Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0650
         (702 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    24   1.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.2  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   7.4  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   9.7  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -3

Query: 535 CNCTFNYYSKQIKCIKV 485
           CN TF++YSK++   K+
Sbjct: 220 CNLTFSWYSKKVFYSKI 236


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 11/43 (25%), Positives = 22/43 (51%)
 Frame = +2

Query: 338 FYFITYLYLMFKRVL**VYLLKPICIF*NEFFLVYFYIHVLLL 466
           +YF +   +    +L    L+  +CI+   +  + F +H+LLL
Sbjct: 213 YYFYSAFIIFTIHLLFYCVLIILLCIYYFYYAFILFTVHLLLL 255


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 261 NSLNYNKIQNKTYMIKPLLI 320
           +S+   K++NK   +KPLLI
Sbjct: 92  DSVKNCKLKNKERKVKPLLI 111


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -2

Query: 200 PKRYRLQRRRAPYQCPSCEQ 141
           P+  R    RA   CP+C++
Sbjct: 279 PRSQRRYTGRATCDCPNCQE 298


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,600
Number of Sequences: 336
Number of extensions: 3091
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)