Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0736
(793 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 4e-08
SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16) 48 1e-05
SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_41623| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17) 40 0.003
SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14) 38 0.007
SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18) 38 0.007
SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15) 34 0.11
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.15
SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11) 33 0.27
SB_25563| Best HMM Match : HEAT (HMM E-Value=2.5e-20) 32 0.46
SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29) 32 0.61
SB_27119| Best HMM Match : CBM_14 (HMM E-Value=4.1e-15) 32 0.61
SB_52309| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 30 1.9
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_26480| Best HMM Match : EGF (HMM E-Value=0) 29 4.3
SB_8869| Best HMM Match : Keratin_B2 (HMM E-Value=0.35) 29 4.3
SB_43576| Best HMM Match : EGF_CA (HMM E-Value=2.7e-38) 28 7.5
SB_25369| Best HMM Match : HEAT (HMM E-Value=3.9e-05) 28 7.5
SB_38887| Best HMM Match : EGF_CA (HMM E-Value=6.2e-31) 28 7.5
SB_16860| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_48964| Best HMM Match : TRAP_240kDa (HMM E-Value=0) 28 10.0
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 28 10.0
>SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1601
Score = 55.6 bits (128), Expect = 4e-08
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +1
Query: 247 AGIPCGYPVEVTCVGRGSIQPAQTTPDCPHQYGIFKHPN--ASPTNCGQYRTCVGGRAFD 420
+G+ G P + C G+G+I P + TP ++ K A P +C Y C GR+F
Sbjct: 196 SGLTVGDPNSIRCFGQGNIPPGKATPAEDEKFCAGKTDGTYADPKDCSAYYQCKKGRSFK 255
Query: 421 MVCPPGLAFNPDFSRCD 471
CP GL FN CD
Sbjct: 256 KFCPDGLKFNALIKSCD 272
Score = 34.7 bits (76), Expect = 0.087
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 134 NGYYKTDANCDTYIECRDYQATNMICPDGLHFNPSVE 244
+G Y +C Y +C+ ++ CPDGL FN ++
Sbjct: 233 DGTYADPKDCSAYYQCKKGRSFKKFCPDGLKFNALIK 269
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/48 (22%), Positives = 22/48 (45%)
Frame = +3
Query: 591 NCYYFFSCEQNRARLLSCDIGLAFDPTTGRCVDADRVQCNATQNTNDK 734
+C ++ C++ R+ C GL F+ C + +V C Q ++
Sbjct: 241 DCSAYYQCKKGRSFKKFCPDGLKFNALIKSCDEPSKVNCVTKQRDEEE 288
>SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16)
Length = 518
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +1
Query: 307 PAQTTPDCPHQYGIFKHPN-----ASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCD 471
P + TP ++ G+F N A NC + C GG A CPPGL FN D CD
Sbjct: 443 PTEGTPKYSNKDGMFCERNGDGIYAEKENCYGFVLCGGGIAHKKTCPPGLIFNTDLMVCD 502
Query: 472 WA 477
W+
Sbjct: 503 WS 504
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +2
Query: 83 QSTPAAATAQNVICKAR-NGYYKTDANCDTYIECRDYQATNMICPDGLHFN 232
+ TP + + C+ +G Y NC ++ C A CP GL FN
Sbjct: 445 EGTPKYSNKDGMFCERNGDGIYAEKENCYGFVLCGGGIAHKKTCPPGLIFN 495
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +3
