Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0405
(723 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_5548| Best HMM Match : PT (HMM E-Value=3.1) 36 0.033
SB_29636| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.077
SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032) 33 0.31
SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8) 32 0.41
SB_12462| Best HMM Match : Kinesin (HMM E-Value=0) 32 0.41
SB_53502| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.54
SB_10354| Best HMM Match : AT_hook (HMM E-Value=0.045) 32 0.54
SB_56336| Best HMM Match : Ag332 (HMM E-Value=5.1) 31 0.95
SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.95
SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.95
SB_20305| Best HMM Match : PT (HMM E-Value=1.8) 31 0.95
SB_39938| Best HMM Match : ANF_receptor (HMM E-Value=6.4e-14) 30 1.7
SB_32573| Best HMM Match : His_leader (HMM E-Value=0.0014) 30 1.7
SB_56912| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89) 30 2.2
SB_52882| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_44922| Best HMM Match : RNA_pol_Rpb1_1 (HMM E-Value=0) 29 2.9
SB_18220| Best HMM Match : Vicilin_N (HMM E-Value=4.3) 29 2.9
SB_38155| Best HMM Match : DUF414 (HMM E-Value=4.4) 29 3.8
SB_37780| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_4344| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 3.8
SB_4288| Best HMM Match : DUF1165 (HMM E-Value=2.8) 29 3.8
SB_16871| Best HMM Match : DUF1168 (HMM E-Value=9.9) 29 3.8
SB_43190| Best HMM Match : GKAP (HMM E-Value=1.6e-09) 29 5.0
SB_8110| Best HMM Match : AAA (HMM E-Value=0.0032) 29 5.0
SB_4239| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_57515| Best HMM Match : CBFNT (HMM E-Value=3.3) 29 5.0
SB_34096| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_26913| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_59196| Best HMM Match : DUF593 (HMM E-Value=1.7) 28 6.7
SB_49350| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 28 6.7
SB_38269| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_38133| Best HMM Match : TolA (HMM E-Value=0.38) 28 6.7
SB_38061| Best HMM Match : DUF995 (HMM E-Value=4) 28 6.7
SB_26881| Best HMM Match : Atrophin-1 (HMM E-Value=0.86) 28 6.7
SB_24914| Best HMM Match : Nuc_sug_transp (HMM E-Value=3.6e-15) 28 6.7
SB_34673| Best HMM Match : UK (HMM E-Value=0.6) 28 6.7
SB_24428| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_12548| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_9702| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_5549| Best HMM Match : PT (HMM E-Value=1.9) 28 6.7
SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098) 28 8.8
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 28 8.8
>SB_5548| Best HMM Match : PT (HMM E-Value=3.1)
Length = 157
Score = 35.9 bits (79), Expect = 0.033
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 123 PEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAE 254
PE+ T +P++ PV+K P K E E+ ++ PED P +
Sbjct: 70 PEDRTEYKPEDKPVEKKPEGKPENQPEKKPEDKPEDKPEDKPED 113
Score = 31.5 bits (68), Expect = 0.72
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +3
Query: 111 KEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAE 254
++ +P+ T PK SP K+ K+ N E+ T+ PED P E
Sbjct: 39 RKTSPKTSPKTSPKTSP--KTSQKQAGRQAGNKPEDRTEYKPEDKPVE 84
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +3
Query: 93 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPE 239
D DK+E PE+ +P+ P K + E E ++N D+ E
