Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0781
(732 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g54680.1 68418.m06809 basic helix-loop-helix (bHLH) family pr... 33 0.26
At5g42140.1 68418.m05130 zinc finger protein, putative / regulat... 30 1.4
At2g36410.2 68415.m04470 expressed protein contains Pfam profile... 30 1.8
At2g36410.1 68415.m04469 expressed protein contains Pfam profile... 30 1.8
At2g26150.1 68415.m03138 heat shock transcription factor family ... 30 1.8
At3g14750.1 68416.m01865 expressed protein weak similarity to Se... 29 2.4
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 29 2.4
At4g27595.1 68417.m03964 protein transport protein-related low s... 29 3.2
At1g68750.1 68414.m07859 phosphoenolpyruvate carboxylase family ... 29 4.2
At1g19880.1 68414.m02493 regulator of chromosome condensation (R... 29 4.2
At1g03000.1 68414.m00271 AAA-type ATPase family protein contains... 29 4.2
At1g29880.1 68414.m03652 glycyl-tRNA synthetase / glycine--tRNA ... 28 5.6
At3g52920.2 68416.m05833 expressed protein weak similarity to en... 28 7.3
At3g52920.1 68416.m05832 expressed protein weak similarity to en... 28 7.3
At5g48850.1 68418.m06043 male sterility MS5 family protein simil... 27 9.7
At3g09980.1 68416.m01198 expressed protein contains Pfam profile... 27 9.7
At3g06690.1 68416.m00790 acyl-CoA oxidase family similar to acyl... 27 9.7
At1g20780.1 68414.m02602 armadillo/beta-catenin repeat protein-r... 27 9.7
At1g06070.1 68414.m00636 bZIP transcription factor, putative (bZ... 27 9.7
>At5g54680.1 68418.m06809 basic helix-loop-helix (bHLH) family
protein similar to unknown protein (pir |B71406)
Length = 234
Score = 32.7 bits (71), Expect = 0.26
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +3
Query: 327 LFVDVRRQIVSLRMEMDRVSTSSASVTDALQICHTAAKELRGNTSVLSHKLAELEEQ 497
+ VD R + LR E ++ S++S+ D ++ T ELR L + +LE+Q
Sbjct: 111 ILVDAVRMVTQLRGEAQKLKDSNSSLQDKIKELKTEKNELRDEKQRLKTEKEKLEQQ 167
>At5g42140.1 68418.m05130 zinc finger protein, putative / regulator
of chromosome condensation (RCC1) family protein similar
to zinc finger protein [Arabidopsis thaliana]
gi|15811367|gb|AAL08940
Length = 1073
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 4 AHVCTESESVQIISCGADAFTVASVLVMGSAVHASGP 114
+HV ++S ++ + G+DAF V+ V S+ H S P
Sbjct: 186 SHVASDSPNMLVRGTGSDAFRVSVSSVQSSSSHGSAP 222
>At2g36410.2 68415.m04470 expressed protein contains Pfam profile
PF04949: Family of unknown function (DUF662)
Length = 192
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 437 ERIERQYERAESQTRRIRGTASNTVSRVDAATQDLATLSKKLD 565
ERI+ Q R E +T+R+ S D ++++ + KK+D
Sbjct: 84 ERIQAQLGRVEQETKRLSTIREELESMADPMRKEVSVVRKKID 126
>At2g36410.1 68415.m04469 expressed protein contains Pfam profile
PF04949: Family of unknown function (DUF662)
Length = 195
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 437 ERIERQYERAESQTRRIRGTASNTVSRVDAATQDLATLSKKLD 565
ERI+ Q R E +T+R+ S D ++++ + KK+D
Sbjct: 84 ERIQAQLGRVEQETKRLSTIREELESMADPMRKEVSVVRKKID 126
>At2g26150.1 68415.m03138 heat shock transcription factor family
protein contains Pfam profile: PF00447 HSF-type
DNA-binding domain
Length = 345
Score = 29.9 bits (64), Expect = 1.8
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Frame = +2
