Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3699
         (532 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    22   3.4  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    22   3.4  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    22   3.4  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   4.5  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   4.5  

>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 452 RFLGQKKFNIWEALPNTFD 396
           +FL + K  +W++L N +D
Sbjct: 92  KFLVENKPELWDSLANKYD 110


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 452 RFLGQKKFNIWEALPNTFD 396
           +FL + K  +W++L N +D
Sbjct: 92  KFLVENKPELWDSLANKYD 110


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 452 RFLGQKKFNIWEALPNTFD 396
           +FL + K  +W++L N +D
Sbjct: 92  KFLVENKPELWDSLANKYD 110


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 316 LSPLNI*GLSNNHTVLECTPKKEAKNSS 399
           + P N+    + ++  E TPKKE K ++
Sbjct: 772 IKPANVNKEQSPNSTKETTPKKERKTAT 799


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -3

Query: 119 LNCLIYGLMHVTTMAYIALAIH 54
           +NC I GL H   + +  +++H
Sbjct: 877 INCEIGGLQHPGAVVWFTVSLH 898


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,768
Number of Sequences: 438
Number of extensions: 2881
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14968302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)