Sbjct: 109 DKPEDKQEDKPEDKQEDKPEAKPEDKPEDEPEEKPEDQPEDNNEDKPGE 157
>SB_29636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 34.7 bits (76), Expect = 0.077
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 108 KKEVAPEEVTSTEPKESPVKKSPAKKVEA-AESNGKENGTDEAPEDSPAEMVMPKK 272
K E APEEV + + +ESP ++ K+ +A E KE +E ED+ E PKK
Sbjct: 242 KVEDAPEEVEAPKEEESPKEEDTPKEEDAPKEDTPKEEAKEEPKEDTKEE---PKK 294
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = +3
Query: 90 ADAAVDKKEVAPEEVTSTEPKESPVKKS----PAKKVEAAESNGKENGTDEAPEDSPAE 254
A+ +K E PEE E KE ++ P + EAAE G GT++ PED +E
Sbjct: 33 AEKQPEKVEDKPEEPAKDEEKEEAATEAEAEDPKEDPEAAEIPG---GTEDLPEDEYSE 88
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +3
Query: 105 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAP--EDSPAEMVMPKKAT 278
+K P+E +E+P +++P KVE A + +E+P ED+P E PK+ T
Sbjct: 218 NKTPEEPKEDEKVTEEETPKEETP--KVEDAPEEVEAPKEEESPKEEDTPKEEDAPKEDT 275
>SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032)
Length = 521
Score = 32.7 bits (71), Expect = 0.31
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +3
Query: 93 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAE 254
D DK++ PE+ +P++ P K P K E + N + ++ PED P +
Sbjct: 433 DKPEDKQQNKPEDKPEDKPEDKPEDK-PEDKPEDKQQNKPKYKPEDKPEDKPED 485
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 7/61 (11%)
Frame = +3
Query: 93 DAAVDKKEVAPEEVTSTEPKESPVKK-------SPAKKVEAAESNGKENGTDEAPEDSPA 251
D DK E PE+ +PK P K P K+E + E + + PED P
Sbjct: 453 DKPEDKPEDKPEDKQQNKPKYKPEDKPEDKPEDKPKDKLEDRPEDKPEEKSKDNPEDKPE 512
Query: 252 E 254
+
Sbjct: 513 D 513
>SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8)
Length = 360
Score = 32.3 bits (70), Expect = 0.41
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 93 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAE 254
D DK E PEE +P+E P + +P K E + + E+ ++ PE P +
Sbjct: 304 DKLEDKPEDRPEEKPEDKPEEKP-EDNPEDKPEYKQEDKPEDKQEDKPECKPED 356
>SB_12462| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 803
Score = 32.3 bits (70), Expect = 0.41
Identities = 22/71 (30%), Positives = 35/71 (49%)
Frame = +3
Query: 105 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEMVMPKKATMH 284
D++ VA + V+S P+ A + S G NG+ EAPE+ +MV +K
Sbjct: 459 DEEGVAAQGVSSVTPEAGSALSVIALEERGRSSTGSPNGSLEAPEELQEKMVGGEKKG-- 516
Query: 285 LRTVMPQKRKR 317
T + +KRK+
Sbjct: 517 -DTKLKEKRKQ 526
>SB_53502| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 31.9 bits (69), Expect = 0.54
Identities = 16/59 (27%), Positives = 25/59 (42%)
Frame = +3
Query: 78 LATMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAE 254
+ MAD E P E T T E+ K+P+ E E G+E + +++ E
Sbjct: 32 IQNMADEEGKATEATPPEATETPAAEAAPAKAPSADAEVQEEAGEETASATQADEATTE 90
>SB_10354| Best HMM Match : AT_hook (HMM E-Value=0.045)
Length = 191
Score = 31.9 bits (69), Expect = 0.54
Identities = 25/78 (32%), Positives = 36/78 (46%)
Frame = +3
Query: 81 ATMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEMV 260
A A+A +KK APEE + + K+ V++S K A +G+ N D+
Sbjct: 58 AKAAEAQPEKKAEAPEEKPAEDSKDQAVEESETKD---ASKDGEGNAADKRARG------ 108
Query: 261 MPKKATMHLRTVMPQKRK 314
PKKA T P+K K
Sbjct: 109 RPKKADGEPATKKPKKVK 126
>SB_56336| Best HMM Match : Ag332 (HMM E-Value=5.1)
Length = 366
Score = 31.1 bits (67), Expect = 0.95
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 105 DKKEVAPEEVTSTEP-KESPVKKSPAKKVEAAESNGKENGTDEAPE 239
D+KE EE+ EP KE PV++ ++ E +E DE P+
Sbjct: 245 DEKEREQEELVEEEPKKEEPVEEETKQEEPVEEEPKQEEAVDEEPK 290
