Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0750
(642 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 55 6e-10
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 27 0.13
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 25 0.40
AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory recept... 25 0.70
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 23 2.1
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 23 2.1
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 4.9
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 4.9
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 4.9
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 4.9
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 21 8.6
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 54.8 bits (126), Expect = 6e-10
Identities = 24/64 (37%), Positives = 41/64 (64%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 475
+ +F+ L+ LL + G+ KP+AIQ+ AI + GRD+++ AQ+G+GKTA F + I
Sbjct: 157 ITSFETSGLRPHLLENVKKSGYTKPTAIQKYAIPVILSGRDLMSCAQTGSGKTAAFMLPI 216
Query: 476 LQQI 487
+ +
Sbjct: 217 IHNL 220
Score = 23.0 bits (47), Expect = 2.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 514 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 621
+I++PTRELA QI + K GGT+
Sbjct: 239 VIMSPTRELAIQIADQGKKFAYNSTVKVAVIYGGTS 274
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 27.1 bits (57), Expect = 0.13
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +3
Query: 126 ASSFPFSYCG*NMSYSSERRSEDWPEDSKNGPSKDQGSYDGPP 254
+SS PFS G +S S +R++DW S +G GPP
Sbjct: 83 SSSGPFSSIGGGISASKRQRTDDW-LSSPSGNVPPLTPSPGPP 124
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 25.4 bits (53), Expect = 0.40
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +3
Query: 147 YCG*NMSYSSERRSEDWPEDSK 212
YC + ++ ER+ DWP+ +K
Sbjct: 1130 YCAGGLHWNKERKICDWPKSAK 1151
>AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory receptor
candidate 9 protein.
Length = 408
Score = 24.6 bits (51), Expect = 0.70
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +1
Query: 451 NCYFLYIDSTTNRYKHS*M*ALILAPTRELAQQIQKVVIALGDHLNAKCHAC 606
N F+ + ST Y+ + I A E +K IAL D N CH C
Sbjct: 228 NDLFVMLISTALAYRFGQITRRIAAVASEKVTS-EKSWIALNDDYNRLCHLC 278
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 23.0 bits (47), Expect = 2.1
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +3
Query: 519 PGSHKRAGPTNSEGGDSSW 575
PG+ K+ GP + +SW
Sbjct: 28 PGAKKKVGPIDQSAAAASW 46
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 23.0 bits (47), Expect = 2.1
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +3
Query: 519 PGSHKRAGPTNSEGGDSSW 575
PG+ K+ GP + +SW
Sbjct: 28 PGAKKKVGPIDQSAAAASW 46
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 4.9
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +3
Query: 522 GSHKRAGPTNSEGGDSS 572
G H G EGGD S
Sbjct: 1173 GDHHHLGAVTEEGGDES 1189
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 4.9
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +3
Query: 522 GSHKRAGPTNSEGGDSS 572
G H G EGGD S
Sbjct: 1173 GDHHHLGAVTEEGGDES 1189
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 21.8 bits (44), Expect = 4.9
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +3
Query: 522 GSHKRAGPTNSEGGDSS 572
G H G EGGD S
Sbjct: 1173 GDHHHLGAVTEEGGDES 1189
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 21.8 bits (44), Expect = 4.9
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +3
Query: 522 GSHKRAGPTNSEGGDSS 572
G H G EGGD S
Sbjct: 1173 GDHHHLGAVTEEGGDES 1189
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 21.0 bits (42), Expect = 8.6
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = -1
Query: 642 LANIFTDIGATNASMAFSIQVITKSYHHLLNLLGQLSCGSQ 520
+AN TD + S+A S +++ H L + + G+Q
Sbjct: 208 MANYSTDYSSLTHSLAASNHLLSSGQHLLQDTYKSMLPGAQ 248
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,913
Number of Sequences: 336
Number of extensions: 3322
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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