Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3624
         (757 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    26   0.44 
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    26   0.44 
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    26   0.44 

>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 25.8 bits (54), Expect = 0.44
 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
 Frame = +3

Query: 315 EYKRNIAKVAALSS-EKDVILARLDDLPSWVFFPDVERAEWLNRILLQVWPN-VNSYAKT 488
           E ++N+  V  L S E+D ++A   D PS  F    E + W    LL+  PN ++ + +T
Sbjct: 30  EERKNVDTVLVLPSIERDQMMAATFDFPSLSFEDSDEGSNWNWNTLLR--PNFLDGWYQT 87

Query: 489 L 491
           L
Sbjct: 88  L 88


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 25.8 bits (54), Expect = 0.44
 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
 Frame = +3

Query: 315 EYKRNIAKVAALSS-EKDVILARLDDLPSWVFFPDVERAEWLNRILLQVWPN-VNSYAKT 488
           E ++N+  V  L S E+D ++A   D PS  F    E + W    LL+  PN ++ + +T
Sbjct: 30  EERKNVDTVLVLPSIERDQMMAATFDFPSLSFEDSDEGSNWNWNTLLR--PNFLDGWYQT 87

Query: 489 L 491
           L
Sbjct: 88  L 88


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 25.8 bits (54), Expect = 0.44
 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
 Frame = +3

Query: 315 EYKRNIAKVAALSS-EKDVILARLDDLPSWVFFPDVERAEWLNRILLQVWPN-VNSYAKT 488
           E ++N+  V  L S E+D ++A   D PS  F    E + W    LL+  PN ++ + +T
Sbjct: 30  EERKNVDTVLVLPSIERDQMMAATFDFPSLSFEDSDEGSNWNWNTLLR--PNFLDGWYQT 87

Query: 489 L 491
           L
Sbjct: 88  L 88


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,745
Number of Sequences: 438
Number of extensions: 5062
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)