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +3
Query: 108 KKEVAPEEVTSTEPK-ESPVKKSPAKKVEAAESNGKENGTDEAP-EDSPAEMVMPKK 272
++E EE EPK E PV++ P ++ E +E +E P ++ P E PK+
Sbjct: 32 EEEPKQEEQVEEEPKQEEPVEEEPKQEEPVKEEPKQEEPVEEEPKQEEPVEQ-KPKQ 87
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 108 KKEVAPEEVTSTEPK-ESPVKKSPAKKVEAAESNGKENGTDEAP-EDSPAE 254
++E EE EPK E PVK+ P ++ E +E ++ P ++ P E
Sbjct: 42 EEEPKQEEPVEEEPKQEEPVKEEPKQEEPVEEEPKQEEPVEQKPKQEEPVE 92
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 102 VDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAP-EDSPAE 254
V+++ E V + +E PVK+ P ++ + E E +E P ++ P E
Sbjct: 91 VEEEPKQEEPVEEEQKQEEPVKEEPKQEGQVEEEPKLEEPVEEEPKQEEPVE 142
>SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 31.1 bits (67), Expect = 0.95
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +3
Query: 105 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEM 257
+KKE +E TE S KSPA K + S N +D++P S E+
Sbjct: 523 EKKEDEGKEPDKTEQTTSAKSKSPASKDGKSRSQKGSNSSDDSPVKSLDEI 573
>SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1438
Score = 31.1 bits (67), Expect = 0.95
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 9/84 (10%)
Frame = +3
Query: 90 ADAAVDKKEVAPEE-VTSTEPKESPVKKSPAKKVEAAESNGKENGTD--------EAPED 242
+D ++ E+A EE VTS E E V PA+KVEA+ +E G + EAPE+
Sbjct: 823 SDVPTEEAEMATEEAVTSVEEAEDKV---PAEKVEASIEEAEEPGEEVESLLKEAEAPEE 879
Query: 243 SPAEMVMPKKATMHLRTVMPQKRK 314
+ V +A + ++ K
Sbjct: 880 EVGDQVEEVEAPVEKAAASVEEAK 903
>SB_20305| Best HMM Match : PT (HMM E-Value=1.8)
Length = 127
Score = 31.1 bits (67), Expect = 0.95
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = +3
Query: 87 MADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEMVMP 266
M D DK E PE+ +PK+ KS K + E N E+ ++ P D P +
Sbjct: 1 MEDKPEDKPEDKPEDKPEGKPKDKSEDKSGDKPQDKPE-NKPEDQPEDKPGDKPEDKTED 59
Query: 267 K 269
K
Sbjct: 60 K 60
>SB_39938| Best HMM Match : ANF_receptor (HMM E-Value=6.4e-14)
Length = 966
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +3
Query: 114 EVAPEEVTST--EPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAE 254
EV PEEV + K +PV+ P + E S E E PE P+E
Sbjct: 725 EVVPEEVEVDVKQTKSTPVESEPTETPEVVPSEKLEGIQAEVPEVMPSE 773
>SB_32573| Best HMM Match : His_leader (HMM E-Value=0.0014)
Length = 134
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = -2
Query: 383 SSREWSFLLFLHQEPQISSSHQSLSFLWHHRSQMHRCFLRHHH 255
SS ++ H P SSS S+ + HH + HHH
Sbjct: 76 SSSSSIIIIIHHHHPSSSSSSSSIIIIHHHHPSSSSIIIIHHH 118
>SB_56912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 443
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 183 KVEAAESNGKENGTDEAPEDSPA 251
K E +E+NG ENG +EA E+ PA
Sbjct: 313 KNEDSEANGDENGHNEASEEKPA 335
>SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89)
Length = 1494
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = -3
Query: 256 ISAGESSGASSVPFSLPLLSAASTFLAGDFLTGDSFGSVEVTSSGATSFLSTAASAI 86
+++ S P SLP S+ L DFLT S S +TSS + S T++S++
Sbjct: 458 LTSSSSLSVFPTPSSLPSDFLTSSSLPSDFLTSSSSLSDFLTSSSSLSDFLTSSSSL 514
Score = 28.7 bits (61), Expect = 5.0
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = -3
Query: 241 SSGASSVPFSLPLLSAASTFLAGDFLTGDSFGSVEVTSSGATSFLSTAASAI 86
SS S SLP S+ L DFLT S S +TSS + S T++S++
Sbjct: 708 SSSLSDFLTSLPSDFLTSSSLPSDFLTSSSSLSDFLTSSSSLSDFLTSSSSL 759
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -3
Query: 208 PLLSAASTFLAGDFLTGDSFGSVEVTSSGATS-FLSTAAS 92
P+ FL DFLT S S +TSS + S FLS ++S
Sbjct: 304 PISEQQGIFLPSDFLTSSSLPSDFLTSSSSLSDFLSLSSS 343
