Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0797
(627 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 149 2e-36
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 149 2e-36
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 149 2e-36
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 149 2e-36
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 96 1e-20
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 90 1e-18
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 64 7e-11
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 62 4e-10
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 37 0.013
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 37 0.013
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 34 0.067
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 34 0.089
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 33 0.21
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 33 0.21
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 32 0.27
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 31 0.63
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 31 0.63
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 30 1.4
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 30 1.4
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 29 2.5
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 2.5
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 29 3.3
At5g06810.1 68418.m00770 mitochondrial transcription termination... 28 5.8
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 149 bits (360), Expect = 2e-36
Identities = 70/85 (82%), Positives = 77/85 (90%)
Frame = +3
Query: 255 IDIALWKFETSKYYVTIIDAPLHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 434
IDIALWKFET+KYY T+IDAP HRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQ
Sbjct: 73 IDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQ 132
Query: 435 TREHALLAFTLGVKQLIVGVNKMDS 509
TREHALLAFTLGVKQ+I NKMD+
Sbjct: 133 TREHALLAFTLGVKQMICCCNKMDA 157
Score = 138 bits (333), Expect = 4e-33
Identities = 65/72 (90%), Positives = 66/72 (91%)
Frame = +1
Query: 40 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 219
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 220 DKLKAERERGIT 255
DKLKAERERGIT
Sbjct: 61 DKLKAERERGIT 72
Score = 36.7 bits (81), Expect = 0.013
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +2
Query: 509 TEPPYSEPRFEEIKKEVSSYIKKI 580
T P YS+ R++EI KEVSSY+KK+
Sbjct: 158 TTPKYSKARYDEIIKEVSSYLKKV 181
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 149 bits (360), Expect = 2e-36
Identities = 70/85 (82%), Positives = 77/85 (90%)
Frame = +3
Query: 255 IDIALWKFETSKYYVTIIDAPLHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 434
IDIALWKFET+KYY T+IDAP HRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQ
Sbjct: 73 IDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQ 132
Query: 435 TREHALLAFTLGVKQLIVGVNKMDS 509
TREHALLAFTLGVKQ+I NKMD+
Sbjct: 133 TREHALLAFTLGVKQMICCCNKMDA 157
Score = 138 bits (333), Expect = 4e-33
Identities = 65/72 (90%), Positives = 66/72 (91%)
Frame = +1
Query: 40 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 219
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 220 DKLKAERERGIT 255
DKLKAERERGIT
Sbjct: 61 DKLKAERERGIT 72
Score = 36.7 bits (81), Expect = 0.013
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +2
Query: 509 TEPPYSEPRFEEIKKEVSSYIKKI 580
T P YS+ R++EI KEVSSY+KK+
Sbjct: 158 TTPKYSKARYDEIIKEVSSYLKKV 181
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 149 bits (360), Expect = 2e-36
Identities = 70/85 (82%), Positives = 77/85 (90%)
Frame = +3
Query: 255 IDIALWKFETSKYYVTIIDAPLHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 434
IDIALWKFET+KYY T+IDAP HRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQ
Sbjct: 73 IDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQ 132
Query: 435 TREHALLAFTLGVKQLIVGVNKMDS 509
TREHALLAFTLGVKQ+I NKMD+
Sbjct: 133 TREHALLAFTLGVKQMICCCNKMDA 157
Score = 138 bits (333), Expect = 4e-33
Identities = 65/72 (90%), Positives = 66/72 (91%)
Frame = +1
Query: 40 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 219
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 220 DKLKAERERGIT 255
DKLKAERERGIT
Sbjct: 61 DKLKAERERGIT 72
Score = 36.7 bits (81), Expect = 0.013
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +2
Query: 509 TEPPYSEPRFEEIKKEVSSYIKKI 580
T P YS+ R++EI KEVSSY+KK+
Sbjct: 158 TTPKYSKARYDEIIKEVSSYLKKV 181
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 149 bits (360), Expect = 2e-36
Identities = 70/85 (82%), Positives = 77/85 (90%)
Frame = +3
