Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3689
(746 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 vari... 54 1e-09
DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 vari... 54 1e-09
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 29 0.046
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 25 0.75
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 24 1.3
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 2.3
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 23 3.0
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 22 5.3
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 22 5.3
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 22 5.3
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 22 5.3
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 21 9.3
>DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 variant
2 precursor protein.
Length = 94
Score = 54.0 bits (124), Expect = 1e-09
Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Frame = +3
Query: 291 GKCPQNEEYKFCEP-CNRTCEN--PFPVCPAQCARGCFCKDGLVRDKDGKCVELEQC 452
GKCP NE + C+ C R C N P P+C CA GC C+ G +R+K CV +C
Sbjct: 35 GKCPSNEIFSRCDGRCQRFCPNVVPKPLCIKICAPGCVCRLGYLRNKKKVCVPRSKC 91
Score = 44.0 bits (99), Expect = 2e-06
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = +3
Query: 84 CRANERFLECG--CRKTCRN--PAPNCRAMCITGCFCEEGQVNNDNGVCVNLADC 236
C +NE F C C++ C N P P C +C GC C G + N VCV + C
Sbjct: 37 CPSNEIFSRCDGRCQRFCPNVVPKPLCIKICAPGCVCRLGYLRNKKKVCVPRSKC 91
Score = 38.7 bits (86), Expect = 6e-05
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +1
Query: 547 GTCDKTCSN--PNPVCNQTCQRGCFCQEGYVKSVHGSCV 657
G C + C N P P+C + C GC C+ GY+++ CV
Sbjct: 48 GRCQRFCPNVVPKPLCIKICAPGCVCRLGYLRNKKKVCV 86
>DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 variant
1 precursor protein.
Length = 92
Score = 54.0 bits (124), Expect = 1e-09
Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Frame = +3
Query: 291 GKCPQNEEYKFCEP-CNRTCEN--PFPVCPAQCARGCFCKDGLVRDKDGKCVELEQC 452
GKCP NE + C+ C R C N P P+C CA GC C+ G +R+K CV +C
Sbjct: 35 GKCPSNEIFSRCDGRCQRFCPNVVPKPLCIKICAPGCVCRLGYLRNKKKVCVPRSKC 91
Score = 44.0 bits (99), Expect = 2e-06
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = +3
Query: 84 CRANERFLECG--CRKTCRN--PAPNCRAMCITGCFCEEGQVNNDNGVCVNLADC 236
C +NE F C C++ C N P P C +C GC C G + N VCV + C
Sbjct: 37 CPSNEIFSRCDGRCQRFCPNVVPKPLCIKICAPGCVCRLGYLRNKKKVCVPRSKC 91
Score = 38.7 bits (86), Expect = 6e-05
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +1
Query: 547 GTCDKTCSN--PNPVCNQTCQRGCFCQEGYVKSVHGSCV 657
G C + C N P P+C + C GC C+ GY+++ CV
Sbjct: 48 GRCQRFCPNVVPKPLCIKICAPGCVCRLGYLRNKKKVCV 86
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 29.1 bits (62), Expect = 0.046
Identities = 21/82 (25%), Positives = 29/82 (35%), Gaps = 1/82 (1%)
Frame = +3
Query: 81 LCRANER-FLECGCRKTCRNPAPNCRAMCITGCFCEEGQVNNDNGVCVNLADCPQAASAY 257
LCR F C C C A +C C GC C + N N V + +
Sbjct: 736 LCRYEAHCFALCHC---CDFDACDCEMTCPAGCKCYNDRTWNTNAVDCSGLGVEEIPRRI 792
Query: 258 KLQTTEPRFDGGKCPQNEEYKF 323
+ TE DG + + + F
Sbjct: 793 PMDATEVYLDGNVLRELQNHVF 814
Score = 22.6 bits (46), Expect = 4.0
Identities = 10/29 (34%), Positives = 11/29 (37%)
Frame = +1
Query: 532 CTRKCGTCDKTCSNPNPVCNQTCQRGCFC 618
C C CD + C TC GC C
Sbjct: 743 CFALCHCCDFDACD----CEMTCPAGCKC 767
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 25.0 bits (52), Expect = 0.75
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 525 YQVYKKVWHL*QNLQ*S*PCVQPN 596
YQ+YKKV +L Q Q S P Q N
Sbjct: 435 YQLYKKVMNLYQQYQQSLPVYQYN 458
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 24.2 bits (50), Expect = 1.3
Identities = 14/67 (20%), Positives = 20/67 (29%)
Frame = +1
Query: 406 VW*GTKTENVWNWNNAQT*NILSLEKTTNSQSLPASTAVPIKCTRKCGTCDKTCSNPNPV 585
+W V W N + + TN P T P K G C + +
Sbjct: 74 IWRNKLFVTVPRWRNGIPATLTYISLDTNRGGSPKLTPYPNWAQNKAGACGSAITTAYRI 133
Query: 586 CNQTCQR 606
+C R
Sbjct: 134 HADSCDR 140
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 23.4 bits (48), Expect = 2.3
Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 1/99 (1%)
Frame = +1
Query: 241 KPLPHTSCRQQSHASMEGNALKTRSTNSASPVTGLARIRSRC-VQRSAPEDVSVKTVW*G 417
K L + R++ S E ++ NS ++ RSR +R ++ + +
Sbjct: 266 KLLEERTSRKRYSRSREREQKSYKNENSYRKYRETSKERSRDKTERERSKERKIISSLSN 325
Query: 418 TKTENVWNWNNAQT*NILSLEKTTNSQSLPASTAVPIKC 534
N+ N+NN N + +P VPI C
Sbjct: 326 NYISNISNYNNNNNYNKKLYYNINYIEQIPVPVPVPIYC 364
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 23.0 bits (47), Expect = 3.0
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -2
Query: 382 AHCAGHTGNGFSQVLLQGSQNLYSSF*GHFPPSKRGSV 269
A+CA HT + + ++ LY++F P K +V
Sbjct: 422 AYCAAHTDSSGAMKIVNMLNQLYTAFDVLTDPKKNPNV 459
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 22.2 bits (45), Expect = 5.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3
Query: 351 SRKSCYRARRICTPRFEGIS 292
SRK R RR TPR+ +S
Sbjct: 402 SRKESGRRRRRRTPRYNSVS 421
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/24 (37%), Positives = 10/24 (41%)
Frame = +1
Query: 529 KCTRKCGTCDKTCSNPNPVCNQTC 600
K KC C SN VC + C
Sbjct: 145 KSNLKCDKCSTYQSNGEEVCLENC 168
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 22.2 bits (45), Expect = 5.3
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -2
Query: 382 AHCAGHTGNGFSQVLLQGSQNLYSSF*GHFPPSKRGSV 269
A+CA HT + + ++ LY++F P K +V
Sbjct: 422 AYCAAHTDSSGAVKIVNMLNQLYTAFDVLTDPKKNPNV 459
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3
Query: 417 DKDGKCVELEQC 452
D DGK V+L QC
Sbjct: 13 DNDGKMVDLTQC 24
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 21.4 bits (43), Expect = 9.3
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +3
Query: 18 SIFICLSLCYIV 53
S F+C+SL YI+
Sbjct: 400 SAFLCISLVYII 411
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,860
Number of Sequences: 438
Number of extensions: 5530
Number of successful extensions: 48
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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