Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3667
         (734 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    63   3e-12
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          24   1.7  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      24   1.7  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    23   3.0  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    23   3.0  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    23   3.0  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    23   3.0  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   6.9  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   6.9  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 62.9 bits (146), Expect = 3e-12
 Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 10/143 (6%)
 Frame = +1

Query: 139 QREDGLQVAYFE-AKGRG--VIATRPFSRGQYVVEYAGELIGVAEARERERLYALDPEAG 309
           QR   +Q   F  A GRG  V   +   +G +V +Y GE+I   EA +R + Y       
Sbjct: 490 QRGTKMQFCIFRTANGRGWGVKTMKTIKKGSFVTQYVGEVITNEEAEKRGKEYDAAGRTY 549

Query: 310 CYMYYFRHGDQQ--YCIDATAESGRLGRLVNHSRNGNLHTKALWVDG-----PRLVLIAA 468
            +   +   ++Q  Y +DA A  G +   +NHS + NL    +W++      P+L L A 
Sbjct: 550 LFDLDYNESEEQCPYTVDA-AIYGNISHFINHSCDPNLAVYGVWINCLDPNLPKLALFAT 608

Query: 469 QDISPGDELTYDYGDRSKESLQH 537
           +DI   +E+T+DY  +S ++ ++
Sbjct: 609 KDIKQNEEITFDYMCQSSKNSEN 631


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -1

Query: 152 PSSLCSLTALSKSLIFSAMTHFDVFLTLLLTGKNSVN 42
           P  L  ++AL K  +F     FD+F    L  KN++N
Sbjct: 102 PQLLREMSALFK--LFYHAKDFDIFFKTALWAKNNIN 136


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -1

Query: 152 PSSLCSLTALSKSLIFSAMTHFDVFLTLLLTGKNSVN 42
           P  L  ++AL K  +F     FD+F    L  KN++N
Sbjct: 102 PQLLREMSALFK--LFYHAKDFDIFFKTALWAKNNIN 136


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -1

Query: 137 SLTALSKSLIFSAMTHFDVFLTLL 66
           SLT+L+ SLIF+ +    + LTL+
Sbjct: 23  SLTSLASSLIFTILCILTLALTLV 46


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -1

Query: 137 SLTALSKSLIFSAMTHFDVFLTLL 66
           SLT+L+ SLIF+ +    + LTL+
Sbjct: 23  SLTSLASSLIFTILCILTLALTLV 46


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -1

Query: 137 SLTALSKSLIFSAMTHFDVFLTLL 66
           SLT+L+ SLIF+ +    + LTL+
Sbjct: 23  SLTSLASSLIFTILCILTLALTLV 46


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -1

Query: 137 SLTALSKSLIFSAMTHFDVFLTLL 66
           SLT+L+ SLIF+ +    + LTL+
Sbjct: 23  SLTSLASSLIFTILCILTLALTLV 46


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 591 VVHEITVDKPRSESEP 544
           V + +T D+P  E+EP
Sbjct: 262 VTNSVTCDRPSDEAEP 277


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1

Query: 215 RLNGRVAITPRPLASK*ATCNPSSLC 138
           RL   V++ P PLA   +  + SS C
Sbjct: 555 RLKSTVSLLPLPLARTPSVMSASSTC 580


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,219
Number of Sequences: 438
Number of extensions: 3787
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)