Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0751
(807 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 91 7e-19
SB_4934| Best HMM Match : NAD_binding_2 (HMM E-Value=4.8) 91 1e-18
SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 78 7e-15
SB_25097| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 4e-13
SB_25096| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 8e-12
SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 4e-11
SB_57454| Best HMM Match : DUF924 (HMM E-Value=1) 56 3e-08
SB_22388| Best HMM Match : Extensin_2 (HMM E-Value=0.086) 55 6e-08
SB_56096| Best HMM Match : fn3 (HMM E-Value=1.3e-24) 34 0.16
SB_49248| Best HMM Match : Cpn60_TCP1 (HMM E-Value=1.6) 31 0.83
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 31 1.1
SB_56262| Best HMM Match : Cpn60_TCP1 (HMM E-Value=6.6e-15) 31 1.5
SB_36073| Best HMM Match : 7tm_1 (HMM E-Value=6.7e-27) 29 5.9
SB_36071| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-27) 29 5.9
SB_5376| Best HMM Match : EGF_CA (HMM E-Value=0) 29 5.9
SB_9614| Best HMM Match : GBP (HMM E-Value=1e-31) 28 7.7
>SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 505
Score = 91.5 bits (217), Expect = 7e-19
Identities = 47/88 (53%), Positives = 66/88 (75%), Gaps = 2/88 (2%)
Frame = +1
Query: 256 ATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVIS 435
ATIL M V H AK++VELS++QD E GDGTT VVV+AGALL+ AE+LL GIHP I+
Sbjct: 73 ATILGMMEVDHQIAKLMVELSKSQDNEIGDGTTGVVVLAGALLEHAEQLLDWGIHPIRIA 132
Query: 436 DGFQKALQLALQVVENMST--PVDLNMK 513
DG++ A ++AL+ +++++ PVD + K
Sbjct: 133 DGYELAAKIALEHMDSIADNFPVDKDNK 160
Score = 54.8 bits (126), Expect = 8e-08
Identities = 24/38 (63%), Positives = 33/38 (86%)
Frame = +2
Query: 140 SNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITND 253
S+I AA+AVA ++TSLGP+GMDKM+ + +GEVT+TND
Sbjct: 34 SHILAARAVASILKTSLGPKGMDKMMVSPDGEVTVTND 71
Score = 45.2 bits (102), Expect = 6e-05
Identities = 29/98 (29%), Positives = 53/98 (54%)
Frame = +3
Query: 510 EDALLKAAATSLNSKVVSQHSTILAPIAVQAIRAVMEPIVSGVGARVDLRDVKVIERIGG 689
+++L++ A T+L SK+VS+ LA IAV A+ +V + VD +KV + GG
Sbjct: 160 KESLIQTAMTTLGSKIVSRCHRPLAEIAVDAVLSVADL----ERKDVDFELIKVEGKEGG 215
Query: 690 TVEDAELIQGLVIPHRAANVNGPHPLKRLKLVLYNFAF 803
++D L++G+V+ ++ P +K K+ + F
Sbjct: 216 KLDDTVLVKGVVVDKDMSHPQMPKVVKDAKIAILTCPF 253
>SB_4934| Best HMM Match : NAD_binding_2 (HMM E-Value=4.8)
Length = 186
Score = 90.6 bits (215), Expect = 1e-18
Identities = 41/64 (64%), Positives = 52/64 (81%)
Frame = +2
Query: 62 PKAGGDAIKANSSVYKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVT 241
P+A +++ + +KDK KP +IR++NI AAKAVADAIRTSLGP+GMDKMIQ NG+VT
Sbjct: 2 PEAKAGRNQSHKTAFKDKEKPQEIRMTNITAAKAVADAIRTSLGPKGMDKMIQGGNGDVT 61
Query: 242 ITND 253
ITND
Sbjct: 62 ITND 65
>SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 531
Score = 78.2 bits (184), Expect = 7e-15
Identities = 39/75 (52%), Positives = 53/75 (70%)
Frame = +1
Query: 256 ATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVIS 435
ATILK + + +PAAK+LVELS+ QD E GDGTTSV V+ LL AEKL+ IHP I
Sbjct: 65 ATILKSIGIDNPAAKILVELSKVQDDEVGDGTTSVTVLTSELLKEAEKLVSCKIHPQTIV 124
Query: 436 DGFQKALQLALQVVE 480
G++K+++ A + +E
Sbjct: 125 AGWRKSVKAAEKALE 139
Score = 45.2 bits (102), Expect = 6e-05
Identities = 19/50 (38%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Frame = +2
