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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0798
         (723 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g39630.2 68415.m04859 glycosyl transferase family 2 protein s...    55   5e-08
At2g39630.1 68415.m04858 glycosyl transferase family 2 protein s...    55   5e-08
At1g20575.1 68414.m02567 dolichyl-phosphate beta-D-mannosyltrans...    30   1.8  
At2g40980.1 68415.m05062 expressed protein                             28   5.5  
At2g05840.1 68415.m00632 20S proteasome alpha subunit A2 (PAA2) ...    28   5.5  
At5g35590.1 68418.m04237 20S proteasome alpha subunit A1 (PAA1) ...    28   7.2  

>At2g39630.2 68415.m04859 glycosyl transferase family 2 protein
           similar to dolichyl-phosphate beta-glucosyltransferase
           from Saccharomyces cerevisiae [SP|P40350]; contains Pfam
           glycosyltransferase group 2 domain PF00535
          Length = 236

 Score = 54.8 bits (126), Expect = 5e-08
 Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
 Frame = +2

Query: 413 PAYNEEKRLPPMLDETIEFLENRQKENPSYKYE*S**VTEVKTAQLK*PRATP*NMV--- 583
           PAYNEE RLP  L+ET+++L++R   + S+ +E    V  V    +   +    + +   
Sbjct: 73  PAYNEELRLPAALEETMDYLQDRASRDKSFSFE----VVIVDDGSVDGTKRVAFDFIRKY 128

Query: 584 -VTK*NA*S**RTEEKGGAVRLGIQSSRGATILFADADGASKFEDL 718
            +         + + KG A+R G+  SRG  +L  DADGA+K  DL
Sbjct: 129 TIDNIRVIPLGKNQGKGEAIRKGMLHSRGQLLLMLDADGATKVTDL 174



 Score = 39.1 bits (87), Expect = 0.003
 Identities = 18/46 (39%), Positives = 28/46 (60%)
 Frame = +1

Query: 511 IIIVSDGSKDSTVKVAESYSIKYGSDKVKCLELIKNRGKRRSSQTG 648
           ++IV DGS D T +VA  +  KY  D ++ + L KN+GK  + + G
Sbjct: 106 VVIVDDGSVDGTKRVAFDFIRKYTIDNIRVIPLGKNQGKGEAIRKG 151


>At2g39630.1 68415.m04858 glycosyl transferase family 2 protein
           similar to dolichyl-phosphate beta-glucosyltransferase
           from Saccharomyces cerevisiae [SP|P40350]; contains Pfam
           glycosyltransferase group 2 domain PF00535
          Length = 336

 Score = 54.8 bits (126), Expect = 5e-08
 Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
 Frame = +2

Query: 413 PAYNEEKRLPPMLDETIEFLENRQKENPSYKYE*S**VTEVKTAQLK*PRATP*NMV--- 583
           PAYNEE RLP  L+ET+++L++R   + S+ +E    V  V    +   +    + +   
Sbjct: 73  PAYNEELRLPAALEETMDYLQDRASRDKSFSFE----VVIVDDGSVDGTKRVAFDFIRKY 128

Query: 584 -VTK*NA*S**RTEEKGGAVRLGIQSSRGATILFADADGASKFEDL 718
            +         + + KG A+R G+  SRG  +L  DADGA+K  DL
Sbjct: 129 TIDNIRVIPLGKNQGKGEAIRKGMLHSRGQLLLMLDADGATKVTDL 174



 Score = 39.1 bits (87), Expect = 0.003
 Identities = 18/46 (39%), Positives = 28/46 (60%)
 Frame = +1

Query: 511 IIIVSDGSKDSTVKVAESYSIKYGSDKVKCLELIKNRGKRRSSQTG 648
           ++IV DGS D T +VA  +  KY  D ++ + L KN+GK  + + G
Sbjct: 106 VVIVDDGSVDGTKRVAFDFIRKYTIDNIRVIPLGKNQGKGEAIRKG 151


>At1g20575.1 68414.m02567 dolichyl-phosphate
           beta-D-mannosyltransferase, putative /
           dolichol-phosphate mannosyltransferase, putative /
           mannose-P-dolichol synthase, putative similar to DPM1
           from Homo sapiens [SP|O60762]; member of
           glycosyltransferase family 2
          Length = 246

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +1

Query: 511 IIIVSDGSKDSTVKVAESYSIKYGSDKVKCLELIKNRGKRRSSQTGH 651
           II+V DGS D T ++ +     YG D++    L++ R K+    T +
Sbjct: 46  IIVVDDGSPDGTQEIVKQLQQLYGEDRI----LLRARAKKLGLGTAY 88


>At2g40980.1 68415.m05062 expressed protein 
          Length = 617

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 20/52 (38%), Positives = 28/52 (53%)
 Frame = -2

Query: 491 FLFVGSPRTQLFHPTWVAVFFLHYMQEQLHLS*QILLQV*RGISV*YLLSNH 336
           FL+VGSP +QL  P W  +   + +Q Q  +   I+ Q  RG+S  YL   H
Sbjct: 348 FLYVGSPPSQL-EPAWEDMNLWYQVQRQTKIL-SIMKQ--RGLSSKYLPQLH 395


>At2g05840.1 68415.m00632 20S proteasome alpha subunit A2 (PAA2)
           identical to GB:AF043519
          Length = 246

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 455 ETIEFLENRQKENPSYKYE 511
           E + FLE + KENP++ Y+
Sbjct: 174 EAVNFLEKKMKENPAFTYD 192


>At5g35590.1 68418.m04237 20S proteasome alpha subunit A1 (PAA1)
           (PRC1) identical to proteasome subunit alpha type 6-1
           SP:O81146 GI:12643647 from [Arabidopsis thaliana];
           identical to cDNA proteasome subunit prc1 GI:2511587
          Length = 246

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 455 ETIEFLENRQKENPSYKYE 511
           E + FLE + KENPS+ ++
Sbjct: 174 EAVNFLEKKMKENPSFTFD 192


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,241,939
Number of Sequences: 28952
Number of extensions: 234412
Number of successful extensions: 566
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 566
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1575119672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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