Query: 255 IDIALWKFETSKYYVTIIDAPLHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 434
IDIALWKFET+KYY T+IDAP HRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQ
Sbjct: 73 IDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQ 132
Query: 435 TREHALLAFTLGVKQLIVGVNKMDS 509
TREHALLAFTLGVKQ+I NKMD+
Sbjct: 133 TREHALLAFTLGVKQMICCCNKMDA 157
Score = 138 bits (333), Expect = 4e-33
Identities = 65/72 (90%), Positives = 66/72 (91%)
Frame = +1
Query: 40 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 219
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 220 DKLKAERERGIT 255
DKLKAERERGIT
Sbjct: 61 DKLKAERERGIT 72
Score = 36.7 bits (81), Expect = 0.013
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +2
Query: 509 TEPPYSEPRFEEIKKEVSSYIKKI 580
T P YS+ R++EI KEVSSY+KK+
Sbjct: 158 TTPKYSKARYDEIIKEVSSYLKKV 181
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 96.3 bits (229), Expect = 1e-20
Identities = 45/84 (53%), Positives = 58/84 (69%)
Frame = +3
Query: 255 IDIALWKFETSKYYVTIIDAPLHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 434
+++ FET TI+DAP H+ ++ NMI+G SQAD VL+++A GEFE G + GQ
Sbjct: 167 VEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQ 226
Query: 435 TREHALLAFTLGVKQLIVGVNKMD 506
TREH LA TLGV +LIV VNKMD
Sbjct: 227 TREHVQLAKTLGVSKLIVVVNKMD 250
Score = 70.9 bits (166), Expect = 6e-13
Identities = 30/69 (43%), Positives = 49/69 (71%)
Frame = +1
Query: 49 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 228
+K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ + S+ A+++D
Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTN 157
Query: 229 KAERERGIT 255
+ ER +G T
Sbjct: 158 EEERLKGKT 166
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 90.2 bits (214), Expect = 1e-18
Identities = 42/96 (43%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Frame = +3
Query: 261 IALWKFETSKYYVTIIDAPLHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK-NGQT 437
+A+ F + +++V ++D+P H+DF+ NMI G +QAD A+L++ A G FEAG GQT
Sbjct: 307 VAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAGFDNLKGQT 366
Query: 438 REHALLAFTLGVKQLIVGVNKMDSLNHHTVSPDLRK 545
REHA + GV+Q+IV +NKMD + + DL K
Sbjct: 367 REHARVLRGFGVEQVIVAINKMDIVGYSKERFDLIK 402
Score = 85.4 bits (202), Expect = 3e-17
Identities = 36/67 (53%), Positives = 50/67 (74%)
Frame = +1
Query: 55 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 234
+ +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAE 297
Query: 235 ERERGIT 255
ERERGIT
Sbjct: 298 ERERGIT 304
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 64.1 bits (149), Expect = 7e-11
Identities = 33/87 (37%), Positives = 51/87 (58%)
Frame = +3
Query: 255 IDIALWKFETSKYYVTIIDAPLHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 434
I+ A ++ET + +D P H D++KNMITG +Q D A+L+V+ G Q
Sbjct: 130 INTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP-------Q 182
Query: 435 TREHALLAFTLGVKQLIVGVNKMDSLN 515
T+EH LLA +GV ++V +NK D ++
Sbjct: 183 TKEHILLAKQVGVPDMVVFLNKEDQVD 209
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 37 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEK 171
K ++K H+NI IGHVD GK+T T L I +K+++
Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE 116
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 61.7 bits (143), Expect = 4e-10
Identities = 31/78 (39%), Positives = 47/78 (60%)
Frame = +3
Query: 273 KFETSKYYVTIIDAPLHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 452
++ET+K + +D P H D++KNMITG +Q D +L+V+ G QT+EH L
Sbjct: 124 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP-------QTKEHIL 176
Query: 453 LAFTLGVKQLIVGVNKMD 506
LA +GV L+ +NK+D
Sbjct: 177 LARQVGVPSLVCFLNKVD 194
Score = 32.7 bits (71), Expect = 0.21
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 46 KEKTHINIVVIGHVDSGKSTTT 111
+ K H+N+ IGHVD GK+T T
Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLT 84
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 36.7 bits (81), Expect = 0.013
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +3
Query: 282 TSKYYVTIIDAPLHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 461
T + +V+ +D P H + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 462 TLGVKQLIVGVNKMDSLN 515
+ +K +I+ NK+D +N
Sbjct: 178 MMRLKHIIILQNKIDLIN 195
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 36.7 bits (81), Expect = 0.013
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +3
Query: 282 TSKYYVTIIDAPLHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 461
T + +V+ +D P H + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 462 TLGVKQLIVGVNKMDSLN 515
+ +K +I+ NK+D +N
Sbjct: 178 MMRLKHIIILQNKIDLIN 195
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 34.3 bits (75), Expect = 0.067