Query: 576 YKYEGNCYYFFSCEQNRARLLSCDIGLAFDPTTGRCVDADRVQCN 710
Y + NCY F C A +C GL F+ C + V+CN
Sbjct: 466 YAEKENCYGFVLCGGGIAHKKTCPPGLIFNTDLMVCDWSHEVKCN 510
>SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1671
Score = 42.3 bits (95), Expect = 4e-04
Identities = 26/78 (33%), Positives = 32/78 (41%), Gaps = 5/78 (6%)
Frame = +1
Query: 253 IPCGYPVEVTCVGRGSIQPAQTTPDCPHQYGIFKHPNAS-----PTNCGQYRTCVGGRAF 417
+ C +P +V C R + P T P P F N + P NC Y C GG +
Sbjct: 638 LECEWPNKVNCKSRPTTVPYVTKPTPPSGNSEFCKKNGNGRYRDPHNCLGYIVCRGGNIY 697
Query: 418 DMVCPPGLAFNPDFSRCD 471
C GL FN RCD
Sbjct: 698 FRNCRRGLRFNGVTKRCD 715
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 364 ASPTNCGQYRTCVGGRAF-DMVCPPGLAFNPDFSRCDWADLVPSC 495
A +NC Y TC G + CP GLAFN CD+ VP C
Sbjct: 325 ADSSNCNLYITCSNGFTIANRHCPTGLAFNEAIGMCDYPSNVPGC 369
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 364 ASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLV 486
A NC + C G + M CP L ++P RC+WAD V
Sbjct: 527 ADANNCNGFVMCSNGYIYYMDCPSNLRYDPAKGRCEWADTV 567
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/73 (28%), Positives = 32/73 (43%)
Frame = +1
Query: 298 SIQPAQTTPDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWA 477
++ P T P P A P+NC + TC G A+ CP L F+ C+W
Sbjct: 584 TMPPQPTPPKSPFCEEKKNGDYADPSNCNGFITCSNGYAYKRDCPFNLKFDTKKLECEWP 643
Query: 478 DLVPSCDAEKSWV 516
+ V +C + + V
Sbjct: 644 NKV-NCKSRPTTV 655
Score = 37.9 bits (84), Expect = 0.009
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +3
Query: 573 NYKYEGNCYYFFSCEQNRARLLSCDIGLAFDPTTGRCVDAD 695
NYK GNC+ F C ++C FDP RC D D
Sbjct: 385 NYKDSGNCHGFIMCSNGHTYHMTCPGQTNFDPAKKRCEDYD 425
Score = 36.7 bits (81), Expect = 0.022
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +3
Query: 573 NYKYEGNCYYFFSCEQNRARLLSCDIGLAFDPTTGRCVDADRVQCNATQNTNDK 734
+Y+ C F SC + + C L F+PTT C + + VQC T+ K
Sbjct: 450 DYQDPDACEGFISCSNHITYHMPCPENLRFNPTTKHCDNPENVQCGPTRPPTPK 503
Score = 36.7 bits (81), Expect = 0.022
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = +3
Query: 576 YKYEGNCYYFFSCEQNRARLLSCDIGLAFDPTTGRCVDADRVQC 707
Y NC F C + C L +DP GRC AD V C
Sbjct: 526 YADANNCNGFVMCSNGYIYYMDCPSNLRYDPAKGRCEWADTVDC 569
Score = 35.9 bits (79), Expect = 0.038
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 113 NVICKARNGYYKTDANCDTYIECRD-YQATNMICPDGLHFNPSV 241
N + ++G Y +NC+ YI C + + N CP GL FN ++
Sbjct: 314 NFCTERQDGNYADSSNCNLYITCSNGFTIANRHCPTGLAFNEAI 357
Score = 35.5 bits (78), Expect = 0.050
Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = +2
Query: 71 CKHVQSTPAAATAQNVICKAR-NGYYKTDANCDTYIECRDYQATNMICPDGLHFNPSVEW 247
C ++ A C+ R +G Y NC+ +I+C + CP L FN +W
Sbjct: 714 CDLPRNVKCAGAGGGTFCEGRKDGDYVDAVNCNGFIKCSNQLTYYFDCPSNLRFNIKKDW 773
Query: 248 PAF 256
+
Sbjct: 774 AEY 776
Score = 34.3 bits (75), Expect = 0.11
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 122 CKARN-GYYKTDANCDTYIECRDYQATNMICPDGLHFNPSVE 244
C R+ G Y+ C+ +I C ++ +M CP+ L FNP+ +
Sbjct: 443 CAERSDGDYQDPDACEGFISCSNHITYHMPCPENLRFNPTTK 484
Score = 33.1 bits (72), Expect = 0.27
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +2
