Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3748
         (688 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    23   2.7  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.7  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            23   2.7  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   3.6  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   4.8  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   4.8  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   6.3  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   6.3  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    22   6.3  

>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 133 VPTVYLTALLNFYPSNSS 186
           VP++YLT   N  P+N S
Sbjct: 42  VPSIYLTYAKNILPNNIS 59


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3

Query: 534  KAFDKVWHNGLIFKLFRWG 590
            KA+ KV  N +IF++++ G
Sbjct: 1542 KAYQKVEENEIIFEIYKMG 1560


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 619 YGTSCRTALFDIESREPAPPHD 684
           +GT    + FD +S++  PP+D
Sbjct: 338 FGTPRIMSSFDFQSKDQGPPND 359


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 554 PDFVERFCDVEEESSRV*RFW 492
           PD   R  DV EE   + +FW
Sbjct: 199 PDLNYRNSDVREEMKNIMKFW 219


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -3

Query: 623 PYDEHETIPAPPPSE 579
           PY++  T+ +PPP++
Sbjct: 894 PYNQRGTVVSPPPTK 908


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -3

Query: 623 PYDEHETIPAPPPSE 579
           PY++  T+ +PPP++
Sbjct: 932 PYNQRGTVVSPPPTK 946


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/32 (21%), Positives = 15/32 (46%)
 Frame = -1

Query: 595 HRPHLNSLKIKPLCQTLSNAFATSKKRAPVYN 500
           HRP    +K+ P+ + + + +   +     YN
Sbjct: 148 HRPDTKLMKLPPMYEVMPHLYFNDEVMQKAYN 179


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/32 (21%), Positives = 15/32 (46%)
 Frame = -1

Query: 595 HRPHLNSLKIKPLCQTLSNAFATSKKRAPVYN 500
           HRP    +K+ P+ + + + +   +     YN
Sbjct: 148 HRPDTKLMKLPPMYEVMPHLYFNDEVMQKAYN 179


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 11/38 (28%), Positives = 15/38 (39%)
 Frame = -3

Query: 668 GSLDSISKRAVRQEVPYDEHETIPAPPPSE*FENQTIV 555
           GSL  I        + YD + TI  P   +    Q I+
Sbjct: 127 GSLTGIGAAITNAAIAYDRYSTIARPLDGKLSRGQVIL 164


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,260
Number of Sequences: 438
Number of extensions: 4222
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)