Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0781
         (732 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    29   0.051
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    29   0.051
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    28   0.068
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.9  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   3.4  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   5.9  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   5.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.9  

>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 28.7 bits (61), Expect = 0.051
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +2

Query: 188 DCCLPLAMKGNLGAGVRRDAVDPPIRSPGCRTRFVRLFSVS 310
           DC    +   NL A VR  + + P R P C  RF +  SV+
Sbjct: 26  DCNKSFSQAANLTAHVRTHSGEKPFRCPVCDRRFSQSSSVT 66


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 28.7 bits (61), Expect = 0.051
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +2

Query: 188 DCCLPLAMKGNLGAGVRRDAVDPPIRSPGCRTRFVRLFSVS 310
           DC    +   NL A VR  + + P R P C  RF +  SV+
Sbjct: 282 DCNKSFSQAANLTAHVRTHSGEKPFRCPVCDRRFSQSSSVT 322


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 28.3 bits (60), Expect = 0.068
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = -1

Query: 294 RTKRVLQPGERMGGSTASRRTPAPRF--PFIARGRQQSAPTRSDTD 163
           RT+RV +PG + G  TA  + P   F    +AR + + A  R  T+
Sbjct: 210 RTRRVKKPGAKQGAPTAEEKRPRTAFSGAQLARLKHEFAENRYLTE 255


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 257  ADRRRLVVRLPQGSPSSLEADNS 189
            ADRR+LV+ +P    S   ADN+
Sbjct: 2056 ADRRKLVMGMPMYGQSFSLADNN 2078


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
 Frame = -3

Query: 418 CRASVTLALLVDTLSISIR--SDTICLRTSTKSHNTVAADTKQTHKASPAARR 266
           CR +  L +L  T S S R     I  RT T+ H T + +T+ T + +PA+ R
Sbjct: 251 CRDN-RLLVLAGTSSPSNRFTRHLIQRRTHTR-HTTTSHNTRGTPRTTPASSR 301


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -3

Query: 397 ALLVDTLSISIRSDTICLRTSTKSHNTVAADTKQTHK 287
           ALL +  S+ +R+D   +  +   +N VA      HK
Sbjct: 140 ALLTERSSLVLRNDFRLMSNNLNKNNVVATGRFTFHK 176


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
 Frame = -2

Query: 227 PQGSPSSLEADNSLPPR---DPTPTKASNS 147
           PQG+PS     +SLP +      PT +S S
Sbjct: 71  PQGAPSPSSTPSSLPTQRTSTSNPTYSSRS 100


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 212 SSLEADNSLPPRDPTPTKASNS 147
           ++L ++N LPP  PT  K+  +
Sbjct: 672 NALMSNNILPPESPTRDKSKQN 693


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,947
Number of Sequences: 336
Number of extensions: 3630
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)