Query: 71 CKHVQSTPAAA-TAQNVICKARN-GYYKTDANCDTYIECRDYQATNMICPDGLHFNPS 238
C + + P + ++ + C ++ G YK NC +I C + +M CP +F+P+
Sbjct: 360 CDYPSNVPGCSGSSGSGFCHEKSDGNYKDSGNCHGFIMCSNGHTYHMTCPGQTNFDPA 417
Score = 31.9 bits (69), Expect = 0.61
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Frame = +2
Query: 92 PAAATAQNVICKAR-NGYYKTDANCDTYIECRDYQATNMICPDGLHFNP---SVEWP 250
P ++ C+ + NG Y +NC+ +I C + A CP L F+ EWP
Sbjct: 587 PQPTPPKSPFCEEKKNGDYADPSNCNGFITCSNGYAYKRDCPFNLKFDTKKLECEWP 643
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +2
Query: 80 VQSTPAAATAQNVICKAR-NGYYKTDANCDTYIECRDYQATNMICPDGLHFNPS 238
V T A ++ C + NG Y NC+ ++ C + M CP L ++P+
Sbjct: 504 VPPTTKAPFTKSPFCVGKQNGKYADANNCNGFVMCSNGYIYYMDCPSNLRYDPA 557
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = +2
Query: 92 PAAATAQNVICKAR-NGYYKTDANCDTYIECRDYQATNMICPDGLHFN 232
P + + CK NG Y+ NC YI CR C GL FN
Sbjct: 661 PTPPSGNSEFCKKNGNGRYRDPHNCLGYIVCRGGNIYFRNCRRGLRFN 708
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +1
Query: 370 PTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCD 471
P C + +C + M CP L FNP CD
Sbjct: 454 PDACEGFISCSNHITYHMPCPENLRFNPTTKHCD 487
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +1
Query: 376 NCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCD 471
NC + C G + M CP F+P RC+
Sbjct: 391 NCHGFIMCSNGHTYHMTCPGQTNFDPAKKRCE 422
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/51 (27%), Positives = 19/51 (37%)
Frame = +3
Query: 573 NYKYEGNCYYFFSCEQNRARLLSCDIGLAFDPTTGRCVDADRVQCNATQNT 725
+Y NC F +C A C L FD C ++V C + T
Sbjct: 604 DYADPSNCNGFITCSNGYAYKRDCPFNLKFDTKKLECEWPNKVNCKSRPTT 654
>SB_41623| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1604
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +2
Query: 5 LVSIRYSKKKDALLHLPRLASGCKHVQSTPAAATAQNVICKARNGYYKTDANCDTYIECR 184
L+ IR ++K DA ++ R+ SG + S A A C+ +G + +N + YIEC+
Sbjct: 381 LLMIRDARKDDAGIYTCRVTSGLQPGYSHSANAKLVIEECRKPSGKFPDPSNINGYIECK 440
Query: 185 DYQATNMICPD-GLHFNPSVE 244
+ + CPD H+N +++
Sbjct: 441 NNIPKRVDCPDVHQHWNDTLK 461
>SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17)
Length = 225
Score = 39.5 bits (88), Expect = 0.003
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 370 PTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDW 474
P C Y C G A++M CP GL +N + CDW
Sbjct: 97 PDFCKMYIACSNGIAYEMPCPAGLNWNDEKKYCDW 131
Score = 33.5 bits (73), Expect = 0.20
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = +2
Query: 113 NVICKAR-NGYYKTDANCDTYIECRDYQATNMICPDGLHFNPS---VEWP 250
+ ICK R +G Y C YI C + A M CP GL++N +WP
Sbjct: 83 STICKNRADGNYPHPDFCKMYIACSNGIAYEMPCPAGLNWNDEKKYCDWP 132
>SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14)
Length = 480
Score = 38.3 bits (85), Expect = 0.007
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +2
Query: 29 KKDALLHLPRLASGCKHVQSTPAAATAQNVICKARNGYYKTDANCDTYIECRDYQATNMI 208
K A +H+P + H + + + N +G Y + CD YI C + A M
Sbjct: 308 KSPATIHIP--VTTRNHPRQFTVSTSVSNFCQDKADGNYAHPSKCDMYITCSNGIAHEMP 365
Query: 209 CPDGLHFN 232
CP GL++N
Sbjct: 366 CPAGLNWN 373
Score = 38.3 bits (85), Expect = 0.007