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Frame = +3
Query: 276 FETSKY----YVTIIDAPLHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 443
FE SK +V+ +D P H + M+ G + D A+L++AA QT E
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANE------TCPQPQTSE 165
Query: 444 HALLAFTLGVKQLIVGVNKMDSLNHH 521
H + +K +I+ NK+D + +
Sbjct: 166 HLAAVEIMQLKHIIILQNKIDLIQEN 191
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 33.9 bits (74), Expect = 0.089
Identities = 21/76 (27%), Positives = 36/76 (47%)
Frame = +3
Query: 294 YVTIIDAPLHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 473
+V+ +D P H + M+ G + D A+LI+AA QT EH + +
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAANE------TCPQPQTAEHLASVDMMHL 173
Query: 474 KQLIVGVNKMDSLNHH 521
K +I+ NK+D + +
Sbjct: 174 KDIIIIQNKIDLIQEN 189
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 32.7 bits (71), Expect = 0.21
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 64 NIVVIGHVDSGKSTTTGHLIYKCGG 138
NI ++ HVD GK+T HLI GG
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG 35
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 291 YYVTIIDAPLHRDFIKNMITGTSQADCAVLIVAAGTG 401
Y + +ID+P H DF + T +D A+++V A G
Sbjct: 74 YSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 32.7 bits (71), Expect = 0.21
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 52 KTHINIVVIGHVDSGKSTTTGHLIYKCG 135
K + NI ++ H+D+GK+TTT ++Y G
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG 121
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 32.3 bits (70), Expect = 0.27
Identities = 35/123 (28%), Positives = 48/123 (39%)
Frame = +1
Query: 64 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 243
N +I H+D GKST L+ G + R + K F LD + ERE
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDM-----------KEQF-----LDNMDLERE 131
Query: 244 RGITSILLSGSSKLASTMLPSLMLLYTEISSRT*SQEPLRLIALCSS*LPVPVNSKLVSL 423
RGIT L + + P + L S E R +A C L V S+ V
Sbjct: 132 RGITIKLQAARMRYVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEA 191
Query: 424 RTV 432
+T+
Sbjct: 192 QTL 194
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 31.1 bits (67), Expect = 0.63
Identities = 22/64 (34%), Positives = 34/64 (53%)
Frame = +1
Query: 64 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 243
NI + H+DSGK+T T +++ G R E E ++ G G+ +D + ERE
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTG----RIHEIHEVRGRD-GVGA-----KMDSMDLERE 116
Query: 244 RGIT 255
+GIT
Sbjct: 117 KGIT 120
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 31.1 bits (67), Expect = 0.63
Identities = 22/64 (34%), Positives = 34/64 (53%)
Frame = +1
Query: 64 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 243
NI + H+DSGK+T T +++ G R E E ++ G G+ +D + ERE
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTG----RIHEIHEVRGRD-GVGA-----KMDSMDLERE 116
Query: 244 RGIT 255
+GIT
Sbjct: 117 KGIT 120
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +3
Query: 255 IDIALWKFETSKYYVTIIDAPLHRDFIKNMITGTSQADCAVLIVAAGTG 401
+ + L + Y I+D P H +F M AD AVLIV A G
Sbjct: 197 MSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +3
Query: 255 IDIALWKFETSKYYVTIIDAPLHRDFIKNMITGTSQADCAVLIVAAGTG 401
+ + L + Y I+D P H +F M AD AVLIV A G
Sbjct: 197 MSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 29.1 bits (62), Expect = 2.5
Identities = 29/76 (38%), Positives = 34/76 (44%)
Frame = +1
Query: 28 D*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKY 207
D K EK N +I H+D GKST L+ G I K G G +Y
Sbjct: 57 DLTKFPSEKIR-NFSIIAHIDHGKSTLADRLMELTGTIKK-------------GHGQPQY 102
Query: 208 AWVLDKLKAERERGIT 255
LDKL +RERGIT
Sbjct: 103 ---LDKL--QRERGIT 113
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 64 NIVVIGHVDSGKSTTTGHLIYKCG 135
N+ VI HVD GKST T L+ G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 297 VTIIDAPLHRDFIKNMITGTSQADCAVLIVAAGTG 401
+T +D P H F + G + D VL+VAA G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At5g06810.1 68418.m00770 mitochondrial transcription termination
factor-related / mTERF-related contains Pfam profile
PF02536: mTERF
Length = 1141
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +1
Query: 115 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITSILLS 270
H + G+D + I K KEA+E+ S++ + K+KA + G + + LS
Sbjct: 174 HHVLCYSGVDPKRIGKIFKEAREV--FSYETGVLASKIKAYEDLGFSRLFLS 223
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,605,735
Number of Sequences: 28952
Number of extensions: 275491
Number of successful extensions: 868
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 865
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1275599520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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