>SB_52882| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1413
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 90 ADAAVDKKEVAPEEVTSTEPKESPVKKSPA-KKVEAAESNGKENGTDEAPED 242
A AVDK+E P+ E K + SPA KVE + + G+ ED
Sbjct: 104 APQAVDKEEEKPQAADKEEEKSQKEESSPATDKVEPKPAPSEAEGSSLGGED 155
>SB_44922| Best HMM Match : RNA_pol_Rpb1_1 (HMM E-Value=0)
Length = 1596
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 257 GDAEESNDASENGDATEKKETG 322
G A E+ +ASE G+A+E ETG
Sbjct: 42 GKASEAGEASETGEASEASETG 63
>SB_18220| Best HMM Match : Vicilin_N (HMM E-Value=4.3)
Length = 188
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +3
Query: 87 MADAAVDKKEVAPEEVTSTEPKESPVKKSPAKK--VEAAESNGKENGTDEAPEDSPAEMV 260
M VD E+ E + +ESP K AKK + E+ G++ PED E +
Sbjct: 1 MESRKVDSLELIESENCEDKQRESPSTKRKAKKDAKKCKETQGEKELGRNTPEDDSEETL 60
Query: 261 MPKK 272
KK
Sbjct: 61 GMKK 64
>SB_38155| Best HMM Match : DUF414 (HMM E-Value=4.4)
Length = 361
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +3
Query: 108 KKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEMVMP--KKATM 281
KK+ + ++T PK+ V + +K AE E + + E SP+ + P KK+T
Sbjct: 295 KKDPTHHKRSTTLPKDLKVHTTAQEKKSVAEDTILEGSEEGSSESSPSSVSSPINKKSTE 354
Query: 282 HLRTVM 299
VM
Sbjct: 355 RKEDVM 360
>SB_37780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 164
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +3
Query: 105 DKKEVAPEEVTSTEPKESPVK--KSPAKKVEAAESNGKEN 218
D + AP VTS+ P + P+K K+ + +AA SN + N
Sbjct: 116 DVTQSAPTRVTSSLPSKQPIKSSKTSRSQTKAAPSNARLN 155
>SB_4344| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1080
Score = 29.1 bits (62), Expect = 3.8
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +3
Query: 87 MADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAES-NGKENGTDE--APEDSPAEM 257
MA+ VDK+ E + + ++ KK AKK E ++ G ++G DE ED P +
Sbjct: 620 MAEKEVDKEGDKESEKSEKDGEKGDEKKDDAKKQEDEDAEEGADDGYDEYYYDEDEPLQC 679
Query: 258 VMPKK 272
+ K+
Sbjct: 680 EVCKE 684
>SB_4288| Best HMM Match : DUF1165 (HMM E-Value=2.8)
Length = 162
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +3
Query: 126 EEVTSTEPKESPVKKSP---AKKVEAAESNGKENGTDEAPE 239
E+V S+ PK+ +K P KK EA E +E DE E
Sbjct: 115 EKVASSSPKKREPRKKPKAGKKKEEAVEEESEEESMDEKNE 155
>SB_16871| Best HMM Match : DUF1168 (HMM E-Value=9.9)
Length = 100
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +3
Query: 126 EEVTSTEPKESPVKKSP---AKKVEAAESNGKENGTDEAPE 239
E+V S+ PK+ +K P KK EA E +E DE E
Sbjct: 53 EKVASSSPKKREPRKKPKAGKKKEEAVEEESEEESMDEKNE 93
>SB_43190| Best HMM Match : GKAP (HMM E-Value=1.6e-09)
Length = 816
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 129 EVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEMVMPKKA 275
E T EPK +P+++S K+ +GK G ED E+V K+A
Sbjct: 719 EGTPVEPKGTPLRRSSRKRQLTPYHSGK--GKSRLGEDHAEELVPAKQA 765
>SB_8110| Best HMM Match : AAA (HMM E-Value=0.0032)
Length = 1199
Score = 28.7 bits (61), Expect = 5.0
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +3
Query: 126 EEVTSTEPKESPVKKSPAKKVEAAESNGKENGTD-EAPEDSPAEMVMPKK-ATMHLRTVM 299
EEV + ++ KK +KK E ++ K TD EA + + ++P+K A + L+
Sbjct: 101 EEVDTESERDEKEKKKRSKKKEKEGTSLKNPLTDQEARTQNNTQTIIPQKLAPIFLQRPK 160
Query: 300 PQK 308
PQK
Sbjct: 161 PQK 163
>SB_4239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 6/52 (11%)
Frame = -2
Query: 329 SSHQSLSFLWHHRSQMHRCFLRHHH-----FSRRIFWGFIGTILFAI-TFCS 192
S+H + H++ H RHH S I WG I I + I T CS
Sbjct: 43 SAHHDSGYYSSHQNDYHHGHKRHHRRSSGWLSSLIMWGIIAAIAYYIYTSCS 94
>SB_57515| Best HMM Match : CBFNT (HMM E-Value=3.3)