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +1
Query: 364 ASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCD 471
A P+ C Y TC G A +M CP GL +N CD
Sbjct: 345 AHPSKCDMYITCSNGIAHEMPCPAGLNWNDVTKECD 380
>SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18)
Length = 123
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 113 NVICKAR-NGYYKTDANCDTYIECRDYQATNMICPDGLHFNPSVEW 247
N CK R NG Y NC YI C + CP GL++N + +W
Sbjct: 59 NSFCKKRANGDYAHPENCKMYITCSNKITYERQCPAGLNWNDAKKW 104
Score = 37.9 bits (84), Expect = 0.009
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +1
Query: 364 ASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVP 489
A P NC Y TC ++ CP GL +N CDW P
Sbjct: 71 AHPENCKMYITCSNKITYERQCPAGLNWNDAKKWCDWPKNAP 112
>SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15)
Length = 134
Score = 34.3 bits (75), Expect = 0.11
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 373 TNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDW 474
T+C Y C G+A C PG ++P + C+W
Sbjct: 35 TSCQHYYHCTWGKAVRKDCGPGRVWDPRITNCNW 68
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 33.9 bits (74), Expect = 0.15
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Frame = +1
Query: 328 CPHQYGIFKHPN---ASPTNCGQYRTCVG-GRAFDMVCPPGLAFNPDFSRCDWADLVPSC 495
C Y + PN A P +C ++ C RAF CP GL ++ + CDW V C
Sbjct: 1232 CVDTYFCKEKPNGHYADPRDCSRFYQCDAFHRAFLHRCPAGLKWSVKKTACDWPRYV-DC 1290
Query: 496 DAEKS 510
D S
Sbjct: 1291 DRTTS 1295
Score = 32.7 bits (71), Expect = 0.35
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +1
Query: 364 ASPTNCGQYRTCVG-GRAFDMVCPPGLAFNPDFSRCDWADLVPSCDAEKS 510
A P +C ++ C RAF CP GL ++ + CDW V CD S
Sbjct: 897 ADPRDCSKFYQCDAFHRAFLHRCPAGLKWSVKKTACDWPRYV-DCDRTTS 945
Score = 32.3 bits (70), Expect = 0.46
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 364 ASPTNCGQYRTCVG-GRAFDMVCPPGLAFNPDFSRCDWADLVPSCD 498
A P +C ++ C RAF CP GL ++ + CDW V CD
Sbjct: 1002 ADPMDCSRFYQCDAFHRAFLHRCPAGLKWSVKKTTCDWPRYV-DCD 1046
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Frame = +1
Query: 355 HPNASPTNCGQYRTCVGGRAFDMV----CPPGLAFNPDFSRCDWADLVPSCDAE 504
H A P +C +Y C G +D V CP G +N +CD ADLV CD +
Sbjct: 73 HDFADPRDCFKYYHCDG---YDDVRWRSCPTGQLWNHVNKKCDRADLV-ICDRD 122
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 364 ASPTNCGQYRTCVG-GRAFDMVCPPGLAFNPDFSRCDWADLVPSCD 498
A P +C ++ C RAF C PGL ++ + CDW V CD
Sbjct: 792 ADPRDCSRFYQCDAFHRAFLHRCSPGLKWSITKTTCDWPRNV-DCD 836
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +1
Query: 364 ASPTNCGQYRTCVG-GRAFDMVCPPGLAFNPDFSRCDWADLVPSCDAEKS 510
A P +C ++ C + F CP GL ++ + CDW V CD S
Sbjct: 1147 ADPRDCSRFYQCDAFHKTFLHRCPAGLKWSVKKTACDWPRYV-DCDRTTS 1195
Score = 29.9 bits (64), Expect = 2.5
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 370 PTNCGQYRTC-VGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCDAEKSWVSLAPLLLW 540
P NC + C + RAF CP GL +N + + CD V +C+ E+ V L +LW
Sbjct: 1465 PRNCSRLYQCDIFHRAFLKSCPHGLKWNIEKNACDHPVNV-NCNREEYDV-LTLGILW 1520
>SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11)
Length = 3810