Query: 437 ERIERQYERAESQTRRIRGTASNTVSRVDAATQDLATLSKKLDGAPTLADTPMRLAELQR 616
ER++R + ++ R+R ++ S+V A Q L K+ T + +
Sbjct: 164 ERLKRDHGVLVAEVVRLRQQQHSSKSQVAAMEQRLLVTEKRQQQMMTFLAKALNNPNFVQ 223
Query: 617 TVAVFGSEIKSLDGSLQSAKNQALTATTGIEEV-RNLL 727
AV E KSL G L + + LT+T + + NLL
Sbjct: 224 QFAVMSKEKKSLFG-LDVGRKRRLTSTPSLGTMEENLL 260
>At3g14750.1 68416.m01865 expressed protein weak similarity to
Septation ring formation regulator (Swiss-Prot:O34894)
[Bacillus subtilis]
Length = 331
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Frame = +2
Query: 437 ERIERQYERAESQTRRIRGTASNTVSRVDAATQDLATLSKKLDGAPTL-ADTPMRLAELQ 613
+ + + ++ + + S+V TQDLA L+ L PTL A+ ELQ
Sbjct: 145 DAMRAEIQKIRADIKEFTSGRQELTSQVHLMTQDLARLTADLQQIPTLTAEIENTKQELQ 204
Query: 614 RTVAVFGSEIKSLDGSLQSAK 676
R A E K + + K
Sbjct: 205 RARAAIDYEKKGYAENYEHGK 225
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843 DIL
domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +2
Query: 584 DTPMRLAELQRTVAVFGSEIKSLDGSLQSAKNQALTATTGIEEVRNL 724
D + E Q + + + +L+ Q + QAL A+T +EE+ L
Sbjct: 1016 DAKSKAVEFQEIIERLHTNLSNLESENQVLRQQALAASTSVEEIGEL 1062
>At4g27595.1 68417.m03964 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1212
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +2
Query: 521 DAATQDLATLSKKLDGAPTLA-DTPMRLAELQRTVAVFGSEIKSLDGSLQSAKNQALTAT 697
++ QD+ ++KL L+ T L+++++T+A E+K+ + K QA ++
Sbjct: 888 ESELQDVVFENEKLKSKEALSLKTTEELSDVKQTLADKEKELKTAVVENEKLKAQAASSF 947
Query: 698 TGIEEVRNL 724
IEE++NL
Sbjct: 948 QKIEELKNL 956
>At1g68750.1 68414.m07859 phosphoenolpyruvate carboxylase family
protein / PEP carboxylase family protein similar to
SP|P51059 Phosphoenolpyruvate carboxylase 2 (EC
4.1.1.31) (PEPCASE) {Zea mays}; contains Pfam profile
PF00311: phosphoenolpyruvate carboxylase
Length = 1032
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +2
Query: 551 SKKLDGAPTLADTPMRLAELQRTVAVFGSEIKSLDGSLQSAK-NQALTATT 700
S + GA LAD RLA+L R V+ FG + LD ++A+ ++AL A T
Sbjct: 500 SLQSSGARVLADG--RLADLIRRVSTFGMVLVKLDLRQEAARHSEALDAIT 548
>At1g19880.1 68414.m02493 regulator of chromosome condensation
(RCC1) family protein low similarity to UVB-resistance
protein UVR8 [Arabidopsis thaliana] GI:5478530; contains
Pfam profile PF00415: Regulator of chromosome
condensation (RCC1)
Length = 538
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +1
Query: 13 CTESESVQIISCGADAFTVASVLVMGSAVHASGPPRVGK 129
C S+ V ++CGAD FTV G+++ +G P+ G+
Sbjct: 163 CVVSDEVTNVACGAD-FTVWLSSTEGASILTAGLPQYGQ 200
>At1g03000.1 68414.m00271 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 941
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Frame = +2
Query: 221 LGAGVRRDAVDPPIRSPGCRTRFVRLFSVSCNSIMAFRGR-----AKTNRVASNGNGQSI 385
+GA R D +DP + PG RF +L V N+ ++R R + +++ + + S+
Sbjct: 800 IGASNRPDLIDPALLRPG---RFDKLLYVGVNADASYRERVLKALTRKFKLSEDVSLYSV 856
Query: 386 HKQCQRYRRPADM 424
K+C ADM
Sbjct: 857 AKKCPSTFTGADM 869
>At1g29880.1 68414.m03652 glycyl-tRNA synthetase / glycine--tRNA
ligase identical to SP|O23627 Glycyl-tRNA synthetase (EC
6.1.1.14) (Glycine--tRNA ligase) (GlyRS) {Arabidopsis
thaliana}
Length = 729
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 167 PTKASNSRLFLIFFPTLGGPEACTALPI 84
P+KA + +L L FP L P CT P+
Sbjct: 596 PSKAGDEQLNLFRFPPLVAPIKCTVFPL 623