Length = 213
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = +3
Query: 111 KEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEMVMPKKATMHLR 290
K+ A E + + K+ VE E G+E +EA E++PAE+ K+ R
Sbjct: 144 KDKAGSETSLNAADDEETKEKTEIAVEE-EKEGEEFKREEAAEETPAEVADGKEKKQRRR 202
Query: 291 TVMPQKRKR 317
K+K+
Sbjct: 203 RFSFSKKKK 211
>SB_34096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1430
Score = 28.7 bits (61), Expect = 5.0
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +3
Query: 126 EEVTSTEPKESPVKKSPAKKVEAAESNGKENGTD-EAPEDSPAEMVMPKK-ATMHLRTVM 299
EEV + ++ KK +KK E ++ K TD EA + + ++P+K A + L+
Sbjct: 1148 EEVDTESERDEKEKKKRSKKKEKEGTSLKNPLTDQEARTQNNTQTIIPQKLAPIFLQRPK 1207
Query: 300 PQK 308
PQK
Sbjct: 1208 PQK 1210
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 28.7 bits (61), Expect = 5.0
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +3
Query: 117 VAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPA-EMVMPKKATMHLRT 293
VAPE + E +PV +A E+ K T APE + A E + + TM T
Sbjct: 4634 VAPETTMAPETTAAPVSTVALVTTKAPETT-KAPETTVAPESTMAPETTVAPETTMAPET 4692
Query: 294 VMPQK 308
+PQ+
Sbjct: 4693 TIPQE 4697
>SB_26913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +3
Query: 123 PEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSP 248
PE+ T + ++ P K+P + AAE +GKEN A +D+P
Sbjct: 79 PEDSTKKKRRKKP--KTPTRASAAAEESGKENEAFVA-DDTP 117
>SB_59196| Best HMM Match : DUF593 (HMM E-Value=1.7)
Length = 1376
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 108 KKEVAPEEVTST--EPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSP 248
K + E+ T++ EP + PVK+ P K V KEN ++P+++P
Sbjct: 1150 KMQKTEEKTTASKSEPAQEPVKQPPVKDV-------KENSLPQSPQETP 1191
>SB_49350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 998
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = +3
Query: 111 KEVAPEEVTSTEPKESPVKKSP-AKKVEAAESNGKENGTDEAP---EDSPAEMVMP 266
++++ EEV K + + P +KK E + GK+ G D P + P E V P
Sbjct: 901 EDISQEEVEKRTRKPTIQEPKPDSKKSERKDKKGKDKGADHTPASGDGLPVEKVDP 956
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 132 VTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAE 254
+ S ++S VKKS +K + + ++ + PED PAE
Sbjct: 64 IPSDHKRKSFVKKSASKSKKKRKKRKQQGDEESEPEDIPAE 104
>SB_38269| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 28.3 bits (60), Expect = 6.7
Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Frame = -3
Query: 346 KSHRFPLHTSLFLFCGITVLRCIVAFFGITISAGESSGASSVPFSL-PLLSAASTFLAGD 170
K HRF L + CG+ +L + A I+ + + ++ + A F
Sbjct: 285 KEHRFALQLVSLIGCGVALLCFVAALLAFHITGKDRHRRKTETMTIHKHFAIAQIFALTL 344
Query: 169 FLTGDSFGSVEVTSSGATSFLSTAASAIVA 80
FL ++ +V++ S A S L + +VA
Sbjct: 345 FLV--AYVAVDIYMSNACSLLVVTPAVVVA 372
>SB_38133| Best HMM Match : TolA (HMM E-Value=0.38)
Length = 2114
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 108 KKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAE 254
KKE E+ + +E+ ++ KK E E + K+N +E ED E
Sbjct: 1880 KKENEEEDDKKEKKEENEEEEKKKKKKENEEEDDKKNNKEENEEDEKKE 1928
>SB_38061| Best HMM Match : DUF995 (HMM E-Value=4)
Length = 220
Score = 28.3 bits (60), Expect = 6.7
Identities = 21/77 (27%), Positives = 27/77 (35%)
Frame = +3
Query: 84 TMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEMVM 263
T A V E P V + E E S + E E E+ E +D P
Sbjct: 88 TDASTTVPLYEATPT-VANMEKNEHDGNSSDSGNSEVTEQEHDEDANSEENDDKPTRKTK 146
Query: 264 PKKATMHLRTVMPQKRK 314
KA L + QK+K
Sbjct: 147 LDKAQRKLNKRLRQKKK 163
>SB_26881| Best HMM Match : Atrophin-1 (HMM E-Value=0.86)