Score = 33.1 bits (72), Expect = 0.27
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = +1
Query: 289 GRGSIQPAQTTPDCPHQYGIFKHPNASPTN---CGQYRTCVGGRAFDMVCPPGLAFNPDF 459
G+ P Q PD P G + P +S + C C+GG + +CP G + P+
Sbjct: 1179 GQHCSTPGQNKPDGPCDPGYYCPPRSSSSKEIECPSGTYCIGGNSEPELCPIG-TYQPNT 1237
Query: 460 SRCDWADLVPSC 495
R AD SC
Sbjct: 1238 GRTALADCT-SC 1248
>SB_25563| Best HMM Match : HEAT (HMM E-Value=2.5e-20)
Length = 1803
Score = 32.3 bits (70), Expect = 0.46
Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +1
Query: 355 HPNASPTNCGQYRTCVG---GRAFDMVCPPGLAFNPDFSRCDWADLVPSCD 498
H A P +C +Y C G GR CP G +N +CD ADLV CD
Sbjct: 1497 HDFADPKDCSKYYHCDGYDDGRLRS--CPTGQLWNHVNKKCDRADLV-ICD 1544
>SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29)
Length = 339
Score = 31.9 bits (69), Expect = 0.61
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 370 PTNCGQYRTCVG-GRAFDMVCPPGLAFNPDFSRCDWADLVPSCD 498
P NC ++ C +AF CP GL ++ + CDW V CD
Sbjct: 126 PRNCSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWPRYV-DCD 168
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Frame = +2
Query: 134 NGYYKTDANCDTYIECRDY-QATNMICPDGLHFN---PSVEWPAFL 259
NG+Y NC + +C + +A CP GL ++ + +WP ++
Sbjct: 120 NGHYHDPRNCSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWPRYV 165
>SB_27119| Best HMM Match : CBM_14 (HMM E-Value=4.1e-15)
Length = 220
Score = 31.9 bits (69), Expect = 0.61
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 370 PTNCGQYRTCVG-GRAFDMVCPPGLAFNPDFSRCDWADLVPSCD 498
P NC ++ C +AF CP GL ++ + CDW V CD
Sbjct: 33 PRNCSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWPRYV-DCD 75
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = +2
Query: 95 AAATAQNVICKARNGYYKTDANCDTYIECRDY-QATNMICPDGLHFN---PSVEWPAFL 259
A AT NG+Y NC + +C + +A CP GL ++ + +WP ++
Sbjct: 14 ALATDATYCLSLPNGHYHDPRNCSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWPRYV 72
>SB_52309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 386
Score = 31.5 bits (68), Expect = 0.81
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 122 CKARNGYYKTDANCDTYIECRDYQATNMICPDGLHFN 232
C ++G+Y A+CD ECRD A++ P + +N
Sbjct: 164 CTCKSGFYGNGASCDDIDECRD--ASHKCSPHAICYN 198
>SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 31.5 bits (68), Expect = 0.81
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Frame = +2
Query: 38 ALLHLPRLASGCKHVQSTPAAATAQNVICKAR-NGYYKTDAN-CDTYIECRDYQATNMIC 211
AL L L +G + + A + CK + +G Y+ + C +I C +Y A+ C
Sbjct: 50 ALTLLVLLVTGA--ICTVTVTADIHDDFCKYKPDGEYRDPYDACRGFIHCHNYNASYKPC 107
Query: 212 PDGLHFNPSV---EWP 250
P GL +N +WP
Sbjct: 108 PGGLLYNEKTKQCDWP 123
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Frame = -3
Query: 548 DSIQRSRGASETQDFSASQEGTRSAQSQRL----KSGLNASP 435
DS ++ R S + SAS+EGTR A+ RL KS +ASP
Sbjct: 1923 DSSKKKRKRSPSPPTSASREGTRKAKRPRLTDSAKSSRSASP 1964
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -3
Query: 548 DSIQRSRGASETQDFSASQEGTRSAQSQRLKSGLNAS 438
DS ++ R S + SAS+EGTR A+ RL +S
Sbjct: 1814 DSSKKKRKRSPSPATSASREGTRKAKRPRLTDSAKSS 1850
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +1
