Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3792
         (471 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       24   0.94 
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    21   8.8  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    21   8.8  
DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    21   8.8  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    21   8.8  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    21   8.8  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    21   8.8  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    21   8.8  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    21   8.8  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    21   8.8  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    21   8.8  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    21   8.8  

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 69  VPLGPRMRILKEAGIHQELHHLSR 140
           VPLG R  ++  A    E+ HL+R
Sbjct: 378 VPLGERQTLMFSATFPDEVQHLAR 401


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 327 NAYRRKPPLS 356
           NAYR +PPL+
Sbjct: 172 NAYRLRPPLN 181


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 327 NAYRRKPPLS 356
           NAYR +PPL+
Sbjct: 172 NAYRLRPPLN 181


>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 327 NAYRRKPPLS 356
           NAYR +PPL+
Sbjct: 157 NAYRLRPPLN 166


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 327 NAYRRKPPLS 356
           NAYR +PPL+
Sbjct: 157 NAYRLRPPLN 166


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 327 NAYRRKPPLS 356
           NAYR +PPL+
Sbjct: 157 NAYRLRPPLN 166


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 327 NAYRRKPPLS 356
           NAYR +PPL+
Sbjct: 157 NAYRLRPPLN 166


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 327 NAYRRKPPLS 356
           NAYR +PPL+
Sbjct: 157 NAYRLRPPLN 166


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 327 NAYRRKPPLS 356
           NAYR +PPL+
Sbjct: 157 NAYRLRPPLN 166


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 327 NAYRRKPPLS 356
           NAYR +PPL+
Sbjct: 169 NAYRLRPPLN 178


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 327 NAYRRKPPLS 356
           NAYR +PPL+
Sbjct: 169 NAYRLRPPLN 178


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 327 NAYRRKPPLS 356
           NAYR +PPL+
Sbjct: 397 NAYRLRPPLN 406


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,998
Number of Sequences: 438
Number of extensions: 2603
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12682287
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)