Length = 1110
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/57 (29%), Positives = 23/57 (40%)
Frame = +3
Query: 147 PKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEMVMPKKATMHLRTVMPQKRKR 317
P+ SP+ +EAA SN N D P P ++ T P+ RKR
Sbjct: 450 PRYFSYSSSPSSLLEAASSNVGRNMRDTGTSPVPFHQDPPSLSSSGQGTFQPKVRKR 506
>SB_24914| Best HMM Match : Nuc_sug_transp (HMM E-Value=3.6e-15)
Length = 979
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +2
Query: 257 GDAEESNDASENGDATEKKETGV 325
G+A E+ +ASE G+A+E E GV
Sbjct: 771 GEASEAGEASEVGEASEAGENGV 793
>SB_34673| Best HMM Match : UK (HMM E-Value=0.6)
Length = 641
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +3
Query: 123 PEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEMVMPKK 272
PEE T + V +P + EA ++ + T++APE S P K
Sbjct: 115 PEETTDVPDRPQEVTTTPDRPQEANDAPDRPQETNDAPERSHEVTNTPDK 164
>SB_24428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 532
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 356 FLHQEPQISSSHQSLSFLWHHRSQMHRCF 270
FL + ISSS + LW +RS+ HR F
Sbjct: 398 FLKESGWISSSRFCVVHLWRNRSERHRFF 426
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 28.3 bits (60), Expect = 6.7
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Frame = +3
Query: 93 DAAVDKKEVAPEEVTSTEPKESPVKKSPA---KKVEAAESNGKENGTD-EAPEDSPAEMV 260
D+ V + ++P + KE P +KSP K A S K N ++ E+ DSP E
Sbjct: 750 DSPVRQPSLSPSP-SPERKKEDPKEKSPPLPKSKKMANRSYRKHNSSESESDSDSPPERK 808
Query: 261 MPKKATMHLRTVMPQKRKR 317
+ R P +R+R
Sbjct: 809 KGSVSPRDQRRRSPMRRRR 827
>SB_12548| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.3 bits (60), Expect = 6.7
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +3
Query: 114 EVAPEEVTSTEPKESPVKKS---PAKKVEAAESNGKENGTDEAPEDSPAEMVMPKKATMH 284
EV+ EV S EP+E+P + PA E ++G + TDE + E P K +
Sbjct: 203 EVSSPEVRSPEPEETPPEPEIIIPAPDFEGFANDGYD--TDEELDKYLGENEAPAKNPVS 260
Query: 285 LRTVMPQKRKRL 320
++P+ + R+
Sbjct: 261 EVPIIPKTKTRV 272
>SB_9702| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 708
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 270 SSASPFQQANLLGLHRYHSLCHY 202
SS+SP ++ HRYH LCH+
Sbjct: 97 SSSSPPLSSSSQSSHRYHPLCHH 119
>SB_5549| Best HMM Match : PT (HMM E-Value=1.9)
Length = 282
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +3
Query: 93 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEMVMPKK 272
D D E PE +P++ P +K P KK E + E+ + PED + KK
Sbjct: 186 DMPEDMPEDKPEYRPEYKPEDKP-EKKPEKKPEDKSEDKPEDKHKDKPEDKLEDKPEDKK 244
>SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098)
Length = 1177
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 275 NDASENGDATEKKETGVKRKSV 340
+D SEN DAT+ ETG K + V
Sbjct: 738 SDQSENNDATDGSETGDKNQEV 759
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 27.9 bits (59), Expect = 8.8
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +3
Query: 102 VDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEMVMPKKATM 281
+ +KE EEV + K + + P K+ E ++A E+ P E + +K
Sbjct: 6207 IARKEKKVEEVKPKKEKPTEREAKPLKEKPLVEEKELTVSVEKAVEEKPLEKPIARK-EK 6265
Query: 282 HLRTVMPQKRK 314
+ V P+K K
Sbjct: 6266 KVEKVKPKKEK 6276
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,455,072
Number of Sequences: 59808
Number of extensions: 371677
Number of successful extensions: 1715
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1687
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1925890720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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