>At3g52920.2 68416.m05833 expressed protein weak similarity to
enterophilin-2L [Cavia porcellus] GI:12718845; contains
Pfam profile PF04949: Family of unknown function
(DUF662)
Length = 177
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 437 ERIERQYERAESQTRRIRGTASNTVSRVDAATQDLATLSKKLD 565
ER++ Q R E +TRR+ + D +++ + KK+D
Sbjct: 55 ERVKAQLGRVEEETRRLASIREELETMADPMRKEVNWVRKKID 97
>At3g52920.1 68416.m05832 expressed protein weak similarity to
enterophilin-2L [Cavia porcellus] GI:12718845; contains
Pfam profile PF04949: Family of unknown function
(DUF662)
Length = 180
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 437 ERIERQYERAESQTRRIRGTASNTVSRVDAATQDLATLSKKLD 565
ER++ Q R E +TRR+ + D +++ + KK+D
Sbjct: 55 ERVKAQLGRVEEETRRLASIREELETMADPMRKEVNWVRKKID 97
>At5g48850.1 68418.m06043 male sterility MS5 family protein similar
to male sterility MS5 [Arabidopsis thaliana] GI:3859112;
contains Pfam profile PF00515 TPR Domain
Length = 306
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +2
Query: 497 ASNTVSRVDAATQDLATLSKKLD 565
A NT RVD+A +D+A + K+LD
Sbjct: 63 AINTGDRVDSALKDMAVVMKQLD 85
>At3g09980.1 68416.m01198 expressed protein contains Pfam profile
PF04949: Family of unknown function (DUF662)
Length = 178
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 437 ERIERQYERAESQTRRIRGTASNTVSRVDAATQDLATLSKKLD 565
ER++ Q R E +T+R+ D +++A + KK+D
Sbjct: 69 ERVQAQLGRVEEETKRLALIREELEGLADPMRKEVAMVRKKID 111
>At3g06690.1 68416.m00790 acyl-CoA oxidase family similar to
acyl-CoA oxidase [Arabidopsis thaliana] GI:8515709,
acyl-CoA oxidase ACX3 [Arabidopsis thaliana] GI:8163758;
contains Pfam profile PF01756: Acyl-CoA oxidase
Length = 98
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 594 IGVSASVGAPSSFLESVARSWVAAST 517
+ + S G P SFL +A +WV A+T
Sbjct: 69 LALVTSFGIPDSFLSPIAFNWVEANT 94
>At1g20780.1 68414.m02602 armadillo/beta-catenin repeat
protein-related / U-box domain-containing protein low
similarity to immediate-early fungal elicitor protein
CMPG1 [Petroselinum crispum] GI:14582200; contains Pfam
profile PF04564: U-box domain
Length = 801
Score = 27.5 bits (58), Expect = 9.7
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +2
Query: 389 KQCQRYRRPADMPHGSERIERQYERAESQTRRIRGTASNTVSRVDAATQDLATLSKKLDG 568
K+C+ RP P S+ + S + +R T SR DAA D+A S L
Sbjct: 58 KECRDSGRPPSCPLTSQELT---STDVSASIALRNTIEEWRSRNDAAKLDIARQSLFLGN 114
Query: 569 APT-LADTPMRLAELQRTV 622
A T + M + ++ RT+
Sbjct: 115 AETDILQALMHVRQICRTI 133
>At1g06070.1 68414.m00636 bZIP transcription factor, putative
(bZIP69) similar to transcriptional activator RF2a
GB:AF005492 GI:2253277 from [Oryza sativa]; contains
Pfam profile PF00170: bZIP transcription factor
Length = 423
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = -2
Query: 227 PQGSPSSLEADNSLPPRDPTPTKASNSRLF 138
P GS +++A++S PP P+ + +S++ F
Sbjct: 27 PNGSSFAMKAESSFPPLTPSGSNSSDANRF 56
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,884,061
Number of Sequences: 28952
Number of extensions: 342987
Number of successful extensions: 1224
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1224
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1604469728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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