Query: 373 TNCGQYRTCVGGRAFDMVCPPG 438
T C R CV G AF + CPPG
Sbjct: 2876 TPCPAGRYCVNGTAFGVPCPPG 2897
>SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2641
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = +1
Query: 325 DCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRC 468
DCP G F P ++ G+Y C G M CP + + D C
Sbjct: 2178 DCPTSDGFFPDPASN----GRYIHCSGNSPEIMSCPDKMTWQNDIKSC 2221
>SB_26480| Best HMM Match : EGF (HMM E-Value=0)
Length = 1772
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +2
Query: 56 RLASGCKHVQSTPAAATAQNVICKARNG-YYKTDANCDTYIECRDYQATNMICPDGLHFN 232
R AS C V +A + G Y+ NCD+ +E + Q + CP G H +
Sbjct: 274 RYASQCVQVYQPVCSAVMCKPLPSVNIGNYHPPSLNCDS-VEQKFDQVCSHRCPSGYHMS 332
Query: 233 P 235
P
Sbjct: 333 P 333
>SB_8869| Best HMM Match : Keratin_B2 (HMM E-Value=0.35)
Length = 674
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Frame = +1
Query: 265 YPVEVTCVGRGSIQPAQTTPDCPHQ-YGIFK----HPNASPTNCGQYRTCVGGRAFD 420
Y V +C GR + + T C + Y K +PN P G Y +C G + +D
Sbjct: 35 YGVYTSCCGRQTYDNRRNTSCCRYTPYNRLKQICCYPNILPRRYGVYTSCCGRQTYD 91
>SB_43576| Best HMM Match : EGF_CA (HMM E-Value=2.7e-38)
Length = 641
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 639 SCDIGLAFDPTTGRCVDAD 695
SCD GLA+D +C+D D
Sbjct: 338 SCDTGLAWDEKKRKCIDVD 356
>SB_25369| Best HMM Match : HEAT (HMM E-Value=3.9e-05)
Length = 415
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2
Query: 14 IRYSKKKDALLHLPRLASGCKHVQSTPAAATA-QNVICKARNGY 142
+R ++K+ + L LASGC H ++T AA+ +I K G+
Sbjct: 89 VRIPRQKELVPRLQVLASGCNHRKTTVAASKCLGGIINKMAQGH 132
>SB_38887| Best HMM Match : EGF_CA (HMM E-Value=6.2e-31)
Length = 131
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 639 SCDIGLAFDPTTGRCVDAD 695
SCD GLA+D +C+D D
Sbjct: 29 SCDTGLAWDEKKRKCIDVD 47
>SB_16860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 691
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/48 (25%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = -1
Query: 295 LFLHMSLQLDNRKECRPF--HARIKVQTIRAYHVSSLIVPAFNVCITI 158
L+L + LD+R + RPF H +++++++ + ++ AF C +
Sbjct: 287 LYLGVCSDLDHRSDIRPFLEHRGVQLESLQLCNTGNISANAFESCCNL 334
>SB_48964| Best HMM Match : TRAP_240kDa (HMM E-Value=0)
Length = 1227
Score = 27.9 bits (59), Expect = 10.0
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = -2
Query: 780 IFEKTTISS-N*FIYDSCHLCFALHC 706
I KT++ S + I DSC +C ALHC
Sbjct: 680 ILSKTSVVSLDPVIRDSCKVCHALHC 705
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 27.9 bits (59), Expect = 10.0
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -1
Query: 316 FGQAGCSLFLHMSLQLDNRKECRPFHA-RIKVQTI 215
FG++G H +L+NR++ R HA R+K++ I
Sbjct: 155 FGKSGVKPTYHSQSRLENRRKVRFLHATRVKMEKI 189
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,593,990
Number of Sequences: 59808
Number of extensions: 660864
Number of successful extensions: 1850
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1849
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2179815638
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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