Query: 110 DKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQA--ANGEVTITND 253
++ + RLS+ A A+ D ++++LGP+GMDK++Q+ NG + +TND
Sbjct: 14 EEERAETARLSSFVGAIAIGDLVKSTLGPKGMDKILQSFGQNGNIQVTND 63
Score = 45.2 bits (102), Expect = 6e-05
Identities = 27/97 (27%), Positives = 55/97 (56%)
Frame = +3
Query: 504 EYEDALLKAAATSLNSKVVSQHSTILAPIAVQAIRAVMEPIVSGVGARVDLRDVKVIERI 683
++ + L+ A T+L+SK++ QH A +AV A+ + G G DL +++I+++
Sbjct: 151 KFREDLMNIARTTLSSKILVQHRDHFAKLAVDAVLR-----LKGSG---DLNAIQIIKKL 202
Query: 684 GGTVEDAELIQGLVIPHRAANVNGPHPLKRLKLVLYN 794
GG + D+ L +G ++ + VN P ++ K+++ N
Sbjct: 203 GGGMVDSFLDEGFLL-DKKIGVNQPKKIENAKILIAN 238
>SB_25097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 72.5 bits (170), Expect = 4e-13
Identities = 31/73 (42%), Positives = 51/73 (69%)
Frame = +1
Query: 262 ILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDG 441
IL+++ V HPAAK ++E+SR QD E GDGTTSV+++AG + AE L++ +HPT I
Sbjct: 8 ILREIQVKHPAAKSMIEISRTQDEEVGDGTTSVIILAGEFMSVAEPFLEQQMHPTQIIAA 67
Query: 442 FQKALQLALQVVE 480
++ A+ + +++
Sbjct: 68 YRLAMDDMIDILK 80
>SB_25096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 68.1 bits (159), Expect = 8e-12
Identities = 29/70 (41%), Positives = 48/70 (68%)
Frame = +1
Query: 271 QMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQK 450
++ V HPAAK ++E+SR QD E GDGTTSV+++AG + AE L++ +HPT I ++
Sbjct: 208 KIQVKHPAAKSMIEISRTQDEEVGDGTTSVIILAGEFMSVAEPFLEQQMHPTQIIAAYRL 267
Query: 451 ALQLALQVVE 480
A+ + +++
Sbjct: 268 AMDDMIDILK 277
>SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 762
Score = 65.7 bits (153), Expect = 4e-11
Identities = 29/85 (34%), Positives = 53/85 (62%)
Frame = +1
Query: 265 LKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGF 444
++ + HP A ++ ++ AQD GDGTTS V+I G LL A+ + +G+HP ++++GF
Sbjct: 166 VQNSQIQHPTASLIARVATAQDDITGDGTTSNVMIIGELLKQADLYVSEGLHPRLVTEGF 225
Query: 445 QKALQLALQVVENMSTPVDLNMKML 519
+ A + AL+V+E + +++ L
Sbjct: 226 EVAKKKALEVLEEVKVSREMDRDTL 250
>SB_57454| Best HMM Match : DUF924 (HMM E-Value=1)
Length = 144
Score = 56.4 bits (130), Expect = 3e-08
Identities = 28/56 (50%), Positives = 38/56 (67%)
Frame = +1
Query: 313 LSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVVE 480
LS+ QD E GDGTTSV V+A LL AEKL+ IHP I G++K+++ A + +E
Sbjct: 2 LSKVQDDEVGDGTTSVTVLASELLKEAEKLVSCKIHPQTIVAGWRKSVKAAEKALE 57
Score = 38.7 bits (86), Expect = 0.005
Identities = 23/72 (31%), Positives = 42/72 (58%)
Frame = +3
Query: 504 EYEDALLKAAATSLNSKVVSQHSTILAPIAVQAIRAVMEPIVSGVGARVDLRDVKVIERI 683
++ D L+ A T+L+SK++ QH A +AV A+ + G G DL +++I+++
Sbjct: 69 KFRDDLMNIARTTLSSKILVQHRDHFAKLAVDAVLR-----LKGSG---DLNAIQIIKKL 120
Query: 684 GGTVEDAELIQG 719
GG + D+ L +G
Sbjct: 121 GGGMVDSFLDEG 132
>SB_22388| Best HMM Match : Extensin_2 (HMM E-Value=0.086)
Length = 724
Score = 55.2 bits (127), Expect = 6e-08
Identities = 25/48 (52%), Positives = 35/48 (72%)
Frame = +2
Query: 110 DKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITND 253
D S+ +SNI+A + +ADA+RT+LGPRGMDK+I G+ TI+ND
Sbjct: 649 DASQGIPQLISNIDACQFIADAVRTTLGPRGMDKLIVDGRGKATISND 696
Score = 35.9 bits (79), Expect = 0.039
Identities = 13/27 (48%), Positives = 22/27 (81%)
Frame = +1
Query: 256 ATILKQMSVIHPAAKMLVELSRAQDIE 336
ATI+ + ++HPAAK LV+++++QD E
Sbjct: 698 ATIINLLDIVHPAAKTLVDIAKSQDAE 724
>SB_56096| Best HMM Match : fn3 (HMM E-Value=1.3e-24)
