1 68415.m05062 expressed protein Length = 617 Score = 28.3 bits (60), Expect = 5.5 Identities = 20/52 (38%), Positives = 28/52 (53%) Frame = -2 Query: 491 FLFVGSPRTQLFHPTWVAVFFLHYMQEQLHLS*QILLQV*RGISV*YLLSNH 336 FL+VGSP +QL P W + + +Q Q + I+ Q RG+S YL H Sbjct: 348 FLYVGSPPSQL-EPAWEDMNLWYQVQRQTKIL-SIMKQ--RGLSSKYLPQLH 395 >At2g05840.1 68415.m00632 20S proteasome alpha subunit A2 (PAA2) identical to GB:AF043519 Length = 246 Score = 28.3 bits (60), Expect = 5.5 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = +2 Query: 455 ETIEFLENRQKENPSYKYE 511 E + FLE + KENP++ Y+ Sbjct: 174 EAVNFLEKKMKENPAFTYD 192 >At5g35590.1 68418.m04237 20S proteasome alpha subunit A1 (PAA1) (PRC1) identical to proteasome subunit alpha type 6-1 SP:O81146 GI:12643647 from [Arabidopsis thaliana]; identical to cDNA proteasome subunit prc1 GI:2511587 Length = 246 Score = 27.9 bits (59), Expect = 7.2 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = +2 Query: 455 ETIEFLENRQKENPSYKYE 511 E + FLE + KENPS+ ++ Sbjct: 174 EAVNFLEKKMKENPSFTFD 192 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,241,939 Number of Sequences: 28952 Number of extensions: 234412 Number of successful extensions: 566 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 553 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 566 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1575119672 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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