Length = 1065
Score = 33.9 bits (74), Expect = 0.16
Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 6/121 (4%)
Frame = +1
Query: 184 KLRASWNG*DDSSSQWRSYNN***ATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVV 363
+LR+ W G + + QW S + ++K SV+ P + L + IE T
Sbjct: 923 RLRSLWTGNERIAVQWDSVEDEVDRYVVKWSSVLSPQEETLPATKTSMVIEECIAGTR-H 981
Query: 364 VIAGALLDSAEKLLQKGIHPTVISDG------FQKALQLALQVVENMSTPVDLNMKMLCS 525
IA A +DS KL+ K V + +K L L+++ N T + N LC
Sbjct: 982 FIAVAAIDSHRKLIAKSTQLIVQTSAPLQKPVLRKRLCRKLELLNNSVTGCESNPSFLCI 1041
Query: 526 R 528
R
Sbjct: 1042 R 1042
>SB_49248| Best HMM Match : Cpn60_TCP1 (HMM E-Value=1.6)
Length = 278
Score = 31.5 bits (68), Expect = 0.83
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = +1
Query: 295 AKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVIS 435
A+++ +++ + EAGDGTT+ V+A ++ + KG +P +S
Sbjct: 127 ARLVQDVANNTNEEAGDGTTTATVLARSIATEGFLHVSKGANPQEVS 173
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +2
Query: 128 DIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITND 253
+ R + + +ADA+ +LGP+G + +I+ + G IT D
Sbjct: 67 EARAAMLQGVDTLADAVAVTLGPKGKNVIIEQSFGGPKITKD 108
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/65 (33%), Positives = 33/65 (50%)
Frame = +1
Query: 292 AAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQ 471
A++ML E+SR GD + ++G L EKLL+ +HP I G K L +Q
Sbjct: 238 ASQMLYEVSRL----LGDKSIVASFVSGVDLSRQEKLLKDSLHPPRIVIGTPKRLWEIVQ 293
Query: 472 VVENM 486
E++
Sbjct: 294 EHEHL 298
>SB_56262| Best HMM Match : Cpn60_TCP1 (HMM E-Value=6.6e-15)
Length = 563
Score = 30.7 bits (66), Expect = 1.5
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +2
Query: 176 IRTSLGPRGMDKMIQAANGEVTITN 250
++ S GP G+D M+++++G + ITN
Sbjct: 16 LKKSFGPNGLDVMLRSSSGNILITN 40
>SB_36073| Best HMM Match : 7tm_1 (HMM E-Value=6.7e-27)
Length = 305
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -3
Query: 280 HSFVSKLLLIISYCNFSIGCLNHLIHSTRP*ACADGISNSFCGIYVA 140
H FV+ L+++ S CN S + + +P A I+ SF + A
Sbjct: 68 HGFVTMLVIVSSTCNLSAVAFDRYLAVVKPLAYKTKIAGSFARLVCA 114
>SB_36071| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-27)
Length = 310
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -3
Query: 280 HSFVSKLLLIISYCNFSIGCLNHLIHSTRP*ACADGISNSFCGIYVA 140
H FV+ L+++ S CN S + + +P A I+ SF + A
Sbjct: 74 HGFVTMLVIVSSTCNLSAVAFDRYLAVVKPLAYKTKIAGSFARLVCA 120
>SB_5376| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1705
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -2
Query: 683 YTLNDFHISEVNSCTNT--TNNRFHYCSNCLHCNGCQNS 573
YT N + +++N C + ++N HY NC C N+
Sbjct: 174 YTGNGTNCTDINECNSLALSSNHSHYAHNCQSDANCTNT 212
>SB_9614| Best HMM Match : GBP (HMM E-Value=1e-31)
Length = 708
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -1
Query: 291 WMNNTHLFQNCCSSLVIVTSPLAA*IILSIPRGPKLVRMASATAFAAF 148
W N HL + C LV+ +L+ RGP+ ++ A AAF
Sbjct: 453 WRRNKHLTEKLCQHLVVELKESKLDPVLARLRGPQGHQLKFAEIIAAF 500
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,794,294
Number of Sequences: 59808
Number of extensions: 473820
Number of successful extensions: 1354
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1352
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2239700683
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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